CuGenDBv2

Gene ID	Cmc07g0187501
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	NADH dehydrogenase subunit 4L
Genome location	CMiso1.1chr07:5469591..5470192
RNA-Seq Expression	Cmc07g0187501
Synteny	Cmc07g0187501
Gene Ontology terms	GO:0042773 - ATP synthesis coupled electron transport (biological process) GO:0005739 - mitochondrion (cellular component) GO:0009536 - plastid (cellular component) GO:0016020 - membrane (cellular component) GO:0016651 - oxidoreductase activity, acting on NAD(P)H (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

AEN56133.1 NADH dehydrogenase subunit 4L [Cucumis melo subsp. melo]

1.8e-35

100

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Query:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSILG
        MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSILG
Subjt:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSILG

AZP40300.1 NADH dehydrogenase subunit 4L [Cucumis melo var. momordica]

1.8e-35

100

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Query:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSILG
        MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSILG
Subjt:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSILG

YP_004849353.1 NADH dehydrogenase subunit 4L [Cucumis sativus]

9.0e-35

98.89

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Query:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSILG
        MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSI G
Subjt:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSILG

YP_009498153.1 NADH dehydrogenase subunit 4L [Senna tora]

1.5e-34

97.78

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Query:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSILG
        MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEF+NSI G
Subjt:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSILG

YP_009504857.1 Nad4L, partial [Senna occidentalis]

1.5e-34

97.78

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Query:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSILG
        MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEF+NSI G
Subjt:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSILG

TrEMBL top hits

e value

%identity

Alignment

A0A2Z4HGP5 NADH-ubiquinone oxidoreductase chain 4L

7.5e-35

97.78

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Query:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSILG
        MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEF+NSI G
Subjt:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSILG

A0A3Q9CS16 NADH dehydrogenase subunit 4L

8.8e-36

100

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Query:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSILG
        MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSILG
Subjt:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSILG

A0A7D6BYE9 NADH dehydrogenase subunit 4L

7.5e-35

97.78

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Query:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSILG
        MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEF+NSI G
Subjt:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSILG

G3EJ05 NADH dehydrogenase subunit 4L

4.4e-35

98.89

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Query:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSILG
        MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSI G
Subjt:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSILG

G3EU43 NADH dehydrogenase subunit 4L

8.8e-36

100

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Query:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSILG
        MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSILG
Subjt:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSILG

SwissProt top hits

e value

%identity

Alignment

B6ISX1 NADH-quinone oxidoreductase subunit K

4.4e-16

58.82

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Query:  LGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSILG
        LG  GIL+NRRN+ ++ M IE MLLAVN N + FSV  +D+ GQ F   + TVAAAE+AIGLAI V+ FR RGTIAVE +N + G
Subjt:  LGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSILG

P26851 NADH-ubiquinone oxidoreductase chain 4L

3.3e-24

74.44

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Query:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSILG
        MI+ +LGI GI LNR+NI IM M IE MLLAVN NFLVFSV  DDMMGQ FA  V TVAAAESAIGLAI VITFR+RGTIAVEF+N + G
Subjt:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSILG

Q04614 NADH-ubiquinone oxidoreductase chain 4L

4.5e-29

86.67

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Query:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSILG
        MII ILGI GILLNRRNI IM M IE MLLAVNSNFLVFSVS DDMMGQ FA LV TVAAAESAIGLAIFVITFRVRGTIAVEF+NSI G
Subjt:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSILG

Q37627 NADH-ubiquinone oxidoreductase chain 4L

2.7e-21

65.56

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Query:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSILG
        MI+ +LGI GI LNR+NI +M M IE MLLAVN NFL+FSV  DD +GQ FA L+ TVAAAESAIGLA+ V+ +R+RGTIAVEF+N + G
Subjt:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSILG

Q6N5N4 NADH-quinone oxidoreductase subunit K 1

5.7e-16

56.18

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Query:  IISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSILG
        ++  LG  GI LNR+N+ I+ M IE MLLAVN N + FS+  +D++GQ FA LV TVAAAE+AIGLA+ V+ FR RGTIAV+ +N + G
Subjt:  IISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSILG

Arabidopsis top hits

e value

%identity

Alignment

ATCG01070.1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L

8.8e-04

38.75

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Query:  ILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFS--VSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAV
        ++G+ G L+  RN+    M +E +L AVN NF+ FS    +  + G+ F   V  +AAAE+AIGLAI    +R R +I +
Subjt:  ILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFS--VSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAV

ATMG00650.1 NADH dehydrogenase subunit 4L

7.1e-38

96.67

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Query:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSILG
        MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQ FASLVPTVAAAESAIGLAIFVITFRVRGTIAVEF+NSI G
Subjt:  MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSILG

Sequences

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CDS sequence

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ATGATCATCTCTATTTTAGGTATTCGGGGAATCCTCCTTAATAGACGAAATATTCCTATTATGTCAATGCCAATTGAATCAATGTTATTAGCTGTGAATTCGAACTTTTT
GGTATTTTCCGTTTCTTCGGATGATATGATGGGTCAATCATTTGCTTCATTGGTTCCAACGGTGGCAGCTGCGGAATCCGCTATTGGGTTAGCCATTTTCGTTATTACTT
TCCGAGTCCGAGGGACTATTGCAGTAGAATTTCTTAATAGCATTCTAGGTTAA

mRNA sequence

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GTCCTACAGGAAGGGGGTCTCGAAATTCCCGATAAGAGGACAGGAGATATCATCTTCGCTCATCGGGGAAAGATTGAGAAAGGATATAATTCGCGATCTGGGGAGGACTG
AAGGTCATGGTTTTGAAATGAGGTGATCGACTGAATCCAAGTGCTTGGATCTGAGAGTCTCTCTACCTTCCAAAAGAAGATGGAAGTTTCTTCAAGGTGAAATCAAAGTG
CTAAAGCACGAACCCCCATTACTGATGGACAATTTGGATCTTTAACATTTGAATTTCTCTGACATTCTACGTTCCCGAAACGGATCCTATCAAATATTTCACATTTTCTA
TGATCATCTCTATTTTAGGTATTCGGGGAATCCTCCTTAATAGACGAAATATTCCTATTATGTCAATGCCAATTGAATCAATGTTATTAGCTGTGAATTCGAACTTTTTG
GTATTTTCCGTTTCTTCGGATGATATGATGGGTCAATCATTTGCTTCATTGGTTCCAACGGTGGCAGCTGCGGAATCCGCTATTGGGTTAGCCATTTTCGTTATTACTTT
CCGAGTCCGAGGGACTATTGCAGTAGAATTTCTTAATAGCATTCTAGGTTAA

Protein sequence

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MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFLNSILG

Cmc07g0187501 (gene) of Melon (Charmono) v1.1 genome