| GenBank top hits | e value | %identity | Alignment |
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| KAA0032884.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 6.4e-102 | 96.41 | Show/hide |
Query: MSCIRKFKLYQMDVKSALQNGYLNEEVYVAQPKGFVDYEFPQHVYKLNKALYVLKQAPKAWYERLTIYLGNKEYSRGGTDKILFTNRTNSDLIVAQIYVD
+SCIRKFKLYQM+VKSALQNGYLNEEVYVAQPKGFVDYEFPQHVYKLNKALYVLKQAP+AWYE LTIYLGNKEYSRGGTDKILFTNRTNSDLIVAQIYVD
Subjt: MSCIRKFKLYQMDVKSALQNGYLNEEVYVAQPKGFVDYEFPQHVYKLNKALYVLKQAPKAWYERLTIYLGNKEYSRGGTDKILFTNRTNSDLIVAQIYVD
Query: NIEFGGFPKAHVDNFIDIMKSEFEMSMVEELSCFLVLQIKQRSEGIFISQEKHVKNIVKKFGLDQSQHKRTPAMTHVKITKDINGTTVDHKCIGA
NIEFGGFPKA VDNFIDIMKSE EMSMVEELSCFLVLQIKQRSEGIFISQEKHVKNIVKKFGLDQSQHKRTPA+THVKITKDINGTTVDHKCIGA
Subjt: NIEFGGFPKAHVDNFIDIMKSEFEMSMVEELSCFLVLQIKQRSEGIFISQEKHVKNIVKKFGLDQSQHKRTPAMTHVKITKDINGTTVDHKCIGA
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| KAA0035705.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 1.6e-76 | 79.06 | Show/hide |
Query: MSCIRKFKLYQMDVKSALQNGYLNEEVYVAQPKGFVDYEFPQHVYKLNKALYVLKQAPKAWYERLTIYLGNKEYSRGGTDKILFTNRTNSDLIVAQIYVD
+S RKFKLYQMD+KSA NGYLNEEVYVAQPKGF+D EFPQ+VYKLNKALY LKQAP+AWYE LT+YLG K YS+G TDK LF N+TN DLIVAQIYVD
Subjt: MSCIRKFKLYQMDVKSALQNGYLNEEVYVAQPKGFVDYEFPQHVYKLNKALYVLKQAPKAWYERLTIYLGNKEYSRGGTDKILFTNRTNSDLIVAQIYVD
Query: NIEFGGFPKAHVDNFIDIMKSEFEMSMVEELSCFLVLQIKQRSEGIFISQEKHVKNIVKKFGLDQSQHKRTPAMTHVKITKDINGTTVDHK
+I FGGFPK V+NFIDI+KSEFEMS+V ELS FL LQIKQRSEGIFISQEK+ KNIVKKF LDQSQ KRTPA TH KITKD GT VDHK
Subjt: NIEFGGFPKAHVDNFIDIMKSEFEMSMVEELSCFLVLQIKQRSEGIFISQEKHVKNIVKKFGLDQSQHKRTPAMTHVKITKDINGTTVDHK
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| KAA0035790.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 9.9e-79 | 80.63 | Show/hide |
Query: MSCIRKFKLYQMDVKSALQNGYLNEEVYVAQPKGFVDYEFPQHVYKLNKALYVLKQAPKAWYERLTIYLGNKEYSRGGTDKILFTNRTNSDLIVAQIYVD
+SCI KFKLYQMDVKSA NGYLNEEV+VAQPKGFVD EFP HVYKLNKALY LKQAP+AWYERLTIYLG+K YSR GT K LF NRT+S+LI+AQIYVD
Subjt: MSCIRKFKLYQMDVKSALQNGYLNEEVYVAQPKGFVDYEFPQHVYKLNKALYVLKQAPKAWYERLTIYLGNKEYSRGGTDKILFTNRTNSDLIVAQIYVD
