; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc07g0185111 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc07g0185111
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTransposon Ty3-I Gag-Pol polyprotein
Genome locationCMiso1.1chr07:3147603..3148343
RNA-Seq ExpressionCmc07g0185111
SyntenyCmc07g0185111
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057271.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]2.4e-13095.88Show/hide
Query:  MVEKDIPKTTFRTHEGHYEFLIMPFGLTNAPTTFQALMNVVFKPYLRKFVLVFFDDILVYNKNEDEHVVHLGKVLSSLREHSLYANKKCSFAQPKIEYLG
        MVEKDIPKT FRTHEGHYEFLIMPFGLTNA  TFQALMNVVFKPYLRKFVLVFFDDILVY+KNEDEHVVHLGKVLSSLREHSLYANKKCSFAQPKIEYLG
Subjt:  MVEKDIPKTTFRTHEGHYEFLIMPFGLTNAPTTFQALMNVVFKPYLRKFVLVFFDDILVYNKNEDEHVVHLGKVLSSLREHSLYANKKCSFAQPKIEYLG

Query:  HIISGGGVEVDLEKIRSIADWPTPTNVREIRGFLGLTGHYRRFVKHYGSIATPLIQLLKKGGFVWNKEAEEAFERLKSAMISLPVLALPNFEQPFEIETD
        HIISGGGVEVD EKIRSI DWPTPTNVREIRGFLGLTG+YRRFVKHYGSIA PLIQLLKKGGFVWNKEAEEAFERLKSAMISLPVLALPNFEQPFEIETD
Subjt:  HIISGGGVEVDLEKIRSIADWPTPTNVREIRGFLGLTGHYRRFVKHYGSIATPLIQLLKKGGFVWNKEAEEAFERLKSAMISLPVLALPNFEQPFEIETD

Query:  ASGVGVDAVLTRMNKPIAFYSHTLAMWDRAKLVYERELMAVIL
        A GVGVDAVLTRMNKPIAFYSHTLAMWDRAK VYERELMAVIL
Subjt:  ASGVGVDAVLTRMNKPIAFYSHTLAMWDRAKLVYERELMAVIL

KAA0062661.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]2.5e-11987.85Show/hide
Query:  MVEKDIPKTTFRTHEGHYEFLIMPFGLTNAPTTFQALMNVVFKPYLRKFVLVFFDDILVYNKNEDEHVVHLGKVLSSLREHSLYAN-KKCSFAQPKIEYL
        MVEKDIPKT FRTHEGHYEFL+MPFGLTNAP TFQ LMN VFKPYLRKFVLVFFDDILVY+KNED+H+VHLGKVLSSLREHSLYAN KKCSFAQ K+EYL
Subjt:  MVEKDIPKTTFRTHEGHYEFLIMPFGLTNAPTTFQALMNVVFKPYLRKFVLVFFDDILVYNKNEDEHVVHLGKVLSSLREHSLYAN-KKCSFAQPKIEYL

Query:  GHIISGGGVEVDLEKIRSIADWPTPTNVREIRGFLGLTGHYRRFVKHYGSIATPLIQLLKKGGFVWNKEAEEAFERLKSAMISLPVLALPNFEQPFEIET
        GHIISG GVEVD EKIRSIA WPT TNVRE +GFLGLTG+ RRFVKHYGSIA PL QLLKKGGF WNKEAEEAFE+LK AMISLPVLALPNFEQPFEIET
Subjt:  GHIISGGGVEVDLEKIRSIADWPTPTNVREIRGFLGLTGHYRRFVKHYGSIATPLIQLLKKGGFVWNKEAEEAFERLKSAMISLPVLALPNFEQPFEIET

Query:  DASGVGVDAVLTRMNKPIAFYSHTLAMWDRAKLVYERELMAVILAVQ
        DASGVGV AVLT+MNKPIAFYSHTLAM DRAK VYERE MAV+LAVQ
Subjt:  DASGVGVDAVLTRMNKPIAFYSHTLAMWDRAKLVYERELMAVILAVQ

