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Cmc07g0185001 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc07g0185001
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionCysteine desulfurase
Genome locationCMiso1.1chr07:2934940..2936086
RNA-Seq ExpressionCmc07g0185001
SyntenyCmc07g0185001
Gene Ontology termsGO:0000122 - negative regulation of transcription by RNA polymerase II (biological process)
GO:0016575 - histone deacetylation (biological process)
GO:0000118 - histone deacetylase complex (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0004407 - histone deacetylase activity (molecular function)
InterPro domainsIPR000192 - Aminotransferase class V domain
IPR015421 - Pyridoxal phosphate-dependent transferase, major domain
IPR015422 - Pyridoxal phosphate-dependent transferase, small domain
IPR015424 - Pyridoxal phosphate-dependent transferase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570440.1 Cysteine desulfurase 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]9.5e-1558.54Show/hide
Query:  MPPFLDGGDFLTIPHL-HNLVPD----LKLGRLQLEKQLVWGAAIDYLSRIEMQKIHSYEEELANYLYENLRAVPNIRIYGP
        MPPFL GG+ ++   L H+   +     + G   + + +  GAAIDYLS I MQKIH+YEEELANYLYENLRAVPNIRIYGP
Subjt:  MPPFLDGGDFLTIPHL-HNLVPD----LKLGRLQLEKQLVWGAAIDYLSRIEMQKIHSYEEELANYLYENLRAVPNIRIYGP
KAG7010312.1 Cysteine desulfurase 1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]9.5e-1558.54Show/hide
Query:  MPPFLDGGDFLTIPHL-HNLVPD----LKLGRLQLEKQLVWGAAIDYLSRIEMQKIHSYEEELANYLYENLRAVPNIRIYGP
        MPPFL GG+ ++   L H+   +     + G   + + +  GAAIDYLS I MQKIH+YEEELANYLYENLRAVPNIRIYGP
Subjt:  MPPFLDGGDFLTIPHL-HNLVPD----LKLGRLQLEKQLVWGAAIDYLSRIEMQKIHSYEEELANYLYENLRAVPNIRIYGP
KGN48344.2 hypothetical protein Csa_002961 [Cucumis sativus]3.3e-1560.24Show/hide
Query:  MPPFLDGGDFLT---IPHLHNLVPD--LKLGRLQLEKQLVWGAAIDYLSRIEMQKIHSYEEELANYLYENLRAVPNIRIYGPA
        MPPFL GG+ ++   + H     P    + G   + + +  GAAIDYLS I MQKIHSYEEELANYLYENLRAVPNIRIYGPA
Subjt:  MPPFLDGGDFLT---IPHLHNLVPD--LKLGRLQLEKQLVWGAAIDYLSRIEMQKIHSYEEELANYLYENLRAVPNIRIYGPA
XP_004140178.2 cysteine desulfurase 1, chloroplastic [Cucumis sativus]3.3e-1560.24Show/hide
Query:  MPPFLDGGDFLT---IPHLHNLVPD--LKLGRLQLEKQLVWGAAIDYLSRIEMQKIHSYEEELANYLYENLRAVPNIRIYGPA
        MPPFL GG+ ++   + H     P    + G   + + +  GAAIDYLS I MQKIHSYEEELANYLYENLRAVPNIRIYGPA
Subjt:  MPPFLDGGDFLT---IPHLHNLVPD--LKLGRLQLEKQLVWGAAIDYLSRIEMQKIHSYEEELANYLYENLRAVPNIRIYGPA
