CuGenDBv2

Gene ID	Cmc07g0186531
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Cytochrome c biogenesis B
Genome location	CMiso1.1chr07:4430653..4431258
RNA-Seq Expression	Cmc07g0186531
Synteny	Cmc07g0186531
Gene Ontology terms	GO:0015886 - heme transport (biological process) GO:0017004 - cytochrome complex assembly (biological process) GO:0005739 - mitochondrion (cellular component) GO:0016020 - membrane (cellular component) GO:0015232 - heme transporter activity (molecular function)
InterPro domains	IPR003544 - Cytochrome c-type biogenesis protein CcmB

Homology

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GenBank top hits

e value

%identity

Alignment

AEN56106.1 cytochrome c biogenesis B [Cucumis melo subsp. melo]

7.6e-82

92.22

Show/hide

Query:  MRRLFLSLYHKQIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHWVIQI
        MRRLFLSLYHK+IFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGH VIQI
Subjt:  MRRLFLSLYHKQIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHWVIQI

Query:  SCLFCGFPMFKLLYQFGRSRMDRVNILLGSLVLTLQCDIHSHLALGITSSRGWNSSQNPTTSLLHCP
        SCLFCGFPMFKL YQFGRS MDR+NILLGSLVLTL C IHS  ALGITSSRGWNSSQNPTTS    P
Subjt:  SCLFCGFPMFKLLYQFGRSRMDRVNILLGSLVLTLQCDIHSHLALGITSSRGWNSSQNPTTSLLHCP

QXE45588.1 cytochrome c biogenesis B [Prosopis glandulosa]

7.1e-80

89.82

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Query:  MRRLFLSLYHKQIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHWVIQI
        MRRLFL LYHKQIFPSTPITSFSPFLSYIVVTPL+LGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGH VIQI
Subjt:  MRRLFLSLYHKQIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHWVIQI

Query:  SCLFCGFPMFKLLYQFGRSRMDRVNILLGSLVLTLQCDIHSHLALGITSSRGWNSSQNPTTSLLHCP
        SC+FCGFPM +L YQFGRS MDR+NILLGSLVLTL C IHS LALGITSS GWNSSQNPTTS    P
Subjt:  SCLFCGFPMFKLLYQFGRSRMDRVNILLGSLVLTLQCDIHSHLALGITSSRGWNSSQNPTTSLLHCP

YP_004849329.1 cytochrome c biogenesis B [Cucumis sativus]

5.8e-82

91.02

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Query:  MRRLFLSLYHKQIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHWVIQI
        MRRLFL LYHK+IFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQL+GHWVIQI
Subjt:  MRRLFLSLYHKQIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHWVIQI

Query:  SCLFCGFPMFKLLYQFGRSRMDRVNILLGSLVLTLQCDIHSHLALGITSSRGWNSSQNPTTSLLHCP
        SCLFCGFPM KL YQFGRS MDR+NILLGSLVLTL C IHS  ALGITSSRGWNSSQNPTTS    P
Subjt:  SCLFCGFPMFKLLYQFGRSRMDRVNILLGSLVLTLQCDIHSHLALGITSSRGWNSSQNPTTSLLHCP

YP_009913630.1 cytochrome c biogenesis B [Luffa acutangula]

8.4e-81

91.02

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Query:  MRRLFLSLYHKQIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHWVIQI
        MRRLFLSLYHK+IFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGH VIQI
Subjt:  MRRLFLSLYHKQIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHWVIQI

Query:  SCLFCGFPMFKLLYQFGRSRMDRVNILLGSLVLTLQCDIHSHLALGITSSRGWNSSQNPTTSLLHCP
        SC+FCGFPM KL YQFGRS MDR+NILLGSLVLTL C IHS  ALGITSSRGWNSSQNPTTS    P
Subjt:  SCLFCGFPMFKLLYQFGRSRMDRVNILLGSLVLTLQCDIHSHLALGITSSRGWNSSQNPTTSLLHCP

YP_009935514.1 cytochrome c biogenesis B [Sapindus mukorossi]

1.6e-79

91.98

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Query:  MRRLFLSLYHKQIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHWVIQI
        MRRLFL LYHKQIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGH VIQI
Subjt:  MRRLFLSLYHKQIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHWVIQI

Query:  SCLFCGFPMFKLLYQFGRSRMDRVNILLGSLVLTLQCDIHSHLALGITSSRGWNSSQNPTTS
        SC+FCGFPM +LLYQFGRS MDR+NI LGSLVLTL C IHS  ALGITSS GWNSSQNPTTS
Subjt:  SCLFCGFPMFKLLYQFGRSRMDRVNILLGSLVLTLQCDIHSHLALGITSSRGWNSSQNPTTS

TrEMBL top hits

e value

%identity

Alignment

A0A3Q9CS08 Cytochrome c biogenesis B

3.7e-82

92.22

Show/hide

Query:  MRRLFLSLYHKQIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHWVIQI
        MRRLFLSLYHK+IFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGH VIQI
Subjt:  MRRLFLSLYHKQIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHWVIQI

Query:  SCLFCGFPMFKLLYQFGRSRMDRVNILLGSLVLTLQCDIHSHLALGITSSRGWNSSQNPTTSLLHCP
        SCLFCGFPMFKL YQFGRS MDR+NILLGSLVLTL C IHS  ALGITSSRGWNSSQNPTTS    P
Subjt:  SCLFCGFPMFKLLYQFGRSRMDRVNILLGSLVLTLQCDIHSHLALGITSSRGWNSSQNPTTSLLHCP

A0A7D6C7C3 Cytochrome c biogenesis B

4.0e-81

91.02

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Query:  MRRLFLSLYHKQIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHWVIQI
        MRRLFLSLYHK+IFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGH VIQI
Subjt:  MRRLFLSLYHKQIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHWVIQI

Query:  SCLFCGFPMFKLLYQFGRSRMDRVNILLGSLVLTLQCDIHSHLALGITSSRGWNSSQNPTTSLLHCP
        SC+FCGFPM KL YQFGRS MDR+NILLGSLVLTL C IHS  ALGITSSRGWNSSQNPTTS    P
Subjt:  SCLFCGFPMFKLLYQFGRSRMDRVNILLGSLVLTLQCDIHSHLALGITSSRGWNSSQNPTTSLLHCP

A0A7H1CQR6 Cytochrome c biogenesis B

7.6e-80

91.98

Show/hide

Query:  MRRLFLSLYHKQIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHWVIQI
        MRRLFL LYHKQIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGH VIQI
Subjt:  MRRLFLSLYHKQIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHWVIQI

Query:  SCLFCGFPMFKLLYQFGRSRMDRVNILLGSLVLTLQCDIHSHLALGITSSRGWNSSQNPTTS
        SC+FCGFPM +LLYQFGRS MDR+NI LGSLVLTL C IHS  ALGITSS GWNSSQNPTTS
Subjt:  SCLFCGFPMFKLLYQFGRSRMDRVNILLGSLVLTLQCDIHSHLALGITSSRGWNSSQNPTTS

G3EIY1 Cytochrome c biogenesis B

2.8e-82

91.02

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Query:  MRRLFLSLYHKQIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHWVIQI
        MRRLFL LYHK+IFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQL+GHWVIQI
Subjt:  MRRLFLSLYHKQIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHWVIQI

Query:  SCLFCGFPMFKLLYQFGRSRMDRVNILLGSLVLTLQCDIHSHLALGITSSRGWNSSQNPTTSLLHCP
        SCLFCGFPM KL YQFGRS MDR+NILLGSLVLTL C IHS  ALGITSSRGWNSSQNPTTS    P
Subjt:  SCLFCGFPMFKLLYQFGRSRMDRVNILLGSLVLTLQCDIHSHLALGITSSRGWNSSQNPTTSLLHCP

G3EU22 Cytochrome c biogenesis B

3.7e-82

92.22

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Query:  MRRLFLSLYHKQIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHWVIQI
        MRRLFLSLYHK+IFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGH VIQI
Subjt:  MRRLFLSLYHKQIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHWVIQI

Query:  SCLFCGFPMFKLLYQFGRSRMDRVNILLGSLVLTLQCDIHSHLALGITSSRGWNSSQNPTTSLLHCP
        SCLFCGFPMFKL YQFGRS MDR+NILLGSLVLTL C IHS  ALGITSSRGWNSSQNPTTS    P
Subjt:  SCLFCGFPMFKLLYQFGRSRMDRVNILLGSLVLTLQCDIHSHLALGITSSRGWNSSQNPTTSLLHCP

SwissProt top hits

e value

%identity

Alignment

P38454 Putative cytochrome c biogenesis ccmB-like mitochondrial protein

8.2e-47

58.86

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Query:  RLFLSLYHKQIF--PSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHWVIQI
        ++FL L+++ I    ST IT+FS FL YIVVTPLM+GF KDF CH HLG I I  LF F P  F +N+ EDGTLELYYLS YCL KILL +L GHWV+QI
Subjt:  RLFLSLYHKQIF--PSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHWVIQI

Query:  SCLFCGFPMFKLLYQFGRSRMDRVNILLGSLVLTLQCDIHSHLALGITSSRGWNSSQNPTTSLLHCPQPFLVPLL
        S +FC FP+ +LLYQF +S+M+   I++GS + TL C IHS LALGITS+ GWNS QN TT       P L+PL+
Subjt:  SCLFCGFPMFKLLYQFGRSRMDRVNILLGSLVLTLQCDIHSHLALGITSSRGWNSSQNPTTSLLHCPQPFLVPLL

P93280 Putative cytochrome c biogenesis ccmB-like mitochondrial protein

1.6e-66

77.59

Show/hide

Query:  MRRLFLSLYHKQIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHWVIQI
        MRRLF  LY+K IF STPITSFS FL YIVVTPLMLGFEKDF CH HLG I I  LF F  A F RNEKEDGTLELYYLS YCLPKILLLQLVGHWVIQI
Subjt:  MRRLFLSLYHKQIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHWVIQI

Query:  SCLFCGFPMFKLLYQFGRSRMDRVNILLGSLVLTLQCDIHSHLALGITSSRGWNSSQNPTTSLLHCPQPFLVPL
        SC+FCGFPM +LLYQFGRS MD +NILLGSLVLTL C IHS LALGITSS GWNSSQN TT       P L+PL
Subjt:  SCLFCGFPMFKLLYQFGRSRMDRVNILLGSLVLTLQCDIHSHLALGITSSRGWNSSQNPTTSLLHCPQPFLVPL

Arabidopsis top hits

e value

%identity

Alignment

ATMG00110.1 cytochrome C biogenesis 206

1.1e-78

84.48

Show/hide

Query:  MRRLFLSLYHKQIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHWVIQI
        MRRLFL LYHK IF STPITSFS FLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLS YCLPKILLLQLVGH VIQI
Subjt:  MRRLFLSLYHKQIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHWVIQI

Query:  SCLFCGFPMFKLLYQFGRSRMDRVNILLGSLVLTLQCDIHSHLALGITSSRGWNSSQNPTTSLLHCPQPFLVPL
        S +FCGFPM +L YQFGRS MDR+NI LGSLVLTL C IHS  ALGITSS GWNSSQNPTTS      P L+PL
Subjt:  SCLFCGFPMFKLLYQFGRSRMDRVNILLGSLVLTLQCDIHSHLALGITSSRGWNSSQNPTTSLLHCPQPFLVPL

Sequences

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CDS sequence

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ATGAGACGACTCTTTCTTTCACTATATCATAAACAAATCTTCCCCTCCACACCAATCACGAGTTTTTCTCCATTCCTCTCGTATATCGTCGTCACGCCCTTAATGCTAGG
TTTTGAAAAAGACTTTTCATGTCATTCCCATTTAGGTCCGATTCGGATCCCTCCGTTGTTTCCTTTTCCTCCCGCACCTTTTCCTCGAAATGAGAAAGAAGATGGTACAC
TCGAATTGTATTATTTAAGTGCTTATTGCTTGCCAAAGATCCTACTTCTACAATTGGTAGGTCACTGGGTTATTCAAATAAGTTGTCTTTTTTGTGGTTTTCCCATGTTC
AAACTTCTATACCAATTCGGTCGATCCAGAATGGATCGGGTAAACATTCTATTAGGGAGCCTGGTCTTGACTCTTCAGTGTGATATTCATTCTCATTTGGCTCTTGGAAT
CACATCCAGCCGGGGTTGGAACAGCTCGCAAAATCCAACCACTTCCTTACTTCATTGCCCTCAACCCTTTCTCGTACCTCTATTGAAAGAGAATGGTTTCATGTTCCTTC
ATCGATTGGTTATTCCTCCCCGTTCATATCTCTCTTTCCAATTTCGGTCTCTCTGA

mRNA sequence

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Protein sequence

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MRRLFLSLYHKQIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHWVIQISCLFCGFPMF
KLLYQFGRSRMDRVNILLGSLVLTLQCDIHSHLALGITSSRGWNSSQNPTTSLLHCPQPFLVPLLKENGFMFLHRLVIPPRSYLSFQFRSL

Cmc07g0186531 (gene) of Melon (Charmono) v1.1 genome