Query: NIEFGGFPKAHVDNFIDIMKSEFEMSMVEELSCFLVLQIKQRSEGIFISQEKHVKNIVKKFGLDQSQHKRTPAMTHVKITKDINGTTVDHK
+I FG FPKA + NFI+IMKSEFEMSMV ELSCFL LQIKQRS IFISQEK+VKN+VKKFGLDQ QHKRT THVK+TKDINGT VDHK
Subjt: NIEFGGFPKAHVDNFIDIMKSEFEMSMVEELSCFLVLQIKQRSEGIFISQEKHVKNIVKKFGLDQSQHKRTPAMTHVKITKDINGTTVDHK
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| KAA0054435.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 2.4e-80 | 80.1 | Show/hide |
Query: MSCIRKFKLYQMDVKSALQNGYLNEEVYVAQPKGFVDYEFPQHVYKLNKALYVLKQAPKAWYERLTIYLGNKEYSRGGTDKILFTNRTNSDLIVAQIYVD
+SC RKFKL+QM VKSA NGYLNEEVYV QPKGFVD EFPQ+VYKLNKALY LKQAP+AWYERLT+YLG + YSRG TDK LF NRT+++LIVAQIYVD
Subjt: MSCIRKFKLYQMDVKSALQNGYLNEEVYVAQPKGFVDYEFPQHVYKLNKALYVLKQAPKAWYERLTIYLGNKEYSRGGTDKILFTNRTNSDLIVAQIYVD
Query: NIEFGGFPKAHVDNFIDIMKSEFEMSMVEELSCFLVLQIKQRSEGIFISQEKHVKNIVKKFGLDQSQHKRTPAMTHVKITKDINGTTVDHK
+I FGGFPK VDNFI+IMKSEFEMS+V ELSCFL LQIKQRSEG+FISQEK+ KN+VKKFGLDQSQHKRTPA+TH KITKD+ GT VDHK
Subjt: NIEFGGFPKAHVDNFIDIMKSEFEMSMVEELSCFLVLQIKQRSEGIFISQEKHVKNIVKKFGLDQSQHKRTPAMTHVKITKDINGTTVDHK
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| TYK29824.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 4.0e-80 | 81.15 | Show/hide |
Query: MSCIRKFKLYQMDVKSALQNGYLNEEVYVAQPKGFVDYEFPQHVYKLNKALYVLKQAPKAWYERLTIYLGNKEYSRGGTDKILFTNRTNSDLIVAQIYVD
+SCI KFKLYQMDVKSA NGYLNEEV+VAQPKGFVD EFPQHVYKLNKALY LKQAP+AWY+RLTIYLG+K YSR GT K LF NRT+S+LI+AQIYVD
Subjt: MSCIRKFKLYQMDVKSALQNGYLNEEVYVAQPKGFVDYEFPQHVYKLNKALYVLKQAPKAWYERLTIYLGNKEYSRGGTDKILFTNRTNSDLIVAQIYVD
Query: NIEFGGFPKAHVDNFIDIMKSEFEMSMVEELSCFLVLQIKQRSEGIFISQEKHVKNIVKKFGLDQSQHKRTPAMTHVKITKDINGTTVDHK
+I FGGFPKA + NFI+IMKSEFEMSMV ELSCFL LQIKQRS IFISQEK+VKN+VKKFGLDQ QHKRT THVK+TKDINGT VDHK
Subjt: NIEFGGFPKAHVDNFIDIMKSEFEMSMVEELSCFLVLQIKQRSEGIFISQEKHVKNIVKKFGLDQSQHKRTPAMTHVKITKDINGTTVDHK
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A5A7SXM5 Putative gag-pol polyprotein | 4.8e-79 | 80.63 | Show/hide |
Query: MSCIRKFKLYQMDVKSALQNGYLNEEVYVAQPKGFVDYEFPQHVYKLNKALYVLKQAPKAWYERLTIYLGNKEYSRGGTDKILFTNRTNSDLIVAQIYVD