XP_038902898.1 cysteine desulfurase 1, chloroplastic [Benincasa hispida]9.5e-1559.04Show/hide
Query:  MPPFLDGGDFLT---IPHLHNLVPD--LKLGRLQLEKQLVWGAAIDYLSRIEMQKIHSYEEELANYLYENLRAVPNIRIYGPA
        MPPFL GG+ ++   + H     P    + G   + + +  GAAIDYLS I MQKIHSYEEELANYLYENLR VPNIRIYGPA
Subjt:  MPPFLDGGDFLT---IPHLHNLVPD--LKLGRLQLEKQLVWGAAIDYLSRIEMQKIHSYEEELANYLYENLRAVPNIRIYGPA
TrEMBL top hitse value%identityAlignment
A0A0A0KEG9 Cysteine desulfurase1.6e-1560.24Show/hide
Query:  MPPFLDGGDFLT---IPHLHNLVPD--LKLGRLQLEKQLVWGAAIDYLSRIEMQKIHSYEEELANYLYENLRAVPNIRIYGPA
        MPPFL GG+ ++   + H     P    + G   + + +  GAAIDYLS I MQKIHSYEEELANYLYENLRAVPNIRIYGPA
Subjt:  MPPFLDGGDFLT---IPHLHNLVPD--LKLGRLQLEKQLVWGAAIDYLSRIEMQKIHSYEEELANYLYENLRAVPNIRIYGPA
A0A5A7V4C2 B-like cyclin7.8e-1559.04Show/hide
Query:  MPPFLDGGDFLT---IPHLHNLVPD--LKLGRLQLEKQLVWGAAIDYLSRIEMQKIHSYEEELANYLYENLRAVPNIRIYGPA
        MPPFL GG+ ++   + H     P    + G   + + +  GAAIDYLS I M KIHSYEEELANYLYENLRAVPNIRIYGPA
Subjt:  MPPFLDGGDFLT---IPHLHNLVPD--LKLGRLQLEKQLVWGAAIDYLSRIEMQKIHSYEEELANYLYENLRAVPNIRIYGPA
A0A6J1FVQ2 Cysteine desulfurase4.6e-1558.54Show/hide
Query:  MPPFLDGGDFLTIPHL-HNLVPD----LKLGRLQLEKQLVWGAAIDYLSRIEMQKIHSYEEELANYLYENLRAVPNIRIYGP
        MPPFL GG+ ++   L H+   +     + G   + + +  GAAIDYLS I MQKIH+YEEELANYLYENLRAVPNIRIYGP
Subjt:  MPPFLDGGDFLTIPHL-HNLVPD----LKLGRLQLEKQLVWGAAIDYLSRIEMQKIHSYEEELANYLYENLRAVPNIRIYGP
A0A6J1JDG9 cysteine desulfurase 1, chloroplastic-like7.8e-1558.54Show/hide
Query:  MPPFLDGGDFLTIPHL-HNLVPD----LKLGRLQLEKQLVWGAAIDYLSRIEMQKIHSYEEELANYLYENLRAVPNIRIYGP
        MPPFL GG+ ++   L H+   +     + G   + + +  GAAIDYLS I MQKIH+YEEELANYLYENLRAVPNIRIYGP
Subjt:  MPPFLDGGDFLTIPHL-HNLVPD----LKLGRLQLEKQLVWGAAIDYLSRIEMQKIHSYEEELANYLYENLRAVPNIRIYGP
A0A6J1JFG5 Cysteine desulfurase7.8e-1558.54Show/hide
Query:  MPPFLDGGDFLTIPHL-HNLVPD----LKLGRLQLEKQLVWGAAIDYLSRIEMQKIHSYEEELANYLYENLRAVPNIRIYGP
        MPPFL GG+ ++   L H+   +     + G   + + +  GAAIDYLS I MQKIH+YEEELANYLYENLRAVPNIRIYGP
Subjt:  MPPFLDGGDFLTIPHL-HNLVPD----LKLGRLQLEKQLVWGAAIDYLSRIEMQKIHSYEEELANYLYENLRAVPNIRIYGP
SwissProt top hitse value%identityAlignment
A9MEP3 Cysteine desulfurase3.7e-0653.49Show/hide
Query:  GAAIDYLSRIEMQKIHSYEEELANYLYENLRAVPNIRIYGPAQ
        GAAIDY++ + + KI  YE+ L +Y  E L  VP+IR+YGPAQ
Subjt:  GAAIDYLSRIEMQKIHSYEEELANYLYENLRAVPNIRIYGPAQ
Q55793 Probable cysteine desulfurase2.8e-0936.59Show/hide
Query:  MPPFLDGGDFLT---IPHL--HNLVPDLKLGRLQLEKQLVWGAAIDYLSRIEMQKIHSYEEELANYLYENLRAVPNIRIYGP
