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Cmc07g0182441 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc07g0182441
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Descriptionleucine-rich repeat extensin-like protein 1
Genome locationCMiso1.1chr07:1392328..1393263
RNA-Seq ExpressionCmc07g0182441
SyntenyCmc07g0182441
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649911.1 hypothetical protein Csa_012510 [Cucumis sativus]5.8e-5888.71Show/hide
Query:  PFPGTRRILGSLGLCIVAFAFFSASSKAQMAVPSTGQLCISDCSTCPVVCTAPPPPPRSFIPAPPNFYGGYNMAPPATPSYYLWGPPPPVTNYFMGARPS
        PFPGTRRILGS GL IVAF  FSASSKAQMAVPSTGQLCISDCSTCPV+CTAPPPP     P PPNFYGG+NMAPPATPSYYLWGPPPPV NYF+GARPS
Subjt:  PFPGTRRILGSLGLCIVAFAFFSASSKAQMAVPSTGQLCISDCSTCPVVCTAPPPPPRSFIPAPPNFYGGYNMAPPATPSYYLWGPPPPVTNYFMGARPS

Query:  GEMPQTVGPRDYSYPYYYFYSSNS
        GEMPQTVGPRDYSYPYYYFYSSNS
Subjt:  GEMPQTVGPRDYSYPYYYFYSSNS

KAG6608366.1 Conserved oligomeric Golgi complex subunit 8, partial [Cucurbita argyrosperma subsp. sororia]1.9e-3765.03Show/hide
Query:  PFPGTRRILGSLGLCIVAFAFFSASSKAQMAVPSTGQLCISDCSTCPVVCTAPPPPPRSF----IPAPPNFYGGYNMAPPA-TPSYYLWGPPPPVTNYFM
        PF G      SLGL ++A A F   S AQ+ VPSTGQLCIS C TCPVVCT   P PRS+     P PP FYGGY   PPA T SY+L GPPPPV NY  
Subjt:  PFPGTRRILGSLGLCIVAFAFFSASSKAQMAVPSTGQLCISDCSTCPVVCTAPPPPPRSF----IPAPPNFYGGYNMAPPA-TPSYYLWGPPPPVTNYFM

Query:  GARPSGEMPQTVGPRDYSYPYYYFYSSNSGSFSCISKFIVLFV
        GA+PSG+MPQTVGPRDYSYPYYYFYSSN GS S  S FIVL V
Subjt:  GARPSGEMPQTVGPRDYSYPYYYFYSSNSGSFSCISKFIVLFV

XP_022940707.1 leucine-rich repeat extensin-like protein 2 [Cucurbita moschata]9.6e-3764.54Show/hide
Query:  PFPGTRRILGSLGLCIVAFAFFSASSKAQMAVPSTGQLCISDCSTCPVVCTAPPPPPRSF----IPAPPNFYGGYNMAPPA-TPSYYLWGPPPPVTNYFM
        PF G  R   SLGL ++A A F   S AQ+ VPSTGQLCIS C TCPVVCT   P PRS+     P PP FYGGY   PPA T SY+L GP PPV NY  
Subjt:  PFPGTRRILGSLGLCIVAFAFFSASSKAQMAVPSTGQLCISDCSTCPVVCTAPPPPPRSF----IPAPPNFYGGYNMAPPA-TPSYYLWGPPPPVTNYFM

Query:  GARPSGEMPQTVGPRDYSYPYYYFYSSNSGSFSCISKFIVL
        GA+PSG+MPQTVGPRDYSYPYYYFYSSN GS S    FIVL
Subjt:  GARPSGEMPQTVGPRDYSYPYYYFYSSNSGSFSCISKFIVL

XP_022981722.1 leucine-rich repeat extensin-like protein 1 [Cucurbita maxima]3.7e-4162.34Show/hide
Query:  PFPGTRRILGSLGLCIVAFAFFSASSKAQMAVPSTGQLCISDCSTCPVVCTAPPPPP-----RSFIPA----PPNFYGGYNMAPPA-TPSYYLWGPPPPV
        PF G  R   SLGLC++A A F   S AQ+ VPST QLCIS C TCPVVCT P P P      S+IP+    PP FYGGY   PPA T SY+  GPPPPV
Subjt:  PFPGTRRILGSLGLCIVAFAFFSASSKAQMAVPSTGQLCISDCSTCPVVCTAPPPPP-----RSFIPA----PPNFYGGYNMAPPA-TPSYYLWGPPPPV

