; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc07g0185871 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc07g0185871
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationCMiso1.1chr07:3823860..3825555
RNA-Seq ExpressionCmc07g0185871
SyntenyCmc07g0185871
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR025724 - GAG-pre-integrase domain
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037745.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]4.0e-24977.15Show/hide
Query:  MTSNYSLMNTSSHAKSLPPIYAADGNCMNVPHIGTINTPSLNLPHTYRVPNLTFNLVSIGQLCDLGLTVSFSPNGCQVQDPQTGQPIGTGRKVRRLFELL
        MTS+YSLMNT S  KSLPPIYAADGNCMN+ H+GTINTPSLNLPHTY VPNLTFNLVS+GQLCDLG TVSFS NGCQVQDPQTGQ IGTGRKV RLFE+L
Subjt:  MTSNYSLMNTSSHAKSLPPIYAADGNCMNVPHIGTINTPSLNLPHTYRVPNLTFNLVSIGQLCDLGLTVSFSPNGCQVQDPQTGQPIGTGRKVRRLFELL

Query:  SLQVPSPSSISAPVTDSDTNQWHLRLGHASPEKLRHLISVNNLNNVTKFVPFNCLNCKLAKQPVLSFSPSTSICDKPFDLIHSDIWGLAPTITVQGYRYY
        SLQVPSP SISAPVTDSDT QWHLRLGHASPEKLRHLIS+NNLN++TKFVPFNCLNCKLAKQP LSFS STSICDKPFDLIHSDIWG APT TV GYRYY
Subjt:  SLQVPSPSSISAPVTDSDTNQWHLRLGHASPEKLRHLISVNNLNNVTKFVPFNCLNCKLAKQPVLSFSPSTSICDKPFDLIHSDIWGLAPTITVQGYRYY

Query:  VLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIHTQFSCSIKTLCTDNALEYKDSILLSFLSQQGTLVQRSCPYNSQQNGRAERKYRHILDSF-------
        VLFIDDFSRFTWIYFLKHRSELSRTYIEFANMI TQFSC IKTL TDNALEYKDS LLSFLSQQGTLVQRSCP+ SQQNGRAERK+RHILDS        
Subjt:  VLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIHTQFSCSIKTLCTDNALEYKDSILLSFLSQQGTLVQRSCPYNSQQNGRAERKYRHILDSF-------

Query:  --------------------IPSTFFLLLSPFERLYGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARLYCFLGYGTEHKGFRCWDPLSNRLRISRHVT
                            +PS+    +SPFERLYGTPPNYSNLKVFGCACFVLL PHEHTKLEPRARL CFLGYGTEHKGFRCWDPLSNRLRISRHVT
Subjt:  --------------------IPSTFFLLLSPFERLYGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARLYCFLGYGTEHKGFRCWDPLSNRLRISRHVT

Query:  FWEHTMFSHLSSFHSSFSSPQPFFTSTSVELFTLSEPILNTELAQSAPTSANSNQSFVSDDGPEPTLDTPPRCSTR------------------------
        FWEHTMFS LSSFH+SFSSPQ FFT TS++LF LSE     ELAQSAPTSA S+QS +SD  P+P  D PPR STR                        
Subjt:  FWEHTMFSHLSSFHSSFSSPQPFFTSTSVELFTLSEPILNTELAQSAPTSANSNQSFVSDDGPEPTLDTPPRCSTR------------------------

Query:  ------------KAMNDELQALEKTHTWDYVDLPPGKRFIGCKWIYKIKTHSDGTIEHYKARLVAKGYS
                    KAMNDELQALEK HTWDYVDLPPGKR IGCKWIYKIKTHSDGTIE YKARLVAKGYS
Subjt:  ------------KAMNDELQALEKTHTWDYVDLPPGKRFIGCKWIYKIKTHSDGTIEHYKARLVAKGYS

KAA0041601.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.8e-24977.33Show/hide
Query:  MTSNYSLMNTSSHAKSLPPIYAADGNCMNVPHIGTINTPSLNLPHTYRVPNLTFNLVSIGQLCDLGLTVSFSPNGCQVQDPQTGQPIGTGRKVRRLFELL
        MTS+YSLMNT S  KSLPPIYAADGNCMN+ H+GTINTPSLNLPHTY VPNLTFNLVS+GQLCDLG TVSFS NGCQVQDPQTGQ IGTGRKV RLFELL
Subjt:  MTSNYSLMNTSSHAKSLPPIYAADGNCMNVPHIGTINTPSLNLPHTYRVPNLTFNLVSIGQLCDLGLTVSFSPNGCQVQDPQTGQPIGTGRKVRRLFELL

Query:  SLQVPSPSSISAPVTDSDTNQWHLRLGHASPEKLRHLISVNNLNNVTKFVPFNCLNCKLAKQPVLSFSPSTSICDKPFDLIHSDIWGLAPTITVQGYRYY
        SLQVPSP SISAPVTDSDT QWHLRLGHASPEKLRHLIS+NNLN++TKFVPFNCLNCKLAKQP LSFS STSICDKPFDLIHSDIWG APT TV GYRYY
Subjt:  SLQVPSPSSISAPVTDSDTNQWHLRLGHASPEKLRHLISVNNLNNVTKFVPFNCLNCKLAKQPVLSFSPSTSICDKPFDLIHSDIWGLAPTITVQGYRYY

Query:  VLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIHTQFSCSIKTLCTDNALEYKDSILLSFLSQQGTLVQRSCPYNSQQNGRAERKYRHILDSF-------
        VLFIDDFSRFTWIYFLKHRSELSRTYIEFANMI TQFSC IKTL TDNALEYKDS LLSFLSQQGTLVQRSCP+ SQQNGRAERK+RHILDS        
Subjt:  VLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIHTQFSCSIKTLCTDNALEYKDSILLSFLSQQGTLVQRSCPYNSQQNGRAERKYRHILDSF-------

Query:  --------------------IPSTFFLLLSPFERLYGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARLYCFLGYGTEHKGFRCWDPLSNRLRISRHVT
                            +PS+    +SPFERLYGTPPNYSNLKVFGCACFVLL PHEHTKLEPRARL CFLGYGTEHKGFRCWDPLSNRLRISRHVT
Subjt:  --------------------IPSTFFLLLSPFERLYGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARLYCFLGYGTEHKGFRCWDPLSNRLRISRHVT

Query:  FWEHTMFSHLSSFHSSFSSPQPFFTSTSVELFTLSEPILNTELAQSAPTSANSNQSFVSDDGPEPTLDTPPRCSTR------------------------
        FWEHTMFS LSSFH+SFSSPQ FFT TS++LF LSE     ELAQSAPTSA S+QS +SD  P+P  D PPR STR                        
Subjt:  FWEHTMFSHLSSFHSSFSSPQPFFTSTSVELFTLSEPILNTELAQSAPTSANSNQSFVSDDGPEPTLDTPPRCSTR------------------------

Query:  ------------KAMNDELQALEKTHTWDYVDLPPGKRFIGCKWIYKIKTHSDGTIEHYKARLVAKGYS
                    KAMNDELQALEK HTWDYVDLPPGKR IGCKWIYKIKTHSDGTIE YKARLVAKGYS
Subjt:  ------------KAMNDELQALEKTHTWDYVDLPPGKRFIGCKWIYKIKTHSDGTIEHYKARLVAKGYS

