CuGenDBv2

Gene ID	Cmc07g0186681
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ribulose bisphosphate carboxylase large chain
Genome location	CMiso1.1chr07:4631528..4631764
RNA-Seq Expression	Cmc07g0186681
Synteny	Cmc07g0186681
Gene Ontology terms	GO:0009853 - photorespiration (biological process) GO:0019253 - reductive pentose-phosphate cycle (biological process) GO:0009507 - chloroplast (cellular component) GO:0000287 - magnesium ion binding (molecular function) GO:0004497 - monooxygenase activity (molecular function) GO:0016984 - ribulose-bisphosphate carboxylase activity (molecular function)
InterPro domains	IPR017443 - Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal IPR033966 - RuBisCO IPR036422 - RuBisCO large subunit, N-terminal domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

AIG54729.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Dillenia grandifolia]

6.4e-13

80.77

Show/hide

Query:  ETKDTDILVAFQVTPQSEVPPLRGEAGIAVAAESSTGTWTTVWTDEITSLDR
        ETKDTDIL AF+VTPQ+E+PP   EAG AVAAESSTGTWTTVWTD +TSLDR
Subjt:  ETKDTDILVAFQVTPQSEVPPLRGEAGIAVAAESSTGTWTTVWTDEITSLDR

AUR28390.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Goodyera oblongifolia]

6.4e-13

82.69

Show/hide

Query:  ETKDTDILVAFQVTPQSEVPPLRGEAGIAVAAESSTGTWTTVWTDEITSLDR
        ETKDTDIL AF+VTPQ  VPP  GEAG AVAAESSTGTWTTVWTD +TSLDR
Subjt:  ETKDTDILVAFQVTPQSEVPPLRGEAGIAVAAESSTGTWTTVWTDEITSLDR

AYE20222.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Orobanche sp. ARIZ 344844]

8.4e-13

82.69

Show/hide

Query:  ETKDTDILVAFQVTPQSEVPPLRGEAGIAVAAESSTGTWTTVWTDEITSLDR
        ETKDTDIL AF+VTPQ  VPP   EAG AVAAESSTGTWTTVWTDE+TSLDR
Subjt:  ETKDTDILVAFQVTPQSEVPPLRGEAGIAVAAESSTGTWTTVWTDEITSLDR

QCX35970.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Aerides rosea]

6.4e-13

82.69

Show/hide

Query:  ETKDTDILVAFQVTPQSEVPPLRGEAGIAVAAESSTGTWTTVWTDEITSLDR
        ETKDTDIL AF+VTPQ  VPP  GEAG AVAAESSTGTWTTVWTD +TSLDR
Subjt:  ETKDTDILVAFQVTPQSEVPPLRGEAGIAVAAESSTGTWTTVWTDEITSLDR

QCX35971.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Aerides rosea]

6.4e-13

82.69

Show/hide

Query:  ETKDTDILVAFQVTPQSEVPPLRGEAGIAVAAESSTGTWTTVWTDEITSLDR
        ETKDTDIL AF+VTPQ  VPP  GEAG AVAAESSTGTWTTVWTD +TSLDR
Subjt:  ETKDTDILVAFQVTPQSEVPPLRGEAGIAVAAESSTGTWTTVWTDEITSLDR

TrEMBL top hits

e value

%identity

Alignment

A0A0D3MEQ6 Ribulose bisphosphate carboxylase large chain (Fragment)

3.1e-13

80.77

Show/hide

Query:  ETKDTDILVAFQVTPQSEVPPLRGEAGIAVAAESSTGTWTTVWTDEITSLDR
        ETKDTDIL AF+VTPQ+E+PP   EAG AVAAESSTGTWTTVWTD +TSLDR
Subjt:  ETKDTDILVAFQVTPQSEVPPLRGEAGIAVAAESSTGTWTTVWTDEITSLDR

A0A386NCH1 Ribulose bisphosphate carboxylase large chain (Fragment)

4.1e-13

82.69

Show/hide

Query:  ETKDTDILVAFQVTPQSEVPPLRGEAGIAVAAESSTGTWTTVWTDEITSLDR
        ETKDTDIL AF+VTPQ  VPP   EAG AVAAESSTGTWTTVWTDE+TSLDR
Subjt:  ETKDTDILVAFQVTPQSEVPPLRGEAGIAVAAESSTGTWTTVWTDEITSLDR

A0A3G1MV98 Ribulose bisphosphate carboxylase large chain (Fragment)

3.1e-13

82.69

Show/hide

Query:  ETKDTDILVAFQVTPQSEVPPLRGEAGIAVAAESSTGTWTTVWTDEITSLDR
        ETKDTDIL AF+VTPQ  VPP  GEAG AVAAESSTGTWTTVWTD +TSLDR
Subjt:  ETKDTDILVAFQVTPQSEVPPLRGEAGIAVAAESSTGTWTTVWTDEITSLDR

A0A4Y5QME9 Ribulose bisphosphate carboxylase large chain (Fragment)

