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Cmc07g0186671 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc07g0186671
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRibulose bisphosphate carboxylase large chain
Genome locationCMiso1.1chr07:4631003..4631269
RNA-Seq ExpressionCmc07g0186671
SyntenyCmc07g0186671
Gene Ontology termsGO:0009853 - photorespiration (biological process)
GO:0019253 - reductive pentose-phosphate cycle (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0000287 - magnesium ion binding (molecular function)
GO:0004497 - monooxygenase activity (molecular function)
GO:0016984 - ribulose-bisphosphate carboxylase activity (molecular function)
InterPro domainsIPR000685 - Ribulose bisphosphate carboxylase, large subunit, C-terminal
IPR036376 - Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAK77912.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Stauntonia duclouxii]9.1e-4086.36Show/hide
Query:  MGCTIKPKLGLFAKNYGRAVYECLLGGLDFTKDDKNVNSQPFMRWRDHFLFCAEAILKSQAKTGEVKGHYFNATVGTCEEMMKRDIFS
        +GCTIKPKLGL AKNYGRAVYECL GGLDFTKDD+NVNSQPFMRWRD FLFCAEAI KSQA+TGE+KGHYFNAT GTCEEMMKR +F+
Subjt:  MGCTIKPKLGLFAKNYGRAVYECLLGGLDFTKDDKNVNSQPFMRWRDHFLFCAEAILKSQAKTGEVKGHYFNATVGTCEEMMKRDIFS

AFP23598.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Laggera alata]9.1e-4087.5Show/hide
Query:  MGCTIKPKLGLFAKNYGRAVYECLLGGLDFTKDDKNVNSQPFMRWRDHFLFCAEAILKSQAKTGEVKGHYFNATVGTCEEMMKRDIFS
        +GCTIKPKLGL AKNYGRAVYECL GGLDFTKDD+NVNSQPFMRWRD FLFCAEAILKSQA+TGE+KGHY NAT GTCEEMMKR IF+
Subjt:  MGCTIKPKLGLFAKNYGRAVYECLLGGLDFTKDDKNVNSQPFMRWRDHFLFCAEAILKSQAKTGEVKGHYFNATVGTCEEMMKRDIFS

AFP23682.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Scorzonera divaricata]9.1e-4087.5Show/hide
Query:  MGCTIKPKLGLFAKNYGRAVYECLLGGLDFTKDDKNVNSQPFMRWRDHFLFCAEAILKSQAKTGEVKGHYFNATVGTCEEMMKRDIFS
        +GCTIKPKLGL AKNYGRAVYECL GGLDFTKDD+NVNSQPFMRWRD FLFCAEAILKSQA+TGE+KGHY NAT GTCEEMMKR IF+
Subjt:  MGCTIKPKLGLFAKNYGRAVYECLLGGLDFTKDDKNVNSQPFMRWRDHFLFCAEAILKSQAKTGEVKGHYFNATVGTCEEMMKRDIFS

AOO78022.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Synotis changiana]7.0e-4087.5Show/hide
Query:  MGCTIKPKLGLFAKNYGRAVYECLLGGLDFTKDDKNVNSQPFMRWRDHFLFCAEAILKSQAKTGEVKGHYFNATVGTCEEMMKRDIFS
        +GCTIKPKLGL AKNYGRAVYECL GGLDFTKDD+NVNSQPFMRWRD FLFCAEAI KSQA+TGE+KGHYFNAT GTCEEMMKR IF+
Subjt:  MGCTIKPKLGLFAKNYGRAVYECLLGGLDFTKDDKNVNSQPFMRWRDHFLFCAEAILKSQAKTGEVKGHYFNATVGTCEEMMKRDIFS