TYK04714.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.8e-24977.33Show/hide
Query:  MTSNYSLMNTSSHAKSLPPIYAADGNCMNVPHIGTINTPSLNLPHTYRVPNLTFNLVSIGQLCDLGLTVSFSPNGCQVQDPQTGQPIGTGRKVRRLFELL
        MTS+YSLMNT S  KSLPPIYAADGNCMN+ H+GTINTPSLNLPHTY VPNLTFNLVS+GQLCDLG TVSFS NGCQVQDPQTGQ IGTGRKV RLFELL
Subjt:  MTSNYSLMNTSSHAKSLPPIYAADGNCMNVPHIGTINTPSLNLPHTYRVPNLTFNLVSIGQLCDLGLTVSFSPNGCQVQDPQTGQPIGTGRKVRRLFELL

Query:  SLQVPSPSSISAPVTDSDTNQWHLRLGHASPEKLRHLISVNNLNNVTKFVPFNCLNCKLAKQPVLSFSPSTSICDKPFDLIHSDIWGLAPTITVQGYRYY
        SLQVPSP SISAPVTDSDT QWHLRLGHASPEKLRHLIS+NNLN++TKFVPFNCLNCKLAKQP LSFS STSICDKPFDLIHSDIWG APT TV GYRYY
Subjt:  SLQVPSPSSISAPVTDSDTNQWHLRLGHASPEKLRHLISVNNLNNVTKFVPFNCLNCKLAKQPVLSFSPSTSICDKPFDLIHSDIWGLAPTITVQGYRYY

Query:  VLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIHTQFSCSIKTLCTDNALEYKDSILLSFLSQQGTLVQRSCPYNSQQNGRAERKYRHILDSF-------
        VLFIDDFSRFTWIYFLKHRSELSRTYIEFANMI TQFSC IKTL TDNALEYKDS LLSFLSQQGTLVQRSCP+ SQQNGRAERK+RHILDS        
Subjt:  VLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIHTQFSCSIKTLCTDNALEYKDSILLSFLSQQGTLVQRSCPYNSQQNGRAERKYRHILDSF-------

Query:  --------------------IPSTFFLLLSPFERLYGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARLYCFLGYGTEHKGFRCWDPLSNRLRISRHVT
                            +PS+    +SPFERLYGTPPNYSNLKVFGCACFVLL PHEHTKLEPRARL CFLGYGTEHKGFRCWDPLSNRLRISRHVT
Subjt:  --------------------IPSTFFLLLSPFERLYGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARLYCFLGYGTEHKGFRCWDPLSNRLRISRHVT

Query:  FWEHTMFSHLSSFHSSFSSPQPFFTSTSVELFTLSEPILNTELAQSAPTSANSNQSFVSDDGPEPTLDTPPRCSTR------------------------
        FWEHTMFS LSSFH+SFSSPQ FFT TS++LF LSE     ELAQSAPTSA S+QS +SD  P+P  D PPR STR                        
Subjt:  FWEHTMFSHLSSFHSSFSSPQPFFTSTSVELFTLSEPILNTELAQSAPTSANSNQSFVSDDGPEPTLDTPPRCSTR------------------------

Query:  ------------KAMNDELQALEKTHTWDYVDLPPGKRFIGCKWIYKIKTHSDGTIEHYKARLVAKGYS
                    KAMNDELQALEK HTWDYVDLPPGKR IGCKWIYKIKTHSDGTIE YKARLVAKGYS
Subjt:  ------------KAMNDELQALEKTHTWDYVDLPPGKRFIGCKWIYKIKTHSDGTIEHYKARLVAKGYS

TYK19656.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.8e-24977.33Show/hide
Query:  MTSNYSLMNTSSHAKSLPPIYAADGNCMNVPHIGTINTPSLNLPHTYRVPNLTFNLVSIGQLCDLGLTVSFSPNGCQVQDPQTGQPIGTGRKVRRLFELL
        MTS+YSLMNT S  KSLPPIYAADGNCMN+ H+GTINTPSLNLPHTY VPNLTFNLVS+GQLCDLG TVSFS NGCQVQDPQTGQ IGTGRKV RLFELL
Subjt:  MTSNYSLMNTSSHAKSLPPIYAADGNCMNVPHIGTINTPSLNLPHTYRVPNLTFNLVSIGQLCDLGLTVSFSPNGCQVQDPQTGQPIGTGRKVRRLFELL

Query:  SLQVPSPSSISAPVTDSDTNQWHLRLGHASPEKLRHLISVNNLNNVTKFVPFNCLNCKLAKQPVLSFSPSTSICDKPFDLIHSDIWGLAPTITVQGYRYY
        SLQVPSP SISAPVTDSDT QWHLRLGHASPEKLRHLIS+NNLN++TKFVPFNCLNCKLAKQP LSFS STSICDKPFDLIHSDIWG APT TV GYRYY
Subjt:  SLQVPSPSSISAPVTDSDTNQWHLRLGHASPEKLRHLISVNNLNNVTKFVPFNCLNCKLAKQPVLSFSPSTSICDKPFDLIHSDIWGLAPTITVQGYRYY

Query:  VLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIHTQFSCSIKTLCTDNALEYKDSILLSFLSQQGTLVQRSCPYNSQQNGRAERKYRHILDSF-------
        VLFIDDFSRFTWIYFLKHRSELSRTYIEFANMI TQFSC IKTL TDNALEYKDS LLSFLSQQGTLVQRSCP+ SQQNGRAERK+RHILDS        
Subjt:  VLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIHTQFSCSIKTLCTDNALEYKDSILLSFLSQQGTLVQRSCPYNSQQNGRAERKYRHILDSF-------

Query:  --------------------IPSTFFLLLSPFERLYGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARLYCFLGYGTEHKGFRCWDPLSNRLRISRHVT
                            +PS+    +SPFERLYGTPPNYSNLKVFGCACFVLL PHEHTKLEPRARL CFLGYGTEHKGFRCWDPLSNRLRISRHVT
Subjt:  --------------------IPSTFFLLLSPFERLYGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARLYCFLGYGTEHKGFRCWDPLSNRLRISRHVT

Query:  FWEHTMFSHLSSFHSSFSSPQPFFTSTSVELFTLSEPILNTELAQSAPTSANSNQSFVSDDGPEPTLDTPPRCSTR------------------------
        FWEHTMFS LSSFH+SFSSPQ FFT TS++LF LSE     ELAQSAPTSA S+QS +SD  P+P  D PPR STR                        
Subjt:  FWEHTMFSHLSSFHSSFSSPQPFFTSTSVELFTLSEPILNTELAQSAPTSANSNQSFVSDDGPEPTLDTPPRCSTR------------------------

Query:  ------------KAMNDELQALEKTHTWDYVDLPPGKRFIGCKWIYKIKTHSDGTIEHYKARLVAKGYS
                    KAMNDELQALEK HTWDYVDLPPGKR IGCKWIYKIKTHSDGTIE YKARLVAKGYS
Subjt:  ------------KAMNDELQALEKTHTWDYVDLPPGKRFIGCKWIYKIKTHSDGTIEHYKARLVAKGYS

