; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc07g0185061 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc07g0185061
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr07:2962857..2964389
RNA-Seq ExpressionCmc07g0185061
SyntenyCmc07g0185061
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR021109 - Aspartic peptidase domain superfamily
IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032849.1 reverse transcriptase [Cucumis melo var. makuwa]2.7e-28598.99Show/hide
Query:  MVDSGATYNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
        MVDSGAT+NFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
Subjt:  MVDSGATYNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPG KPPAKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFLVMPFGLTNAPATLCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGK
        GAFEFLVMPFGLTNAPAT CTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGK
Subjt:  GAFEFLVMPFGLTNAPATLCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGK

Query:  IAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQAAFDGLKQALMEGPLLGIADVTKPFEVEIDASDYALG
        IAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQ AFDGLKQALMEGPLLGIADVTKPFEVE DASDYALG
Subjt:  IAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQAAFDGLKQALMEGPLLGIADVTKPFEVEIDASDYALG

KAA0037220.1 reverse transcriptase [Cucumis melo var. makuwa]2.7e-28598.99Show/hide
Query:  MVDSGATYNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
        MVDSGAT+NFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
Subjt:  MVDSGATYNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPG KPPAKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFLVMPFGLTNAPATLCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGK
        GAFEFLVMPFGLTNAPAT CTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGK
Subjt:  GAFEFLVMPFGLTNAPATLCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGK

Query:  IAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQAAFDGLKQALMEGPLLGIADVTKPFEVEIDASDYALG
        IAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQ AFDGLKQALMEGPLLGIADVTKPFEVE DASDYALG
Subjt:  IAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQAAFDGLKQALMEGPLLGIADVTKPFEVEIDASDYALG

KAA0052270.1 uncharacterized protein E6C27_scaffold207G00960 [Cucumis melo var. makuwa]2.1e-28595.69Show/hide
Query:  MVDSGATYNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
        MVDSGAT+NFITE EAKRLNLRWEKDAGRMK VNSAALPIIGLVKRTMIRLG WSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
Subjt:  MVDSGATYNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPL SSENS ETVPKEI+RVLEKYRDVMPDSLPKSLPP+RMIDHEIELVPG KPPAKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAPVLFQ+KKDGSLRLCI YRALNKLTVRNKYPLPIIT+LFDRLH AKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFLVMPFGLTNAPATLCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGK
        GAFEFLVMPFGLTNAPAT CTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGK
Subjt:  GAFEFLVMPFGLTNAPATLCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGK

Query:  IAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQAAFDGLKQALMEGPLLGIADVTKPFEVEIDASDYALGVCSYRM
        IAAI DWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQAAFDGLKQA++EGPLLGIADVT+PFEVE DASDYALGVCSYRM
Subjt:  IAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQAAFDGLKQALMEGPLLGIADVTKPFEVEIDASDYALGVCSYRM

Query:  GTRSHTKVEN
         TR HTKV+N
Subjt:  GTRSHTKVEN

KAA0063412.1 reverse transcriptase [Cucumis melo var. makuwa]2.7e-28598.99Show/hide
Query:  MVDSGATYNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
        MVDSGAT+NFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
Subjt:  MVDSGATYNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPG KPPAKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFLVMPFGLTNAPATLCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGK
        GAFEFLVMPFGLTNAPAT CTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGK
Subjt:  GAFEFLVMPFGLTNAPATLCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGK

Query:  IAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQAAFDGLKQALMEGPLLGIADVTKPFEVEIDASDYALG
        IAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQ AFDGLKQALMEGPLLGIADVTKPFEVE DASDYALG
Subjt:  IAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQAAFDGLKQALMEGPLLGIADVTKPFEVEIDASDYALG

KAA0067557.1 reverse transcriptase [Cucumis melo var. makuwa]2.7e-28598.99Show/hide
Query:  MVDSGATYNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
        MVDSGAT+NFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
Subjt:  MVDSGATYNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPG KPPAKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFLVMPFGLTNAPATLCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGK
        GAFEFLVMPFGLTNAPAT CTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGK
Subjt:  GAFEFLVMPFGLTNAPATLCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGK

Query:  IAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQAAFDGLKQALMEGPLLGIADVTKPFEVEIDASDYALG
        IAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQ AFDGLKQALMEGPLLGIADVTKPFEVE DASDYALG
Subjt:  IAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQAAFDGLKQALMEGPLLGIADVTKPFEVEIDASDYALG

TrEMBL top hitse value%identityAlignment
A0A5A7T0E2 Reverse transcriptase1.3e-28598.99Show/hide
Query:  MVDSGATYNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
        MVDSGAT+NFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
Subjt:  MVDSGATYNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPG KPPAKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFLVMPFGLTNAPATLCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGK
        GAFEFLVMPFGLTNAPAT CTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGK
Subjt:  GAFEFLVMPFGLTNAPATLCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGK

Query:  IAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQAAFDGLKQALMEGPLLGIADVTKPFEVEIDASDYALG
        IAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQ AFDGLKQALMEGPLLGIADVTKPFEVE DASDYALG
Subjt:  IAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQAAFDGLKQALMEGPLLGIADVTKPFEVEIDASDYALG

A0A5A7UAP7 Reverse transcriptase domain-containing protein1.0e-28595.69Show/hide
Query:  MVDSGATYNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
        MVDSGAT+NFITE EAKRLNLRWEKDAGRMK VNSAALPIIGLVKRTMIRLG WSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
Subjt:  MVDSGATYNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPL SSENS ETVPKEI+RVLEKYRDVMPDSLPKSLPP+RMIDHEIELVPG KPPAKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAPVLFQ+KKDGSLRLCI YRALNKLTVRNKYPLPIIT+LFDRLH AKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFLVMPFGLTNAPATLCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGK
        GAFEFLVMPFGLTNAPAT CTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGK
Subjt:  GAFEFLVMPFGLTNAPATLCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGK

Query:  IAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQAAFDGLKQALMEGPLLGIADVTKPFEVEIDASDYALGVCSYRM
        IAAI DWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQAAFDGLKQA++EGPLLGIADVT+PFEVE DASDYALGVCSYRM
Subjt:  IAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQAAFDGLKQALMEGPLLGIADVTKPFEVEIDASDYALGVCSYRM

Query:  GTRSHTKVEN
         TR HTKV+N
Subjt:  GTRSHTKVEN

A0A5D3B7E7 Reverse transcriptase1.3e-28598.99Show/hide
Query:  MVDSGATYNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
        MVDSGAT+NFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
Subjt:  MVDSGATYNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPG KPPAKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFLVMPFGLTNAPATLCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGK
        GAFEFLVMPFGLTNAPAT CTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGK
Subjt:  GAFEFLVMPFGLTNAPATLCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGK

Query:  IAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQAAFDGLKQALMEGPLLGIADVTKPFEVEIDASDYALG
        IAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQ AFDGLKQALMEGPLLGIADVTKPFEVE DASDYALG
Subjt:  IAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQAAFDGLKQALMEGPLLGIADVTKPFEVEIDASDYALG

A0A5D3BRZ6 Reverse transcriptase1.3e-28598.99Show/hide
Query:  MVDSGATYNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
        MVDSGAT+NFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
Subjt:  MVDSGATYNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPG KPPAKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFLVMPFGLTNAPATLCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGK
        GAFEFLVMPFGLTNAPAT CTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGK
Subjt:  GAFEFLVMPFGLTNAPATLCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGK

Query:  IAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQAAFDGLKQALMEGPLLGIADVTKPFEVEIDASDYALG
        IAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQ AFDGLKQALMEGPLLGIADVTKPFEVE DASDYALG
Subjt:  IAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQAAFDGLKQALMEGPLLGIADVTKPFEVEIDASDYALG