KAA0066683.1 disease resistance protein [Cucumis melo var. makuwa]7.0e-13899.59Show/hide
Query:  MVEKDIPKTTFRTHEGHYEFLIMPFGLTNAPTTFQALMNVVFKPYLRKFVLVFFDDILVYNKNEDEHVVHLGKVLSSLREHSLYANKKCSFAQPKIEYLG
        MVEKDIPKTTFRTHEGHYEFLIMPFGLTNAPTTFQALMNVVFKPYLRKFVLVFFDDILVYNKNEDEHVVHLGKVLSSLREHSLYANKKCSFAQPKIEYLG
Subjt:  MVEKDIPKTTFRTHEGHYEFLIMPFGLTNAPTTFQALMNVVFKPYLRKFVLVFFDDILVYNKNEDEHVVHLGKVLSSLREHSLYANKKCSFAQPKIEYLG

Query:  HIISGGGVEVDLEKIRSIADWPTPTNVREIRGFLGLTGHYRRFVKHYGSIATPLIQLLKKGGFVWNKEAEEAFERLKSAMISLPVLALPNFEQPFEIETD
        HIISGGGVEVDLEKIRSIADWPTPTNVREIRGFLGLTGHYRRFVKHYGSIATPLIQLLKKGGFVWNKEAEEAFERLKSAMISLPVLALPNFEQPFEIETD
Subjt:  HIISGGGVEVDLEKIRSIADWPTPTNVREIRGFLGLTGHYRRFVKHYGSIATPLIQLLKKGGFVWNKEAEEAFERLKSAMISLPVLALPNFEQPFEIETD

Query:  ASGVGVDAVLTRMNKPIAFYSHTLAMWDRAKLVYERELMAVILAVQ
        A GVGVDAVLTRMNKPIAFYSHTLAMWDRAKLVYERELMAVILAVQ
Subjt:  ASGVGVDAVLTRMNKPIAFYSHTLAMWDRAKLVYERELMAVILAVQ

TYK01195.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]2.5e-11987.85Show/hide
Query:  MVEKDIPKTTFRTHEGHYEFLIMPFGLTNAPTTFQALMNVVFKPYLRKFVLVFFDDILVYNKNEDEHVVHLGKVLSSLREHSLYAN-KKCSFAQPKIEYL
        MVEKDIPKT FRTHEGHYEFL+MPFGLTNAP TFQ LMN VFKPYLRKFVLVFFDDILVY+KNED+H+VHLGKVLSSLREHSLYAN KKCSFAQ K+EYL
Subjt:  MVEKDIPKTTFRTHEGHYEFLIMPFGLTNAPTTFQALMNVVFKPYLRKFVLVFFDDILVYNKNEDEHVVHLGKVLSSLREHSLYAN-KKCSFAQPKIEYL

Query:  GHIISGGGVEVDLEKIRSIADWPTPTNVREIRGFLGLTGHYRRFVKHYGSIATPLIQLLKKGGFVWNKEAEEAFERLKSAMISLPVLALPNFEQPFEIET
        GHIISG GVEVD EKIRSIA WPT TNVRE +GFLGLTG+ RRFVKHYGSIA PL QLLKKGGF WNKEAEEAFE+LK AMISLPVLALPNFEQPFEIET
Subjt:  GHIISGGGVEVDLEKIRSIADWPTPTNVREIRGFLGLTGHYRRFVKHYGSIATPLIQLLKKGGFVWNKEAEEAFERLKSAMISLPVLALPNFEQPFEIET

Query:  DASGVGVDAVLTRMNKPIAFYSHTLAMWDRAKLVYERELMAVILAVQ
        DASGVGV AVLT+MNKPIAFYSHTLAM DRAK VYERE MAV+LAVQ
Subjt:  DASGVGVDAVLTRMNKPIAFYSHTLAMWDRAKLVYERELMAVILAVQ

TYK27013.1 Transposon Tf2-9 polyprotein [Cucumis melo var. makuwa]1.5e-11987.85Show/hide
Query:  MVEKDIPKTTFRTHEGHYEFLIMPFGLTNAPTTFQALMNVVFKPYLRKFVLVFFDDILVYNKNEDEHVVHLGKVLSSLREHSLYAN-KKCSFAQPKIEYL
        MVEKDIPKT FRTHEGHYEFL+MPFGLTNAP TFQALMN VFKPYLRKFVLVFFDDILVY+KNED+HVVHLGKVLSSLREHSL+AN KKCSFAQ K+EYL
Subjt:  MVEKDIPKTTFRTHEGHYEFLIMPFGLTNAPTTFQALMNVVFKPYLRKFVLVFFDDILVYNKNEDEHVVHLGKVLSSLREHSLYAN-KKCSFAQPKIEYL

