| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 1.3e-62 | 84.25 | Show/hide |
Query: MLRSIRILLSIAILYDYEIWKMDVKIAFLNGNFQESIFISQPEGFITQGQKKKVCKLNRSIYELKQASRSWNIRFDTVIKSYGFDQNVDEPCVYKKINKG
ML+SIRILLSIA YDYEIW+MDVK AFLNGN +ESIF+SQPEGFITQGQ++KVCKLNRSIY LKQASRSWNIRFDT IKSYGFDQNVDEPCVYKKINKG
Subjt: MLRSIRILLSIAILYDYEIWKMDVKIAFLNGNFQESIFISQPEGFITQGQKKKVCKLNRSIYELKQASRSWNIRFDTVIKSYGFDQNVDEPCVYKKINKG
Query: KVVFLVLCMDDILLIENYIGYLVDIKTCLAAQFQMKDLGEAHYVLG
KV FLVL +DDILLI N +GYL D+K LAAQFQMKDLGEA YVLG
Subjt: KVVFLVLCMDDILLIENYIGYLVDIKTCLAAQFQMKDLGEAHYVLG
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| KAA0033121.1 gag/pol protein [Cucumis melo var. makuwa] | 1.7e-62 | 84.25 | Show/hide |
Query: MLRSIRILLSIAILYDYEIWKMDVKIAFLNGNFQESIFISQPEGFITQGQKKKVCKLNRSIYELKQASRSWNIRFDTVIKSYGFDQNVDEPCVYKKINKG
ML+SIRILLSIA YDYEIWKMDV AFLNGN +ESIF+SQPEGFITQGQ++KVCKLNRSIY LKQASRSWNIRFDT IKSYGF+QNVDEPCVYKKINKG
Subjt: MLRSIRILLSIAILYDYEIWKMDVKIAFLNGNFQESIFISQPEGFITQGQKKKVCKLNRSIYELKQASRSWNIRFDTVIKSYGFDQNVDEPCVYKKINKG
Query: KVVFLVLCMDDILLIENYIGYLVDIKTCLAAQFQMKDLGEAHYVLG
KVVFLVL +DDILLI N +GYL D+K LAAQFQMKDLGEA YVLG
Subjt: KVVFLVLCMDDILLIENYIGYLVDIKTCLAAQFQMKDLGEAHYVLG
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| KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa] | 6.4e-62 | 83.56 | Show/hide |
Query: MLRSIRILLSIAILYDYEIWKMDVKIAFLNGNFQESIFISQPEGFITQGQKKKVCKLNRSIYELKQASRSWNIRFDTVIKSYGFDQNVDEPCVYKKINKG
ML+SIRILLSIA YDYEIW+MDVK AFLNGN +ESIF+SQPEGFITQGQ++KVCKLNRSIY LKQASRSWNIRFDT IKSYGFDQNVDEPCVYKKINKG
Subjt: MLRSIRILLSIAILYDYEIWKMDVKIAFLNGNFQESIFISQPEGFITQGQKKKVCKLNRSIYELKQASRSWNIRFDTVIKSYGFDQNVDEPCVYKKINKG
Query: KVVFLVLCMDDILLIENYIGYLVDIKTCLAAQFQMKDLGEAHYVLG
KV FLVL +DDILLI N +GYL D+K LAAQFQMKDLGE YVLG
Subjt: KVVFLVLCMDDILLIENYIGYLVDIKTCLAAQFQMKDLGEAHYVLG
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| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 1.3e-62 | 84.25 | Show/hide |
Query: MLRSIRILLSIAILYDYEIWKMDVKIAFLNGNFQESIFISQPEGFITQGQKKKVCKLNRSIYELKQASRSWNIRFDTVIKSYGFDQNVDEPCVYKKINKG
ML+SIRILLSIA YDYEIW+MDVK AFLNGN +ESIF+SQPEGFITQGQ++KVCKLNRSIY LKQASRSWNIRFDT IKSYGFDQNVDEPCVYKKINKG