        MPPF  GG+ +      H     L    + G   + + +  GAA+DYL+ + M+ IH+YE EL +YL++ L  +P +R+YGP
Subjt:  MPPFLDGGDFLT---IPHL--HNLVPDLKLGRLQLEKQLVWGAAIDYLSRIEMQKIHSYEEELANYLYENLRAVPNIRIYGP
Q5HHH0 Probable cysteine desulfurase2.4e-0533.72Show/hide
Query:  MPPFLDGGDFLTIPHLH-----NLVPDLKLGRLQLEKQLVWGAAIDYLSRIEMQKIHSYEEELANYLYENLRAVPNIRIYGPAQFR
        M P   GGD +     +     +L    + G   + + +    AI YL RI    IH YE+EL  Y YE + A+  I IYGP + R
Subjt:  MPPFLDGGDFLTIPHLH-----NLVPDLKLGRLQLEKQLVWGAAIDYLSRIEMQKIHSYEEELANYLYENLRAVPNIRIYGPAQFR
Q93WX6 Cysteine desulfurase 1, chloroplastic7.8e-1243.9Show/hide
Query:  MPPFLDGGDFLT---IPHLHNLVPD--LKLGRLQLEKQLVWGAAIDYLSRIEMQKIHSYEEELANYLYENLRAVPNIRIYGP
        MPPFL GG+ ++   + H     P    + G   + + +  GAA+DYLS I M KIH YE E+  YLYE L ++P++RIYGP
Subjt:  MPPFLDGGDFLT---IPHLHNLVPD--LKLGRLQLEKQLVWGAAIDYLSRIEMQKIHSYEEELANYLYENLRAVPNIRIYGP
Q9XAD5 Probable cysteine desulfurase1.3e-0635.37Show/hide
Query:  MPPFLDGGDFLTIPHLHNLV-----PDLKLGRLQLEKQLVWGAAIDYLSRIEMQKIHSYEEELANYLYENLRAVPNIRIYGP
        +PPFL GG+ +    +H+          + G   + + +  GAAIDYL+ I M KI ++E  L  Y  + L  VP++RI GP
Subjt:  MPPFLDGGDFLTIPHLHNLV-----PDLKLGRLQLEKQLVWGAAIDYLSRIEMQKIHSYEEELANYLYENLRAVPNIRIYGP
Arabidopsis top hitse value%identityAlignment
AT1G08490.1 chloroplastic NIFS-like cysteine desulfurase5.5e-1343.9Show/hide
Query:  MPPFLDGGDFLT---IPHLHNLVPD--LKLGRLQLEKQLVWGAAIDYLSRIEMQKIHSYEEELANYLYENLRAVPNIRIYGP
        MPPFL GG+ ++   + H     P    + G   + + +  GAA+DYLS I M KIH YE E+  YLYE L ++P++RIYGP
Subjt:  MPPFLDGGDFLT---IPHLHNLVPD--LKLGRLQLEKQLVWGAAIDYLSRIEMQKIHSYEEELANYLYENLRAVPNIRIYGP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCCATTCTTAGATGGTGGAGATTTCTTGACCATTCCACATTTGCACAACCTCGTTCCAGATTTGAAGCTGGGACGCCTACAATTGGAGAAGCAATTGGTT
TGGGGAGCTGCTATTGATTATTTATCTAGGATCGAAATGCAAAAAATTCATAGTTACGAAGAAGAATTGGCGAATTATCTATATGAAAACCTTCGTGCAGTCCCT
AACATTCGAATATATGGCCCAGCTCAATTTAGACTTTAG
mRNA sequenceShow/hide mRNA sequence
GCCTTACATTTGGGCATATGAAGATAAGGAATAAACATGCTTAAGATGTGTGGGCCTACAGGCATTGGATTCTTGTAGATTGATCTATTGTTTGCAATGCCTCCA
TTCTTAGATGGTGGAGATTTCTTGACCATTCCACATTTGCACAACCTCGTTCCAGATTTGAAGCTGGGACGCCTACAATTGGAGAAGCAATTGGTTTGGGGAGCT
GCTATTGATTATTTATCTAGGATCGAAATGCAAAAAATTCATAGTTACGAAGAAGAATTGGCGAATTATCTATATGAAAACCTTCGTGCAGTCCCTAACATTCGA
ATATATGGCCCAGCTCAATTTAGACTTTAG
Protein sequenceShow/hide protein sequence
MPPFLDGGDFLTIPHLHNLVPDLKLGRLQLEKQLVWGAAIDYLSRIEMQKIHSYEEELANYLYENLRAVPNIRIYGPAQFRL