+SCI KFKLYQMDVKSA NGYLNEEV+VAQPKGFVD EFP HVYKLNKALY LKQAP+AWYERLTIYLG+K YSR GT K LF NRT+S+LI+AQIYVD
Subjt: MSCIRKFKLYQMDVKSALQNGYLNEEVYVAQPKGFVDYEFPQHVYKLNKALYVLKQAPKAWYERLTIYLGNKEYSRGGTDKILFTNRTNSDLIVAQIYVD
Query: NIEFGGFPKAHVDNFIDIMKSEFEMSMVEELSCFLVLQIKQRSEGIFISQEKHVKNIVKKFGLDQSQHKRTPAMTHVKITKDINGTTVDHK
+I FG FPKA + NFI+IMKSEFEMSMV ELSCFL LQIKQRS IFISQEK+VKN+VKKFGLDQ QHKRT THVK+TKDINGT VDHK
Subjt: NIEFGGFPKAHVDNFIDIMKSEFEMSMVEELSCFLVLQIKQRSEGIFISQEKHVKNIVKKFGLDQSQHKRTPAMTHVKITKDINGTTVDHK
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| A0A5A7T2M1 Gag-pol polyprotein | 7.7e-77 | 79.06 | Show/hide |
Query: MSCIRKFKLYQMDVKSALQNGYLNEEVYVAQPKGFVDYEFPQHVYKLNKALYVLKQAPKAWYERLTIYLGNKEYSRGGTDKILFTNRTNSDLIVAQIYVD
+S RKFKLYQMD+KSA NGYLNEEVYVAQPKGF+D EFPQ+VYKLNKALY LKQAP+AWYE LT+YLG K YS+G TDK LF N+TN DLIVAQIYVD
Subjt: MSCIRKFKLYQMDVKSALQNGYLNEEVYVAQPKGFVDYEFPQHVYKLNKALYVLKQAPKAWYERLTIYLGNKEYSRGGTDKILFTNRTNSDLIVAQIYVD
Query: NIEFGGFPKAHVDNFIDIMKSEFEMSMVEELSCFLVLQIKQRSEGIFISQEKHVKNIVKKFGLDQSQHKRTPAMTHVKITKDINGTTVDHK
+I FGGFPK V+NFIDI+KSEFEMS+V ELS FL LQIKQRSEGIFISQEK+ KNIVKKF LDQSQ KRTPA TH KITKD GT VDHK
Subjt: NIEFGGFPKAHVDNFIDIMKSEFEMSMVEELSCFLVLQIKQRSEGIFISQEKHVKNIVKKFGLDQSQHKRTPAMTHVKITKDINGTTVDHK
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| A0A5D3CDX9 Gag-pol polyprotein | 3.1e-102 | 96.41 | Show/hide |
Query: MSCIRKFKLYQMDVKSALQNGYLNEEVYVAQPKGFVDYEFPQHVYKLNKALYVLKQAPKAWYERLTIYLGNKEYSRGGTDKILFTNRTNSDLIVAQIYVD
+SCIRKFKLYQM+VKSALQNGYLNEEVYVAQPKGFVDYEFPQHVYKLNKALYVLKQAP+AWYE LTIYLGNKEYSRGGTDKILFTNRTNSDLIVAQIYVD
Subjt: MSCIRKFKLYQMDVKSALQNGYLNEEVYVAQPKGFVDYEFPQHVYKLNKALYVLKQAPKAWYERLTIYLGNKEYSRGGTDKILFTNRTNSDLIVAQIYVD
Query: NIEFGGFPKAHVDNFIDIMKSEFEMSMVEELSCFLVLQIKQRSEGIFISQEKHVKNIVKKFGLDQSQHKRTPAMTHVKITKDINGTTVDHKCIGA
NIEFGGFPKA VDNFIDIMKSE EMSMVEELSCFLVLQIKQRSEGIFISQEKHVKNIVKKFGLDQSQHKRTPA+THVKITKDINGTTVDHKCIGA
Subjt: NIEFGGFPKAHVDNFIDIMKSEFEMSMVEELSCFLVLQIKQRSEGIFISQEKHVKNIVKKFGLDQSQHKRTPAMTHVKITKDINGTTVDHKCIGA
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| A0A5D3CS19 Gag-pol polyprotein | 1.1e-80 | 80.1 | Show/hide |