Query:  GHIISGGGVEVDLEKIRSIADWPTPTNVREIRGFLGLTGHYRRFVKHYGSIATPLIQLLKKGGFVWNKEAEEAFERLKSAMISLPVLALPNFEQPFEIET
        GHIISG GVEVD +KIRSIADWPT TNVRE RGFLGL G+YRRFVKHYGSI  PL QLLKKGGF WNKEAEEAFE+LK AMISLPVLALPNFEQPFEIET
Subjt:  GHIISGGGVEVDLEKIRSIADWPTPTNVREIRGFLGLTGHYRRFVKHYGSIATPLIQLLKKGGFVWNKEAEEAFERLKSAMISLPVLALPNFEQPFEIET

Query:  DASGVGVDAVLTRMNKPIAFYSHTLAMWDRAKLVYERELMAVILAVQ
        DASGV + AVLT+MNKPIAFYSHTLAM DRAK VYERELMAV+LAVQ
Subjt:  DASGVGVDAVLTRMNKPIAFYSHTLAMWDRAKLVYERELMAVILAVQ

TrEMBL top hitse value%identityAlignment
A0A5A7UUU5 Transposon Ty3-I Gag-Pol polyprotein1.2e-13095.88Show/hide
Query:  MVEKDIPKTTFRTHEGHYEFLIMPFGLTNAPTTFQALMNVVFKPYLRKFVLVFFDDILVYNKNEDEHVVHLGKVLSSLREHSLYANKKCSFAQPKIEYLG
        MVEKDIPKT FRTHEGHYEFLIMPFGLTNA  TFQALMNVVFKPYLRKFVLVFFDDILVY+KNEDEHVVHLGKVLSSLREHSLYANKKCSFAQPKIEYLG
Subjt:  MVEKDIPKTTFRTHEGHYEFLIMPFGLTNAPTTFQALMNVVFKPYLRKFVLVFFDDILVYNKNEDEHVVHLGKVLSSLREHSLYANKKCSFAQPKIEYLG

Query:  HIISGGGVEVDLEKIRSIADWPTPTNVREIRGFLGLTGHYRRFVKHYGSIATPLIQLLKKGGFVWNKEAEEAFERLKSAMISLPVLALPNFEQPFEIETD
        HIISGGGVEVD EKIRSI DWPTPTNVREIRGFLGLTG+YRRFVKHYGSIA PLIQLLKKGGFVWNKEAEEAFERLKSAMISLPVLALPNFEQPFEIETD
Subjt:  HIISGGGVEVDLEKIRSIADWPTPTNVREIRGFLGLTGHYRRFVKHYGSIATPLIQLLKKGGFVWNKEAEEAFERLKSAMISLPVLALPNFEQPFEIETD

Query:  ASGVGVDAVLTRMNKPIAFYSHTLAMWDRAKLVYERELMAVIL
        A GVGVDAVLTRMNKPIAFYSHTLAMWDRAK VYERELMAVIL
Subjt:  ASGVGVDAVLTRMNKPIAFYSHTLAMWDRAKLVYERELMAVIL

A0A5A7VAG8 Transposon Ty3-I Gag-Pol polyprotein1.2e-11987.85Show/hide
Query:  MVEKDIPKTTFRTHEGHYEFLIMPFGLTNAPTTFQALMNVVFKPYLRKFVLVFFDDILVYNKNEDEHVVHLGKVLSSLREHSLYAN-KKCSFAQPKIEYL
        MVEKDIPKT FRTHEGHYEFL+MPFGLTNAP TFQ LMN VFKPYLRKFVLVFFDDILVY+KNED+H+VHLGKVLSSLREHSLYAN KKCSFAQ K+EYL
Subjt:  MVEKDIPKTTFRTHEGHYEFLIMPFGLTNAPTTFQALMNVVFKPYLRKFVLVFFDDILVYNKNEDEHVVHLGKVLSSLREHSLYAN-KKCSFAQPKIEYL