A0A5D3C4R1 Reverse transcriptase1.3e-28598.99Show/hide
Query:  MVDSGATYNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
        MVDSGAT+NFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
Subjt:  MVDSGATYNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPG KPPAKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFLVMPFGLTNAPATLCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGK
        GAFEFLVMPFGLTNAPAT CTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGK
Subjt:  GAFEFLVMPFGLTNAPATLCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGK

Query:  IAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQAAFDGLKQALMEGPLLGIADVTKPFEVEIDASDYALG
        IAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQ AFDGLKQALMEGPLLGIADVTKPFEVE DASDYALG
Subjt:  IAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQAAFDGLKQALMEGPLLGIADVTKPFEVEIDASDYALG

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein1.4e-6637.43Show/hide
Query:  EIMRVLEKYRDVMPDSLPKSLP-PRRMIDHEIELV-PGVKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRAL
        E+  + ++++D+  ++  + LP P + ++ E+EL     + P +N Y + P ++  +  ++++ L +G IR +KA    PV+F  KK+G+LR+ +DY+ L
Subjt:  EIMRVLEKYRDVMPDSLPKSLP-PRRMIDHEIELV-PGVKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRAL

Query:  NKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATLCTLMNQVFHEYLDKFVVVYLDDIVVY
        NK    N YPLP+I  L  ++ G+  F+KLDL+S Y+ +R+ +GDE K       G FE+LVMP+G++ APA     +N +  E  +  VV Y+DDI+++
Subjt:  NKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATLCTLMNQVFHEYLDKFVVVYLDDIVVY

Query:  STTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLG-HVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELL
        S +  EH  H++ V QKLK   L + + KC F Q ++ F+G H+ E G    +E  I  +  W  PK+  ELR FLG  NY R+F+   S+   PL  LL
Subjt:  STTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLG-HVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELL

Query:  KKDVHWNWDPECQAAFDGLKQALMEGPLLGIADVTKPFEVEIDASDYALG
        KKDV W W P    A + +KQ L+  P+L   D +K   +E DASD A+G
Subjt:  KKDVHWNWDPECQAAFDGLKQALMEGPLLGIADVTKPFEVEIDASDYALG

P0CT35 Transposon Tf2-2 polyprotein1.4e-6637.43Show/hide
Query:  EIMRVLEKYRDVMPDSLPKSLP-PRRMIDHEIELV-PGVKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRAL
        E+  + ++++D+  ++  + LP P + ++ E+EL     + P +N Y + P ++  +  ++++ L +G IR +KA    PV+F  KK+G+LR+ +DY+ L
Subjt:  EIMRVLEKYRDVMPDSLPKSLP-PRRMIDHEIELV-PGVKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRAL

Query:  NKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATLCTLMNQVFHEYLDKFVVVYLDDIVVY
        NK    N YPLP+I  L  ++ G+  F+KLDL+S Y+ +R+ +GDE K       G FE+LVMP+G++ APA     +N +  E  +  VV Y+DDI+++
Subjt:  NKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATLCTLMNQVFHEYLDKFVVVYLDDIVVY

Query:  STTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLG-HVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELL
        S +  EH  H++ V QKLK   L + + KC F Q ++ F+G H+ E G    +E  I  +  W  PK+  ELR FLG  NY R+F+   S+   PL  LL
Subjt:  STTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLG-HVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELL

Query:  KKDVHWNWDPECQAAFDGLKQALMEGPLLGIADVTKPFEVEIDASDYALG
        KKDV W W P    A + +KQ L+  P+L   D +K   +E DASD A+G
Subjt:  KKDVHWNWDPECQAAFDGLKQALMEGPLLGIADVTKPFEVEIDASDYALG

P0CT36 Transposon Tf2-3 polyprotein1.4e-6637.43Show/hide
Query:  EIMRVLEKYRDVMPDSLPKSLP-PRRMIDHEIELV-PGVKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRAL
        E+  + ++++D+  ++  + LP P + ++ E+EL     + P +N Y + P ++  +  ++++ L +G IR +KA    PV+F  KK+G+LR+ +DY+ L
Subjt:  EIMRVLEKYRDVMPDSLPKSLP-PRRMIDHEIELV-PGVKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRAL

Query:  NKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATLCTLMNQVFHEYLDKFVVVYLDDIVVY
        NK    N YPLP+I  L  ++ G+  F+KLDL+S Y+ +R+ +GDE K       G FE+LVMP+G++ APA     +N +  E  +  VV Y+DDI+++
Subjt:  NKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATLCTLMNQVFHEYLDKFVVVYLDDIVVY

Query:  STTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLG-HVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELL
        S +  EH  H++ V QKLK   L + + KC F Q ++ F+G H+ E G    +E  I  +  W  PK+  ELR FLG  NY R+F+   S+   PL  LL
Subjt:  STTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLG-HVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELL

Query:  KKDVHWNWDPECQAAFDGLKQALMEGPLLGIADVTKPFEVEIDASDYALG
        KKDV W W P    A + +KQ L+  P+L   D +K   +E DASD A+G
Subjt:  KKDVHWNWDPECQAAFDGLKQALMEGPLLGIADVTKPFEVEIDASDYALG

P0CT41 Transposon Tf2-12 polyprotein1.4e-6637.43Show/hide
Query:  EIMRVLEKYRDVMPDSLPKSLP-PRRMIDHEIELV-PGVKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRAL
        E+  + ++++D+  ++  + LP P + ++ E+EL     + P +N Y + P ++  +  ++++ L +G IR +KA    PV+F  KK+G+LR+ +DY+ L
Subjt:  EIMRVLEKYRDVMPDSLPKSLP-PRRMIDHEIELV-PGVKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRAL

Query:  NKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATLCTLMNQVFHEYLDKFVVVYLDDIVVY
        NK    N YPLP+I  L  ++ G+  F+KLDL+S Y+ +R+ +GDE K       G FE+LVMP+G++ APA     +N +  E  +  VV Y+DDI+++
Subjt:  NKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATLCTLMNQVFHEYLDKFVVVYLDDIVVY

Query:  STTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLG-HVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELL
        S +  EH  H++ V QKLK   L + + KC F Q ++ F+G H+ E G    +E  I  +  W  PK+  ELR FLG  NY R+F+   S+   PL  LL
Subjt:  STTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLG-HVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELL

Query:  KKDVHWNWDPECQAAFDGLKQALMEGPLLGIADVTKPFEVEIDASDYALG
        KKDV W W P    A + +KQ L+  P+L   D +K   +E DASD A+G
Subjt:  KKDVHWNWDPECQAAFDGLKQALMEGPLLGIADVTKPFEVEIDASDYALG

Q99315 Transposon Ty3-G Gag-Pol polyprotein6.2e-6740.06Show/hide
Query:  EKYRDVMPDSLP------KSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNK
        +KYR+++ + LP       ++P    + H+IE+ PG + P    Y +      E+ K + +LL+  FI P+K+P  +PV+   KKDG+ RLC+DYR LNK
Subjt:  EKYRDVMPDSLP------KSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNK

Query:  LTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATLCTLMNQVFHEYLDKFVVVYLDDIVVYST
         T+ + +PLP I +L  R+  A+ F+ LDL SGY+Q+ +   D  KT  VT  G +E+ VMPFGL NAP+T    M   F +   +FV VYLDDI+++S 
Subjt:  LTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATLCTLMNQVFHEYLDKFVVVYLDDIVVYST

Query:  TMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKD
        + EEH  HL  V ++LK   L VK++KC FA E   FLG+ I   +I   + K AAIRD+  PK+V + + FLG+ NYYRRF+   SK A P+ +L   D
Subjt:  TMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKD

Query:  VHWNWDPECQAAFDGLKQALMEGPLLGIADVTKPFEVEIDASDYALG
            W  +   A D LK AL   P+L   +    + +  DAS   +G
Subjt:  VHWNWDPECQAAFDGLKQALMEGPLLGIADVTKPFEVEIDASDYALG