TYK26360.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.8e-24977.33Show/hide
Query:  MTSNYSLMNTSSHAKSLPPIYAADGNCMNVPHIGTINTPSLNLPHTYRVPNLTFNLVSIGQLCDLGLTVSFSPNGCQVQDPQTGQPIGTGRKVRRLFELL
        MTS+YSLMNT S  KSLPPIYAADGNCMN+ H+GTINTPSLNLPHTY VPNLTFNLVS+GQLCDLG TVSFS NGCQVQDPQTGQ IGTGRKV RLFELL
Subjt:  MTSNYSLMNTSSHAKSLPPIYAADGNCMNVPHIGTINTPSLNLPHTYRVPNLTFNLVSIGQLCDLGLTVSFSPNGCQVQDPQTGQPIGTGRKVRRLFELL

Query:  SLQVPSPSSISAPVTDSDTNQWHLRLGHASPEKLRHLISVNNLNNVTKFVPFNCLNCKLAKQPVLSFSPSTSICDKPFDLIHSDIWGLAPTITVQGYRYY
        SLQVPSP SISAPVTDSDT QWHLRLGHASPEKLRHLIS+NNLN++TKFVPFNCLNCKLAKQP LSFS STSICDKPFDLIHSDIWG APT TV GYRYY
Subjt:  SLQVPSPSSISAPVTDSDTNQWHLRLGHASPEKLRHLISVNNLNNVTKFVPFNCLNCKLAKQPVLSFSPSTSICDKPFDLIHSDIWGLAPTITVQGYRYY

Query:  VLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIHTQFSCSIKTLCTDNALEYKDSILLSFLSQQGTLVQRSCPYNSQQNGRAERKYRHILDSF-------
        VLFIDDFSRFTWIYFLKHRSELSRTYIEFANMI TQFSC IKTL TDNALEYKDS LLSFLSQQGTLVQRSCP+ SQQNGRAERK+RHILDS        
Subjt:  VLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIHTQFSCSIKTLCTDNALEYKDSILLSFLSQQGTLVQRSCPYNSQQNGRAERKYRHILDSF-------

Query:  --------------------IPSTFFLLLSPFERLYGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARLYCFLGYGTEHKGFRCWDPLSNRLRISRHVT
                            +PS+    +SPFERLYGTPPNYSNLKVFGCACFVLL PHEHTKLEPRARL CFLGYGTEHKGFRCWDPLSNRLRISRHVT
Subjt:  --------------------IPSTFFLLLSPFERLYGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARLYCFLGYGTEHKGFRCWDPLSNRLRISRHVT

Query:  FWEHTMFSHLSSFHSSFSSPQPFFTSTSVELFTLSEPILNTELAQSAPTSANSNQSFVSDDGPEPTLDTPPRCSTR------------------------
        FWEHTMFS LSSFH+SFSSPQ FFT TS++LF LSE     ELAQSAPTSA S+QS +SD  P+P  D PPR STR                        
Subjt:  FWEHTMFSHLSSFHSSFSSPQPFFTSTSVELFTLSEPILNTELAQSAPTSANSNQSFVSDDGPEPTLDTPPRCSTR------------------------

Query:  ------------KAMNDELQALEKTHTWDYVDLPPGKRFIGCKWIYKIKTHSDGTIEHYKARLVAKGYS
                    KAMNDELQALEK HTWDYVDLPPGKR IGCKWIYKIKTHSDGTIE YKARLVAKGYS
Subjt:  ------------KAMNDELQALEKTHTWDYVDLPPGKRFIGCKWIYKIKTHSDGTIEHYKARLVAKGYS

TrEMBL top hitse value%identityAlignment
A0A5A7TZC4 Retrovirus-related Pol polyprotein from transposon TNT 1-942.0e-24976.63Show/hide
Query:  MTSNYSLMNTSSHAKSLPPIYAADGNCMNVPHIGTINTPSLNLPHTYRVPNLTFNLVSIGQLCDLGLTVSFSPNGCQVQDPQTGQPIGTGRKVRRLFELL
        MTSNYSLMNT S AKSLPPIYAADGNCMN+ HIGT+NTPS+NLPHTY VPNLTFNLVS+GQLCDLGLTVSFSPNGCQVQDPQTGQ IGTGRKV RLFELL
Subjt:  MTSNYSLMNTSSHAKSLPPIYAADGNCMNVPHIGTINTPSLNLPHTYRVPNLTFNLVSIGQLCDLGLTVSFSPNGCQVQDPQTGQPIGTGRKVRRLFELL

Query:  SLQVPSPSSISAPVTDSDTNQWHLRLGHASPEKLRHLISVNNLNNVTKFVPFNCLNCKLAKQPVLSFSPSTSICDKPFDLIHSDIWGLAPTITVQGYRYY
        SLQVPSPSSIS PVTDSDT QWHLRLGHASPEKLRHLI +N+LN+ TKFVPFNCLNCKLAKQP LSF  STSI DKPFDLIHSDIWG APT TV GYRYY
Subjt:  SLQVPSPSSISAPVTDSDTNQWHLRLGHASPEKLRHLISVNNLNNVTKFVPFNCLNCKLAKQPVLSFSPSTSICDKPFDLIHSDIWGLAPTITVQGYRYY

Query:  VLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIHTQFSCSIKTLCTDNALEYKDSILLSFLSQQGTLVQRSCPYNSQQNGRAERKYRHILDSF-------
        V FIDDFSRFTWIYFLKHRS LSRTYIEFANMI TQFSC IKTL TDNALEYKDS LLSFLSQQGTLVQRSC + SQQNGRAERK+RHILDS        
Subjt:  VLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIHTQFSCSIKTLCTDNALEYKDSILLSFLSQQGTLVQRSCPYNSQQNGRAERKYRHILDSF-------

Query:  --------------------IPSTFFLLLSPFERLYGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARLYCFLGYGTEHKGFRCWDPLSNRLRISRHVT
                            +PS+    +SPFE+LYGTPPNYSNLK FGCACFVLLHPHEHTKLEPRARL CFLGYGTEHKGFRCWDPLSNRLR+SRH+T
Subjt:  --------------------IPSTFFLLLSPFERLYGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARLYCFLGYGTEHKGFRCWDPLSNRLRISRHVT

Query:  FWEHTMFSHLSSFHSSFSSPQPFFTSTSVELFTLSEPILNTELAQSAPTSANSNQSFVSDDGPEPTLDTPPRCSTR------------------------
        FWEHTMFS LSSFH+SFSSPQ FFT+TS++LF  SE  L  ELAQSAPTSA S+QS +SD  PEPT DTPPR STR                        
Subjt:  FWEHTMFSHLSSFHSSFSSPQPFFTSTSVELFTLSEPILNTELAQSAPTSANSNQSFVSDDGPEPTLDTPPRCSTR------------------------

Query:  ------------KAMNDELQALEKTHTWDYVDLPPGKRFIGCKWIYKIKTHSDGTIEHYKARLVAKGYS
                    KAMNDELQALEKTHTWDYVDLPPGKR IGCKWIYKIKTHSDGTIE YKA LVAKGYS
Subjt:  ------------KAMNDELQALEKTHTWDYVDLPPGKRFIGCKWIYKIKTHSDGTIEHYKARLVAKGYS