Query:  GHIISGGGVEVDLEKIRSIADWPTPTNVREIRGFLGLTGHYRRFVKHYGSIATPLIQLLKKGGFVWNKEAEEAFERLKSAMISLPVLALPNFEQPFEIET
        GHIISG GVEVD EKIRSIA WPT TNVRE +GFLGLTG+ RRFVKHYGSIA PL QLLKKGGF WNKEAEEAFE+LK AMISLPVLALPNFEQPFEIET
Subjt:  GHIISGGGVEVDLEKIRSIADWPTPTNVREIRGFLGLTGHYRRFVKHYGSIATPLIQLLKKGGFVWNKEAEEAFERLKSAMISLPVLALPNFEQPFEIET

Query:  DASGVGVDAVLTRMNKPIAFYSHTLAMWDRAKLVYERELMAVILAVQ
        DASGVGV AVLT+MNKPIAFYSHTLAM DRAK VYERE MAV+LAVQ
Subjt:  DASGVGVDAVLTRMNKPIAFYSHTLAMWDRAKLVYERELMAVILAVQ

A0A5D3BPU7 Transposon Ty3-I Gag-Pol polyprotein1.2e-11987.85Show/hide
Query:  MVEKDIPKTTFRTHEGHYEFLIMPFGLTNAPTTFQALMNVVFKPYLRKFVLVFFDDILVYNKNEDEHVVHLGKVLSSLREHSLYAN-KKCSFAQPKIEYL
        MVEKDIPKT FRTHEGHYEFL+MPFGLTNAP TFQ LMN VFKPYLRKFVLVFFDDILVY+KNED+H+VHLGKVLSSLREHSLYAN KKCSFAQ K+EYL
Subjt:  MVEKDIPKTTFRTHEGHYEFLIMPFGLTNAPTTFQALMNVVFKPYLRKFVLVFFDDILVYNKNEDEHVVHLGKVLSSLREHSLYAN-KKCSFAQPKIEYL

Query:  GHIISGGGVEVDLEKIRSIADWPTPTNVREIRGFLGLTGHYRRFVKHYGSIATPLIQLLKKGGFVWNKEAEEAFERLKSAMISLPVLALPNFEQPFEIET
        GHIISG GVEVD EKIRSIA WPT TNVRE +GFLGLTG+ RRFVKHYGSIA PL QLLKKGGF WNKEAEEAFE+LK AMISLPVLALPNFEQPFEIET
Subjt:  GHIISGGGVEVDLEKIRSIADWPTPTNVREIRGFLGLTGHYRRFVKHYGSIATPLIQLLKKGGFVWNKEAEEAFERLKSAMISLPVLALPNFEQPFEIET

Query:  DASGVGVDAVLTRMNKPIAFYSHTLAMWDRAKLVYERELMAVILAVQ
        DASGVGV AVLT+MNKPIAFYSHTLAM DRAK VYERE MAV+LAVQ
Subjt:  DASGVGVDAVLTRMNKPIAFYSHTLAMWDRAKLVYERELMAVILAVQ

A0A5D3DTQ1 Transposon Tf2-9 polyprotein7.1e-12087.85Show/hide
Query:  MVEKDIPKTTFRTHEGHYEFLIMPFGLTNAPTTFQALMNVVFKPYLRKFVLVFFDDILVYNKNEDEHVVHLGKVLSSLREHSLYAN-KKCSFAQPKIEYL
        MVEKDIPKT FRTHEGHYEFL+MPFGLTNAP TFQALMN VFKPYLRKFVLVFFDDILVY+KNED+HVVHLGKVLSSLREHSL+AN KKCSFAQ K+EYL
Subjt:  MVEKDIPKTTFRTHEGHYEFLIMPFGLTNAPTTFQALMNVVFKPYLRKFVLVFFDDILVYNKNEDEHVVHLGKVLSSLREHSLYAN-KKCSFAQPKIEYL

