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Cmc07g0186131 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc07g0186131
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrotransposon protein
Genome locationCMiso1.1chr07:4106044..4107802
RNA-Seq ExpressionCmc07g0186131
SyntenyCmc07g0186131
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0016787 - hydrolase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33754.1 retrotransposon protein [Cucumis melo subsp. melo]3.6e-5272.79Show/hide
Query:  ERVFGVLKGRWAILRGTLYYPLQVQCRTILACALLPNLINSEMTYCEDVDDVDEGDSTYATTTASEDIHYIETTNEWSQWRDELAESMFTDWHMSTSNRA
        ER FGVLKGRW ILRG  YYPLQVQCRTILAC LL NLIN EMTYC DV+D DEGDSTYATTTASEDI YIETTNEWSQWRD+LA SMFTDW     +  
Subjt:  ERVFGVLKGRWAILRGTLYYPLQVQCRTILACALLPNLINSEMTYCEDVDDVDEGDSTYATTTASEDIHYIETTNEWSQWRDELAESMFTDWHMSTSNRA

Query:  PRHVWTKEEEGTLVECLIDLVSMGGWKSDNGTFRPGYLAQLVRMMAK
                       C ++LVSMGGWKSDNGTFRPGYLAQLVRMMA+
Subjt:  PRHVWTKEEEGTLVECLIDLVSMGGWKSDNGTFRPGYLAQLVRMMAK

ADN34114.1 retrotransposon protein [Cucumis melo subsp. melo]8.8e-5169.86Show/hide
Query:  ERVFGVLKGRWAILRGTLYYPLQVQCRTILACALLPNLINSEMTYCEDVDDVDEGDSTYATTTASEDIHYIETTNEWSQWRDELAESMFTDWHMSTSNRA
        ER FGVLKGRWAILRG  YYP++VQCRTILAC LL NLIN EMT  +  D++DE DST+A TTA++DIHYIET+NEWSQWRD LAE +     M++S+R 
Subjt:  ERVFGVLKGRWAILRGTLYYPLQVQCRTILACALLPNLINSEMTYCEDVDDVDEGDSTYATTTASEDIHYIETTNEWSQWRDELAESMFTDWHMSTSNRA

Query:  PRHVWTKEEEGTLVECLIDLVSMGGWKSDNGTFRPGYLAQLVRMMA
        P+H WTKEEE  LVECL++LV+ GGW+SDNGTFRPGYL QL RMMA
Subjt:  PRHVWTKEEEGTLVECLIDLVSMGGWKSDNGTFRPGYLAQLVRMMA

KAA0036474.1 retrotransposon protein [Cucumis melo var. makuwa]7.7e-5574.83Show/hide
Query:  ERVFGVLKGRWAILRGTLYYPLQVQCRTILACALLPNLINSEMTYCEDVDDVDEGDSTYATTTASEDIHYIETTNEWSQWRDELAESMFTDWHMSTSNRA
        ER FGVLKGRWAILRG                        SEMTYC+DV+D DEGDSTYATTTASEDI YIETTNEWSQWRD+LA SMF DWHMSTSNRA
Subjt:  ERVFGVLKGRWAILRGTLYYPLQVQCRTILACALLPNLINSEMTYCEDVDDVDEGDSTYATTTASEDIHYIETTNEWSQWRDELAESMFTDWHMSTSNRA

Query:  PRHVWTKEEEGTLVECLIDLVSMGGWKSDNGTFRPGYLAQLVRMMAK
        PRHVWT+EEEGTLVECL++LVSMGGWKSDNGTFR GYLAQLVRMMA+
Subjt:  PRHVWTKEEEGTLVECLIDLVSMGGWKSDNGTFRPGYLAQLVRMMAK

