CuGenDBv2

Gene ID	Cmc07g0186661
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ribulose bisphosphate carboxylase large chain
Genome location	CMiso1.1chr07:4630426..4630890
RNA-Seq Expression	Cmc07g0186661
Synteny	Cmc07g0186661
Gene Ontology terms	GO:0009853 - photorespiration (biological process) GO:0019253 - reductive pentose-phosphate cycle (biological process) GO:0009507 - chloroplast (cellular component) GO:0000287 - magnesium ion binding (molecular function) GO:0004497 - monooxygenase activity (molecular function) GO:0016984 - ribulose-bisphosphate carboxylase activity (molecular function)
InterPro domains	IPR000685 - Ribulose bisphosphate carboxylase, large subunit, C-terminal IPR033966 - RuBisCO IPR036376 - Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

AAA84607.2 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Sabia sp. Qiu 91025]

3.6e-76

89.61

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Query:  MHAVIDRQKNHGMHFRVLVKALRMSGGDHIHAGIVVGKLEGKREITLGFVDLLRDDFLEKDRSRDIYFTQGWVSLPGVLPMAFSGIHVWHMTALTKIFGD
        MHAVIDRQKNHG+HFRVL KALRMSGGDHIHAG VVGKLEG+REITLGFVDLLRDDF+EKDRSR IYFTQGWVS+PGVLP+A  GIHVWHM ALT+IFGD
Subjt:  MHAVIDRQKNHGMHFRVLVKALRMSGGDHIHAGIVVGKLEGKREITLGFVDLLRDDFLEKDRSRDIYFTQGWVSLPGVLPMAFSGIHVWHMTALTKIFGD

Query:  DSVLQFGEGTLGHPWGHAPGAIANRVALEACVQARNEGRDLAREGNEIIHEACK
        DSVLQFG GTLGHPWG+APGA+ANRVALEACVQARNEGRDLAREGNEII EACK
Subjt:  DSVLQFGEGTLGHPWGHAPGAIANRVALEACVQARNEGRDLAREGNEIIHEACK

ABX10755.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Plagiorhegma dubium]

4.7e-76

90.26

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Query:  MHAVIDRQKNHGMHFRVLVKALRMSGGDHIHAGIVVGKLEGKREITLGFVDLLRDDFLEKDRSRDIYFTQGWVSLPGVLPMAFSGIHVWHMTALTKIFGD
        MHAVIDRQKNHGMHFRVL KALRMSGGDHIHAG VVGKLEG+REITLGFVDLLRDDF+EKDRSR IYFTQ WVSLPGVLP+A  GIHVWHM ALT+IFGD
Subjt:  MHAVIDRQKNHGMHFRVLVKALRMSGGDHIHAGIVVGKLEGKREITLGFVDLLRDDFLEKDRSRDIYFTQGWVSLPGVLPMAFSGIHVWHMTALTKIFGD

Query:  DSVLQFGEGTLGHPWGHAPGAIANRVALEACVQARNEGRDLAREGNEIIHEACK
        DSVLQFG GTLGHPWG+APGA+ANRVALEACVQARNEGRDLAREGNEII EACK
Subjt:  DSVLQFGEGTLGHPWGHAPGAIANRVALEACVQARNEGRDLAREGNEIIHEACK

KAA0066868.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Cucumis melo var. makuwa]

2.2e-81

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Query:  IDRQKNHGMHFRVLVKALRMSGGDHIHAGIVVGKLEGKREITLGFVDLLRDDFLEKDRSRDIYFTQGWVSLPGVLPMAFSGIHVWHMTALTKIFGDDSVL
        ++RQKNHGMHFRVLVKALRMSGGDHIHAGIVVGKLEGKREITLGFVDLLRDDFLEKDRSRDIYFTQGWVSLPGVLPMAFSGIHVWHMTALT+IFGDDSVL
Subjt:  IDRQKNHGMHFRVLVKALRMSGGDHIHAGIVVGKLEGKREITLGFVDLLRDDFLEKDRSRDIYFTQGWVSLPGVLPMAFSGIHVWHMTALTKIFGDDSVL

Query:  QFGEGTLGHPWGHAPGAIANRVALEACVQARNEGRDLAREGNEIIHEACK
        QFGEGTLGHPWGHAPGAIANRVALEACVQARNEGRDLAREGNEIIHEACK
Subjt:  QFGEGTLGHPWGHAPGAIANRVALEACVQARNEGRDLAREGNEIIHEACK