Subjt: MLRSIRILLSIAILYDYEIWKMDVKIAFLNGNFQESIFISQPEGFITQGQKKKVCKLNRSIYELKQASRSWNIRFDTVIKSYGFDQNVDEPCVYKKINKG
Query: KVVFLVLCMDDILLIENYIGYLVDIKTCLAAQFQMKDLGEAHYVLG
KV FLVL +DDILLI N +GYL D+K LAAQFQMKDLGEA YVLG
Subjt: KVVFLVLCMDDILLIENYIGYLVDIKTCLAAQFQMKDLGEAHYVLG
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| TYK15984.1 gag/pol protein [Cucumis melo var. makuwa] | 1.3e-62 | 84.25 | Show/hide |
Query: MLRSIRILLSIAILYDYEIWKMDVKIAFLNGNFQESIFISQPEGFITQGQKKKVCKLNRSIYELKQASRSWNIRFDTVIKSYGFDQNVDEPCVYKKINKG
ML+SIRILLSIA YDYEIW+MDVK AFLNGN +ESIF+SQPEGFITQGQ++KVCKLNRSIY LKQASRSWNIRFDT IKSYGFDQNVDEPCVYKKINKG
Subjt: MLRSIRILLSIAILYDYEIWKMDVKIAFLNGNFQESIFISQPEGFITQGQKKKVCKLNRSIYELKQASRSWNIRFDTVIKSYGFDQNVDEPCVYKKINKG
Query: KVVFLVLCMDDILLIENYIGYLVDIKTCLAAQFQMKDLGEAHYVLG
KV FLVL +DDILLI N +GYL D+K LAAQFQMKDLGEA YVLG
Subjt: KVVFLVLCMDDILLIENYIGYLVDIKTCLAAQFQMKDLGEAHYVLG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T2V9 Gag/pol protein | 3.1e-62 | 83.56 | Show/hide |
Query: MLRSIRILLSIAILYDYEIWKMDVKIAFLNGNFQESIFISQPEGFITQGQKKKVCKLNRSIYELKQASRSWNIRFDTVIKSYGFDQNVDEPCVYKKINKG
ML+SIRILLSIA YDYEIW+MDVK AFLNGN +ESIF+SQPEGFITQGQ++KVCKLNRSIY LKQASRSWNIRFDT IKSYGFDQNVDEPCVYKKINKG
Subjt: MLRSIRILLSIAILYDYEIWKMDVKIAFLNGNFQESIFISQPEGFITQGQKKKVCKLNRSIYELKQASRSWNIRFDTVIKSYGFDQNVDEPCVYKKINKG
Query: KVVFLVLCMDDILLIENYIGYLVDIKTCLAAQFQMKDLGEAHYVLG
KV FLVL +DDILLI N +GYL D+K LAAQFQMKDLGE YVLG
Subjt: KVVFLVLCMDDILLIENYIGYLVDIKTCLAAQFQMKDLGEAHYVLG
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| A0A5A7TZD0 Gag/pol protein | 6.2e-63 | 84.25 | Show/hide |
Query: MLRSIRILLSIAILYDYEIWKMDVKIAFLNGNFQESIFISQPEGFITQGQKKKVCKLNRSIYELKQASRSWNIRFDTVIKSYGFDQNVDEPCVYKKINKG
ML+SIRILLSIA YDYEIW+MDVK AFLNGN +ESIF+SQPEGFITQGQ++KVCKLNRSIY LKQASRSWNIRFDT IKSYGFDQNVDEPCVYKKINKG
Subjt: MLRSIRILLSIAILYDYEIWKMDVKIAFLNGNFQESIFISQPEGFITQGQKKKVCKLNRSIYELKQASRSWNIRFDTVIKSYGFDQNVDEPCVYKKINKG
Query: KVVFLVLCMDDILLIENYIGYLVDIKTCLAAQFQMKDLGEAHYVLG
KV FLVL +DDILLI N +GYL D+K LAAQFQMKDLGEA YVLG
Subjt: KVVFLVLCMDDILLIENYIGYLVDIKTCLAAQFQMKDLGEAHYVLG
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| A0A5A7UYE8 Gag/pol protein | 6.2e-63 | 84.25 | Show/hide |