KAA0036924.1 retrotransposon protein [Cucumis melo var. makuwa]9.8e-5090.48Show/hide
Query:  MTYCEDVDDVDEGDSTYATTTASEDIHYIETTNEWSQWRDELAESMFTDWHMSTSNRAPRHVWTKEEEGTLVECLIDLVSMGGWKSDNGTFRPGYLAQLV
        MTYC+DV+D DEGDSTYATTTASEDI YIETTNEWSQWRD LA SMFTDWHMSTSNRAPRHVWT+EEEGTLVECL++LVSMGGWKSDNGTFRPGYLAQLV
Subjt:  MTYCEDVDDVDEGDSTYATTTASEDIHYIETTNEWSQWRDELAESMFTDWHMSTSNRAPRHVWTKEEEGTLVECLIDLVSMGGWKSDNGTFRPGYLAQLV

Query:  RMMAK
        RMMA+
Subjt:  RMMAK

KAA0066806.1 retrotransposon protein [Cucumis melo var. makuwa]2.2e-4993.4Show/hide
Query:  KCANKCKAVLQHERVFGVLKGRWAILRGTLYYPLQVQCRTILACALLPNLINSEMTYCEDVDDVDEGDSTYATTTASEDIHYIETTNEWSQWRDELAESM
        KC NKCKAVLQHERVFGVLKGRWAILRG LYYPLQVQ RTILACALL NLINSEMTYCEDVDDVDEGDSTYATTTASEDIHYIETTNEWSQWRDEL ESM
Subjt:  KCANKCKAVLQHERVFGVLKGRWAILRGTLYYPLQVQCRTILACALLPNLINSEMTYCEDVDDVDEGDSTYATTTASEDIHYIETTNEWSQWRDELAESM

Query:  FTDWHM
        FTDW +
Subjt:  FTDWHM

TrEMBL top hitse value%identityAlignment
A0A5A7SYW1 Retrotransposon protein3.7e-5574.83Show/hide
Query:  ERVFGVLKGRWAILRGTLYYPLQVQCRTILACALLPNLINSEMTYCEDVDDVDEGDSTYATTTASEDIHYIETTNEWSQWRDELAESMFTDWHMSTSNRA
        ER FGVLKGRWAILRG                        SEMTYC+DV+D DEGDSTYATTTASEDI YIETTNEWSQWRD+LA SMF DWHMSTSNRA
Subjt:  ERVFGVLKGRWAILRGTLYYPLQVQCRTILACALLPNLINSEMTYCEDVDDVDEGDSTYATTTASEDIHYIETTNEWSQWRDELAESMFTDWHMSTSNRA

Query:  PRHVWTKEEEGTLVECLIDLVSMGGWKSDNGTFRPGYLAQLVRMMAK
        PRHVWT+EEEGTLVECL++LVSMGGWKSDNGTFR GYLAQLVRMMA+
Subjt:  PRHVWTKEEEGTLVECLIDLVSMGGWKSDNGTFRPGYLAQLVRMMAK

A0A5A7T091 Retrotransposon protein4.7e-5090.48Show/hide
Query:  MTYCEDVDDVDEGDSTYATTTASEDIHYIETTNEWSQWRDELAESMFTDWHMSTSNRAPRHVWTKEEEGTLVECLIDLVSMGGWKSDNGTFRPGYLAQLV
        MTYC+DV+D DEGDSTYATTTASEDI YIETTNEWSQWRD LA SMFTDWHMSTSNRAPRHVWT+EEEGTLVECL++LVSMGGWKSDNGTFRPGYLAQLV
Subjt:  MTYCEDVDDVDEGDSTYATTTASEDIHYIETTNEWSQWRDELAESMFTDWHMSTSNRAPRHVWTKEEEGTLVECLIDLVSMGGWKSDNGTFRPGYLAQLV