A0A5A7VIT8 Retrovirus-related Pol polyprotein from transposon TNT 1-948.8e-25077.33Show/hide
Query:  MTSNYSLMNTSSHAKSLPPIYAADGNCMNVPHIGTINTPSLNLPHTYRVPNLTFNLVSIGQLCDLGLTVSFSPNGCQVQDPQTGQPIGTGRKVRRLFELL
        MTS+YSLMNT S  KSLPPIYAADGNCMN+ H+GTINTPSLNLPHTY VPNLTFNLVS+GQLCDLG TVSFS NGCQVQDPQTGQ IGTGRKV RLFELL
Subjt:  MTSNYSLMNTSSHAKSLPPIYAADGNCMNVPHIGTINTPSLNLPHTYRVPNLTFNLVSIGQLCDLGLTVSFSPNGCQVQDPQTGQPIGTGRKVRRLFELL

Query:  SLQVPSPSSISAPVTDSDTNQWHLRLGHASPEKLRHLISVNNLNNVTKFVPFNCLNCKLAKQPVLSFSPSTSICDKPFDLIHSDIWGLAPTITVQGYRYY
        SLQVPSP SISAPVTDSDT QWHLRLGHASPEKLRHLIS+NNLN++TKFVPFNCLNCKLAKQP LSFS STSICDKPFDLIHSDIWG APT TV GYRYY
Subjt:  SLQVPSPSSISAPVTDSDTNQWHLRLGHASPEKLRHLISVNNLNNVTKFVPFNCLNCKLAKQPVLSFSPSTSICDKPFDLIHSDIWGLAPTITVQGYRYY

Query:  VLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIHTQFSCSIKTLCTDNALEYKDSILLSFLSQQGTLVQRSCPYNSQQNGRAERKYRHILDSF-------
        VLFIDDFSRFTWIYFLKHRSELSRTYIEFANMI TQFSC IKTL TDNALEYKDS LLSFLSQQGTLVQRSCP+ SQQNGRAERK+RHILDS        
Subjt:  VLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIHTQFSCSIKTLCTDNALEYKDSILLSFLSQQGTLVQRSCPYNSQQNGRAERKYRHILDSF-------

Query:  --------------------IPSTFFLLLSPFERLYGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARLYCFLGYGTEHKGFRCWDPLSNRLRISRHVT
                            +PS+    +SPFERLYGTPPNYSNLKVFGCACFVLL PHEHTKLEPRARL CFLGYGTEHKGFRCWDPLSNRLRISRHVT
Subjt:  --------------------IPSTFFLLLSPFERLYGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARLYCFLGYGTEHKGFRCWDPLSNRLRISRHVT

Query:  FWEHTMFSHLSSFHSSFSSPQPFFTSTSVELFTLSEPILNTELAQSAPTSANSNQSFVSDDGPEPTLDTPPRCSTR------------------------
        FWEHTMFS LSSFH+SFSSPQ FFT TS++LF LSE     ELAQSAPTSA S+QS +SD  P+P  D PPR STR                        
Subjt:  FWEHTMFSHLSSFHSSFSSPQPFFTSTSVELFTLSEPILNTELAQSAPTSANSNQSFVSDDGPEPTLDTPPRCSTR------------------------

Query:  ------------KAMNDELQALEKTHTWDYVDLPPGKRFIGCKWIYKIKTHSDGTIEHYKARLVAKGYS
                    KAMNDELQALEK HTWDYVDLPPGKR IGCKWIYKIKTHSDGTIE YKARLVAKGYS
Subjt:  ------------KAMNDELQALEKTHTWDYVDLPPGKRFIGCKWIYKIKTHSDGTIEHYKARLVAKGYS

A0A5D3C0D7 Retrovirus-related Pol polyprotein from transposon TNT 1-948.8e-25077.33Show/hide
Query:  MTSNYSLMNTSSHAKSLPPIYAADGNCMNVPHIGTINTPSLNLPHTYRVPNLTFNLVSIGQLCDLGLTVSFSPNGCQVQDPQTGQPIGTGRKVRRLFELL
        MTS+YSLMNT S  KSLPPIYAADGNCMN+ H+GTINTPSLNLPHTY VPNLTFNLVS+GQLCDLG TVSFS NGCQVQDPQTGQ IGTGRKV RLFELL
Subjt:  MTSNYSLMNTSSHAKSLPPIYAADGNCMNVPHIGTINTPSLNLPHTYRVPNLTFNLVSIGQLCDLGLTVSFSPNGCQVQDPQTGQPIGTGRKVRRLFELL

Query:  SLQVPSPSSISAPVTDSDTNQWHLRLGHASPEKLRHLISVNNLNNVTKFVPFNCLNCKLAKQPVLSFSPSTSICDKPFDLIHSDIWGLAPTITVQGYRYY
        SLQVPSP SISAPVTDSDT QWHLRLGHASPEKLRHLIS+NNLN++TKFVPFNCLNCKLAKQP LSFS STSICDKPFDLIHSDIWG APT TV GYRYY
Subjt:  SLQVPSPSSISAPVTDSDTNQWHLRLGHASPEKLRHLISVNNLNNVTKFVPFNCLNCKLAKQPVLSFSPSTSICDKPFDLIHSDIWGLAPTITVQGYRYY

Query:  VLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIHTQFSCSIKTLCTDNALEYKDSILLSFLSQQGTLVQRSCPYNSQQNGRAERKYRHILDSF-------
        VLFIDDFSRFTWIYFLKHRSELSRTYIEFANMI TQFSC IKTL TDNALEYKDS LLSFLSQQGTLVQRSCP+ SQQNGRAERK+RHILDS        
Subjt:  VLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIHTQFSCSIKTLCTDNALEYKDSILLSFLSQQGTLVQRSCPYNSQQNGRAERKYRHILDSF-------

Query:  --------------------IPSTFFLLLSPFERLYGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARLYCFLGYGTEHKGFRCWDPLSNRLRISRHVT
                            +PS+    +SPFERLYGTPPNYSNLKVFGCACFVLL PHEHTKLEPRARL CFLGYGTEHKGFRCWDPLSNRLRISRHVT
Subjt:  --------------------IPSTFFLLLSPFERLYGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARLYCFLGYGTEHKGFRCWDPLSNRLRISRHVT

Query:  FWEHTMFSHLSSFHSSFSSPQPFFTSTSVELFTLSEPILNTELAQSAPTSANSNQSFVSDDGPEPTLDTPPRCSTR------------------------
        FWEHTMFS LSSFH+SFSSPQ FFT TS++LF LSE     ELAQSAPTSA S+QS +SD  P+P  D PPR STR                        
Subjt:  FWEHTMFSHLSSFHSSFSSPQPFFTSTSVELFTLSEPILNTELAQSAPTSANSNQSFVSDDGPEPTLDTPPRCSTR------------------------