Query:  GHIISGGGVEVDLEKIRSIADWPTPTNVREIRGFLGLTGHYRRFVKHYGSIATPLIQLLKKGGFVWNKEAEEAFERLKSAMISLPVLALPNFEQPFEIET
        GHIISG GVEVD +KIRSIADWPT TNVRE RGFLGL G+YRRFVKHYGSI  PL QLLKKGGF WNKEAEEAFE+LK AMISLPVLALPNFEQPFEIET
Subjt:  GHIISGGGVEVDLEKIRSIADWPTPTNVREIRGFLGLTGHYRRFVKHYGSIATPLIQLLKKGGFVWNKEAEEAFERLKSAMISLPVLALPNFEQPFEIET

Query:  DASGVGVDAVLTRMNKPIAFYSHTLAMWDRAKLVYERELMAVILAVQ
        DASGV + AVLT+MNKPIAFYSHTLAM DRAK VYERELMAV+LAVQ
Subjt:  DASGVGVDAVLTRMNKPIAFYSHTLAMWDRAKLVYERELMAVILAVQ

A0A5D3DVY0 Disease resistance protein3.4e-13899.59Show/hide
Query:  MVEKDIPKTTFRTHEGHYEFLIMPFGLTNAPTTFQALMNVVFKPYLRKFVLVFFDDILVYNKNEDEHVVHLGKVLSSLREHSLYANKKCSFAQPKIEYLG
        MVEKDIPKTTFRTHEGHYEFLIMPFGLTNAPTTFQALMNVVFKPYLRKFVLVFFDDILVYNKNEDEHVVHLGKVLSSLREHSLYANKKCSFAQPKIEYLG
Subjt:  MVEKDIPKTTFRTHEGHYEFLIMPFGLTNAPTTFQALMNVVFKPYLRKFVLVFFDDILVYNKNEDEHVVHLGKVLSSLREHSLYANKKCSFAQPKIEYLG

Query:  HIISGGGVEVDLEKIRSIADWPTPTNVREIRGFLGLTGHYRRFVKHYGSIATPLIQLLKKGGFVWNKEAEEAFERLKSAMISLPVLALPNFEQPFEIETD
        HIISGGGVEVDLEKIRSIADWPTPTNVREIRGFLGLTGHYRRFVKHYGSIATPLIQLLKKGGFVWNKEAEEAFERLKSAMISLPVLALPNFEQPFEIETD
Subjt:  HIISGGGVEVDLEKIRSIADWPTPTNVREIRGFLGLTGHYRRFVKHYGSIATPLIQLLKKGGFVWNKEAEEAFERLKSAMISLPVLALPNFEQPFEIETD

Query:  ASGVGVDAVLTRMNKPIAFYSHTLAMWDRAKLVYERELMAVILAVQ
        A GVGVDAVLTRMNKPIAFYSHTLAMWDRAKLVYERELMAVILAVQ
Subjt:  ASGVGVDAVLTRMNKPIAFYSHTLAMWDRAKLVYERELMAVILAVQ

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.61.3e-4939.76Show/hide
Query:  MVEKDIPKTTFRTHEGHYEFLIMPFGLTNAPTTFQALMNVVFKPYLRKFVLVFFDDILVYNKNEDEHVVHLGKVLSSLREHSLYAN-KKCSFAQPKIEYL
        M  + + KT F T  GHYE+L MPFGL NAP TFQ  MN + +P L K  LV+ DDI+V++ + DEH+  LG V   L + +L     KC F + +  +L
Subjt:  MVEKDIPKTTFRTHEGHYEFLIMPFGLTNAPTTFQALMNVVFKPYLRKFVLVFFDDILVYNKNEDEHVVHLGKVLSSLREHSLYAN-KKCSFAQPKIEYL

Query:  GHIISGGGVEVDLEKIRSIADWPTPTNVREIRGFLGLTGHYRRFVKHYGSIATPLIQLLKKGGFV--WNKEAEEAFERLKSAMISLPVLALPNFEQPFEI
        GH+++  G++ + EKI +I  +P PT  +EI+ FLGLTG+YR+F+ ++  IA P+ + LKK   +   N E + AF++LK  +   P+L +P+F + F +
Subjt:  GHIISGGGVEVDLEKIRSIADWPTPTNVREIRGFLGLTGHYRRFVKHYGSIATPLIQLLKKGGFV--WNKEAEEAFERLKSAMISLPVLALPNFEQPFEI