Query: MLRSIRILLSIAILYDYEIWKMDVKIAFLNGNFQESIFISQPEGFITQGQKKKVCKLNRSIYELKQASRSWNIRFDTVIKSYGFDQNVDEPCVYKKINKG
ML+SIRILLSIA YDYEIW+MDVK AFLNGN +ESIF+SQPEGFITQGQ++KVCKLNRSIY LKQASRSWNIRFDT IKSYGFDQNVDEPCVYKKINKG
Subjt: MLRSIRILLSIAILYDYEIWKMDVKIAFLNGNFQESIFISQPEGFITQGQKKKVCKLNRSIYELKQASRSWNIRFDTVIKSYGFDQNVDEPCVYKKINKG
Query: KVVFLVLCMDDILLIENYIGYLVDIKTCLAAQFQMKDLGEAHYVLG
KV FLVL +DDILLI N +GYL D+K LAAQFQMKDLGEA YVLG
Subjt: KVVFLVLCMDDILLIENYIGYLVDIKTCLAAQFQMKDLGEAHYVLG
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| A0A5D3CYF4 Gag/pol protein | 6.2e-63 | 84.25 | Show/hide |
Query: MLRSIRILLSIAILYDYEIWKMDVKIAFLNGNFQESIFISQPEGFITQGQKKKVCKLNRSIYELKQASRSWNIRFDTVIKSYGFDQNVDEPCVYKKINKG
ML+SIRILLSIA YDYEIW+MDVK AFLNGN +ESIF+SQPEGFITQGQ++KVCKLNRSIY LKQASRSWNIRFDT IKSYGFDQNVDEPCVYKKINKG
Subjt: MLRSIRILLSIAILYDYEIWKMDVKIAFLNGNFQESIFISQPEGFITQGQKKKVCKLNRSIYELKQASRSWNIRFDTVIKSYGFDQNVDEPCVYKKINKG
Query: KVVFLVLCMDDILLIENYIGYLVDIKTCLAAQFQMKDLGEAHYVLG
KV FLVL +DDILLI N +GYL D+K LAAQFQMKDLGEA YVLG
Subjt: KVVFLVLCMDDILLIENYIGYLVDIKTCLAAQFQMKDLGEAHYVLG
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| A0A5D3CZY3 Gag/pol protein | 8.1e-63 | 84.25 | Show/hide |
Query: MLRSIRILLSIAILYDYEIWKMDVKIAFLNGNFQESIFISQPEGFITQGQKKKVCKLNRSIYELKQASRSWNIRFDTVIKSYGFDQNVDEPCVYKKINKG
ML+SIRILLSIA YDYEIWKMDV AFLNGN +ESIF+SQPEGFITQGQ++KVCKLNRSIY LKQASRSWNIRFDT IKSYGF+QNVDEPCVYKKINKG
Subjt: MLRSIRILLSIAILYDYEIWKMDVKIAFLNGNFQESIFISQPEGFITQGQKKKVCKLNRSIYELKQASRSWNIRFDTVIKSYGFDQNVDEPCVYKKINKG
Query: KVVFLVLCMDDILLIENYIGYLVDIKTCLAAQFQMKDLGEAHYVLG
KVVFLVL +DDILLI N +GYL D+K LAAQFQMKDLGEA YVLG
Subjt: KVVFLVLCMDDILLIENYIGYLVDIKTCLAAQFQMKDLGEAHYVLG
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 4.5e-18 | 34.01 | Show/hide |
Query: LRSIRILLSIAILYDYEIWKMDVKIAFLNGNFQESIFISQPEGFITQGQKKKVCKLNRSIYELKQASRSWNIRFDTVIKSYGFDQNVDEPCVY--KKINK
+ S R +LS+ I Y+ ++ +MDVK AFLNG +E I++ P+G VCKLN++IY LKQA+R W F+ +K F + + C+Y K N
Subjt: LRSIRILLSIAILYDYEIWKMDVKIAFLNGNFQESIFISQPEGFITQGQKKKVCKLNRSIYELKQASRSWNIRFDTVIKSYGFDQNVDEPCVY--KKINK
Query: GKVVFLVLCMDDILLIENYIGYLVDIKTCLAAQFQMKDLGEAHYVLG
+ ++++L +DD+++ + + + K L +F+M DL E + +G
Subjt: GKVVFLVLCMDDILLIENYIGYLVDIKTCLAAQFQMKDLGEAHYVLG