Query:  TNYFMGARPSGEMPQTVGPRDYSYPYYYFYSSNSGSFSCISKFIVLFVCLLHFV
         NY  GA+PSG+MPQTVGPRDYSYPYYYFYSSN GSF+  S FI+LF C  H V
Subjt:  TNYFMGARPSGEMPQTVGPRDYSYPYYYFYSSNSGSFSCISKFIVLFVCLLHFV

XP_023523402.1 leucine-rich repeat extensin-like protein 2 [Cucurbita pepo subsp. pepo]2.8e-3666.18Show/hide
Query:  VAFAFFSASSKAQMAVPSTGQLCISDCSTCPVVCTAPPP-------PPRSFIPAPPNFYGGYNMAPPA-TPSYYLWGPPPPVTNYFMGARPSGEMPQTVG
        +A A F   S AQ+ VPSTGQLCIS C TCPVVCT P P       PP    P PP FYGGY   PPA T SY+L GPPPPV NY  GA+PSG+MPQTVG
Subjt:  VAFAFFSASSKAQMAVPSTGQLCISDCSTCPVVCTAPPP-------PPRSFIPAPPNFYGGYNMAPPA-TPSYYLWGPPPPVTNYFMGARPSGEMPQTVG

Query:  PRDYSYPYYYFYSSNSGSFSCISKFIVLFVCLLHFV
        PRDYSYPYYYFYSSN GS S  S FIVLFVC  H V
Subjt:  PRDYSYPYYYFYSSNSGSFSCISKFIVLFVCLLHFV

TrEMBL top hitse value%identityAlignment
A0A0A0L054 Microtubule associated protein (Ase1)5.8e-7288.16Show/hide
Query:  MCHSKSTPFPGTRRILGSLGLCIVAFAFFSASSKAQMAVPSTGQLCISDCSTCPVVCTAPPPPPRSFIPAPPNFYGGYNMAPPATPSYYLWGPPPPVTNY
        MCHSK+ PFPGTRRILGS GL IVAF  FSASSKAQMAVPSTGQLCISDCSTCPV+CTAPPPP     P PPNFYGG+NMAPPATPSYYLWGPPPPV NY
Subjt:  MCHSKSTPFPGTRRILGSLGLCIVAFAFFSASSKAQMAVPSTGQLCISDCSTCPVVCTAPPPPPRSFIPAPPNFYGGYNMAPPATPSYYLWGPPPPVTNY

Query:  FMGARPSGEMPQTVGPRDYSYPYYYFYSSNSGSFSCISKFIVLFVCLLHFVL
        F+GARPSGEMPQTVGPRDYSYPYYYFYSSNSGSF+ ISKFIVLFVCLLHFVL
Subjt:  FMGARPSGEMPQTVGPRDYSYPYYYFYSSNSGSFSCISKFIVLFVCLLHFVL

A0A2N9HA71 Uncharacterized protein2.4e-1740Show/hide
Query:  SASSKAQMAVPSTGQLCISDCSTCPVVCTAPPP----------------PPRSFI------PAPPNFYGGYNMAPPATPSYYLWGPPPPVTNYFMGARPS
        + +S+ Q+  PS+G LCISDC+TCPV+C+ PPP                PP+S+       P+PP+       +PP   SY  WG PPP   YF    PS
Subjt:  SASSKAQMAVPSTGQLCISDCSTCPVVCTAPPP----------------PPRSFI------PAPPNFYGGYNMAPPATPSYYLWGPPPPVTNYFMGARPS

Query:  G----EMPQTVGPRDYSYPYYYFYSSNSGSFSCI--SKFIVLFVCLLHFV
        G     MP   GP DY YPYYYFYSS + S   +  S +  + + L HFV
Subjt:  G----EMPQTVGPRDYSYPYYYFYSSNSGSFSCI--SKFIVLFVCLLHFV