Query:  ETDASGVGVDAVLTRMNKPIAFYSHTLAMWDRAKLVYERELMAVILAVQ
         TDAS V + AVL++   P+++ S TL   +      E+EL+A++ A +
Subjt:  ETDASGVGVDAVLTRMNKPIAFYSHTLAMWDRAKLVYERELMAVILAVQ

P10401 Retrovirus-related Pol polyprotein from transposon gypsy2.3e-4335.91Show/hide
Query:  MVEKDIPKTTFRTHEGHYEFLIMPFGLTNAPTTFQALMNVVFKPYLRKFVLVFFDDILVYNKNEDEHVVHLGKVLSSLREHSL-YANKKCSFAQPKIEYL
        + E D  KT+F  + G YEF  +PFGL NA + FQ  ++ V +  + K   V+ DD++++++NE +HV H+  VL  L + ++  + +K  F +  +EYL
Subjt:  MVEKDIPKTTFRTHEGHYEFLIMPFGLTNAPTTFQALMNVVFKPYLRKFVLVFFDDILVYNKNEDEHVVHLGKVLSSLREHSL-YANKKCSFAQPKIEYL

Query:  GHIISGGGVEVDLEKIRSIADWPTPTNVREIRGFLGLTGHYRRFVKHYGSIATPLIQLLK-KGGFV-----------WNKEAEEAFERLKSAMISLPV-L
        G I+S  G + D EK+++I ++P P  V ++R FLGL  +YR F+K + +IA P+  +LK + G V           +N+    AF+RL++ + S  V L
Subjt:  GHIISGGGVEVDLEKIRSIADWPTPTNVREIRGFLGLTGHYRRFVKHYGSIATPLIQLLK-KGGFV-----------WNKEAEEAFERLKSAMISLPV-L

Query:  ALPNFEQPFEIETDASGVGVDAVLTRMNKPIAFYSHTLAMWDRAKLVYERELMAVILAV
          P+F++PF++ TDAS  G+ AVL++  +PI   S TL   ++     EREL+A++ A+
Subjt:  ALPNFEQPFEIETDASGVGVDAVLTRMNKPIAFYSHTLAMWDRAKLVYERELMAVILAV

P20825 Retrovirus-related Pol polyprotein from transposon 2972.3e-5141.37Show/hide
Query:  MVEKDIPKTTFRTHEGHYEFLIMPFGLTNAPTTFQALMNVVFKPYLRKFVLVFFDDILVYNKNEDEHVVHLGKVLSSLREHSLYAN-KKCSFAQPKIEYL
        M E+ I KT F T  GHYE+L MPFGL NAP TFQ  MN + +P L K  LV+ DDI++++ +  EH+  +  V + L + +L     KC F + +  +L
Subjt:  MVEKDIPKTTFRTHEGHYEFLIMPFGLTNAPTTFQALMNVVFKPYLRKFVLVFFDDILVYNKNEDEHVVHLGKVLSSLREHSLYAN-KKCSFAQPKIEYL

Query:  GHIISGGGVEVDLEKIRSIADWPTPTNVREIRGFLGLTGHYRRFVKHYGSIATPLIQLLKKGGFVWNKEAE--EAFERLKSAMISLPVLALPNFEQPFEI
        GHI++  G++ +  K+++I  +P PT  +EIR FLGLTG+YR+F+ +Y  IA P+   LKK   +  ++ E  EAFE+LK+ +I  P+L LP+FE+ F +
Subjt:  GHIISGGGVEVDLEKIRSIADWPTPTNVREIRGFLGLTGHYRRFVKHYGSIATPLIQLLKKGGFVWNKEAE--EAFERLKSAMISLPVLALPNFEQPFEI

Query:  ETDASGVGVDAVLTRMNKPIAFYSHTLAMWDRAKLVYERELMAVILAVQ
         TDAS + + AVL++   PI+F S TL   +      E+EL+A++ A +
Subjt:  ETDASGVGVDAVLTRMNKPIAFYSHTLAMWDRAKLVYERELMAVILAVQ