Query:  ------------KAMNDELQALEKTHTWDYVDLPPGKRFIGCKWIYKIKTHSDGTIEHYKARLVAKGYS
                    KAMNDELQALEK HTWDYVDLPPGKR IGCKWIYKIKTHSDGTIE YKARLVAKGYS
Subjt:  ------------KAMNDELQALEKTHTWDYVDLPPGKRFIGCKWIYKIKTHSDGTIEHYKARLVAKGYS

A0A5D3D7V8 Retrovirus-related Pol polyprotein from transposon TNT 1-948.8e-25077.33Show/hide
Query:  MTSNYSLMNTSSHAKSLPPIYAADGNCMNVPHIGTINTPSLNLPHTYRVPNLTFNLVSIGQLCDLGLTVSFSPNGCQVQDPQTGQPIGTGRKVRRLFELL
        MTS+YSLMNT S  KSLPPIYAADGNCMN+ H+GTINTPSLNLPHTY VPNLTFNLVS+GQLCDLG TVSFS NGCQVQDPQTGQ IGTGRKV RLFELL
Subjt:  MTSNYSLMNTSSHAKSLPPIYAADGNCMNVPHIGTINTPSLNLPHTYRVPNLTFNLVSIGQLCDLGLTVSFSPNGCQVQDPQTGQPIGTGRKVRRLFELL

Query:  SLQVPSPSSISAPVTDSDTNQWHLRLGHASPEKLRHLISVNNLNNVTKFVPFNCLNCKLAKQPVLSFSPSTSICDKPFDLIHSDIWGLAPTITVQGYRYY
        SLQVPSP SISAPVTDSDT QWHLRLGHASPEKLRHLIS+NNLN++TKFVPFNCLNCKLAKQP LSFS STSICDKPFDLIHSDIWG APT TV GYRYY
Subjt:  SLQVPSPSSISAPVTDSDTNQWHLRLGHASPEKLRHLISVNNLNNVTKFVPFNCLNCKLAKQPVLSFSPSTSICDKPFDLIHSDIWGLAPTITVQGYRYY

Query:  VLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIHTQFSCSIKTLCTDNALEYKDSILLSFLSQQGTLVQRSCPYNSQQNGRAERKYRHILDSF-------
        VLFIDDFSRFTWIYFLKHRSELSRTYIEFANMI TQFSC IKTL TDNALEYKDS LLSFLSQQGTLVQRSCP+ SQQNGRAERK+RHILDS        
Subjt:  VLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIHTQFSCSIKTLCTDNALEYKDSILLSFLSQQGTLVQRSCPYNSQQNGRAERKYRHILDSF-------

Query:  --------------------IPSTFFLLLSPFERLYGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARLYCFLGYGTEHKGFRCWDPLSNRLRISRHVT
                            +PS+    +SPFERLYGTPPNYSNLKVFGCACFVLL PHEHTKLEPRARL CFLGYGTEHKGFRCWDPLSNRLRISRHVT
Subjt:  --------------------IPSTFFLLLSPFERLYGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARLYCFLGYGTEHKGFRCWDPLSNRLRISRHVT

Query:  FWEHTMFSHLSSFHSSFSSPQPFFTSTSVELFTLSEPILNTELAQSAPTSANSNQSFVSDDGPEPTLDTPPRCSTR------------------------
        FWEHTMFS LSSFH+SFSSPQ FFT TS++LF LSE     ELAQSAPTSA S+QS +SD  P+P  D PPR STR                        
Subjt:  FWEHTMFSHLSSFHSSFSSPQPFFTSTSVELFTLSEPILNTELAQSAPTSANSNQSFVSDDGPEPTLDTPPRCSTR------------------------

Query:  ------------KAMNDELQALEKTHTWDYVDLPPGKRFIGCKWIYKIKTHSDGTIEHYKARLVAKGYS
                    KAMNDELQALEK HTWDYVDLPPGKR IGCKWIYKIKTHSDGTIE YKARLVAKGYS
Subjt:  ------------KAMNDELQALEKTHTWDYVDLPPGKRFIGCKWIYKIKTHSDGTIEHYKARLVAKGYS

A0A5D3DT06 Retrovirus-related Pol polyprotein from transposon TNT 1-948.8e-25077.33Show/hide
Query:  MTSNYSLMNTSSHAKSLPPIYAADGNCMNVPHIGTINTPSLNLPHTYRVPNLTFNLVSIGQLCDLGLTVSFSPNGCQVQDPQTGQPIGTGRKVRRLFELL
        MTS+YSLMNT S  KSLPPIYAADGNCMN+ H+GTINTPSLNLPHTY VPNLTFNLVS+GQLCDLG TVSFS NGCQVQDPQTGQ IGTGRKV RLFELL
Subjt:  MTSNYSLMNTSSHAKSLPPIYAADGNCMNVPHIGTINTPSLNLPHTYRVPNLTFNLVSIGQLCDLGLTVSFSPNGCQVQDPQTGQPIGTGRKVRRLFELL

Query:  SLQVPSPSSISAPVTDSDTNQWHLRLGHASPEKLRHLISVNNLNNVTKFVPFNCLNCKLAKQPVLSFSPSTSICDKPFDLIHSDIWGLAPTITVQGYRYY
        SLQVPSP SISAPVTDSDT QWHLRLGHASPEKLRHLIS+NNLN++TKFVPFNCLNCKLAKQP LSFS STSICDKPFDLIHSDIWG APT TV GYRYY
Subjt:  SLQVPSPSSISAPVTDSDTNQWHLRLGHASPEKLRHLISVNNLNNVTKFVPFNCLNCKLAKQPVLSFSPSTSICDKPFDLIHSDIWGLAPTITVQGYRYY

Query:  VLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIHTQFSCSIKTLCTDNALEYKDSILLSFLSQQGTLVQRSCPYNSQQNGRAERKYRHILDSF-------
        VLFIDDFSRFTWIYFLKHRSELSRTYIEFANMI TQFSC IKTL TDNALEYKDS LLSFLSQQGTLVQRSCP+ SQQNGRAERK+RHILDS        
Subjt:  VLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIHTQFSCSIKTLCTDNALEYKDSILLSFLSQQGTLVQRSCPYNSQQNGRAERKYRHILDSF-------

Query:  --------------------IPSTFFLLLSPFERLYGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARLYCFLGYGTEHKGFRCWDPLSNRLRISRHVT
                            +PS+    +SPFERLYGTPPNYSNLKVFGCACFVLL PHEHTKLEPRARL CFLGYGTEHKGFRCWDPLSNRLRISRHVT
Subjt:  --------------------IPSTFFLLLSPFERLYGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARLYCFLGYGTEHKGFRCWDPLSNRLRISRHVT

Query:  FWEHTMFSHLSSFHSSFSSPQPFFTSTSVELFTLSEPILNTELAQSAPTSANSNQSFVSDDGPEPTLDTPPRCSTR------------------------
        FWEHTMFS LSSFH+SFSSPQ FFT TS++LF LSE     ELAQSAPTSA S+QS +SD  P+P  D PPR STR                        
Subjt:  FWEHTMFSHLSSFHSSFSSPQPFFTSTSVELFTLSEPILNTELAQSAPTSANSNQSFVSDDGPEPTLDTPPRCSTR------------------------

Query:  ------------KAMNDELQALEKTHTWDYVDLPPGKRFIGCKWIYKIKTHSDGTIEHYKARLVAKGYS
                    KAMNDELQALEK HTWDYVDLPPGKR IGCKWIYKIKTHSDGTIE YKARLVAKGYS
Subjt:  ------------KAMNDELQALEKTHTWDYVDLPPGKRFIGCKWIYKIKTHSDGTIEHYKARLVAKGYS

SwissProt top hitse value%identityAlignment
P04146 Copia protein7.1e-2324.59Show/hide
Query:  NLVSIGQLCDLGLTVSFSPNGCQVQDPQTGQPIGTGRKVRRLFELLSLQVPSPSSISAPVTDSDTNQWHLRLGHASPEKL-----RHLISVNNLNNVTKF
        NL+S+ +L + G+++ F  +G  +   + G  +     +     +++ Q     SI+A    ++   WH R GH S  KL     +++ S  +L N  + 
Subjt:  NLVSIGQLCDLGLTVSFSPNGCQVQDPQTGQPIGTGRKVRRLFELLSLQVPSPSSISAPVTDSDTNQWHLRLGHASPEKL-----RHLISVNNLNNVTKF

Query:  ---VPFNCLNCKLAKQPVLSFSPSTSICDKPFDLIHSDIWGLAPTITVQGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIHTQFSCSIKTLCT
           +   CLN K A+ P       T I  +P  ++HSD+ G    +T+    Y+V+F+D F+ +   Y +K++S++   + +F       F+  +  L  
Subjt:  ---VPFNCLNCKLAKQPVLSFSPSTSICDKPFDLIHSDIWGLAPTITVQGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIHTQFSCSIKTLCT

Query:  DNALEYKDSILLSFLSQQGTLVQRSCPYNSQQNGRAERKYRHILD-------------SF--------------IPSTFFLLLS--PFERLYGTPPNYSN
        DN  EY  + +  F  ++G     + P+  Q NG +ER  R I +             SF              IPS   +  S  P+E  +   P   +
Subjt:  DNALEYKDSILLSFLSQQGTLVQRSCPYNSQQNGRAERKYRHILD-------------SF--------------IPSTFFLLLS--PFERLYGTPPNYSN

Query:  LKVFGCACFVLLHPHEHTKLEPRARLYCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTM
        L+VFG   +V +  ++  K + ++    F+GY  E  GF+ WD ++ +  ++R V   E  M
Subjt:  LKVFGCACFVLLHPHEHTKLEPRARLYCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTM

P04146 Copia protein3.9e-0533.87Show/hide
Query:  RCSTRKAMNDELQALEKTHTWDYVDLPPGKRFIGCKWIYKIKTHSDGTIEHYKARLVAKGYS
        + S  +A+N EL A +  +TW     P  K  +  +W++ +K +  G    YKARLVA+G++
Subjt:  RCSTRKAMNDELQALEKTHTWDYVDLPPGKRFIGCKWIYKIKTHSDGTIEHYKARLVAKGYS

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.2e-4026.75Show/hide
Query:  ISAPVTDSDTNQWHLRLGHASPEKLRHLISVNNLNNVTKFVPFNCLNCKLAKQPVLSFSPSTSICDKPFDLIHSDIWGLAPTITVQGYRYYVLFIDDFSR
        ++A   +   + WH R+GH S + L+ L   + ++         C  C   KQ  +SF  S+       DL++SD+ G     ++ G +Y+V FIDD SR
Subjt:  ISAPVTDSDTNQWHLRLGHASPEKLRHLISVNNLNNVTKFVPFNCLNCKLAKQPVLSFSPSTSICDKPFDLIHSDIWGLAPTITVQGYRYYVLFIDDFSR

Query:  FTWIYFLKHRSELSRTYIEFANMIHTQFSCSIKTLCTDNALEYKDSILLSFLSQQGTLVQRSCPYNSQQNGRAERKYRHILDSF--------IPSTFF--
          W+Y LK + ++ + + +F  ++  +    +K L +DN  EY       + S  G   +++ P   Q NG AER  R I++          +P +F+  
Subjt:  FTWIYFLKHRSELSRTYIEFANMIHTQFSCSIKTLCTDNALEYKDSILLSFLSQQGTLVQRSCPYNSQQNGRAERKYRHILDSF--------IPSTFF--

Query:  ----------------LLLSPFERLY-GTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARLYCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWE------
                        L     ER++     +YS+LKVFGC  F  +   + TKL+ ++    F+GYG E  G+R WDP+  ++  SR V F E      
Subjt:  ----------------LLLSPFERLY-GTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARLYCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWE------

Query:  --------HTMFSHLSSFHSSFSSPQPFFTST-------------------------SVELFTLSE----PILNTELAQSAPTSANSNQSFVSDDGPEP-
                + +  +  +  S+ ++P    ++T                          VE  T  E    P+  +E  +       S +  +  D  EP 
Subjt:  --------HTMFSHLSSFHSSFSSPQPFFTST-------------------------SVELFTLSE----PILNTELAQSAPTSANSNQSFVSDDGPEP-

Query:  ----TLDTPPRCSTRKAMNDELQALEKTHTWDYVDLPPGKRFIGCKWIYKIKTHSDGTIEHYKARLVAKGY
             L  P +    KAM +E+++L+K  T+  V+LP GKR + CKW++K+K   D  +  YKARLV KG+
Subjt:  ----TLDTPPRCSTRKAMNDELQALEKTHTWDYVDLPPGKRFIGCKWIYKIKTHSDGTIEHYKARLVAKGY

P92520 Uncharacterized mitochondrial protein AtMg008202.2e-1151.79Show/hide
Query:  KAMNDELQALEKTHTWDYVDLPPGKRFIGCKWIYKIKTHSDGTIEHYKARLVAKGY
        +AM +EL AL +  TW  V  P  +  +GCKW++K K HSDGT++  KARLVAKG+
Subjt:  KAMNDELQALEKTHTWDYVDLPPGKRFIGCKWIYKIKTHSDGTIEHYKARLVAKGY

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE19.9e-6528.61Show/hide
Query:  MTSNYSLMNTSSHAKSLPPIYAADGNCMNVPHIG--TINTPS--LNLPHTYRVPNLTFNLVSIGQLCDL-GLTVSFSPNGCQVQDPQTGQPIGTGRKVRR
        +TS+++ ++          +  ADG+ + + H G  +++T S  LNL +   VPN+  NL+S+ +LC+  G++V F P   QV+D  TG P+  G+    
Subjt:  MTSNYSLMNTSSHAKSLPPIYAADGNCMNVPHIG--TINTPS--LNLPHTYRVPNLTFNLVSIGQLCDL-GLTVSFSPNGCQVQDPQTGQPIGTGRKVRR

Query:  LFELLSLQVPSPSSISAPVTDSDTNQWHLRLGHASPEKLRHLI---SVNNLNNVTKFVPFNCLNCKLAKQPVLSFSPSTSICDKPFDLIHSDIWGLAPTI
        L+E         S  ++P + +  + WH RLGH +P  L  +I   S++ LN   KF+  +C +C + K   + FS ST    +P + I+SD+W  +P +
Subjt:  LFELLSLQVPSPSSISAPVTDSDTNQWHLRLGHASPEKLRHLI---SVNNLNNVTKFVPFNCLNCKLAKQPVLSFSPSTSICDKPFDLIHSDIWGLAPTI