A0A5N6RNK5 Uncharacterized protein6.3e-1842.68Show/hide
Query:  FPGTRRILGSLGLCIVAFAFFSASSKAQMAVPSTGQLCISDCSTCPVVCTAPPPP-PRSFIPAPPNFYGGYNMAPP-----------ATP----SYYLWG
        FP   RI G +GL +    F   +S  Q+  PST +LCISDC+TCPV+C+ PPPP  +SF P  P+ +      PP           ATP     Y  WG
Subjt:  FPGTRRILGSLGLCIVAFAFFSASSKAQMAVPSTGQLCISDCSTCPVVCTAPPPP-PRSFIPAPPNFYGGYNMAPP-----------ATP----SYYLWG

Query:  -PPPPVTNYFMGARPSG---EMPQTVG-PRDYSYPYYYFYSSNSGSFSCISKFIVLFVCLLHFV
         PPPP   Y+    PSG    +P T G PRDY YPYYYFY+S++ S S  + F+ + + L HFV
Subjt:  -PPPPVTNYFMGARPSG---EMPQTVG-PRDYSYPYYYFYSSNSGSFSCISKFIVLFVCLLHFV

A0A6J1FKD3 leucine-rich repeat extensin-like protein 24.6e-3764.54Show/hide
Query:  PFPGTRRILGSLGLCIVAFAFFSASSKAQMAVPSTGQLCISDCSTCPVVCTAPPPPPRSF----IPAPPNFYGGYNMAPPA-TPSYYLWGPPPPVTNYFM
        PF G  R   SLGL ++A A F   S AQ+ VPSTGQLCIS C TCPVVCT   P PRS+     P PP FYGGY   PPA T SY+L GP PPV NY  
Subjt:  PFPGTRRILGSLGLCIVAFAFFSASSKAQMAVPSTGQLCISDCSTCPVVCTAPPPPPRSF----IPAPPNFYGGYNMAPPA-TPSYYLWGPPPPVTNYFM

Query:  GARPSGEMPQTVGPRDYSYPYYYFYSSNSGSFSCISKFIVL
        GA+PSG+MPQTVGPRDYSYPYYYFYSSN GS S    FIVL
Subjt:  GARPSGEMPQTVGPRDYSYPYYYFYSSNSGSFSCISKFIVL

A0A6J1IUS7 leucine-rich repeat extensin-like protein 11.8e-4162.34Show/hide
Query:  PFPGTRRILGSLGLCIVAFAFFSASSKAQMAVPSTGQLCISDCSTCPVVCTAPPPPP-----RSFIPA----PPNFYGGYNMAPPA-TPSYYLWGPPPPV
        PF G  R   SLGLC++A A F   S AQ+ VPST QLCIS C TCPVVCT P P P      S+IP+    PP FYGGY   PPA T SY+  GPPPPV
Subjt:  PFPGTRRILGSLGLCIVAFAFFSASSKAQMAVPSTGQLCISDCSTCPVVCTAPPPPP-----RSFIPA----PPNFYGGYNMAPPA-TPSYYLWGPPPPV

Query:  TNYFMGARPSGEMPQTVGPRDYSYPYYYFYSSNSGSFSCISKFIVLFVCLLHFV
         NY  GA+PSG+MPQTVGPRDYSYPYYYFYSSN GSF+  S FI+LF C  H V
Subjt:  TNYFMGARPSGEMPQTVGPRDYSYPYYYFYSSNSGSFSCISKFIVLFVCLLHFV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G11990.1 proline-rich family protein3.2e-0627.27Show/hide
Query:  LGLCIVAFAFFSASSKAQMAVPSTGQLCISDCSTCPVVCTAPP--------PPPRSFIP-------------APPNFYGGYNMAP------PATPSYYLW
        + L +V     S S +  +  P    LCIS+CSTCP +C+ PP        PPP   +P             +PP      +  P      P  P +Y +
Subjt:  LGLCIVAFAFFSASSKAQMAVPSTGQLCISDCSTCPVVCTAPP--------PPPRSFIP-------------APPNFYGGYNMAP------PATPSYYLW