QXL59708.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Senecio nudicaulis]7.0e-4087.5Show/hide
Query:  MGCTIKPKLGLFAKNYGRAVYECLLGGLDFTKDDKNVNSQPFMRWRDHFLFCAEAILKSQAKTGEVKGHYFNATVGTCEEMMKRDIFS
        +GCTIKPKLGL AKNYGRAVYECL GGLDFTKDD+NVNSQPFMRWRD FLFCAEAI KSQA+TGE+KGHYFNAT GTCEEMMKR IF+
Subjt:  MGCTIKPKLGLFAKNYGRAVYECLLGGLDFTKDDKNVNSQPFMRWRDHFLFCAEAILKSQAKTGEVKGHYFNATVGTCEEMMKRDIFS

TrEMBL top hitse value%identityAlignment
A0A1C9HFK6 Ribulose bisphosphate carboxylase large chain (Fragment)3.4e-4087.5Show/hide
Query:  MGCTIKPKLGLFAKNYGRAVYECLLGGLDFTKDDKNVNSQPFMRWRDHFLFCAEAILKSQAKTGEVKGHYFNATVGTCEEMMKRDIFS
        +GCTIKPKLGL AKNYGRAVYECL GGLDFTKDD+NVNSQPFMRWRD FLFCAEAI KSQA+TGE+KGHYFNAT GTCEEMMKR IF+
Subjt:  MGCTIKPKLGLFAKNYGRAVYECLLGGLDFTKDDKNVNSQPFMRWRDHFLFCAEAILKSQAKTGEVKGHYFNATVGTCEEMMKRDIFS

J9QEP4 Ribulose bisphosphate carboxylase large chain (Fragment)4.4e-4087.5Show/hide
Query:  MGCTIKPKLGLFAKNYGRAVYECLLGGLDFTKDDKNVNSQPFMRWRDHFLFCAEAILKSQAKTGEVKGHYFNATVGTCEEMMKRDIFS
        +GCTIKPKLGL AKNYGRAVYECL GGLDFTKDD+NVNSQPFMRWRD FLFCAEAILKSQA+TGE+KGHY NAT GTCEEMMKR IF+
Subjt:  MGCTIKPKLGLFAKNYGRAVYECLLGGLDFTKDDKNVNSQPFMRWRDHFLFCAEAILKSQAKTGEVKGHYFNATVGTCEEMMKRDIFS

J9QFL2 Ribulose bisphosphate carboxylase large chain (Fragment)4.4e-4087.5Show/hide
Query:  MGCTIKPKLGLFAKNYGRAVYECLLGGLDFTKDDKNVNSQPFMRWRDHFLFCAEAILKSQAKTGEVKGHYFNATVGTCEEMMKRDIFS
        +GCTIKPKLGL AKNYGRAVYECL GGLDFTKDD+NVNSQPFMRWRD FLFCAEAILKSQA+TGE+KGHY NAT GTCEEMMKR IF+
Subjt:  MGCTIKPKLGLFAKNYGRAVYECLLGGLDFTKDDKNVNSQPFMRWRDHFLFCAEAILKSQAKTGEVKGHYFNATVGTCEEMMKRDIFS

Q2TR70 Ribulose bisphosphate carboxylase large chain (Fragment)4.4e-4086.36Show/hide
Query:  MGCTIKPKLGLFAKNYGRAVYECLLGGLDFTKDDKNVNSQPFMRWRDHFLFCAEAILKSQAKTGEVKGHYFNATVGTCEEMMKRDIFS
        +GCTIKPKLGL AKNYGRAVYECL GGLDFTKDD+NVNSQPFMRWRD FLFCAEA+ KSQA+TGE+KGHYFNAT GTCEEMMKR IF+
Subjt:  MGCTIKPKLGLFAKNYGRAVYECLLGGLDFTKDDKNVNSQPFMRWRDHFLFCAEAILKSQAKTGEVKGHYFNATVGTCEEMMKRDIFS