YP_009169360.1 ribulose 1,5-bisphosphate carboxylase/oxygenase large subunit' [Clematis terniflora]

4.7e-76

90.26

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Query:  MHAVIDRQKNHGMHFRVLVKALRMSGGDHIHAGIVVGKLEGKREITLGFVDLLRDDFLEKDRSRDIYFTQGWVSLPGVLPMAFSGIHVWHMTALTKIFGD
        MHAVIDRQKNHGMHFRVL KALRMSGGDHIHAG VVGKLEG+REITLGFVDLLRDDF+EKDRSR IYFTQ WVSLPGVLP+A  GIHVWHM ALT+IFGD
Subjt:  MHAVIDRQKNHGMHFRVLVKALRMSGGDHIHAGIVVGKLEGKREITLGFVDLLRDDFLEKDRSRDIYFTQGWVSLPGVLPMAFSGIHVWHMTALTKIFGD

Query:  DSVLQFGEGTLGHPWGHAPGAIANRVALEACVQARNEGRDLAREGNEIIHEACK
        DSVLQFG GTLGHPWG+APGA+ANRVALEACVQARNEGRDLAREGNEII EACK
Subjt:  DSVLQFGEGTLGHPWGHAPGAIANRVALEACVQARNEGRDLAREGNEIIHEACK

YP_009729657.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Ranunculus cantoniensis]

4.7e-76

90.26

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Query:  MHAVIDRQKNHGMHFRVLVKALRMSGGDHIHAGIVVGKLEGKREITLGFVDLLRDDFLEKDRSRDIYFTQGWVSLPGVLPMAFSGIHVWHMTALTKIFGD
        MHAVIDRQKNHGMHFRVL KALRMSGGDHIHAG VVGKLEG+REITLGFVDLLRDDF+EKDRSR IYFTQ WVSLPGVLP+A  GIHVWHM ALT+IFGD
Subjt:  MHAVIDRQKNHGMHFRVLVKALRMSGGDHIHAGIVVGKLEGKREITLGFVDLLRDDFLEKDRSRDIYFTQGWVSLPGVLPMAFSGIHVWHMTALTKIFGD

Query:  DSVLQFGEGTLGHPWGHAPGAIANRVALEACVQARNEGRDLAREGNEIIHEACK
        DSVLQFG GTLGHPWG+APGA+ANRVALEACVQARNEGRDLAREGNEII EACK
Subjt:  DSVLQFGEGTLGHPWGHAPGAIANRVALEACVQARNEGRDLAREGNEIIHEACK

TrEMBL top hits

e value

%identity

Alignment

A0A1W6CEK2 Ribulose bisphosphate carboxylase large chain

2.3e-76

90.26

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Query:  MHAVIDRQKNHGMHFRVLVKALRMSGGDHIHAGIVVGKLEGKREITLGFVDLLRDDFLEKDRSRDIYFTQGWVSLPGVLPMAFSGIHVWHMTALTKIFGD
        MHAVIDRQKNHGMHFRVL KALRMSGGDHIHAG VVGKLEG+REITLGFVDLLRDDF+EKDRSR IYFTQ WVSLPGVLP+A  GIHVWHM ALT+IFGD
Subjt:  MHAVIDRQKNHGMHFRVLVKALRMSGGDHIHAGIVVGKLEGKREITLGFVDLLRDDFLEKDRSRDIYFTQGWVSLPGVLPMAFSGIHVWHMTALTKIFGD

Query:  DSVLQFGEGTLGHPWGHAPGAIANRVALEACVQARNEGRDLAREGNEIIHEACK
        DSVLQFG GTLGHPWG+APGA+ANRVALEACVQARNEGRDLAREGNEII EACK
Subjt:  DSVLQFGEGTLGHPWGHAPGAIANRVALEACVQARNEGRDLAREGNEIIHEACK

A0A346KND2 Ribulose bisphosphate carboxylase large chain

2.3e-76

90.26

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Query:  MHAVIDRQKNHGMHFRVLVKALRMSGGDHIHAGIVVGKLEGKREITLGFVDLLRDDFLEKDRSRDIYFTQGWVSLPGVLPMAFSGIHVWHMTALTKIFGD
        MHAVIDRQKNHGMHFRVL KALRMSGGDHIHAG VVGKLEG+REITLGFVDLLRDDF+EKDRSR IYFTQ WVSLPGVLP+A  GIHVWHM ALT+IFGD
Subjt:  MHAVIDRQKNHGMHFRVLVKALRMSGGDHIHAGIVVGKLEGKREITLGFVDLLRDDFLEKDRSRDIYFTQGWVSLPGVLPMAFSGIHVWHMTALTKIFGD

Query:  DSVLQFGEGTLGHPWGHAPGAIANRVALEACVQARNEGRDLAREGNEIIHEACK
        DSVLQFG GTLGHPWG+APGA+ANRVALEACVQARNEGRDLAREGNEII EACK
Subjt:  DSVLQFGEGTLGHPWGHAPGAIANRVALEACVQARNEGRDLAREGNEIIHEACK

A0A5A7VGG7 Ribulose bisphosphate carboxylase large chain

1.1e-81

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Query:  IDRQKNHGMHFRVLVKALRMSGGDHIHAGIVVGKLEGKREITLGFVDLLRDDFLEKDRSRDIYFTQGWVSLPGVLPMAFSGIHVWHMTALTKIFGDDSVL
        ++RQKNHGMHFRVLVKALRMSGGDHIHAGIVVGKLEGKREITLGFVDLLRDDFLEKDRSRDIYFTQGWVSLPGVLPMAFSGIHVWHMTALT+IFGDDSVL
Subjt:  IDRQKNHGMHFRVLVKALRMSGGDHIHAGIVVGKLEGKREITLGFVDLLRDDFLEKDRSRDIYFTQGWVSLPGVLPMAFSGIHVWHMTALTKIFGDDSVL

Query:  QFGEGTLGHPWGHAPGAIANRVALEACVQARNEGRDLAREGNEIIHEACK
        QFGEGTLGHPWGHAPGAIANRVALEACVQARNEGRDLAREGNEIIHEACK
Subjt:  QFGEGTLGHPWGHAPGAIANRVALEACVQARNEGRDLAREGNEIIHEACK

A0A7H1JFX3 Ribulose bisphosphate carboxylase large chain

2.3e-76

90.26

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Query:  MHAVIDRQKNHGMHFRVLVKALRMSGGDHIHAGIVVGKLEGKREITLGFVDLLRDDFLEKDRSRDIYFTQGWVSLPGVLPMAFSGIHVWHMTALTKIFGD
        MHAVIDRQKNHGMHFRVL KALRMSGGDHIHAG VVGKLEG+REITLGFVDLLRDDF+EKDRSR IYFTQ WVSLPGVLP+A  GIHVWHM ALT+IFGD
Subjt:  MHAVIDRQKNHGMHFRVLVKALRMSGGDHIHAGIVVGKLEGKREITLGFVDLLRDDFLEKDRSRDIYFTQGWVSLPGVLPMAFSGIHVWHMTALTKIFGD

Query:  DSVLQFGEGTLGHPWGHAPGAIANRVALEACVQARNEGRDLAREGNEIIHEACK
        DSVLQFG GTLGHPWG+APGA+ANRVALEACVQARNEGRDLAREGNEII EACK
Subjt:  DSVLQFGEGTLGHPWGHAPGAIANRVALEACVQARNEGRDLAREGNEIIHEACK

Q33067 Ribulose bisphosphate carboxylase large chain (Fragment)

1.8e-76

89.61

Show/hide

Query:  MHAVIDRQKNHGMHFRVLVKALRMSGGDHIHAGIVVGKLEGKREITLGFVDLLRDDFLEKDRSRDIYFTQGWVSLPGVLPMAFSGIHVWHMTALTKIFGD
        MHAVIDRQKNHG+HFRVL KALRMSGGDHIHAG VVGKLEG+REITLGFVDLLRDDF+EKDRSR IYFTQGWVS+PGVLP+A  GIHVWHM ALT+IFGD
Subjt:  MHAVIDRQKNHGMHFRVLVKALRMSGGDHIHAGIVVGKLEGKREITLGFVDLLRDDFLEKDRSRDIYFTQGWVSLPGVLPMAFSGIHVWHMTALTKIFGD

Query:  DSVLQFGEGTLGHPWGHAPGAIANRVALEACVQARNEGRDLAREGNEIIHEACK
        DSVLQFG GTLGHPWG+APGA+ANRVALEACVQARNEGRDLAREGNEII EACK
Subjt:  DSVLQFGEGTLGHPWGHAPGAIANRVALEACVQARNEGRDLAREGNEIIHEACK

SwissProt top hits

e value

%identity

Alignment

P28416 Ribulose bisphosphate carboxylase large chain (Fragment)

1.8e-78

89.61

Show/hide

Query:  MHAVIDRQKNHGMHFRVLVKALRMSGGDHIHAGIVVGKLEGKREITLGFVDLLRDDFLEKDRSRDIYFTQGWVSLPGVLPMAFSGIHVWHMTALTKIFGD
        MHAVIDRQKNHG+HFRVL KALRMSGGDHIHAG VVGKLEG+REITLGFVDLLRDDF+EKDRSR IYFTQ WVSLPGVLP+A  GIHVWHM ALT+IFGD
Subjt:  MHAVIDRQKNHGMHFRVLVKALRMSGGDHIHAGIVVGKLEGKREITLGFVDLLRDDFLEKDRSRDIYFTQGWVSLPGVLPMAFSGIHVWHMTALTKIFGD

Query:  DSVLQFGEGTLGHPWGHAPGAIANRVALEACVQARNEGRDLAREGNEIIHEACK
        DSVLQFG GTLGHPWG+APGA+ANRVALEACVQARNEGRDLAREGNEII EACK
Subjt:  DSVLQFGEGTLGHPWGHAPGAIANRVALEACVQARNEGRDLAREGNEIIHEACK

P28441 Ribulose bisphosphate carboxylase large chain

1.8e-78

89.61

Show/hide

Query:  MHAVIDRQKNHGMHFRVLVKALRMSGGDHIHAGIVVGKLEGKREITLGFVDLLRDDFLEKDRSRDIYFTQGWVSLPGVLPMAFSGIHVWHMTALTKIFGD
        MHAVIDRQKNHG+HFRVL KALRMSGGDHIHAG VVGKLEG+REITLGFVDLLRDDF+EKDRSR IYFTQ WVSLPGVLP+A  GIHVWHM ALT+IFGD
Subjt:  MHAVIDRQKNHGMHFRVLVKALRMSGGDHIHAGIVVGKLEGKREITLGFVDLLRDDFLEKDRSRDIYFTQGWVSLPGVLPMAFSGIHVWHMTALTKIFGD

Query:  DSVLQFGEGTLGHPWGHAPGAIANRVALEACVQARNEGRDLAREGNEIIHEACK
        DSVLQFG GTLGHPWG+APGA+ANRVALEACVQARNEGRDLAREGNEII EACK
Subjt:  DSVLQFGEGTLGHPWGHAPGAIANRVALEACVQARNEGRDLAREGNEIIHEACK

P28456 Ribulose bisphosphate carboxylase large chain (Fragment)

2.4e-78

88.96

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Query:  MHAVIDRQKNHGMHFRVLVKALRMSGGDHIHAGIVVGKLEGKREITLGFVDLLRDDFLEKDRSRDIYFTQGWVSLPGVLPMAFSGIHVWHMTALTKIFGD
        MHAVIDRQKNHGMHFRVL KALRMSGGDHIHAG VVGKLEG+R+ITLGFVDLLRDDF+EKDRSR IYFTQ WVS+PGVLP+A  GIHVWHM ALT+IFGD
Subjt:  MHAVIDRQKNHGMHFRVLVKALRMSGGDHIHAGIVVGKLEGKREITLGFVDLLRDDFLEKDRSRDIYFTQGWVSLPGVLPMAFSGIHVWHMTALTKIFGD

Query:  DSVLQFGEGTLGHPWGHAPGAIANRVALEACVQARNEGRDLAREGNEIIHEACK
        DSVLQFG GTLGHPWG+APGA+ANRVALEACVQARNEGRDLAREGNEII EACK
Subjt:  DSVLQFGEGTLGHPWGHAPGAIANRVALEACVQARNEGRDLAREGNEIIHEACK

P48703 Ribulose bisphosphate carboxylase large chain (Fragment)

1.4e-78

89.61

Show/hide

Query:  MHAVIDRQKNHGMHFRVLVKALRMSGGDHIHAGIVVGKLEGKREITLGFVDLLRDDFLEKDRSRDIYFTQGWVSLPGVLPMAFSGIHVWHMTALTKIFGD
        MHAVIDRQKNHGMHFRVL KALRMSGGDHIHAG VVGKLEG+REITLGFVDLLRDDF+EKDRSR IYFTQ WVSLPGVLP+A  GIHVWHM ALT+IFGD
Subjt:  MHAVIDRQKNHGMHFRVLVKALRMSGGDHIHAGIVVGKLEGKREITLGFVDLLRDDFLEKDRSRDIYFTQGWVSLPGVLPMAFSGIHVWHMTALTKIFGD

Query:  DSVLQFGEGTLGHPWGHAPGAIANRVALEACVQARNEGRDLAREGNEIIHEACK
        DSVLQFG GTLGHPWG+APGA+ANRVALEACVQARNEGRDLAREGN+II EACK
Subjt:  DSVLQFGEGTLGHPWGHAPGAIANRVALEACVQARNEGRDLAREGNEIIHEACK

Q32223 Ribulose bisphosphate carboxylase large chain (Fragment)

3.1e-78

88.31

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Query:  MHAVIDRQKNHGMHFRVLVKALRMSGGDHIHAGIVVGKLEGKREITLGFVDLLRDDFLEKDRSRDIYFTQGWVSLPGVLPMAFSGIHVWHMTALTKIFGD
        MHAVIDRQKNHGMHFRVL KALRMSGGDHIHAG VVGKLEG+REITLGFVDLLRDDF+EKDRSR IYFTQ WVS+PGVLP+A  GIHVWHM ALT+IFGD
Subjt:  MHAVIDRQKNHGMHFRVLVKALRMSGGDHIHAGIVVGKLEGKREITLGFVDLLRDDFLEKDRSRDIYFTQGWVSLPGVLPMAFSGIHVWHMTALTKIFGD

Query:  DSVLQFGEGTLGHPWGHAPGAIANRVALEACVQARNEGRDLAREGNEIIHEACK
        D+VLQFG GTLGHPWG+APGA+ANRVALEACVQARNEGRDLAREGNE+I EACK
Subjt:  DSVLQFGEGTLGHPWGHAPGAIANRVALEACVQARNEGRDLAREGNEIIHEACK

Arabidopsis top hits

e value

%identity

Alignment

ATCG00490.1 ribulose-bisphosphate carboxylases

6.0e-77

87.01

Show/hide

Query:  MHAVIDRQKNHGMHFRVLVKALRMSGGDHIHAGIVVGKLEGKREITLGFVDLLRDDFLEKDRSRDIYFTQGWVSLPGVLPMAFSGIHVWHMTALTKIFGD
        MHAVIDRQKNHGMHFRVL KALR+SGGDHIHAG VVGKLEG RE TLGFVDLLRDD++EKDRSR I+FTQ WVSLPGVLP+A  GIHVWHM ALT+IFGD
Subjt:  MHAVIDRQKNHGMHFRVLVKALRMSGGDHIHAGIVVGKLEGKREITLGFVDLLRDDFLEKDRSRDIYFTQGWVSLPGVLPMAFSGIHVWHMTALTKIFGD

Query:  DSVLQFGEGTLGHPWGHAPGAIANRVALEACVQARNEGRDLAREGNEIIHEACK
        DSVLQFG GTLGHPWG+APGA+ANRVALEACVQARNEGRDLA EGNEII EACK
Subjt:  DSVLQFGEGTLGHPWGHAPGAIANRVALEACVQARNEGRDLAREGNEIIHEACK

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCATGCTGTTATTGATAGACAGAAGAATCATGGTATGCACTTTCGTGTATTAGTTAAAGCGTTACGTATGTCCGGTGGAGACCATATTCACGCTGGTATCGTAGTAGG
TAAACTTGAAGGGAAAAGAGAAATCACTTTAGGATTTGTAGATTTACTACGTGATGATTTTCTTGAAAAAGACCGAAGTCGTGATATTTATTTCACTCAAGGTTGGGTCT
CTTTACCCGGTGTTTTGCCAATGGCTTTTAGTGGTATTCACGTTTGGCATATGACTGCTCTAACCAAGATTTTTGGAGATGATTCTGTACTACAATTCGGTGAAGGAACT
TTGGGGCACCCTTGGGGTCATGCACCTGGTGCCATAGCTAATCGGGTAGCTCTAGAAGCATGTGTACAAGCTCGTAATGAGGGACGTGATCTTGCTCGTGAGGGTAATGA
AATTATCCATGAGGCTTGTAAATAA

mRNA sequence

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Protein sequence

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MHAVIDRQKNHGMHFRVLVKALRMSGGDHIHAGIVVGKLEGKREITLGFVDLLRDDFLEKDRSRDIYFTQGWVSLPGVLPMAFSGIHVWHMTALTKIFGDDSVLQFGEGT
LGHPWGHAPGAIANRVALEACVQARNEGRDLAREGNEIIHEACK

Cmc07g0186661 (gene) of Melon (Charmono) v1.1 genome