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Cmc07g0186231 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc07g0186231
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrotransposon protein
Genome locationCMiso1.1chr07:4189569..4192361
RNA-Seq ExpressionCmc07g0186231
SyntenyCmc07g0186231
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058870.1 retrotransposon protein [Cucumis melo var. makuwa]1.0e-1576.79Show/hide
Query:  MTTSSRAPKHVWTKEED-TLVEYLVELVSIGTWKSNNGTFRPGYLAQLVCMMGEKL
        M+TS+RAP+HVWTKEE+ TLVE L+EL+S+G WK +NGTFRPGYLAQLVCMM EKL
Subjt:  MTTSSRAPKHVWTKEED-TLVEYLVELVSIGTWKSNNGTFRPGYLAQLVCMMGEKL

KAA0059630.1 retrotransposon protein [Cucumis melo var. makuwa]1.3e-1578.57Show/hide
Query:  MTTSSRAPKHVWTKEED-TLVEYLVELVSIGTWKSNNGTFRPGYLAQLVCMMGEKL
        M+TS+RAP+HVWTKEE+ TLVE+L+ELVS+G WKS+NGTFRPGYLAQLV MM EKL
Subjt:  MTTSSRAPKHVWTKEED-TLVEYLVELVSIGTWKSNNGTFRPGYLAQLVCMMGEKL

KAA0063059.1 retrotransposon protein [Cucumis melo var. makuwa]7.7e-1678.57Show/hide
Query:  MTTSSRAPKHVWTKEED-TLVEYLVELVSIGTWKSNNGTFRPGYLAQLVCMMGEKL
        M+TS+RAP+HVWTKEE+ TLVE L+ELVS+G WKS+ GTFRPGYLAQLVCMM EKL
Subjt:  MTTSSRAPKHVWTKEED-TLVEYLVELVSIGTWKSNNGTFRPGYLAQLVCMMGEKL

KAA0066807.1 retrotransposon protein [Cucumis melo var. makuwa]5.9e-1673.77Show/hide
Query:  MTTSSRAPKHVWTKEED-TLVEYLVELVSIGTWKSNNGTFRPGYLAQLVCMMGEKLLDVVS
        M+TS+RAP+HVWTKEE+ TLVE L++LVS+G WKS+NGTFRPGYLAQLV MM EKLL+  S
Subjt:  MTTSSRAPKHVWTKEED-TLVEYLVELVSIGTWKSNNGTFRPGYLAQLVCMMGEKLLDVVS

KAA0066818.1 retrotransposon protein [Cucumis melo var. makuwa]8.8e-2898.44Show/hide
Query:  MTTSSRAPKHVWTKEEDTLVEYLVELVSIGTWKSNNGTFRPGYLAQLVCMMGEKLLDVVSEQPL
        MTTSSRAPKHVWTKEEDTLVEYLVELVSIG WKSNNGTFRPGYLAQLVCMMGEKLLDVVSEQPL
Subjt:  MTTSSRAPKHVWTKEEDTLVEYLVELVSIGTWKSNNGTFRPGYLAQLVCMMGEKLLDVVSEQPL

TrEMBL top hitse value%identityAlignment
A0A5A7UWW9 Retrotransposon protein6.4e-1678.57Show/hide
Query:  MTTSSRAPKHVWTKEED-TLVEYLVELVSIGTWKSNNGTFRPGYLAQLVCMMGEKL
        M+TS+RAP+HVWTKEE+ TLVE+L+ELVS+G WKS+NGTFRPGYLAQLV MM EKL
Subjt:  MTTSSRAPKHVWTKEED-TLVEYLVELVSIGTWKSNNGTFRPGYLAQLVCMMGEKL

A0A5A7VBS5 Retrotransposon protein3.7e-1678.57Show/hide
Query:  MTTSSRAPKHVWTKEED-TLVEYLVELVSIGTWKSNNGTFRPGYLAQLVCMMGEKL
        M+TS+RAP+HVWTKEE+ TLVE L+ELVS+G WKS+ GTFRPGYLAQLVCMM EKL
Subjt:  MTTSSRAPKHVWTKEED-TLVEYLVELVSIGTWKSNNGTFRPGYLAQLVCMMGEKL

A0A5A7VGC2 Retrotransposon protein4.3e-2898.44Show/hide
Query:  MTTSSRAPKHVWTKEEDTLVEYLVELVSIGTWKSNNGTFRPGYLAQLVCMMGEKLLDVVSEQPL
        MTTSSRAPKHVWTKEEDTLVEYLVELVSIG WKSNNGTFRPGYLAQLVCMMGEKLLDVVSEQPL
Subjt:  MTTSSRAPKHVWTKEEDTLVEYLVELVSIGTWKSNNGTFRPGYLAQLVCMMGEKLLDVVSEQPL

A0A5A7VI45 Retrotransposon protein2.9e-1673.77Show/hide
Query:  MTTSSRAPKHVWTKEED-TLVEYLVELVSIGTWKSNNGTFRPGYLAQLVCMMGEKLLDVVS
        M+TS+RAP+HVWTKEE+ TLVE L++LVS+G WKS+NGTFRPGYLAQLV MM EKLL+  S
Subjt:  MTTSSRAPKHVWTKEED-TLVEYLVELVSIGTWKSNNGTFRPGYLAQLVCMMGEKLLDVVS

A0A5D3DJA6 Retrotransposon protein4.9e-1676.79Show/hide
Query:  MTTSSRAPKHVWTKEED-TLVEYLVELVSIGTWKSNNGTFRPGYLAQLVCMMGEKL
        M+TS+RAP+HVWTKEE+ TLVE L+EL+S+G WK +NGTFRPGYLAQLVCMM EKL
Subjt:  MTTSSRAPKHVWTKEED-TLVEYLVELVSIGTWKSNNGTFRPGYLAQLVCMMGEKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGCGAACATCCTACCTTGTAAGAGTATGACAACCTCATCCCGTGCCCCCAAACATGTATGGACGAAAGAGGAGGACACTCTAGTCGAGTATTTAGTGGAGTTGGT
ATCCATCGGTACATGGAAGTCCAACAATGGTACGTTTCGACCAGGTTACCTGGCCCAACTTGTCTGCATGATGGGTGAAAAGTTGCTGGATGTTGTGTCCGAGCAACCAC
TGTAA
mRNA sequenceShow/hide mRNA sequence
TTTAAAATACTTTTCCTATTTTCGATGTTTGTCGATTCGTAACTTCTTTACTTTTTTATGTAGAATGTCCGCGAACATCCTACCTTGTAAGAGTATGACAACCTCATCCC
GTGCCCCCAAACATGTATGGACGAAAGAGGAGGACACTCTAGTCGAGTATTTAGTGGAGTTGGTATCCATCGGTACATGGAAGTCCAACAATGGTACGTTTCGACCAGGT
TACCTGGCCCAACTTGTCTGCATGATGGGTGAAAAGTTGCTGGATGTTGTGTCCGAGCAACCACTGTAA
Protein sequenceShow/hide protein sequence
MSANILPCKSMTTSSRAPKHVWTKEEDTLVEYLVELVSIGTWKSNNGTFRPGYLAQLVCMMGEKLLDVVSEQPL