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Cmc07g0186091 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc07g0186091
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionNucleic acid-binding, OB-fold containing protein
Genome locationCMiso1.1chr07:4086954..4088878
RNA-Seq ExpressionCmc07g0186091
SyntenyCmc07g0186091
Gene Ontology termsNA
InterPro domainsIPR012340 - Nucleic acid-binding, OB-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146043.1 uncharacterized protein At4g28440 [Cucumis sativus]9.6e-7798.05Show/hide
Query:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTT
        MATGKSPTPASQELQQTNAA RPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQ+KPGTT
Subjt:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTT

Query:  IILRNAKIDMFKGSMRLAVDKWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE
        IILRNAKIDMFKGSMRLAVDKWGRIE+ADPEDFVVKEDNNLSLVEYELVNVAEE
Subjt:  IILRNAKIDMFKGSMRLAVDKWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE

XP_008463705.1 PREDICTED: uncharacterized protein At4g28440-like [Cucumis melo]1.5e-7799.35Show/hide
Query:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTT
        MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQ+KPGTT
Subjt:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTT

Query:  IILRNAKIDMFKGSMRLAVDKWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE
        IILRNAKIDMFKGSMRLAVDKWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE
Subjt:  IILRNAKIDMFKGSMRLAVDKWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE

XP_022139613.1 uncharacterized protein At4g28440-like [Momordica charantia]2.5e-6988.96Show/hide
Query:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTT
        MATGKSPTPAS E+QQ+NA ARPGLRKPVFVK+EQLKPGTNGHTL VKVV+SNTVLQKGRSVSQHLRQTRIAECLVGDETGTIL TARNDQVD +KP TT
Subjt:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTT

Query:  IILRNAKIDMFKGSMRLAVDKWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE
        II+RNAKIDMFKGSMRLAVDKWGRIE+ +P +FVVKEDNNLSLVEYELVNVAEE
Subjt:  IILRNAKIDMFKGSMRLAVDKWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE

XP_023535412.1 uncharacterized protein At4g28440-like [Cucurbita pepo subsp. pepo]4.5e-6687.66Show/hide
Query:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTT
        MAT KSPTPAS          R GLRKPVFVK+EQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECL+GDETGTILFTARNDQVDQ+KPGTT
Subjt:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTT

Query:  IILRNAKIDMFKGSMRLAVDKWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE
        IILRNAKIDMFKGSMRLAVDKWGRIE+ +PE+FVVKEDNNLSLVEYELVNVAEE
Subjt:  IILRNAKIDMFKGSMRLAVDKWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE

XP_038899654.1 uncharacterized protein At4g28440-like [Benincasa hispida]2.1e-7697.4Show/hide
Query:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTT
        MATGKSPTPASQELQQ+NAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQ+KPGTT
Subjt:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTT

Query:  IILRNAKIDMFKGSMRLAVDKWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE
        IILRNAKIDMFKGSMRLAVDKWGRIE+A+PEDFVVKEDNNLSLVEYELVNVAEE
Subjt:  IILRNAKIDMFKGSMRLAVDKWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE

TrEMBL top hitse value%identityAlignment
A0A0A0L242 Uncharacterized protein4.6e-7798.05Show/hide
Query:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTT
        MATGKSPTPASQELQQTNAA RPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQ+KPGTT
Subjt:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTT

Query:  IILRNAKIDMFKGSMRLAVDKWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE
        IILRNAKIDMFKGSMRLAVDKWGRIE+ADPEDFVVKEDNNLSLVEYELVNVAEE
Subjt:  IILRNAKIDMFKGSMRLAVDKWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE

A0A1S3CKC4 uncharacterized protein At4g28440-like7.1e-7899.35Show/hide
Query:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTT
        MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQ+KPGTT
Subjt:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTT

Query:  IILRNAKIDMFKGSMRLAVDKWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE
        IILRNAKIDMFKGSMRLAVDKWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE
Subjt:  IILRNAKIDMFKGSMRLAVDKWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE

A0A5D3DWE0 Nucleic acid-binding7.1e-7899.35Show/hide
Query:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTT
        MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQ+KPGTT
Subjt:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTT

Query:  IILRNAKIDMFKGSMRLAVDKWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE
        IILRNAKIDMFKGSMRLAVDKWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE
Subjt:  IILRNAKIDMFKGSMRLAVDKWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE

A0A6J1CG19 uncharacterized protein At4g28440-like1.2e-6988.96Show/hide
Query:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTT
        MATGKSPTPAS E+QQ+NA ARPGLRKPVFVK+EQLKPGTNGHTL VKVV+SNTVLQKGRSVSQHLRQTRIAECLVGDETGTIL TARNDQVD +KP TT
Subjt:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTT

Query:  IILRNAKIDMFKGSMRLAVDKWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE
        II+RNAKIDMFKGSMRLAVDKWGRIE+ +P +FVVKEDNNLSLVEYELVNVAEE
Subjt:  IILRNAKIDMFKGSMRLAVDKWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE

A0A6J1FBC1 uncharacterized protein At4g28440-like2.8e-6687.01Show/hide
Query:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTT
        MAT KSPTPAS          R GLRKPVFVK+EQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECL+GDETGTILFTARNDQVDQ+KPGTT
Subjt:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTT

Query:  IILRNAKIDMFKGSMRLAVDKWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE
        IILRNAKIDMFKGSMRLAVDKWGRIE+ +PE+FVVKEDNNLSL+EYELVNVAEE
Subjt:  IILRNAKIDMFKGSMRLAVDKWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE

SwissProt top hitse value%identityAlignment
O49453 Uncharacterized protein At4g284405.0e-4467.42Show/hide
Query:  RKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGR------SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTTIILRNAKIDMFKGSMRLAV
        RKPVFVK+EQLKPGT GHTL VKV+ +N V+   R      S+S+  + +RI ECL+GDETG ILFTARNDQVD +KPG T+ILRN++IDMFKG+MRL V
Subjt:  RKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGR------SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTTIILRNAKIDMFKGSMRLAV

Query:  DKWGRIEIADPEDFVVKEDNNLSLVEYELVNV
        DKWGRIE      F VKEDNNLSLVEYEL+NV
Subjt:  DKWGRIEIADPEDFVVKEDNNLSLVEYELVNV

Arabidopsis top hitse value%identityAlignment
AT1G10590.1 Nucleic acid-binding, OB-fold-like protein1.2e-4565.44Show/hide
Query:  AAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQK--GRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTTIILRNAKIDMFKGSMR
        A A   LRKPVF K+ +L+PGTNGH+L VKVV++  V+Q+  GR +    RQ RIAECLVGDETG I+FTARNDQVD +K G+ + LRNAKIDM+KGSMR
Subjt:  AAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQK--GRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTTIILRNAKIDMFKGSMR

Query:  LAVDKWGRIEIA-DPEDFVVKEDNNLSLVEYELVNV
        LAVD+WGR+E+A +P D  VK+DNNLSL+EYELV+V
Subjt:  LAVDKWGRIEIA-DPEDFVVKEDNNLSLVEYELVNV

AT1G10590.2 Nucleic acid-binding, OB-fold-like protein1.2e-4565.44Show/hide
Query:  AAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQK--GRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTTIILRNAKIDMFKGSMR
        A A   LRKPVF K+ +L+PGTNGH+L VKVV++  V+Q+  GR +    RQ RIAECLVGDETG I+FTARNDQVD +K G+ + LRNAKIDM+KGSMR
Subjt:  AAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQK--GRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTTIILRNAKIDMFKGSMR

Query:  LAVDKWGRIEIA-DPEDFVVKEDNNLSLVEYELVNV
        LAVD+WGR+E+A +P D  VK+DNNLSL+EYELV+V
Subjt:  LAVDKWGRIEIA-DPEDFVVKEDNNLSLVEYELVNV

AT1G10590.3 Nucleic acid-binding, OB-fold-like protein1.2e-4565.44Show/hide
Query:  AAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQK--GRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTTIILRNAKIDMFKGSMR
        A A   LRKPVF K+ +L+PGTNGH+L VKVV++  V+Q+  GR +    RQ RIAECLVGDETG I+FTARNDQVD +K G+ + LRNAKIDM+KGSMR
Subjt:  AAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQK--GRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTTIILRNAKIDMFKGSMR

Query:  LAVDKWGRIEIA-DPEDFVVKEDNNLSLVEYELVNV
        LAVD+WGR+E+A +P D  VK+DNNLSL+EYELV+V
Subjt:  LAVDKWGRIEIA-DPEDFVVKEDNNLSLVEYELVNV

AT1G23750.1 Nucleic acid-binding, OB-fold-like protein2.0e-4864.93Show/hide
Query:  AARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTTIILRNAKIDMFKGSMRLAV
        + + GL+KP F K++QL+PGT+GH + VK+VS+  VLQKGR+     RQ RI+EC+VGDETG I+FTARNDQVD +K G+T+ LRNAKIDM+KGSMRLAV
Subjt:  AARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTTIILRNAKIDMFKGSMRLAV

Query:  DKWGRIEIADPEDFVVKEDNNLSLVEYELVNVAE
        DKWGR+E+ +P  F VKED N+SL+EYELVNV E
Subjt:  DKWGRIEIADPEDFVVKEDNNLSLVEYELVNVAE

AT2G33845.1 Nucleic acid-binding, OB-fold-like protein4.8e-5066.03Show/hide
Query:  GKSPTPASQELQ----QTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQK-GRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPG
        G++P P S   +    Q         +KPVFVK++QLKPGT+GHTL VKVV  N+V QK G + S HLR  RI+ECLVGDET  ILFTARNDQV+ +KPG
Subjt:  GKSPTPASQELQ----QTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQK-GRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPG

Query:  TTIILRNAKIDMFKGSMRLAVDKWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE
         T+ LRNAKIDMFKGSMRLAVDKWGRIE  +P D  VKEDNNLSLVEYELVNV EE
Subjt:  TTIILRNAKIDMFKGSMRLAVDKWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACAGGGAAATCACCTACGCCGGCATCGCAGGAGCTGCAGCAGACCAATGCAGCGGCTAGACCTGGCCTGAGGAAGCCAGTCTTTGTTAAGATCGAACAGCTCAA
ACCCGGTACCAATGGTCACACACTCATCGTCAAGGTTGTTAGCTCCAATACCGTGTTGCAGAAGGGTCGATCCGTGTCTCAGCACCTTCGGCAGACGCGGATCGCTGAGT
GCCTTGTTGGCGACGAAACTGGAACCATTTTGTTCACTGCGCGTAATGATCAAGTTGATCAATTAAAACCTGGGACAACTATCATTCTTCGAAATGCAAAGATCGACATG
TTCAAAGGGTCTATGAGGCTAGCAGTTGATAAATGGGGCCGCATTGAGATTGCCGATCCTGAAGATTTTGTCGTCAAGGAAGACAATAATCTATCTTTAGTCGAGTATGA
ACTTGTGAATGTTGCAGAGGAATGA
mRNA sequenceShow/hide mRNA sequence
GAAAAATGTCACAAAAAAAAAAAAGCCAAAGAGGAAGAAAGAACAAAGAATGAAGTGAAGAGATGCTATTGCTATATATATAAACGCCACTCTCCTAAATTCTCACAATT
CACAGCGCCACACACACAAACCTAAATCCATCGAGAAAGAAGACAACTTTCGGTCCATTTTCACGGATTCGGATTCAGCTTTCGCATCAATGGCGACAGGGAAATCACCT
ACGCCGGCATCGCAGGAGCTGCAGCAGACCAATGCAGCGGCTAGACCTGGCCTGAGGAAGCCAGTCTTTGTTAAGATCGAACAGCTCAAACCCGGTACCAATGGTCACAC
ACTCATCGTCAAGGTTGTTAGCTCCAATACCGTGTTGCAGAAGGGTCGATCCGTGTCTCAGCACCTTCGGCAGACGCGGATCGCTGAGTGCCTTGTTGGCGACGAAACTG
GAACCATTTTGTTCACTGCGCGTAATGATCAAGTTGATCAATTAAAACCTGGGACAACTATCATTCTTCGAAATGCAAAGATCGACATGTTCAAAGGGTCTATGAGGCTA
GCAGTTGATAAATGGGGCCGCATTGAGATTGCCGATCCTGAAGATTTTGTCGTCAAGGAAGACAATAATCTATCTTTAGTCGAGTATGAACTTGTGAATGTTGCAGAGGA
ATGAGAAGGTACTACTGAATGCCAACTTTAAGACAATGGGTTGAGATGGCTGGTCAGTGAGTTTCCTGGTAATCTGCAGATGTGAATATATAACAACGCTATATTATAAT
TTTGTGTGGGTGAAGTATTTAAGCGAACAATCCCTTGATTTCTTCTAAAGCTCTATTCCGTCGGTTTGACTTACACAAAGCCATGTTTTGTCGGGTAAAGGTATAAATAG
GTACTAGTTTGGTACTTGTTATAACTCTGGAAATGTAATAGAGCGTTAACGACGGCAAAGAATGCTTTTGGTATGCCTTTGATATCATATCTAACATGCAAAGTTTTCAA
TTTGCTG
Protein sequenceShow/hide protein sequence
MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTTIILRNAKIDM
FKGSMRLAVDKWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE