CuGenDBv2

Gene ID	Cmc07g0186691
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	30S ribosomal protein S11, chloroplastic
Genome location	CMiso1.1chr07:4631995..4632195
RNA-Seq Expression	Cmc07g0186691
Synteny	Cmc07g0186691
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0009507 - chloroplast (cellular component) GO:1990904 - ribonucleoprotein complex (cellular component) GO:0003735 - structural constituent of ribosome (molecular function) GO:0019843 - rRNA binding (molecular function)
InterPro domains	IPR001971 - Ribosomal protein S11 IPR036967 - Ribosomal protein S11 superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

TYH97719.1 hypothetical protein ES332_A12G260900v1 [Gossypium tomentosum]

6.0e-20

84.62

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Query:  GRVISWSFAGTCGIKSTRKGTPFAAQIATGYAIRAVVDQGMQRAEVMIKGLGLRRDATLRAIPRS
        GRVISWSFAGTCG K TR+GTPFAAQ A G AIRAVVDQGMQRAEVMIKG GL RDA LRAI RS
Subjt:  GRVISWSFAGTCGIKSTRKGTPFAAQIATGYAIRAVVDQGMQRAEVMIKGLGLRRDATLRAIPRS

YP_009650502.1 ribosomal protein S11 [Stellera chamaejasme]

3.0e-19

83.08

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Query:  GRVISWSFAGTCGIKSTRKGTPFAAQIATGYAIRAVVDQGMQRAEVMIKGLGLRRDATLRAIPRS
        GRVISWS AGTCG + TR+GTPFAAQIA G AIRAVVDQGMQRAEVMIKG GL RDA LRAI RS
Subjt:  GRVISWSFAGTCGIKSTRKGTPFAAQIATGYAIRAVVDQGMQRAEVMIKGLGLRRDATLRAIPRS

YP_009663853.1 ribosomal protein S11 [Daphne tangutica]

3.0e-19

83.08

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Query:  GRVISWSFAGTCGIKSTRKGTPFAAQIATGYAIRAVVDQGMQRAEVMIKGLGLRRDATLRAIPRS
        GRVISWS AGTCG + TR+GTPFAAQIA G AIRAVVDQGMQRAEVMIKG GL RDA LRAI RS
Subjt:  GRVISWSFAGTCGIKSTRKGTPFAAQIATGYAIRAVVDQGMQRAEVMIKGLGLRRDATLRAIPRS

YP_009993714.1 ribosomal protein S11 [Phaleria macrocarpa]

1.3e-19

83.08

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Query:  GRVISWSFAGTCGIKSTRKGTPFAAQIATGYAIRAVVDQGMQRAEVMIKGLGLRRDATLRAIPRS
        GRVISWS AGTCG + TR+GTPFAAQIA G AIR VVDQGMQRAEVMIKGLGL RDA LRAI RS
Subjt:  GRVISWSFAGTCGIKSTRKGTPFAAQIATGYAIRAVVDQGMQRAEVMIKGLGLRRDATLRAIPRS

YP_010017027.1 ribosomal protein S11 [Sterculia monosperma]

1.8e-19

83.08

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Query:  GRVISWSFAGTCGIKSTRKGTPFAAQIATGYAIRAVVDQGMQRAEVMIKGLGLRRDATLRAIPRS
        GRVISWS AGTCG K TR+GTPFAAQ A G+AIRAVVDQGMQRAEVMIKG GL RDA LRAI RS
Subjt:  GRVISWSFAGTCGIKSTRKGTPFAAQIATGYAIRAVVDQGMQRAEVMIKGLGLRRDATLRAIPRS

TrEMBL top hits

e value

%identity

Alignment

A0A5D2N4W1 Uncharacterized protein

2.9e-20

84.62

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Query:  GRVISWSFAGTCGIKSTRKGTPFAAQIATGYAIRAVVDQGMQRAEVMIKGLGLRRDATLRAIPRS
        GRVISWSFAGTCG K TR+GTPFAAQ A G AIRAVVDQGMQRAEVMIKG GL RDA LRAI RS
Subjt:  GRVISWSFAGTCGIKSTRKGTPFAAQIATGYAIRAVVDQGMQRAEVMIKGLGLRRDATLRAIPRS

A0A7G9XJA6 30S ribosomal protein S11, chloroplastic

6.5e-20

83.08

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Query:  GRVISWSFAGTCGIKSTRKGTPFAAQIATGYAIRAVVDQGMQRAEVMIKGLGLRRDATLRAIPRS
        GRVISWS AGTCG + TR+GTPFAAQIA G AIR VVDQGMQRAEVMIKGLGL RDA LRAI RS
Subjt:  GRVISWSFAGTCGIKSTRKGTPFAAQIATGYAIRAVVDQGMQRAEVMIKGLGLRRDATLRAIPRS

A0A7L9CVM2 30S ribosomal protein S11, chloroplastic

8.5e-20

83.08

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Query:  GRVISWSFAGTCGIKSTRKGTPFAAQIATGYAIRAVVDQGMQRAEVMIKGLGLRRDATLRAIPRS
        GRVISWS AGTCG K TR+GTPFAAQ A G+AIRAVVDQGMQRAEVMIKG GL RDA LRAI RS
Subjt:  GRVISWSFAGTCGIKSTRKGTPFAAQIATGYAIRAVVDQGMQRAEVMIKGLGLRRDATLRAIPRS

