; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc07g0185281 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc07g0185281
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description50S ribosomal protein L13
Genome locationCMiso1.1chr07:3337406..3340979
RNA-Seq ExpressionCmc07g0185281
SyntenyCmc07g0185281
Gene Ontology termsGO:0017148 - negative regulation of translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005822 - Ribosomal protein L13
IPR005823 - Ribosomal protein L13, bacterial-type
IPR023563 - Ribosomal protein L13, conserved site
IPR036899 - Ribosomal protein L13 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146016.1 50S ribosomal protein L13, chloroplastic [Cucumis sativus]6.8e-13396.37Show/hide
Query:  MAMLCASSSTPTFSLHSSLTNGTTSNRSIPTNSLLVAFPLPHSKSSFLLTQTTIPLTSNSKRSALRVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTFSLHS+LTNGTTSN+S P NSLLVAFPLPHSKSSFLLTQT+I LTSNSKRSAL+VRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSSLTNGTTSNRSIPTNSLLVAFPLPHSKSSFLLTQTTIPLTSNSKRSALRVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEK+AVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

XP_008463780.1 PREDICTED: 50S ribosomal protein L13, chloroplastic [Cucumis melo]4.6e-137100Show/hide
Query:  MAMLCASSSTPTFSLHSSLTNGTTSNRSIPTNSLLVAFPLPHSKSSFLLTQTTIPLTSNSKRSALRVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTFSLHSSLTNGTTSNRSIPTNSLLVAFPLPHSKSSFLLTQTTIPLTSNSKRSALRVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSSLTNGTTSNRSIPTNSLLVAFPLPHSKSSFLLTQTTIPLTSNSKRSALRVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

XP_022941245.1 50S ribosomal protein L13, chloroplastic-like [Cucurbita moschata]2.9e-12390.32Show/hide
Query:  MAMLCASSSTPTFSLHSSLTNGTTSNRSIPTNSLLVAFPLPHSKSSFLLTQTTIPLTSNSKRSALRVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TFSLHS+L N   SNR+IP  SL+  FPLP SKSSFL TQTTI LTS  K S  +VRAQELDRVPLEQRWMFEGDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSSLTNGTTSNRSIPTNSLLVAFPLPHSKSSFLLTQTTIPLTSNSKRSALRVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSG+KRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

XP_023524699.1 50S ribosomal protein L13, chloroplastic-like [Cucurbita pepo subsp. pepo]3.7e-12390.32Show/hide
Query:  MAMLCASSSTPTFSLHSSLTNGTTSNRSIPTNSLLVAFPLPHSKSSFLLTQTTIPLTSNSKRSALRVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TFSLHS+L NG  SNR++P  SL+  FPL  SKSSFL TQTTI LTS  K S L+VRAQELDRVPLEQRWMFEGDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSSLTNGTTSNRSIPTNSLLVAFPLPHSKSSFLLTQTTIPLTSNSKRSALRVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSG+KRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

XP_038896211.1 50S ribosomal protein L13, chloroplastic [Benincasa hispida]4.9e-12391.09Show/hide
Query:  MAMLCASSSTPTFSLHSSLTNGTTSNRSIPTNSLLVAFPLPHSKSSFLLTQTTIPLTSNSKRSALRVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MA+LCASSSTPTFSLHS+LTNG+T+NR+IP NSL     LPHSKSSFLLT TTI L SN + S L++RAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSSLTNGTTSNRSIPTNSLLVAFPLPHSKSSFLLTQTTIPLTSNSKRSALRVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKE
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRI K+
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKE

TrEMBL top hitse value%identityAlignment
A0A0A0KZG1 Uncharacterized protein3.3e-13396.37Show/hide
Query:  MAMLCASSSTPTFSLHSSLTNGTTSNRSIPTNSLLVAFPLPHSKSSFLLTQTTIPLTSNSKRSALRVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTFSLHS+LTNGTTSN+S P NSLLVAFPLPHSKSSFLLTQT+I LTSNSKRSAL+VRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSSLTNGTTSNRSIPTNSLLVAFPLPHSKSSFLLTQTTIPLTSNSKRSALRVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEK+AVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