Query:  ---GPPPPVTNYFMGARPS------GEMPQTVGPRD--YSYPYYYFYSSNSGSFSCISKFIVLFV
            PPPP++    G+ PS          Q+ G +   Y +PY+YFY++++ +    S F++  V
Subjt:  ---GPPPPVTNYFMGARPS------GEMPQTVGPRD--YSYPYYYFYSSNSGSFSCISKFIVLFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTCATTCCAAATCGACGCCGTTTCCAGGAACAAGGCGAATTCTTGGCTCTTTGGGGCTTTGCATTGTCGCATTCGCTTTCTTTTCAGCATCATCCAAAGCCCAAAT
GGCTGTCCCCTCCACCGGACAGCTCTGCATCAGCGACTGCTCCACGTGTCCGGTGGTTTGTACGGCGCCTCCTCCTCCTCCACGCTCTTTCATTCCGGCTCCGCCCAACT
TTTACGGTGGGTACAATATGGCCCCGCCGGCTACTCCGTCGTATTATTTATGGGGTCCGCCGCCTCCGGTTACAAATTATTTTATGGGCGCACGGCCTTCCGGTGAGATG
CCTCAAACGGTGGGGCCTCGGGATTATTCTTACCCTTATTATTATTTCTATAGTTCAAATTCGGGTTCGTTCTCTTGTATTTCGAAGTTCATTGTGTTGTTTGTGTGTTT
GCTTCATTTTGTTTTGTGA
mRNA sequenceShow/hide mRNA sequence
TTTTTCCATACACTTTCTCCACCGAAAAGAATGACAGAACTTAGCACATAAAACGAACAAAAAGTCCTTTTGGCACGATCATTTCACGAGCTCCCATCATACCTCCAAAC
TAAATCCCAACCCAACAATAGTGTTCTTCCTTTAGTTCTTCGTTTAGTTCTTCCAACAAACCACTTTCTTTTCTCATCAGCAGTTCCTTCGATGTGTCATTCCAAATCGA
CGCCGTTTCCAGGAACAAGGCGAATTCTTGGCTCTTTGGGGCTTTGCATTGTCGCATTCGCTTTCTTTTCAGCATCATCCAAAGCCCAAATGGCTGTCCCCTCCACCGGA
CAGCTCTGCATCAGCGACTGCTCCACGTGTCCGGTGGTTTGTACGGCGCCTCCTCCTCCTCCACGCTCTTTCATTCCGGCTCCGCCCAACTTTTACGGTGGGTACAATAT
GGCCCCGCCGGCTACTCCGTCGTATTATTTATGGGGTCCGCCGCCTCCGGTTACAAATTATTTTATGGGCGCACGGCCTTCCGGTGAGATGCCTCAAACGGTGGGGCCTC
GGGATTATTCTTACCCTTATTATTATTTCTATAGTTCAAATTCGGGTTCGTTCTCTTGTATTTCGAAGTTCATTGTGTTGTTTGTGTGTTTGCTTCATTTTGTTTTGTGA
TGGCGTTGACAAGAACCTGACGGATTGTTGTTGTTGAATGGCTTGTGTTTTGGGGACTTGATCAATTGTTTTGTAACATTTTGATGTTTTCTTTCGGTTAGGTCTTTGCT
TTAACCGATTAAGCGGTTCCTGTAGGTAAAAGTGACGTATCGTTGTTGATCGGTTAGTTCGAATCTTCTACTAGTATTTGTAATGATAAAAAAAAAAGGAGAAACTATAG
ATTGATAGAGACTGCATGAGAGTAAGTTAATTGTATAAATATTTCAAAATTTGTAT
Protein sequenceShow/hide protein sequence
MCHSKSTPFPGTRRILGSLGLCIVAFAFFSASSKAQMAVPSTGQLCISDCSTCPVVCTAPPPPPRSFIPAPPNFYGGYNMAPPATPSYYLWGPPPPVTNYFMGARPSGEM
PQTVGPRDYSYPYYYFYSSNSGSFSCISKFIVLFVCLLHFVL