3.1e-13

82.69

Show/hide

Query:  ETKDTDILVAFQVTPQSEVPPLRGEAGIAVAAESSTGTWTTVWTDEITSLDR
        ETKDTDIL AF+VTPQ  VPP  GEAG AVAAESSTGTWTTVWTD +TSLDR
Subjt:  ETKDTDILVAFQVTPQSEVPPLRGEAGIAVAAESSTGTWTTVWTDEITSLDR

A0A4Y5QMG0 Ribulose bisphosphate carboxylase large chain (Fragment)

3.1e-13

82.69

Show/hide

Query:  ETKDTDILVAFQVTPQSEVPPLRGEAGIAVAAESSTGTWTTVWTDEITSLDR
        ETKDTDIL AF+VTPQ  VPP  GEAG AVAAESSTGTWTTVWTD +TSLDR
Subjt:  ETKDTDILVAFQVTPQSEVPPLRGEAGIAVAAESSTGTWTTVWTDEITSLDR

SwissProt top hits

e value

%identity

Alignment

A9LYA9 Ribulose bisphosphate carboxylase large chain

7.2e-15

80.77

Show/hide

Query:  ETKDTDILVAFQVTPQSEVPPLRGEAGIAVAAESSTGTWTTVWTDEITSLDR
        ETKDTDIL AF+VTPQ  VPP   EAG AVAAESSTGTWTTVWTD +TSLDR
Subjt:  ETKDTDILVAFQVTPQSEVPPLRGEAGIAVAAESSTGTWTTVWTDEITSLDR

P28389 Ribulose bisphosphate carboxylase large chain (Fragment)

5.5e-15

80.77

Show/hide

Query:  ETKDTDILVAFQVTPQSEVPPLRGEAGIAVAAESSTGTWTTVWTDEITSLDR
        ETKDTDIL AF+VTPQ  VPP   EAG AVAAESSTGTWTTVWTD +TSLDR
Subjt:  ETKDTDILVAFQVTPQSEVPPLRGEAGIAVAAESSTGTWTTVWTDEITSLDR

P92401 Ribulose bisphosphate carboxylase large chain (Fragment)

3.2e-15

79.25

Show/hide

Query:  NETKDTDILVAFQVTPQSEVPPLRGEAGIAVAAESSTGTWTTVWTDEITSLDR
        N+TKDTDIL AF+VTPQ  VPP   EAG AVAAESSTGTWTTVWTD +TSLDR
Subjt:  NETKDTDILVAFQVTPQSEVPPLRGEAGIAVAAESSTGTWTTVWTDEITSLDR

P92406 Ribulose bisphosphate carboxylase large chain (Fragment)

3.2e-15

79.25

Show/hide

Query:  NETKDTDILVAFQVTPQSEVPPLRGEAGIAVAAESSTGTWTTVWTDEITSLDR
        N+TKDTDIL AF+VTPQ  VPP   EAG AVAAESSTGTWTTVWTD +TSLDR
Subjt:  NETKDTDILVAFQVTPQSEVPPLRGEAGIAVAAESSTGTWTTVWTDEITSLDR

Q3V526 Ribulose bisphosphate carboxylase large chain

7.2e-15

80.77

Show/hide

Query:  ETKDTDILVAFQVTPQSEVPPLRGEAGIAVAAESSTGTWTTVWTDEITSLDR
        ETKDTDIL AF+VTPQ  VPP   EAG AVAAESSTGTWTTVWTD +TSLDR
Subjt:  ETKDTDILVAFQVTPQSEVPPLRGEAGIAVAAESSTGTWTTVWTDEITSLDR

Arabidopsis top hits

e value

%identity

Alignment

ATCG00490.1 ribulose-bisphosphate carboxylases

5.1e-16

80.77

Show/hide

Query:  ETKDTDILVAFQVTPQSEVPPLRGEAGIAVAAESSTGTWTTVWTDEITSLDR
        ETKDTDIL AF+VTPQ  VPP   EAG AVAAESSTGTWTTVWTD +TSLDR
Subjt:  ETKDTDILVAFQVTPQSEVPPLRGEAGIAVAAESSTGTWTTVWTDEITSLDR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCAAGATCGGATGATTTGTCACTTTCTAAATCTTATTCTTTCTCAACAATATCTCTGTCTTATGGAGCTTTATAATGAAACCAAAGATACTGATATCTTGGTAGCATT
CCAAGTAACTCCTCAATCAGAAGTTCCACCGCTTCGTGGGGAAGCAGGGATCGCTGTAGCTGCTGAATCTTCTACTGGTACATGGACAACTGTGTGGACCGATGAGATTA
CCAGTCTTGATCGTTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MQDRMICHFLNLILSQQYLCLMELYNETKDTDILVAFQVTPQSEVPPLRGEAGIAVAAESSTGTWTTVWTDEITSLDR

Cmc07g0186681 (gene) of Melon (Charmono) v1.1 genome