Query:  TVQGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIHTQFSCSIKTLCTDNALEYKDSILLSFLSQQGTLVQRSCPYNSQQNGRAERKYRHILD-
        +   YRYYV+F+D F+R+TW+Y LK +S++  T+I F N++  +F   I T  +DN  E+    L  + SQ G     S P+  + NG +ERK+RHI++ 
Subjt:  TVQGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIHTQFSCSIKTLCTDNALEYKDSILLSFLSQQGTLVQRSCPYNSQQNGRAERKYRHILD-

Query:  -------SFIPSTFF-------------------LLLSPFERLYGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARLYCFLGYGTEHKGFRCWDPLSNR
               + IP T++                    L SPF++L+GT PNY  L+VFGCAC+  L P+   KL+ ++R   FLGY      + C    ++R
Subjt:  -------SFIPSTFF-------------------LLLSPFERLYGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARLYCFLGYGTEHKGFRCWDPLSNR

Query:  LRISRHVTFWE----------------------------HTMF------------------------------------SHL-SSFHSSFSS--------
        L ISRHV F E                            HT                                      S+L SSF SSF S        
Subjt:  LRISRHVTFWE----------------------------HTMF------------------------------------SHL-SSFHSSFSS--------

Query:  ---PQPFFTSTSVELFT----------------------LSEPILNTELAQSAPTSANSNQS-----------------FVSDDGPEP------------
           PQP    T  +  T                      LS P  ++  + S  TSA+S+ +                  V+++   P            
Subjt:  ---PQPFFTSTSVELFT----------------------LSEPILNTELAQSAPTSANSNQS-----------------FVSDDGPEP------------

Query:  ---------------TLDTPPRCST--------RKAMNDELQALEKTHTWDYVDLPPGK-RFIGCKWIYKIKTHSDGTIEHYKARLVAKGYS
                         ++ PR +         R AM  E+ A    HTWD V  PP     +GC+WI+  K +SDG++  YKARLVAKGY+
Subjt:  ---------------TLDTPPRCST--------RKAMNDELQALEKTHTWDYVDLPPGK-RFIGCKWIYKIKTHSDGTIEHYKARLVAKGYS

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.9e-6327.73Show/hide
Query:  MTSNYSLMNTSSHAKSLPPIYAADGNCMNVPHIGTINTP----SLNLPHTYRVPNLTFNLVSIGQLCDLG-LTVSFSPNGCQVQDPQTGQPIGTGRKVRR
        +TS+++ ++          +  ADG+ + + H G+ + P    SL+L     VPN+  NL+S+ +LC+   ++V F P   QV+D  TG P+  G+    
Subjt:  MTSNYSLMNTSSHAKSLPPIYAADGNCMNVPHIGTINTP----SLNLPHTYRVPNLTFNLVSIGQLCDLG-LTVSFSPNGCQVQDPQTGQPIGTGRKVRR

Query:  LFELLSLQVPSPSSISAPVTDSDTNQWHLRLGHASPEKLRHLISVNN---LNNVTKFVPFNCLNCKLAKQPVLSFSPSTSICDKPFDLIHSDIWGLAPTI
        L+E       + S  ++P + +  + WH RLGH S   L  +IS ++   LN   K +  +C +C + K   + FS ST    KP + I+SD+W  +P +
Subjt:  LFELLSLQVPSPSSISAPVTDSDTNQWHLRLGHASPEKLRHLISVNN---LNNVTKFVPFNCLNCKLAKQPVLSFSPSTSICDKPFDLIHSDIWGLAPTI

Query:  TVQGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIHTQFSCSIKTLCTDNALEYKDSILLSFLSQQGTLVQRSCPYNSQQNGRAERKYRHILD-
        ++  YRYYV+F+D F+R+TW+Y LK +S++  T+I F +++  +F   I TL +DN  E+   +L  +LSQ G     S P+  + NG +ERK+RHI++ 
Subjt:  TVQGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIHTQFSCSIKTLCTDNALEYKDSILLSFLSQQGTLVQRSCPYNSQQNGRAERKYRHILD-

Query:  --------------------------SFIPSTFFLLLSPFERLYGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARLYCFLGYGTEHKGFRCWDPLSNR
                                  + +P+    L SPF++L+G PPNY  LKVFGCAC+  L P+   KLE +++   F+GY      + C    + R
Subjt:  --------------------------SFIPSTFFLLLSPFERLYGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARLYCFLGYGTEHKGFRCWDPLSNR

Query:  LRISRHVTFWE----------------------------HT--------------MFSHLSSFHSSFSSPQPFFT---------STSVELFTLSE-----
        L  SRHV F E                            HT              +  HL +     SSP P  T         S+S+   + SE     
Subjt:  LRISRHVTFWE----------------------------HT--------------MFSHLSSFHSSFSSPQPFFT---------STSVELFTLSE-----

Query:  --------------------PILNTELAQS-APTSANSNQSFVSDDGPEPTLDTP---------------------------------------------
                            PILN     S +P S N N          P + TP                                             
Subjt:  --------------------PILNTELAQS-APTSANSNQSFVSDDGPEPTLDTP---------------------------------------------

Query:  ------------------------PRCST--------RKAMNDELQALEKTHTWDYV-DLPPGKRFIGCKWIYKIKTHSDGTIEHYKARLVAKGYS
                                PR +         R+AM  E+ A    HTWD V   PP    +GC+WI+  K +SDG++  YKARLVAKGY+
Subjt:  ------------------------PRCST--------RKAMNDELQALEKTHTWDYV-DLPPGKRFIGCKWIYKIKTHSDGTIEHYKARLVAKGYS

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.1e-1869.64Show/hide
Query:  AMNDELQALEKTHTWDYVDLPPGKRFIGCKWIYKIKTHSDGTIEHYKARLVAKGYS
        AM+DE+ A+E THTW+   LPP K+ IGCKW+YKIK +SDGTIE YKARLVAKGY+
Subjt:  AMNDELQALEKTHTWDYVDLPPGKRFIGCKWIYKIKTHSDGTIEHYKARLVAKGYS