Query:  RMMAK
        RMMA+
Subjt:  RMMAK

A0A5A7VK86 Retrotransposon protein1.1e-4993.4Show/hide
Query:  KCANKCKAVLQHERVFGVLKGRWAILRGTLYYPLQVQCRTILACALLPNLINSEMTYCEDVDDVDEGDSTYATTTASEDIHYIETTNEWSQWRDELAESM
        KC NKCKAVLQHERVFGVLKGRWAILRG LYYPLQVQ RTILACALL NLINSEMTYCEDVDDVDEGDSTYATTTASEDIHYIETTNEWSQWRDEL ESM
Subjt:  KCANKCKAVLQHERVFGVLKGRWAILRGTLYYPLQVQCRTILACALLPNLINSEMTYCEDVDDVDEGDSTYATTTASEDIHYIETTNEWSQWRDELAESM

Query:  FTDWHM
        FTDW +
Subjt:  FTDWHM

E5GBB2 Retrotransposon protein1.7e-5272.79Show/hide
Query:  ERVFGVLKGRWAILRGTLYYPLQVQCRTILACALLPNLINSEMTYCEDVDDVDEGDSTYATTTASEDIHYIETTNEWSQWRDELAESMFTDWHMSTSNRA
        ER FGVLKGRW ILRG  YYPLQVQCRTILAC LL NLIN EMTYC DV+D DEGDSTYATTTASEDI YIETTNEWSQWRD+LA SMFTDW     +  
Subjt:  ERVFGVLKGRWAILRGTLYYPLQVQCRTILACALLPNLINSEMTYCEDVDDVDEGDSTYATTTASEDIHYIETTNEWSQWRDELAESMFTDWHMSTSNRA

Query:  PRHVWTKEEEGTLVECLIDLVSMGGWKSDNGTFRPGYLAQLVRMMAK
                       C ++LVSMGGWKSDNGTFRPGYLAQLVRMMA+
Subjt:  PRHVWTKEEEGTLVECLIDLVSMGGWKSDNGTFRPGYLAQLVRMMAK

E5GCB5 Retrotransposon protein4.3e-5169.86Show/hide
Query:  ERVFGVLKGRWAILRGTLYYPLQVQCRTILACALLPNLINSEMTYCEDVDDVDEGDSTYATTTASEDIHYIETTNEWSQWRDELAESMFTDWHMSTSNRA
        ER FGVLKGRWAILRG  YYP++VQCRTILAC LL NLIN EMT  +  D++DE DST+A TTA++DIHYIET+NEWSQWRD LAE +     M++S+R 
Subjt:  ERVFGVLKGRWAILRGTLYYPLQVQCRTILACALLPNLINSEMTYCEDVDDVDEGDSTYATTTASEDIHYIETTNEWSQWRDELAESMFTDWHMSTSNRA

Query:  PRHVWTKEEEGTLVECLIDLVSMGGWKSDNGTFRPGYLAQLVRMMA
        P+H WTKEEE  LVECL++LV+ GGW+SDNGTFRPGYL QL RMMA
Subjt:  PRHVWTKEEEGTLVECLIDLVSMGGWKSDNGTFRPGYLAQLVRMMA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGGATATCCAAACGCGGAGGGGTTTCTCGCCCCGTACAGAGGCCAGCGGTACCATTTGCAAGAGTGGCGTGGTGCGCAAATGCGCCAACAAATGCAAAGCAGTACT
TCAACATGAGCGCGTGTTCGGTGTTCTTAAGGGTCGTTGGGCCATTCTTCGTGGGACGTTGTACTATCCCCTGCAAGTTCAGTGTCGCACCATACTAGCATGTGCCTTGC
TTCCCAATTTGATCAACAGCGAAATGACATATTGCGAGGACGTTGATGACGTGGACGAGGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCACTACATT
GAGACAACAAACGAGTGGTCTCAGTGGCGCGACGAACTAGCCGAATCGATGTTCACCGATTGGCATATGTCAACCTCAAATCGTGCCCCGAGACATGTCTGGACGAAGGA
GGAGGAGGGCACTCTTGTGGAATGTTTAATTGATTTGGTGTCAATGGGAGGATGGAAATCAGATAATGGTACGTTCCGCCCAGGTTACCTTGCGCAGTTGGTACGCATGA
TGGCGAAAAACTACTTGAATGTCAGGTCCGAGCAACAACTGTAA
mRNA sequenceShow/hide mRNA sequence
GCTTCCTACTTACCTATTTAAAGGTCTTAAACGAATGATTTAATAACTGGATATTATTATCTGTGCGATGCGGGATATCCAAACGCGGAGGGGTTTCTCGCCCCGTACAG
AGGCCAGCGGTACCATTTGCAAGAGTGGCGTGGTGCGCAAATGCGCCAACAAATGCAAAGCAGTACTTCAACATGAGCGCGTGTTCGGTGTTCTTAAGGGTCGTTGGGCC
ATTCTTCGTGGGACGTTGTACTATCCCCTGCAAGTTCAGTGTCGCACCATACTAGCATGTGCCTTGCTTCCCAATTTGATCAACAGCGAAATGACATATTGCGAGGACGT
TGATGACGTGGACGAGGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCACTACATTGAGACAACAAACGAGTGGTCTCAGTGGCGCGACGAACTAGCCG
AATCGATGTTCACCGATTGGCATATGTCAACCTCAAATCGTGCCCCGAGACATGTCTGGACGAAGGAGGAGGAGGGCACTCTTGTGGAATGTTTAATTGATTTGGTGTCA
ATGGGAGGATGGAAATCAGATAATGGTACGTTCCGCCCAGGTTACCTTGCGCAGTTGGTACGCATGATGGCGAAAAACTACTTGAATGTCAGGTCCGAGCAACAACTGTA
ATTGATTGTAGAATTAAGACACTGAAGCGAACATTCCAGGCCATTGCCGAAATGCGGAGGCCAGCGTGAAGTGGCTTTGGGTGGAACGATGAAGAGAAATGTATCATTGC
GGAGAAGGAATTATTTGATAATTGGGTTAGGTCGCATCCTGCAGCGAAGAGACTCCTGAACACACCATTCCCATATTACGAGGAACTTACATATGTCTTCGGTCGCGATA
GAGCGATCGATCGGTTCGCCGAGACATTCGTCGACGTTGGGTCTAATGAGCCTAGTGGCAGATATGACAGATTTGATATGGGGGATGGAAACGAGGAGTTCCCGCCCATG
TACAGCCAGGGGATTGACCTCTCGTAGGACGATGTACGTGCATCTCGACCTTCTCGCACTTCAGAGGGTAGGACCGGATCCAGTGGATCCAAGAGGAAGAGGGGAAGTCA
GCGAGACTTCGATGTTGAAGCGATACATCTGGCACTCGACCAAACAAACGAGTAACTCAGGCAGACTGCGGAGTGGCCTGCACGCGCCCTTGCAAATGACAACCATGTGC
GCACGGAATTCTTCCGCATATTGCATGAGATGCCAGAACTTATGAGTTTGGATAGGGCGTTATTGCAAAGGCATCTTTTGTCTCGCATGGACGACCTTCGGGGTTTCGTA
CTCATGCCTGAGGATGAGAGGGAGGGATTTTGTAGAGTCCTCCTACGAGACATTACGAGATAGTTTATGTTTCTACGGACCTAGGTTGCTTATTATTTCCTCATCTTTTT
TTCTGTATGATGTT
Protein sequenceShow/hide protein sequence
MRDIQTRRGFSPRTEASGTICKSGVVRKCANKCKAVLQHERVFGVLKGRWAILRGTLYYPLQVQCRTILACALLPNLINSEMTYCEDVDDVDEGDSTYATTTASEDIHYI
ETTNEWSQWRDELAESMFTDWHMSTSNRAPRHVWTKEEEGTLVECLIDLVSMGGWKSDNGTFRPGYLAQLVRMMAKNYLNVRSEQQL