Q95EG6 Ribulose bisphosphate carboxylase large chain (Fragment)4.4e-4086.36Show/hide
Query:  MGCTIKPKLGLFAKNYGRAVYECLLGGLDFTKDDKNVNSQPFMRWRDHFLFCAEAILKSQAKTGEVKGHYFNATVGTCEEMMKRDIFS
        +GCTIKPKLGL AKNYGRAVYECL GGLDFTKDD+NVNSQPFMRWRD FLFCAEAI KSQA+TGE+KGHYFNAT GTCEEMMKR +F+
Subjt:  MGCTIKPKLGLFAKNYGRAVYECLLGGLDFTKDDKNVNSQPFMRWRDHFLFCAEAILKSQAKTGEVKGHYFNATVGTCEEMMKRDIFS

SwissProt top hitse value%identityAlignment
P27064 Ribulose bisphosphate carboxylase large chain3.5e-4286.36Show/hide
Query:  MGCTIKPKLGLFAKNYGRAVYECLLGGLDFTKDDKNVNSQPFMRWRDHFLFCAEAILKSQAKTGEVKGHYFNATVGTCEEMMKRDIFS
        +GCTIKPKLGL AKNYGRAVYECL GGLDFTKDD+NVNSQPFMRWRD FLFCAEAI KSQA+TGE+KGHY NAT GTCEEMMKR IF+
Subjt:  MGCTIKPKLGLFAKNYGRAVYECLLGGLDFTKDDKNVNSQPFMRWRDHFLFCAEAILKSQAKTGEVKGHYFNATVGTCEEMMKRDIFS

P28460 Ribulose bisphosphate carboxylase large chain (Fragment)3.5e-4286.36Show/hide
Query:  MGCTIKPKLGLFAKNYGRAVYECLLGGLDFTKDDKNVNSQPFMRWRDHFLFCAEAILKSQAKTGEVKGHYFNATVGTCEEMMKRDIFS
        +GCTIKPKLGL AKNYGRAVYECL GGLDFTKDD+NVNSQPFMRWRD FLFCAEAI KSQA+TGE+KGHY NAT GTCEEMMKR IF+
Subjt:  MGCTIKPKLGLFAKNYGRAVYECLLGGLDFTKDDKNVNSQPFMRWRDHFLFCAEAILKSQAKTGEVKGHYFNATVGTCEEMMKRDIFS

P48693 Ribulose bisphosphate carboxylase large chain3.5e-4286.36Show/hide
Query:  MGCTIKPKLGLFAKNYGRAVYECLLGGLDFTKDDKNVNSQPFMRWRDHFLFCAEAILKSQAKTGEVKGHYFNATVGTCEEMMKRDIFS
        +GCTIKPKLGL AKNYGRAVYECL GGLDFTKDD+NVNSQPFMRWRD FLFCAEAI KSQA+TGE+KGHY NAT GTCEEMMKR IF+
Subjt:  MGCTIKPKLGLFAKNYGRAVYECLLGGLDFTKDDKNVNSQPFMRWRDHFLFCAEAILKSQAKTGEVKGHYFNATVGTCEEMMKRDIFS

P48706 Ribulose bisphosphate carboxylase large chain3.5e-4286.36Show/hide
Query:  MGCTIKPKLGLFAKNYGRAVYECLLGGLDFTKDDKNVNSQPFMRWRDHFLFCAEAILKSQAKTGEVKGHYFNATVGTCEEMMKRDIFS
        +GCTIKPKLGL AKNYGRAVYECL GGLDFTKDD+NVNSQPFMRWRD FLFCAEAI KSQA+TGE+KGHY NAT GTCEEMMKR IF+
Subjt:  MGCTIKPKLGLFAKNYGRAVYECLLGGLDFTKDDKNVNSQPFMRWRDHFLFCAEAILKSQAKTGEVKGHYFNATVGTCEEMMKRDIFS

Q31669 Ribulose bisphosphate carboxylase large chain (Fragment)3.5e-4286.36Show/hide
Query:  MGCTIKPKLGLFAKNYGRAVYECLLGGLDFTKDDKNVNSQPFMRWRDHFLFCAEAILKSQAKTGEVKGHYFNATVGTCEEMMKRDIFS
        +GCTIKPKLGL AKNYGRAVYECL GGLDFTKDD+NVNSQPFMRWRD FLFCAEAI KSQA+TGE+KGHY NAT GTCEEMMKR IF+
Subjt:  MGCTIKPKLGLFAKNYGRAVYECLLGGLDFTKDDKNVNSQPFMRWRDHFLFCAEAILKSQAKTGEVKGHYFNATVGTCEEMMKRDIFS