A0A1S3CK07 50S ribosomal protein L13, chloroplastic2.2e-137100Show/hide
Query:  MAMLCASSSTPTFSLHSSLTNGTTSNRSIPTNSLLVAFPLPHSKSSFLLTQTTIPLTSNSKRSALRVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTFSLHSSLTNGTTSNRSIPTNSLLVAFPLPHSKSSFLLTQTTIPLTSNSKRSALRVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSSLTNGTTSNRSIPTNSLLVAFPLPHSKSSFLLTQTTIPLTSNSKRSALRVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

A0A6J1F6Z3 50S ribosomal protein L13, chloroplastic-like3.4e-12289.52Show/hide
Query:  MAMLCASSSTPTFSLHSSLTNGTTSNRSIPTNSLLVAFPLPHSKSSFLLTQTTIPLTSNSKRSALRVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTF +HS+L NG+ SNR IP  S +  FPLP SKS  L TQTTI L S SK S ++VRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSSLTNGTTSNRSIPTNSLLVAFPLPHSKSSFLLTQTTIPLTSNSKRSALRVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KA DHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSG+KRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

A0A6J1FT16 50S ribosomal protein L13, chloroplastic-like1.4e-12390.32Show/hide
Query:  MAMLCASSSTPTFSLHSSLTNGTTSNRSIPTNSLLVAFPLPHSKSSFLLTQTTIPLTSNSKRSALRVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TFSLHS+L N   SNR+IP  SL+  FPLP SKSSFL TQTTI LTS  K S  +VRAQELDRVPLEQRWMFEGDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSSLTNGTTSNRSIPTNSLLVAFPLPHSKSSFLLTQTTIPLTSNSKRSALRVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSG+KRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

A0A6J1IW42 50S ribosomal protein L13, chloroplastic-like5.8e-12289.11Show/hide
Query:  MAMLCASSSTPTFSLHSSLTNGTTSNRSIPTNSLLVAFPLPHSKSSFLLTQTTIPLTSNSKRSALRVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TFSLHS+  N   SNR+IP  SL+  FPLP SKSSFL TQTTI LTS  K S  +VRAQELDRVPLEQRWMFEGDE+DGPDIWN TWYP
Subjt:  MAMLCASSSTPTFSLHSSLTNGTTSNRSIPTNSLLVAFPLPHSKSSFLLTQTTIPLTSNSKRSALRVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KA DHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSG+KRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

SwissProt top hitse value%identityAlignment
B8HMT1 50S ribosomal protein L131.5e-5067.81Show/hide
Query:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIP
        NKT+ P      + E  WYVVDAT++ LGRLA+ IA  +RGK  P YTPS+D G FVIVVNAEKVAV+GKKRTQK+YRRHSGRPGGM  ETF +LQ R+P
Subjt:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIP

Query:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIR
        ERIIEHAV+GMLPK  LGR LF  LKVY GPDHPH+AQKP  L ++
Subjt:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIR

P12629 50S ribosomal protein L13, chloroplastic3.4e-7963.75Show/hide
Query:  MLCASSST-PTFSLHSSL--TN-GTTSNRSIPTNSLLVAFPLPHSKSSFLLTQTTIPLTSNSKRSALRVRAQ-ELDRVPLEQRWMFEGDELDGPDIWNKT
        M CASS T P+     S   TN   T   S P  ++  A  +   KS    T  +   T   ++    V+ +  +  VPL+QRWMF  +E  GPDIWN T
Subjt:  MLCASSST-PTFSLHSSL--TN-GTTSNRSIPTNSLLVAFPLPHSKSSFLLTQTTIPLTSNSKRSALRVRAQ-ELDRVPLEQRWMFEGDELDGPDIWNKT

Query:  WYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERI
        WYPK+ADHV T+K WYVVDATD ILGR+ASTIA HIRGK+L +YTPSVDMGAFVIVVNA+KVAVSGKKRTQKLYRRHSGRPGG+  ETFDQLQ+RIPERI
Subjt:  WYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERI

Query:  IEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        IEHAVRGMLPKGRLGR LFNHLKVYKG +HPH+AQ+P++LP+RDKRI  E+
Subjt:  IEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

Q3MF94 50S ribosomal protein L133.4e-5068.97Show/hide
Query:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIP
        +KT+ P      + E+ WYVVDATDK LGRLAS IA  +RGK+   YTP +D G FVIVVNAEKVAV+GKKRTQKLYRRHSGRPGGM  ETF +LQQR+P
Subjt:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIP

Query:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPI
        ERI+EHAV+GMLPK  LG+ LF  LKVY GP HPH+AQKP EL I
Subjt:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPI

Q8YPK6 50S ribosomal protein L139.8e-5068.28Show/hide
Query:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIP
        +KT+ P      + E+ WYVVDATDK LGRLAS IA  +RGK+   YTP +D G FVIVVNA+KVAV+GKKRTQKLYRRHSGRPGGM  ETF +LQQR+P
Subjt:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIP

Query:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPI
        ERI+EHAV+GMLPK  LG+ LF  LKVY GP HPH+AQKP EL I
Subjt:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPI

Q9SYL9 50S ribosomal protein L13, chloroplastic2.8e-8968.38Show/hide
Query:  MAMLCASSSTPTFSLHSSLTNGTTSNRSIPTNSLLVAFPLPHSKSSFLLTQTTIPLTSNSKRSALRVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWN
        MA+LC+SS   T  L SS    + S R  P         L  S ++       + + +NSKR  L+V+ +         VP  QRWMF+ +E +GPDIWN
Subjt:  MAMLCASSSTPTFSLHSSLTNGTTSNRSIPTNSLLVAFPLPHSKSSFLLTQTTIPLTSNSKRSALRVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWN

Query:  KTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPE
         TWYPKA+DHVNT+KPW+VVDATDKILGRLASTIANHIRGK+L +YTPSVDMGAFVIVVNAEKVAVSGKKR QKLYRRHSGRPGGMTVETFDQLQQRIPE
Subjt:  KTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPE

Query:  RIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        RI+EHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKP++LPIRDKRI  ++
Subjt:  RIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

Arabidopsis top hitse value%identityAlignment
AT1G78630.1 Ribosomal protein L13 family protein2.0e-9068.38Show/hide
Query:  MAMLCASSSTPTFSLHSSLTNGTTSNRSIPTNSLLVAFPLPHSKSSFLLTQTTIPLTSNSKRSALRVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWN
        MA+LC+SS   T  L SS    + S R  P         L  S ++       + + +NSKR  L+V+ +         VP  QRWMF+ +E +GPDIWN
Subjt:  MAMLCASSSTPTFSLHSSLTNGTTSNRSIPTNSLLVAFPLPHSKSSFLLTQTTIPLTSNSKRSALRVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWN

Query:  KTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPE
         TWYPKA+DHVNT+KPW+VVDATDKILGRLASTIANHIRGK+L +YTPSVDMGAFVIVVNAEKVAVSGKKR QKLYRRHSGRPGGMTVETFDQLQQRIPE
Subjt:  KTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPE

Query:  RIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        RI+EHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKP++LPIRDKRI  ++
Subjt:  RIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

AT3G01790.1 Ribosomal protein L13 family protein2.7e-1837.6Show/hide
Query:  WYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRL
        W V DA  ++LGRLAS I+  ++ KD PTY P+ D G   IV+NA+++  +G+K T K YR H+G  G +   +      + P  +I  AV  MLP   L
Subjt:  WYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRL

Query:  GRALFNHLKVYKGPDHPHEAQKPVE
               L++++G +HP    KP+E
Subjt:  GRALFNHLKVYKGPDHPHEAQKPVE

AT3G01790.2 Ribosomal protein L13 family protein2.7e-1837.6Show/hide
Query:  WYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRL
        W V DA  ++LGRLAS I+  ++ KD PTY P+ D G   IV+NA+++  +G+K T K YR H+G  G +   +      + P  +I  AV  MLP   L
Subjt:  WYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRL

Query:  GRALFNHLKVYKGPDHPHEAQKPVE
               L++++G +HP    KP+E
Subjt:  GRALFNHLKVYKGPDHPHEAQKPVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGCTCTGTGCTTCCTCCTCTACACCCACTTTCTCTTTACATTCCTCTCTCACCAATGGAACCACAAGTAACAGAAGCATTCCCACAAACTCACTCCTTGTTGC
CTTTCCACTCCCACATTCAAAATCTTCTTTTCTTCTAACCCAGACCACCATTCCTCTAACCTCCAACTCCAAGAGGTCGGCCCTTCGAGTGCGAGCTCAAGAGCTGGATC
GTGTCCCTTTGGAACAACGGTGGATGTTCGAGGGCGACGAGCTCGACGGCCCTGATATATGGAATAAAACGTGGTACCCGAAGGCTGCAGATCATGTGAACACAGAAAAA
CCTTGGTATGTGGTTGATGCCACTGATAAGATTTTGGGAAGACTAGCTTCGACCATTGCCAATCATATCCGAGGGAAGGATTTGCCAACCTATACTCCTAGTGTGGATAT
GGGGGCTTTTGTGATTGTGGTAAATGCAGAAAAAGTTGCGGTGTCTGGTAAAAAGAGGACTCAGAAACTATACAGGAGGCATTCAGGGCGACCGGGTGGTATGACTGTAG
AAACTTTTGACCAGCTACAGCAGAGAATTCCTGAAAGAATTATCGAGCATGCTGTTCGTGGTATGCTTCCAAAAGGGAGGCTTGGAAGAGCACTCTTTAACCACTTGAAG
GTTTACAAAGGACCAGACCATCCACACGAGGCACAAAAGCCAGTTGAGCTGCCAATTAGGGACAAAAGGATAAACAAAGAAAGATAG
mRNA sequenceShow/hide mRNA sequence
CATGTTTTCCCAAAACAATTGGTTAGAAGAAAAATAGTCCCAATGTAGAAGAGAAGTAGTGTTGCGCAAATTTATCCACTCCCCCCGGTTTCCCATTTCTCATCTCCGTA
TTCACAAAGCCTAGAAAGAGTCTTATCCACAATCCATAGCACCAATTCCCCAACTGAAAGAGCCACTGCCAGAGCTACAATGGCGATGCTCTGTGCTTCCTCCTCTACAC
CCACTTTCTCTTTACATTCCTCTCTCACCAATGGAACCACAAGTAACAGAAGCATTCCCACAAACTCACTCCTTGTTGCCTTTCCACTCCCACATTCAAAATCTTCTTTT
CTTCTAACCCAGACCACCATTCCTCTAACCTCCAACTCCAAGAGGTCGGCCCTTCGAGTGCGAGCTCAAGAGCTGGATCGTGTCCCTTTGGAACAACGGTGGATGTTCGA
GGGCGACGAGCTCGACGGCCCTGATATATGGAATAAAACGTGGTACCCGAAGGCTGCAGATCATGTGAACACAGAAAAACCTTGGTATGTGGTTGATGCCACTGATAAGA
TTTTGGGAAGACTAGCTTCGACCATTGCCAATCATATCCGAGGGAAGGATTTGCCAACCTATACTCCTAGTGTGGATATGGGGGCTTTTGTGATTGTGGTAAATGCAGAA
AAAGTTGCGGTGTCTGGTAAAAAGAGGACTCAGAAACTATACAGGAGGCATTCAGGGCGACCGGGTGGTATGACTGTAGAAACTTTTGACCAGCTACAGCAGAGAATTCC
TGAAAGAATTATCGAGCATGCTGTTCGTGGTATGCTTCCAAAAGGGAGGCTTGGAAGAGCACTCTTTAACCACTTGAAGGTTTACAAAGGACCAGACCATCCACACGAGG
CACAAAAGCCAGTTGAGCTGCCAATTAGGGACAAAAGGATAAACAAAGAAAGATAGTATATGAACTACTAAGAGCAAACAATGGACGAAGAGACAACGCTCTCTTGTATG
AGGTTTTCTATGTTCATATAATCGAGTTAGAGTTTCCATGCTTCAACTCAATTTGATATCAGCATTTGTTCTGTAATTTGATTCCAAATTCTAGTATCTTAATCCAAAGT
TGCGTTTGCAAAGTTATTAAATCAGAAGAGGAAATCCTTAAATCTTGCCCGGTTAAAGGTTGTGATAGT
Protein sequenceShow/hide protein sequence
MAMLCASSSTPTFSLHSSLTNGTTSNRSIPTNSLLVAFPLPHSKSSFLLTQTTIPLTSNSKRSALRVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYPKAADHVNTEK
PWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLK
VYKGPDHPHEAQKPVELPIRDKRINKER