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Cmc07g0183181 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc07g0183181
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrotransposon protein
Genome locationCMiso1.1chr07:1794780..1796049
RNA-Seq ExpressionCmc07g0183181
SyntenyCmc07g0183181
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025457.1 hypothetical protein E6C27_scaffold417G00550 [Cucumis melo var. makuwa]3.8e-1081.4Show/hide
Query:  STFVWLKSSGEGKGRGKLVSDREGSVTCHMGTQFCFRVYVSVF
        S  V +  SGEGK RGKL SDREGSVTCHMGTQFCFRVYVSVF
Subjt:  STFVWLKSSGEGKGRGKLVSDREGSVTCHMGTQFCFRVYVSVF
KAA0038098.1 uncharacterized protein E6C27_scaffold36G003180 [Cucumis melo var. makuwa]3.8e-1078.26Show/hide
Query:  QLGSTFVWLKSSGEGKGRGKLVSDREGSVTCHMGTQFCFRVYVSVF
        +LG+ +  L  S EGKGRGKL SDREGSVTCHMGTQFCFRVYVSVF
Subjt:  QLGSTFVWLKSSGEGKGRGKLVSDREGSVTCHMGTQFCFRVYVSVF
KAA0063966.1 hypothetical protein E6C27_scaffold616G001210 [Cucumis melo var. makuwa]5.0e-1097.06Show/hide
Query:  GEGKGRGKLVSDREGSVTCHMGTQFCFRVYVSVF
        GEGKGRGKL SDREGSVTCHMGTQFCFRVYVSVF
Subjt:  GEGKGRGKLVSDREGSVTCHMGTQFCFRVYVSVF
TYJ98810.1 hypothetical protein E5676_scaffold703G00090 [Cucumis melo var. makuwa]5.0e-1097.06Show/hide
Query:  GEGKGRGKLVSDREGSVTCHMGTQFCFRVYVSVF
        GEGKGRGKL SDREGSVTCHMGTQFCFRVYVSVF
Subjt:  GEGKGRGKLVSDREGSVTCHMGTQFCFRVYVSVF
TYK27110.1 uncharacterized protein E5676_scaffold2527G00070 [Cucumis melo var. makuwa]3.8e-1074.47Show/hide
Query:  CQLGSTFVWLKSSGEGKGRGKLVSDREGSVTCHMGTQFCFRVYVSVF
        CQ   T        EGKGRGKL SDREGSVTCHMGTQFCFRVYVSVF
Subjt:  CQLGSTFVWLKSSGEGKGRGKLVSDREGSVTCHMGTQFCFRVYVSVF
TrEMBL top hitse value%identityAlignment
A0A5A7VJ46 Uncharacterized protein2.4e-1097.06Show/hide
Query:  GEGKGRGKLVSDREGSVTCHMGTQFCFRVYVSVF
        GEGKGRGKL SDREGSVTCHMGTQFCFRVYVSVF
Subjt:  GEGKGRGKLVSDREGSVTCHMGTQFCFRVYVSVF
A0A5D3BG96 Uncharacterized protein2.4e-1097.06Show/hide
Query:  GEGKGRGKLVSDREGSVTCHMGTQFCFRVYVSVF
        GEGKGRGKL SDREGSVTCHMGTQFCFRVYVSVF
Subjt:  GEGKGRGKLVSDREGSVTCHMGTQFCFRVYVSVF
A0A5D3C0E4 Uncharacterized protein1.8e-1081.4Show/hide
Query:  STFVWLKSSGEGKGRGKLVSDREGSVTCHMGTQFCFRVYVSVF
        S  V +  SGEGK RGKL SDREGSVTCHMGTQFCFRVYVSVF
Subjt:  STFVWLKSSGEGKGRGKLVSDREGSVTCHMGTQFCFRVYVSVF
A0A5D3DAI2 Uncharacterized protein1.8e-1078.26Show/hide
Query:  QLGSTFVWLKSSGEGKGRGKLVSDREGSVTCHMGTQFCFRVYVSVF
        +LG+ +  L  S EGKGRGKL SDREGSVTCHMGTQFCFRVYVSVF
Subjt:  QLGSTFVWLKSSGEGKGRGKLVSDREGSVTCHMGTQFCFRVYVSVF
A0A5D3DUY2 Uncharacterized protein1.8e-1074.47Show/hide
Query:  CQLGSTFVWLKSSGEGKGRGKLVSDREGSVTCHMGTQFCFRVYVSVF
        CQ   T        EGKGRGKL SDREGSVTCHMGTQFCFRVYVSVF
Subjt:  CQLGSTFVWLKSSGEGKGRGKLVSDREGSVTCHMGTQFCFRVYVSVF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTAGGATCAAGTTAATTGGAGAATTTTACTGTCAACTAGGGAGTACCTTTGTTTGGCTAAAATCTTCAGGCGAAGGTAAAGGTAGAGGAAAGCTGGTGAGC
GACAGAGAAGGATCCGTGACATGCCATATGGGGACTCAATTTTGCTTCCGCGTTTATGTTTCAGTGTTTTAA
mRNA sequenceShow/hide mRNA sequence
TTAAGATACTAAGTGTTCCTTTTATGATTAGGATCAAGTTAATTGGAGAATTTTACTGTCAACTAGGGAGTACCTTTGTTTGGCTAAAATCTTCAGGCGAAGGTA
AAGGTAGAGGAAAGCTGGTGAGCGACAGAGAAGGATCCGTGACATGCCATATGGGGACTCAATTTTGCTTCCGCGTTTATGTTTCAGTGTTTTAATATTCCATTT
TTAATGAAAAATTTATTTTTCCCTCGTTTCAAAAAGTGTCTCTTGTCATTGTTTCATTTTAGTAACGACCTCAGCTTAGTATAAAGAGTTGGGTCGTTACATATA
CATTATTACGAAAACATGATTCGAGATCAAGATCATAGGAGAGGTTCTGAAAACGAAAAAGAAAGAAAGGAGTTAGAGAAGAAGAAATTTAATTACTTGACAGTC
AAGAGCATAGTGAGGTAAGGTTCTTTGAGGAAAGCTGAAGCAATTGTTGATCATCAAAGCTGTTATAGAGACGTTGAAGTCTATCCCTTGGGGCTTGGCAAAAAC
GACGCAAAATACACCAAACATTGATTCTACTCACAC
Protein sequenceShow/hide protein sequence
MIRIKLIGEFYCQLGSTFVWLKSSGEGKGRGKLVSDREGSVTCHMGTQFCFRVYVSVF