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein1.6e-2240Show/hide
Query:  DHLQKVFQKLKENQLYVKREKCSFAQERINFLG--HVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWN
        +HL  V Q  +++Q Y  R+KC+F Q +I +LG  H+I    +  +  K+ A+  W  PK+ +ELR FLGL  YYRRFV+ + K   PLTELLKK+    
Subjt:  DHLQKVFQKLKENQLYVKREKCSFAQERINFLG--HVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWN

Query:  WDPECQAAFDGLKQALMEGPLLGIADVTKPFEVEI
        W      AF  LK A+   P+L + D+  PF   +
Subjt:  WDPECQAAFDGLKQALMEGPLLGIADVTKPFEVEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGACTCCGGTGCCACCTACAATTTCATAACAGAAGTAGAAGCTAAACGTTTGAATCTCCGCTGGGAGAAGGATGCTGGAAGAATGAAAGCCGTGAATTCT
GCTGCCCTACCTATCATCGGACTAGTGAAACGAACGATGATAAGATTGGGAGGATGGAGTGGCCTCGTAGACTTTGTAGTAGTAAAAATGGACGACTTTGATGTG
GTACTGGGAATGGAGTTCCTACTTGAACATCAGGTAATCCCAATGCCTTTGGCCAAATGCTTGGTGATCACTGGACCTACACCCTCGGTTGTACAGACTGACCTA
CGTCAACCAGATGGATTGAAAATGATCTCGGCCATGCAATTAAAGAAGGGTCTCTCTCGAGACGAACCAACATTTATGGCCATCCCACTCAAATCGTCAGAGAAC
TCAGGGGAGACAGTCCCTAAGGAGATCATGCGCGTGCTAGAGAAATACCGTGATGTGATGCCCGATAGTTTGCCCAAGTCTTTGCCACCTCGGAGAATGATTGAT
CATGAGATCGAGTTAGTGCCAGGGGTAAAACCGCCTGCGAAGAATGCTTATCGTATGGCGCCTCCGGAGTTAGCTGAACTTCGGAAACAGCTAGATGAACTACTG
AATGCAGGGTTTATCCGGCCTGCAAAAGCTCCGTATGGGGCCCCAGTTCTTTTCCAAAGGAAGAAAGATGGGAGTTTACGACTGTGCATTGATTATCGCGCCCTA
AATAAGCTCACAGTCCGTAACAAGTATCCACTTCCCATAATTACTGACTTGTTCGACCGCTTACATGGGGCAAAGTATTTTTCAAAGTTAGACTTGCGGTCGGGA
TACTACCAAGTGAGAATTGCAGAGGGAGATGAACCGAAGACAACCTGTGTCACCCGATATGGTGCGTTCGAATTCCTCGTAATGCCATTTGGTCTCACCAATGCC
CCTGCCACCTTATGCACGTTGATGAACCAGGTCTTCCACGAATATCTCGATAAATTCGTAGTAGTCTACCTGGATGATATAGTGGTCTATAGTACGACCATGGAG
GAACATAGGGACCACCTACAAAAGGTTTTTCAGAAGTTGAAGGAGAATCAACTGTACGTCAAAAGAGAAAAATGCTCTTTTGCACAAGAGCGGATAAACTTCTTG
GGCCATGTGATAGAGTGTGGCCGAATTGGAATGGAAGAAGGGAAGATTGCTGCGATACGCGACTGGGCAATGCCGAAATCAGTCTCAGAGTTACGCTCCTTCCTC
GGGTTGGCAAATTACTATCGTCGATTTGTCGAGGGATTCTCGAAACGAGCAAGCCCGCTGACTGAGCTACTGAAAAAAGACGTTCACTGGAATTGGGACCCCGAG
TGCCAAGCCGCCTTCGACGGCCTAAAGCAAGCCTTGATGGAGGGGCCACTTCTAGGGATTGCGGATGTGACCAAACCTTTCGAAGTCGAGATAGATGCGTCTGAT