Arabidopsis top hitse value%identityAlignment
AT2G07732.1 Ribulose bisphosphate carboxylase large chain, catalytic domain1.4e-3378.95Show/hide
Query:  AKNYGRAVYECLLGGLDFTKDDKNVNSQPFMRWRDHFLFCAEAILKSQAKTGEVKGHYFNATVGTCEEMMKRDIFS
        AKNYGRAVYECL GGL FTKDD+NVNSQPFMRWRD FLFCAEA+ K+QA+TG +KGHY NAT GTCEEM+KR +F+
Subjt:  AKNYGRAVYECLLGGLDFTKDDKNVNSQPFMRWRDHFLFCAEAILKSQAKTGEVKGHYFNATVGTCEEMMKRDIFS

ATCG00490.1 ribulose-bisphosphate carboxylases1.2e-4284.09Show/hide
Query:  MGCTIKPKLGLFAKNYGRAVYECLLGGLDFTKDDKNVNSQPFMRWRDHFLFCAEAILKSQAKTGEVKGHYFNATVGTCEEMMKRDIFS
        +GCTIKPKLGL AKNYGRAVYECL GGLDFTKDD+NVNSQPFMRWRD FLFCAEAI KSQA+TGE+KGHY NAT GTCEEM+KR +F+
Subjt:  MGCTIKPKLGLFAKNYGRAVYECLLGGLDFTKDDKNVNSQPFMRWRDHFLFCAEAILKSQAKTGEVKGHYFNATVGTCEEMMKRDIFS

ATMG00280.1 Ribulose bisphosphate carboxylase large chain, catalytic domain8.0e-3478.95Show/hide
Query:  AKNYGRAVYECLLGGLDFTKDDKNVNSQPFMRWRDHFLFCAEAILKSQAKTGEVKGHYFNATVGTCEEMMKRDIFS
        AKNYGRAVYECL GGL FTKDD+NVNSQPFMRWRD FLFCAEA+ K+QA+TG +KGHY NAT GTCEEM+KR +F+
Subjt:  AKNYGRAVYECLLGGLDFTKDDKNVNSQPFMRWRDHFLFCAEAILKSQAKTGEVKGHYFNATVGTCEEMMKRDIFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGTACTATTAAACCAAAATTAGGATTATTCGCTAAGAATTATGGTAGAGCAGTTTATGAATGTCTACTCGGTGGACTTGATTTTACCAAAGATGATAAAAACGT
GAATTCCCAACCATTTATGCGTTGGAGAGACCATTTCCTATTTTGTGCAGAAGCTATTTTGAAATCACAAGCTAAAACAGGTGAAGTCAAAGGACATTACTTTAATGCTA
CTGTAGGTACATGCGAAGAAATGATGAAAAGGGATATATTTTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTGTACTATTAAACCAAAATTAGGATTATTCGCTAAGAATTATGGTAGAGCAGTTTATGAATGTCTACTCGGTGGACTTGATTTTACCAAAGATGATAAAAACGT
GAATTCCCAACCATTTATGCGTTGGAGAGACCATTTCCTATTTTGTGCAGAAGCTATTTTGAAATCACAAGCTAAAACAGGTGAAGTCAAAGGACATTACTTTAATGCTA
CTGTAGGTACATGCGAAGAAATGATGAAAAGGGATATATTTTCCTGA
Protein sequenceShow/hide protein sequence
MGCTIKPKLGLFAKNYGRAVYECLLGGLDFTKDDKNVNSQPFMRWRDHFLFCAEAILKSQAKTGEVKGHYFNATVGTCEEMMKRDIFS