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein9.4e-3736.11Show/hide
Query:  MVEKDIPKTTFRTHEGHYEFLIMPFGLTNAPTTFQALMNVVFKPYLRKFVLVFFDDILVYNKNEDEHVVHLGKVLSSLR-EHSLYANKKCSFAQPKIEYL
        M  KD  KT F T  G YE+ +MPFGL NAP+TF   M   F+    +FV V+ DDIL+++++ +EH  HL  VL  L+ E+ +   KKC FA  + E+L
Subjt:  MVEKDIPKTTFRTHEGHYEFLIMPFGLTNAPTTFQALMNVVFKPYLRKFVLVFFDDILVYNKNEDEHVVHLGKVLSSLR-EHSLYANKKCSFAQPKIEYL

Query:  GHIISGGGVEVDLEKIRSIADWPTPTNVREIRGFLGLTGHYRRFVKHYGSIATPLIQLLKKGGFVWNKEAEEAFERLKSAMISLPVLALPNFEQPFEIET
        G+ I    +     K  +I D+PTP  V++ + FLG+  +YRRF+ +   IA P IQL       W ++ ++A E+LK+A+ + PVL   N +  + + T
Subjt:  GHIISGGGVEVDLEKIRSIADWPTPTNVREIRGFLGLTGHYRRFVKHYGSIATPLIQLLKKGGFVWNKEAEEAFERLKSAMISLPVLALPNFEQPFEIET

Query:  DASGVGVDAVLTRMNKP------IAFYSHTLAMWDRAKLVYERELMAVILAV
        DAS  G+ AVL  ++        + ++S +L    +     E EL+ +I A+
Subjt:  DASGVGVDAVLTRMNKP------IAFYSHTLAMWDRAKLVYERELMAVILAV

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus3.8e-4636.68Show/hide
Query:  MVEKDIPKTTFRTHEGHYEFLIMPFGLTNAPTTFQALMNVVFKPYLRKFVLVFFDDILVYNKNEDEHVVHLGKVLSSLREHSLYAN-KKCSFAQPKIEYL
        M E DIPKT F T  G YEFL +PFGL NAP  FQ +++ + + ++ K   V+ DDI+V++++ D H  +L  VL+SL + +L  N +K  F   ++E+L
Subjt:  MVEKDIPKTTFRTHEGHYEFLIMPFGLTNAPTTFQALMNVVFKPYLRKFVLVFFDDILVYNKNEDEHVVHLGKVLSSLREHSLYAN-KKCSFAQPKIEYL

Query:  GHIISGGGVEVDLEKIRSIADWPTPTNVREIRGFLGLTGHYRRFVKHYGSIATPLIQLLK------------KGGFVWNKEAEEAFERLKSAMISLPVLA
        G+I++  G++ D +K+R+I++ P PT+V+E++ FLG+T +YR+F++ Y  +A PL  L +            K     ++ A ++F  LKS + S  +LA
Subjt:  GHIISGGGVEVDLEKIRSIADWPTPTNVREIRGFLGLTGHYRRFVKHYGSIATPLIQLLK------------KGGFVWNKEAEEAFERLKSAMISLPVLA

Query:  LPNFEQPFEIETDASGVGVDAVLTR----MNKPIAFYSHTLAMWDRAKLVYERELMAVI
         P F +PF + TDAS   + AVL++     ++PIA+ S +L   +      E+E++A+I
Subjt:  LPNFEQPFEIETDASGVGVDAVLTR----MNKPIAFYSHTLAMWDRAKLVYERELMAVI

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein2.2e-3655.81Show/hide
Query:  HLGKVLSSLREHSLYAN-KKCSFAQPKIEYLG--HIISGGGVEVDLEKIRSIADWPTPTNVREIRGFLGLTGHYRRFVKHYGSIATPLIQLLKKGGFVWN
        HLG VL    +H  YAN KKC+F QP+I YLG  HIISG GV  D  K+ ++  WP P N  E+RGFLGLTG+YRRFVK+YG I  PL +LLKK    W 
Subjt:  HLGKVLSSLREHSLYAN-KKCSFAQPKIEYLG--HIISGGGVEVDLEKIRSIADWPTPTNVREIRGFLGLTGHYRRFVKHYGSIATPLIQLLKKGGFVWN