A0A7T3P9C0 30S ribosomal protein S11

1.4e-19

83.08

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Query:  GRVISWSFAGTCGIKSTRKGTPFAAQIATGYAIRAVVDQGMQRAEVMIKGLGLRRDATLRAIPRS
        GRVISWS AGTCG + TR+GTPFAAQIA G AIRAVVDQGMQRAEVMIKG GL RDA LRAI RS
Subjt:  GRVISWSFAGTCGIKSTRKGTPFAAQIATGYAIRAVVDQGMQRAEVMIKGLGLRRDATLRAIPRS

A0A7T3U2S3 30S ribosomal protein S11

1.4e-19

83.08

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Query:  GRVISWSFAGTCGIKSTRKGTPFAAQIATGYAIRAVVDQGMQRAEVMIKGLGLRRDATLRAIPRS
        GRVISWS AGTCG + TR+GTPFAAQIA G AIRAVVDQGMQRAEVMIKG GL RDA LRAI RS
Subjt:  GRVISWSFAGTCGIKSTRKGTPFAAQIATGYAIRAVVDQGMQRAEVMIKGLGLRRDATLRAIPRS

SwissProt top hits

e value

%identity

Alignment

A0ZZ68 30S ribosomal protein S11, chloroplastic

6.7e-22

83.08

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Query:  GRVISWSFAGTCGIKSTRKGTPFAAQIATGYAIRAVVDQGMQRAEVMIKGLGLRRDATLRAIPRS
        GRVISWS AGTCG K TR+GTPFAAQ A G AIRAVVDQGMQRAEVMIKG GL RDA LRAI RS
Subjt:  GRVISWSFAGTCGIKSTRKGTPFAAQIATGYAIRAVVDQGMQRAEVMIKGLGLRRDATLRAIPRS

B1A968 30S ribosomal protein S11, chloroplastic

1.5e-21

81.54

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Query:  GRVISWSFAGTCGIKSTRKGTPFAAQIATGYAIRAVVDQGMQRAEVMIKGLGLRRDATLRAIPRS
        GRVISWS AGTCG + TR+GTPFAAQ A G AIRAVVDQGMQRAEVMIKG GL RDA LRAI RS
Subjt:  GRVISWSFAGTCGIKSTRKGTPFAAQIATGYAIRAVVDQGMQRAEVMIKGLGLRRDATLRAIPRS

Q2L937 30S ribosomal protein S11, chloroplastic

6.7e-22

83.08

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Query:  GRVISWSFAGTCGIKSTRKGTPFAAQIATGYAIRAVVDQGMQRAEVMIKGLGLRRDATLRAIPRS
        GRVISWS AGTCG K TR+GTPFAAQ A G AIRAVVDQGMQRAEVMIKG GL RDA LRAI RS
Subjt:  GRVISWSFAGTCGIKSTRKGTPFAAQIATGYAIRAVVDQGMQRAEVMIKGLGLRRDATLRAIPRS

Q4VZK2 30S ribosomal protein S11, chloroplastic

1.9e-21

81.54

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Query:  GRVISWSFAGTCGIKSTRKGTPFAAQIATGYAIRAVVDQGMQRAEVMIKGLGLRRDATLRAIPRS
        GRVISWS AGTCG K TR+GTPFAAQ A G AIR VVDQGMQRAEVMIKG GL RDA LRAI RS
Subjt:  GRVISWSFAGTCGIKSTRKGTPFAAQIATGYAIRAVVDQGMQRAEVMIKGLGLRRDATLRAIPRS

Q6EW19 30S ribosomal protein S11, chloroplastic

8.7e-22

81.54

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Query:  GRVISWSFAGTCGIKSTRKGTPFAAQIATGYAIRAVVDQGMQRAEVMIKGLGLRRDATLRAIPRS
        GRV+SWS AGTCG K TR+GTPFAAQ A G AIRAVVDQGMQRAEVMIKG GL RDA LRAI RS
Subjt:  GRVISWSFAGTCGIKSTRKGTPFAAQIATGYAIRAVVDQGMQRAEVMIKGLGLRRDATLRAIPRS

Arabidopsis top hits

e value

%identity

Alignment

ATCG00750.1 ribosomal protein S11

5.2e-22

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Query:  GRVISWSFAGTCGIKSTRKGTPFAAQIATGYAIRAVVDQGMQRAEVMIKGLGLRRDATLRAIPRS
        GRVISWS AGTCG + TR+GTPFAAQ A G AIRAVVDQGMQRAEV IKG GL RDA LRAI RS
Subjt:  GRVISWSFAGTCGIKSTRKGTPFAAQIATGYAIRAVVDQGMQRAEVMIKGLGLRRDATLRAIPRS

Sequences

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CDS sequence

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ATGGGTCGGGTAATTTCTTGGTCCTTTGCCGGTACGTGTGGAATCAAAAGTACAAGAAAAGGGACACCATTTGCGGCTCAAATCGCAACAGGATATGCTATTCGA
GCAGTAGTGGATCAAGGGATGCAACGAGCTGAAGTTATGATAAAGGGCCTTGGTCTCAGAAGAGATGCAACATTAAGAGCTATTCCAAGAAGTTGA

mRNA sequence

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Protein sequence

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MGRVISWSFAGTCGIKSTRKGTPFAAQIATGYAIRAVVDQGMQRAEVMIKGLGLRRDATLRAIPRS

Cmc07g0186691 (gene) of Melon (Charmono) v1.1 genome