TATGCGTTGGGGGTGTGCTCCTACAGAATGGGCACCCGATCGCATACGAAAGTCGAAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGACTCCGGTGCCACCTACAATTTCATAACAGAAGTAGAAGCTAAACGTTTGAATCTCCGCTGGGAGAAGGATGCTGGAAGAATGAAAGCCGTGAATTCT
GCTGCCCTACCTATCATCGGACTAGTGAAACGAACGATGATAAGATTGGGAGGATGGAGTGGCCTCGTAGACTTTGTAGTAGTAAAAATGGACGACTTTGATGTG
GTACTGGGAATGGAGTTCCTACTTGAACATCAGGTAATCCCAATGCCTTTGGCCAAATGCTTGGTGATCACTGGACCTACACCCTCGGTTGTACAGACTGACCTA
CGTCAACCAGATGGATTGAAAATGATCTCGGCCATGCAATTAAAGAAGGGTCTCTCTCGAGACGAACCAACATTTATGGCCATCCCACTCAAATCGTCAGAGAAC
TCAGGGGAGACAGTCCCTAAGGAGATCATGCGCGTGCTAGAGAAATACCGTGATGTGATGCCCGATAGTTTGCCCAAGTCTTTGCCACCTCGGAGAATGATTGAT
CATGAGATCGAGTTAGTGCCAGGGGTAAAACCGCCTGCGAAGAATGCTTATCGTATGGCGCCTCCGGAGTTAGCTGAACTTCGGAAACAGCTAGATGAACTACTG
AATGCAGGGTTTATCCGGCCTGCAAAAGCTCCGTATGGGGCCCCAGTTCTTTTCCAAAGGAAGAAAGATGGGAGTTTACGACTGTGCATTGATTATCGCGCCCTA
AATAAGCTCACAGTCCGTAACAAGTATCCACTTCCCATAATTACTGACTTGTTCGACCGCTTACATGGGGCAAAGTATTTTTCAAAGTTAGACTTGCGGTCGGGA
TACTACCAAGTGAGAATTGCAGAGGGAGATGAACCGAAGACAACCTGTGTCACCCGATATGGTGCGTTCGAATTCCTCGTAATGCCATTTGGTCTCACCAATGCC
CCTGCCACCTTATGCACGTTGATGAACCAGGTCTTCCACGAATATCTCGATAAATTCGTAGTAGTCTACCTGGATGATATAGTGGTCTATAGTACGACCATGGAG
GAACATAGGGACCACCTACAAAAGGTTTTTCAGAAGTTGAAGGAGAATCAACTGTACGTCAAAAGAGAAAAATGCTCTTTTGCACAAGAGCGGATAAACTTCTTG
GGCCATGTGATAGAGTGTGGCCGAATTGGAATGGAAGAAGGGAAGATTGCTGCGATACGCGACTGGGCAATGCCGAAATCAGTCTCAGAGTTACGCTCCTTCCTC
GGGTTGGCAAATTACTATCGTCGATTTGTCGAGGGATTCTCGAAACGAGCAAGCCCGCTGACTGAGCTACTGAAAAAAGACGTTCACTGGAATTGGGACCCCGAG
TGCCAAGCCGCCTTCGACGGCCTAAAGCAAGCCTTGATGGAGGGGCCACTTCTAGGGATTGCGGATGTGACCAAACCTTTCGAAGTCGAGATAGATGCGTCTGAT
TATGCGTTGGGGGTGTGCTCCTACAGAATGGGCACCCGATCGCATACGAAAGTCGAAAATTGA
Protein sequenceShow/hide protein sequence
MVDSGATYNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSVVQTDL
RQPDGLKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELAELRKQLDELL
NAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNA
PATLCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFL
GLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQAAFDGLKQALMEGPLLGIADVTKPFEVEIDASDYALGVCSYRMGTRSHTKVEN