Query:  KEAEEAFERLKSAMISLPVLALPNFEQPF
        + A  AF+ LK A+ +LPVLALP+ + PF
Subjt:  KEAEEAFERLKSAMISLPVLALPNFEQPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGAAAAGGATATTCCAAAAACAACATTTAGAACTCATGAGGGACATTATGAGTTCCTCATCATGCCATTTGGTTTGACTAATGCACCGACCACATTCCAAGCTTT
GATGAATGTTGTTTTCAAACCTTACTTGAGGAAGTTTGTTTTGGTGTTTTTTGATGATATATTGGTCTACAACAAGAACGAAGATGAGCATGTAGTTCACTTGGGGAAAG
TTCTTTCTTCGTTGAGGGAACATTCTTTATATGCTAATAAGAAGTGCAGCTTTGCACAACCGAAGATTGAGTATCTGGGACACATTATATCAGGAGGGGGAGTTGAGGTA
GACTTAGAGAAGATTCGTTCTATTGCTGATTGGCCCACACCAACGAATGTTAGAGAAATTCGTGGATTTCTTGGCTTAACTGGTCATTATAGGCGATTTGTTAAACATTA
TGGTTCTATAGCGACACCATTGATCCAATTGCTCAAGAAAGGAGGATTTGTGTGGAATAAAGAGGCTGAAGAGGCGTTTGAAAGATTGAAGAGTGCCATGATCTCATTGC
CAGTGTTAGCTCTTCCAAACTTTGAACAACCCTTCGAGATAGAAACAGATGCTTCAGGGGTTGGAGTGGATGCTGTTTTAACACGGATGAACAAGCCTATTGCATTTTAT
AGTCATACATTGGCTATGTGGGATAGGGCAAAACTAGTTTATGAAAGGGAACTGATGGCTGTCATACTTGCAGTCCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGAAAAGGATATTCCAAAAACAACATTTAGAACTCATGAGGGACATTATGAGTTCCTCATCATGCCATTTGGTTTGACTAATGCACCGACCACATTCCAAGCTTT
GATGAATGTTGTTTTCAAACCTTACTTGAGGAAGTTTGTTTTGGTGTTTTTTGATGATATATTGGTCTACAACAAGAACGAAGATGAGCATGTAGTTCACTTGGGGAAAG
TTCTTTCTTCGTTGAGGGAACATTCTTTATATGCTAATAAGAAGTGCAGCTTTGCACAACCGAAGATTGAGTATCTGGGACACATTATATCAGGAGGGGGAGTTGAGGTA
GACTTAGAGAAGATTCGTTCTATTGCTGATTGGCCCACACCAACGAATGTTAGAGAAATTCGTGGATTTCTTGGCTTAACTGGTCATTATAGGCGATTTGTTAAACATTA
TGGTTCTATAGCGACACCATTGATCCAATTGCTCAAGAAAGGAGGATTTGTGTGGAATAAAGAGGCTGAAGAGGCGTTTGAAAGATTGAAGAGTGCCATGATCTCATTGC
CAGTGTTAGCTCTTCCAAACTTTGAACAACCCTTCGAGATAGAAACAGATGCTTCAGGGGTTGGAGTGGATGCTGTTTTAACACGGATGAACAAGCCTATTGCATTTTAT
AGTCATACATTGGCTATGTGGGATAGGGCAAAACTAGTTTATGAAAGGGAACTGATGGCTGTCATACTTGCAGTCCAATGA
Protein sequenceShow/hide protein sequence
MVEKDIPKTTFRTHEGHYEFLIMPFGLTNAPTTFQALMNVVFKPYLRKFVLVFFDDILVYNKNEDEHVVHLGKVLSSLREHSLYANKKCSFAQPKIEYLGHIISGGGVEV
DLEKIRSIADWPTPTNVREIRGFLGLTGHYRRFVKHYGSIATPLIQLLKKGGFVWNKEAEEAFERLKSAMISLPVLALPNFEQPFEIETDASGVGVDAVLTRMNKPIAFY
SHTLAMWDRAKLVYERELMAVILAVQ