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.5e-29 | 43.15 | Show/hide |
Query: LRSIRILLSIAILYDYEIWKMDVKIAFLNGNFQESIFISQPEGFITQGQKKKVCKLNRSIYELKQASRSWNIRFDTVIKSYGFDQNVDEPCVY-KKINKG
+ SIR +LS+A D E+ ++DVK AFL+G+ +E I++ QPEGF G+K VCKLN+S+Y LKQA R W ++FD+ +KS + + +PCVY K+ ++
Subjt: LRSIRILLSIAILYDYEIWKMDVKIAFLNGNFQESIFISQPEGFITQGQKKKVCKLNRSIYELKQASRSWNIRFDTVIKSYGFDQNVDEPCVY-KKINKG
Query: KVVFLVLCMDDILLIENYIGYLVDIKTCLAAQFQMKDLGEAHYVLG
+ L+L +DD+L++ G + +K L+ F MKDLG A +LG
Subjt: KVVFLVLCMDDILLIENYIGYLVDIKTCLAAQFQMKDLGEAHYVLG
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| Q12491 Transposon Ty2-B Gag-Pol polyprotein | 2.3e-06 | 30.88 | Show/hide |
Query: LSIAILYDYEIWKMDVKIAFLNGNFQESIFISQPEGFITQGQKKKVCKLNRSIYELKQASRSWNIRFDTVIKSYGFD-QNVDEPCVYKKINKGKVVFLVL
LSIA+ DY I ++D+ A+L + +E ++I P G K+ +L +S+Y LKQ+ +W ++T IKSY + ++ E + + K V + L
Subjt: LSIAILYDYEIWKMDVKIAFLNGNFQESIFISQPEGFITQGQKKKVCKLNRSIYELKQASRSWNIRFDTVIKSYGFD-QNVDEPCVYKKINKGKVVFLVL
Query: CMDDILLIENYIGYLVDIKTCLAAQFQMK--DLGEA
+DD++L + I T L Q+ K +LGE+
Subjt: CMDDILLIENYIGYLVDIKTCLAAQFQMK--DLGEA
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 9.0e-19 | 34.27 | Show/hide |
Query: SIRILLSIAILYDYEIWKMDVKIAFLNGNFQESIFISQPEGFITQGQKKKVCKLNRSIYELKQASRSWNIRFDTVIKSYGFDQNVDEPCVYKKINKGKVV
SIRI+L +A+ + I ++DV AFL G + +++SQP GFI + + VCKL +++Y LKQA R+W + + + GF +V + ++ +V
Subjt: SIRILLSIAILYDYEIWKMDVKIAFLNGNFQESIFISQPEGFITQGQKKKVCKLNRSIYELKQASRSWNIRFDTVIKSYGFDQNVDEPCVYKKINKGKVV
Query: FLVLCMDDILLIENYIGYLVDIKTCLAAQFQMKDLGEAHYVLG
++++ +DDIL+ N L + L+ +F +KD E HY LG
Subjt: FLVLCMDDILLIENYIGYLVDIKTCLAAQFQMKDLGEAHYVLG
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.6e-18 | 31.47 | Show/hide |
Query: SIRILLSIAILYDYEIWKMDVKIAFLNGNFQESIFISQPEGFITQGQKKKVCKLNRSIYELKQASRSWNIRFDTVIKSYGFDQNVDEPCVYKKINKGKVV
SIRI+L +A+ + I ++DV AFL G + +++SQP GF+ + + VC+L ++IY LKQA R+W + T + + GF ++ + ++ ++
Subjt: SIRILLSIAILYDYEIWKMDVKIAFLNGNFQESIFISQPEGFITQGQKKKVCKLNRSIYELKQASRSWNIRFDTVIKSYGFDQNVDEPCVYKKINKGKVV
Query: FLVLCMDDILLIENYIGYLVDIKTCLAAQFQMKDLGEAHYVLG
++++ +DDIL+ N L L+ +F +K+ + HY LG
Subjt: FLVLCMDDILLIENYIGYLVDIKTCLAAQFQMKDLGEAHYVLG
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