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)1.5e-1251.79Show/hide
Query:  KAMNDELQALEKTHTWDYVDLPPGKRFIGCKWIYKIKTHSDGTIEHYKARLVAKGY
        +AM +EL AL +  TW  V  P  +  +GCKW++K K HSDGT++  KARLVAKG+
Subjt:  KAMNDELQALEKTHTWDYVDLPPGKRFIGCKWIYKIKTHSDGTIEHYKARLVAKGY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATCTAATTATTCTCTTATGAACACTTCTAGTCATGCTAAATCTTTACCACCCATTTATGCTGCTGATGGCAATTGTATGAATGTCCCTCACATTGGTACCATTAA
TACCCCTAGTTTAAATCTTCCTCATACTTACCGTGTCCCAAACTTAACCTTTAATCTAGTGTCTATTGGTCAACTGTGTGATCTTGGCTTAACTGTCTCCTTTTCTCCCA
ATGGTTGTCAGGTCCAGGATCCACAGACGGGACAGCCGATTGGGACAGGTCGCAAAGTGAGAAGATTGTTTGAGCTCTTATCACTTCAGGTTCCTTCTCCTTCATCCATC
TCTGCTCCTGTCACTGATTCTGATACAAATCAGTGGCATCTCCGCCTTGGTCATGCTTCTCCTGAAAAACTACGTCATTTAATTTCTGTCAACAATTTAAATAATGTTAC
CAAGTTTGTCCCTTTTAATTGCTTAAATTGTAAACTTGCTAAGCAACCTGTTTTGTCTTTTTCTCCATCAACTTCTATATGTGATAAACCTTTTGACTTAATCCATTCAG
ACATTTGGGGTCTAGCCCCTACTATCACTGTCCAAGGTTATCGTTATTATGTCTTATTTATTGATGATTTCTCTCGTTTTACATGGATCTACTTTCTCAAACACCGCTCC
GAACTATCTCGCACCTATATTGAATTTGCTAACATGATTCACACCCAATTTTCTTGTTCGATTAAAACCCTTTGCACTGATAATGCCTTGGAGTATAAAGACTCCATTCT
TCTATCTTTTCTCTCCCAACAGGGCACTCTTGTTCAGCGCTCCTGCCCCTACAATTCTCAACAAAATGGGCGTGCTGAGCGCAAATATCGTCACATTCTTGACTCATTTA
TACCATCAACCTTCTTCCTTCTTCTCTCACCATTTGAAAGATTATATGGTACTCCTCCCAACTACTCTAACCTTAAAGTCTTTGGTTGTGCGTGCTTTGTTCTCTTACAT
CCTCATGAACACACTAAACTTGAACCACGTGCTCGTCTCTATTGTTTCCTTGGCTATGGCACCGAACATAAAGGTTTTCGTTGTTGGGATCCTCTTTCCAATAGACTTCG
TATATCTCGCCATGTCACATTTTGGGAGCACACTATGTTCTCTCACTTGTCCTCCTTCCATTCCTCCTTCTCTAGTCCTCAACCTTTCTTCACCAGTACCTCTGTTGAAC
TTTTTACTCTCTCTGAACCCATTCTTAATACTGAGCTTGCTCAATCTGCACCTACTTCTGCAAACTCAAACCAATCGTTCGTCTCTGATGATGGTCCTGAACCTACGCTA
GACACCCCTCCTCGTTGTTCTACTCGGAAAGCGATGAATGATGAATTACAGGCTCTTGAAAAGACACACACTTGGGACTATGTTGACTTACCTCCCGGCAAAAGATTCAT
TGGCTGCAAGTGGATCTACAAGATCAAGACTCACTCTGATGGCACTATTGAGCATTATAAAGCTCGTCTTGTTGCAAAAGGATATTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGACATCTAATTATTCTCTTATGAACACTTCTAGTCATGCTAAATCTTTACCACCCATTTATGCTGCTGATGGCAATTGTATGAATGTCCCTCACATTGGTACCATTAA
TACCCCTAGTTTAAATCTTCCTCATACTTACCGTGTCCCAAACTTAACCTTTAATCTAGTGTCTATTGGTCAACTGTGTGATCTTGGCTTAACTGTCTCCTTTTCTCCCA
ATGGTTGTCAGGTCCAGGATCCACAGACGGGACAGCCGATTGGGACAGGTCGCAAAGTGAGAAGATTGTTTGAGCTCTTATCACTTCAGGTTCCTTCTCCTTCATCCATC
TCTGCTCCTGTCACTGATTCTGATACAAATCAGTGGCATCTCCGCCTTGGTCATGCTTCTCCTGAAAAACTACGTCATTTAATTTCTGTCAACAATTTAAATAATGTTAC
CAAGTTTGTCCCTTTTAATTGCTTAAATTGTAAACTTGCTAAGCAACCTGTTTTGTCTTTTTCTCCATCAACTTCTATATGTGATAAACCTTTTGACTTAATCCATTCAG
ACATTTGGGGTCTAGCCCCTACTATCACTGTCCAAGGTTATCGTTATTATGTCTTATTTATTGATGATTTCTCTCGTTTTACATGGATCTACTTTCTCAAACACCGCTCC
GAACTATCTCGCACCTATATTGAATTTGCTAACATGATTCACACCCAATTTTCTTGTTCGATTAAAACCCTTTGCACTGATAATGCCTTGGAGTATAAAGACTCCATTCT
TCTATCTTTTCTCTCCCAACAGGGCACTCTTGTTCAGCGCTCCTGCCCCTACAATTCTCAACAAAATGGGCGTGCTGAGCGCAAATATCGTCACATTCTTGACTCATTTA
TACCATCAACCTTCTTCCTTCTTCTCTCACCATTTGAAAGATTATATGGTACTCCTCCCAACTACTCTAACCTTAAAGTCTTTGGTTGTGCGTGCTTTGTTCTCTTACAT
CCTCATGAACACACTAAACTTGAACCACGTGCTCGTCTCTATTGTTTCCTTGGCTATGGCACCGAACATAAAGGTTTTCGTTGTTGGGATCCTCTTTCCAATAGACTTCG
TATATCTCGCCATGTCACATTTTGGGAGCACACTATGTTCTCTCACTTGTCCTCCTTCCATTCCTCCTTCTCTAGTCCTCAACCTTTCTTCACCAGTACCTCTGTTGAAC
TTTTTACTCTCTCTGAACCCATTCTTAATACTGAGCTTGCTCAATCTGCACCTACTTCTGCAAACTCAAACCAATCGTTCGTCTCTGATGATGGTCCTGAACCTACGCTA
GACACCCCTCCTCGTTGTTCTACTCGGAAAGCGATGAATGATGAATTACAGGCTCTTGAAAAGACACACACTTGGGACTATGTTGACTTACCTCCCGGCAAAAGATTCAT
TGGCTGCAAGTGGATCTACAAGATCAAGACTCACTCTGATGGCACTATTGAGCATTATAAAGCTCGTCTTGTTGCAAAAGGATATTCATAA
Protein sequenceShow/hide protein sequence
MTSNYSLMNTSSHAKSLPPIYAADGNCMNVPHIGTINTPSLNLPHTYRVPNLTFNLVSIGQLCDLGLTVSFSPNGCQVQDPQTGQPIGTGRKVRRLFELLSLQVPSPSSI
SAPVTDSDTNQWHLRLGHASPEKLRHLISVNNLNNVTKFVPFNCLNCKLAKQPVLSFSPSTSICDKPFDLIHSDIWGLAPTITVQGYRYYVLFIDDFSRFTWIYFLKHRS
ELSRTYIEFANMIHTQFSCSIKTLCTDNALEYKDSILLSFLSQQGTLVQRSCPYNSQQNGRAERKYRHILDSFIPSTFFLLLSPFERLYGTPPNYSNLKVFGCACFVLLH
PHEHTKLEPRARLYCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSHLSSFHSSFSSPQPFFTSTSVELFTLSEPILNTELAQSAPTSANSNQSFVSDDGPEPTL
DTPPRCSTRKAMNDELQALEKTHTWDYVDLPPGKRFIGCKWIYKIKTHSDGTIEHYKARLVAKGYS