; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc07g0185101 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc07g0185101
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr07:3138151..3138903
RNA-Seq ExpressionCmc07g0185101
SyntenyCmc07g0185101
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066677.1 uncharacterized protein E6C27_scaffold271G00020 [Cucumis melo var. makuwa]1.7e-13695.6Show/hide
Query:  MIDHEIELVPEAKSPAKNAYRMAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYF
        MIDHEIELVP AK PAKNAYRMAPPELAELRKQLDELLN GFIRP KAPYGAPVLFQKKKDGSLRLCIDY ALNKLTVRNKYPLPIITDLFDRLHGAKYF
Subjt:  MIDHEIELVPEAKSPAKNAYRMAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYF

Query:  SKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKR
        SKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFL+MPFGLTNAP+T CTLMNQVF+EYLDKFVVVYLDDIVVYSTTMEEHRDH QKVFQKLKENQLYVKR
Subjt:  SKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKR

Query:  EKCSFAQERINFLGHVIEYSRIGMEEGKIATIRDWQCRNQSQSYAPFSDW
        EKCSFAQERINFLGHVIEYSRIGMEEGKIATIRDWQCRNQS+SYAPFSDW
Subjt:  EKCSFAQERINFLGHVIEYSRIGMEEGKIATIRDWQCRNQSQSYAPFSDW

KAA0066680.1 RNA-directed DNA polymerase-like protein [Cucumis melo var. makuwa]5.4e-13099.56Show/hide
Query:  MAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPK
        MAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPK
Subjt:  MAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPK

Query:  TTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIEYSR
        TTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIEYSR
Subjt:  TTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIEYSR

Query:  IGMEEGKIATIRDWQCRNQSQSYAPFSDW
        IGMEEGKIATIRDWQCRNQS+SYAPFSDW
Subjt:  IGMEEGKIATIRDWQCRNQSQSYAPFSDW

KAA0067557.1 reverse transcriptase [Cucumis melo var. makuwa]3.6e-12695.32Show/hide
Query:  MIDHEIELVPEAKSPAKNAYRMAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYF
        MIDHEIELVP AK PAKNAYRMAPPELAELRKQLDELLNAGFIRP KAPYGAPVLFQ+KKDGSLRLCIDY ALNKLTVRNKYPLPIITDLFDRLHGAKYF
Subjt:  MIDHEIELVPEAKSPAKNAYRMAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYF

Query:  SKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKR
        SKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFL+MPFGLTNAP+TFCTLMNQVF+EYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKR
Subjt:  SKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKR

Query:  EKCSFAQERINFLGHVIEYSRIGMEEGKIATIRDW
        EKCSFAQERINFLGHVIE  RIGMEEGKIA IRDW
Subjt:  EKCSFAQERINFLGHVIEYSRIGMEEGKIATIRDW

TYK07954.1 reverse transcriptase [Cucumis melo var. makuwa]1.6e-12695.74Show/hide
Query:  MIDHEIELVPEAKSPAKNAYRMAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYF
        MIDHEIELVP AK PAKNAYRMAPPELAELRKQLDELLNAGFIRP KAPYGAPVLFQKKKDGSLRLCIDY ALNKLTVRNKYPLPIITDLFDRLHGAKYF
Subjt:  MIDHEIELVPEAKSPAKNAYRMAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYF

Query:  SKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKR
        SKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFL+MPFGLTNAP+TFCTLMNQVF+EYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKR
Subjt:  SKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKR

Query:  EKCSFAQERINFLGHVIEYSRIGMEEGKIATIRDW
        EKCSFAQERINFLGHVIE  RIGMEEGKIA IRDW
Subjt:  EKCSFAQERINFLGHVIEYSRIGMEEGKIATIRDW

TYK27830.1 RNA-directed DNA polymerase-like protein [Cucumis melo var. makuwa]1.3e-12898.69Show/hide
Query:  MAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPK
        MAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPK
Subjt:  MAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPK

Query:  TTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIEYSR
        TTCVTRYGAFEFLIM FGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIEYS+
Subjt:  TTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIEYSR

Query:  IGMEEGKIATIRDWQCRNQSQSYAPFSDW
        IGMEEGKIATIRDWQCRNQS+SYAPFSDW
Subjt:  IGMEEGKIATIRDWQCRNQSQSYAPFSDW

TrEMBL top hitse value%identityAlignment
A0A5A7VHL6 RNA-directed DNA polymerase-like protein2.6e-13099.56Show/hide
Query:  MAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPK
        MAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPK
Subjt:  MAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPK

Query:  TTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIEYSR
        TTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIEYSR
Subjt:  TTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIEYSR

Query:  IGMEEGKIATIRDWQCRNQSQSYAPFSDW
        IGMEEGKIATIRDWQCRNQS+SYAPFSDW
Subjt:  IGMEEGKIATIRDWQCRNQSQSYAPFSDW

A0A5A7VHT2 Reverse transcriptase domain-containing protein8.4e-13795.6Show/hide
Query:  MIDHEIELVPEAKSPAKNAYRMAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYF
        MIDHEIELVP AK PAKNAYRMAPPELAELRKQLDELLN GFIRP KAPYGAPVLFQKKKDGSLRLCIDY ALNKLTVRNKYPLPIITDLFDRLHGAKYF
Subjt:  MIDHEIELVPEAKSPAKNAYRMAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYF

Query:  SKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKR
        SKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFL+MPFGLTNAP+T CTLMNQVF+EYLDKFVVVYLDDIVVYSTTMEEHRDH QKVFQKLKENQLYVKR
Subjt:  SKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKR

Query:  EKCSFAQERINFLGHVIEYSRIGMEEGKIATIRDWQCRNQSQSYAPFSDW
        EKCSFAQERINFLGHVIEYSRIGMEEGKIATIRDWQCRNQS+SYAPFSDW
Subjt:  EKCSFAQERINFLGHVIEYSRIGMEEGKIATIRDWQCRNQSQSYAPFSDW

A0A5D3C4R1 Reverse transcriptase1.8e-12695.32Show/hide
Query:  MIDHEIELVPEAKSPAKNAYRMAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYF
        MIDHEIELVP AK PAKNAYRMAPPELAELRKQLDELLNAGFIRP KAPYGAPVLFQ+KKDGSLRLCIDY ALNKLTVRNKYPLPIITDLFDRLHGAKYF
Subjt:  MIDHEIELVPEAKSPAKNAYRMAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYF

Query:  SKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKR
        SKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFL+MPFGLTNAP+TFCTLMNQVF+EYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKR
Subjt:  SKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKR

Query:  EKCSFAQERINFLGHVIEYSRIGMEEGKIATIRDW
        EKCSFAQERINFLGHVIE  RIGMEEGKIA IRDW
Subjt:  EKCSFAQERINFLGHVIEYSRIGMEEGKIATIRDW

A0A5D3C9P8 Reverse transcriptase7.9e-12795.74Show/hide
Query:  MIDHEIELVPEAKSPAKNAYRMAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYF
        MIDHEIELVP AK PAKNAYRMAPPELAELRKQLDELLNAGFIRP KAPYGAPVLFQKKKDGSLRLCIDY ALNKLTVRNKYPLPIITDLFDRLHGAKYF
Subjt:  MIDHEIELVPEAKSPAKNAYRMAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYF

Query:  SKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKR
        SKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFL+MPFGLTNAP+TFCTLMNQVF+EYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKR
Subjt:  SKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKR

Query:  EKCSFAQERINFLGHVIEYSRIGMEEGKIATIRDW
        EKCSFAQERINFLGHVIE  RIGMEEGKIA IRDW
Subjt:  EKCSFAQERINFLGHVIEYSRIGMEEGKIATIRDW

A0A5D3DX59 RNA-directed DNA polymerase-like protein6.5e-12998.69Show/hide
Query:  MAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPK
        MAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPK
Subjt:  MAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPK

Query:  TTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIEYSR
        TTCVTRYGAFEFLIM FGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIEYS+
Subjt:  TTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIEYSR

Query:  IGMEEGKIATIRDWQCRNQSQSYAPFSDW
        IGMEEGKIATIRDWQCRNQS+SYAPFSDW
Subjt:  IGMEEGKIATIRDWQCRNQSQSYAPFSDW

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein2.9e-4135.59Show/hide
Query:  IDHEIELVPE-AKSPAKNAYRMAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYF
        ++ E+EL  E  + P +N Y + P ++  +  ++++ L +G IR  KA    PV+F  KK+G+LR+ +DY  LNK    N YPLP+I  L  ++ G+  F
Subjt:  IDHEIELVPE-AKSPAKNAYRMAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYF

Query:  SKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKR
        +KLDL+S Y+ +R+ +GDE K       G FE+L+MP+G++ AP+ F   +N +  E  +  VV Y+DDI+++S +  EH  H++ V QKLK   L + +
Subjt:  SKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKR

Query:  EKCSFAQERINFLGHVIEYSRIGMEEGKIATIRDWQ
         KC F Q ++ F+G+ I        +  I  +  W+
Subjt:  EKCSFAQERINFLGHVIEYSRIGMEEGKIATIRDWQ

P0CT41 Transposon Tf2-12 polyprotein2.9e-4135.59Show/hide
Query:  IDHEIELVPE-AKSPAKNAYRMAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYF
        ++ E+EL  E  + P +N Y + P ++  +  ++++ L +G IR  KA    PV+F  KK+G+LR+ +DY  LNK    N YPLP+I  L  ++ G+  F
Subjt:  IDHEIELVPE-AKSPAKNAYRMAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYF

Query:  SKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKR
        +KLDL+S Y+ +R+ +GDE K       G FE+L+MP+G++ AP+ F   +N +  E  +  VV Y+DDI+++S +  EH  H++ V QKLK   L + +
Subjt:  SKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKR

Query:  EKCSFAQERINFLGHVIEYSRIGMEEGKIATIRDWQ
         KC F Q ++ F+G+ I        +  I  +  W+
Subjt:  EKCSFAQERINFLGHVIEYSRIGMEEGKIATIRDWQ

P31843 RNA-directed DNA polymerase homolog1.2e-4770.31Show/hide
Query:  SLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKF
        SLR+CIDY AL K+T++NKYP+P + DLFDRL  A +F+KLDLRSGY+QVRIA+GDEPKTTCVTRYG+FEF +MPFGLTNA +TFC LMN V YEYLD F
Subjt:  SLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKF

Query:  VVVYLDDIVV---YSTTMEEHRDHLQKV
        VVVYLDD+VV   YS ++ EH  HL+ V
Subjt:  VVVYLDDIVV---YSTTMEEHRDHLQKV

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein1.2e-5043.16Show/hide
Query:  IDHEIELVPEAKSPAKNAYRMAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYFS
        + H+IE+ P A+ P    Y +      E+ K + +LL+  FI P K+P  +PV+   KKDG+ RLC+DY  LNK T+ + +PLP I +L  R+  A+ F+
Subjt:  IDHEIELVPEAKSPAKNAYRMAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYFS

Query:  KLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKRE
         LDL SGY+Q+ +   D  KT  VT  G +E+ +MPFGL NAPSTF   M   F +   +FV VYLDDI+++S + EEH  HL  V ++LK   L VK++
Subjt:  KLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKRE

Query:  KCSFAQERINFLGHVIEYSRIGMEEGKIATIRDW
        KC FA E   FLG+ I   +I   + K A IRD+
Subjt:  KCSFAQERINFLGHVIEYSRIGMEEGKIATIRDW

Q99315 Transposon Ty3-G Gag-Pol polyprotein1.2e-5043.16Show/hide
Query:  IDHEIELVPEAKSPAKNAYRMAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYFS
        + H+IE+ P A+ P    Y +      E+ K + +LL+  FI P K+P  +PV+   KKDG+ RLC+DY  LNK T+ + +PLP I +L  R+  A+ F+
Subjt:  IDHEIELVPEAKSPAKNAYRMAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYFS

Query:  KLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKRE
         LDL SGY+Q+ +   D  KT  VT  G +E+ +MPFGL NAPSTF   M   F +   +FV VYLDDI+++S + EEH  HL  V ++LK   L VK++
Subjt:  KLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKRE

Query:  KCSFAQERINFLGHVIEYSRIGMEEGKIATIRDW
        KC FA E   FLG+ I   +I   + K A IRD+
Subjt:  KCSFAQERINFLGHVIEYSRIGMEEGKIATIRDW

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGATCATGAGATCGAGTTGGTGCCAGAGGCAAAATCGCCTGCAAAGAATGCTTATCGTATGGCGCCTCCGGAGTTAGCTGAACTTCGGAAACAGTTAGATGAGTT
ACTGAATGCAGGGTTCATTAGGCCTGAAAAAGCTCCGTATGGGGCCCCAGTTCTTTTCCAGAAGAAGAAAGATGGGAGTTTACGATTGTGCATTGATTATCATGCCCTGA
ATAAGCTCACAGTTCGTAACAAGTATCCACTTCCCATAATTACTGACTTGTTCGATCGCTTACATGGGGCGAAGTATTTTTCAAAGTTAGACTTGCGGTCGGGATACTAC
CAAGTGAGAATTGCAGAGGGAGATGAGCCGAAGACAACCTGTGTCACCCGATATGGTGCGTTCGAATTCCTTATAATGCCATTTGGTCTCACCAATGCCCCTTCAACCTT
CTGTACATTAATGAACCAGGTCTTCTACGAATATCTCGATAAATTCGTAGTAGTCTACCTGGATGATATAGTGGTCTATAGTACGACCATGGAGGAACATAGAGACCACC
TGCAAAAGGTTTTTCAGAAATTGAAGGAGAATCAACTGTATGTCAAAAGAGAAAAATGCTCTTTTGCACAAGAGCGGATAAACTTCTTGGGCCATGTGATAGAGTATAGC
CGAATTGGAATGGAAGAAGGGAAGATTGCTACGATACGCGACTGGCAATGTCGAAATCAGTCTCAGAGTTACGCTCCTTTCTCGGACTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATCGATCATGAGATCGAGTTGGTGCCAGAGGCAAAATCGCCTGCAAAGAATGCTTATCGTATGGCGCCTCCGGAGTTAGCTGAACTTCGGAAACAGTTAGATGAGTT
ACTGAATGCAGGGTTCATTAGGCCTGAAAAAGCTCCGTATGGGGCCCCAGTTCTTTTCCAGAAGAAGAAAGATGGGAGTTTACGATTGTGCATTGATTATCATGCCCTGA
ATAAGCTCACAGTTCGTAACAAGTATCCACTTCCCATAATTACTGACTTGTTCGATCGCTTACATGGGGCGAAGTATTTTTCAAAGTTAGACTTGCGGTCGGGATACTAC
CAAGTGAGAATTGCAGAGGGAGATGAGCCGAAGACAACCTGTGTCACCCGATATGGTGCGTTCGAATTCCTTATAATGCCATTTGGTCTCACCAATGCCCCTTCAACCTT
CTGTACATTAATGAACCAGGTCTTCTACGAATATCTCGATAAATTCGTAGTAGTCTACCTGGATGATATAGTGGTCTATAGTACGACCATGGAGGAACATAGAGACCACC
TGCAAAAGGTTTTTCAGAAATTGAAGGAGAATCAACTGTATGTCAAAAGAGAAAAATGCTCTTTTGCACAAGAGCGGATAAACTTCTTGGGCCATGTGATAGAGTATAGC
CGAATTGGAATGGAAGAAGGGAAGATTGCTACGATACGCGACTGGCAATGTCGAAATCAGTCTCAGAGTTACGCTCCTTTCTCGGACTGGTAA
Protein sequenceShow/hide protein sequence
MIDHEIELVPEAKSPAKNAYRMAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYY
QVRIAEGDEPKTTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIEYS
RIGMEEGKIATIRDWQCRNQSQSYAPFSDW