Query: MSCIRKFKLYQMDVKSALQNGYLNEEVYVAQPKGFVDYEFPQHVYKLNKALYVLKQAPKAWYERLTIYLGNKEYSRGGTDKILFTNRTNSDLIVAQIYVD
+SC RKFKL+QM VKSA NGYLNEEVYV QPKGFVD EFPQ+VYKLNKALY LKQAP+AWYERLT+YLG + YSRG TDK LF NRT+++LIVAQIYVD
Subjt: MSCIRKFKLYQMDVKSALQNGYLNEEVYVAQPKGFVDYEFPQHVYKLNKALYVLKQAPKAWYERLTIYLGNKEYSRGGTDKILFTNRTNSDLIVAQIYVD
Query: NIEFGGFPKAHVDNFIDIMKSEFEMSMVEELSCFLVLQIKQRSEGIFISQEKHVKNIVKKFGLDQSQHKRTPAMTHVKITKDINGTTVDHK
+I FGGFPK VDNFI+IMKSEFEMS+V ELSCFL LQIKQRSEG+FISQEK+ KN+VKKFGLDQSQHKRTPA+TH KITKD+ GT VDHK
Subjt: NIEFGGFPKAHVDNFIDIMKSEFEMSMVEELSCFLVLQIKQRSEGIFISQEKHVKNIVKKFGLDQSQHKRTPAMTHVKITKDINGTTVDHK
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| A0A5D3E1T0 Putative gag-pol polyprotein | 1.9e-80 | 81.15 | Show/hide |
Query: MSCIRKFKLYQMDVKSALQNGYLNEEVYVAQPKGFVDYEFPQHVYKLNKALYVLKQAPKAWYERLTIYLGNKEYSRGGTDKILFTNRTNSDLIVAQIYVD
+SCI KFKLYQMDVKSA NGYLNEEV+VAQPKGFVD EFPQHVYKLNKALY LKQAP+AWY+RLTIYLG+K YSR GT K LF NRT+S+LI+AQIYVD
Subjt: MSCIRKFKLYQMDVKSALQNGYLNEEVYVAQPKGFVDYEFPQHVYKLNKALYVLKQAPKAWYERLTIYLGNKEYSRGGTDKILFTNRTNSDLIVAQIYVD
Query: NIEFGGFPKAHVDNFIDIMKSEFEMSMVEELSCFLVLQIKQRSEGIFISQEKHVKNIVKKFGLDQSQHKRTPAMTHVKITKDINGTTVDHK
+I FGGFPKA + NFI+IMKSEFEMSMV ELSCFL LQIKQRS IFISQEK+VKN+VKKFGLDQ QHKRT THVK+TKDINGT VDHK
Subjt: NIEFGGFPKAHVDNFIDIMKSEFEMSMVEELSCFLVLQIKQRSEGIFISQEKHVKNIVKKFGLDQSQHKRTPAMTHVKITKDINGTTVDHK
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 7.8e-18 | 32.74 | Show/hide |
Query: KLYQMDVKSALQNGYLNEEVYVAQPKGFVDYEFPQHVYKLNKALYVLKQAPKAWYERLTIYLGNKEYSRGGTDK---ILFTNRTNSDLIVAQIYVDNIEF
K++QMDVK+A NG L EE+Y+ P+G +V KLNKA+Y LKQA + W+E L E+ D+ IL N ++ V +YVD++
Subjt: KLYQMDVKSALQNGYLNEEVYVAQPKGFVDYEFPQHVYKLNKALYVLKQAPKAWYERLTIYLGNKEYSRGGTDK---ILFTNRTNSDLIVAQIYVDNIEF
Query: GGFPKAHVDNFIDIMKSEFEMSMVEELSCFLVLQIKQRSEGIFISQEKHVKNIVKKFGLDQSQHKRTP
++NF + +F M+ + E+ F+ ++I+ + + I++SQ +VK I+ KF ++ TP
Subjt: GGFPKAHVDNFIDIMKSEFEMSMVEELSCFLVLQIKQRSEGIFISQEKHVKNIVKKFGLDQSQHKRTP
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.7e-20 | 30.43 | Show/hide |
Query: QMDVKSALQNGYLNEEVYVAQPKGFVDYEFPQHVYKLNKALYVLKQAPKAWYERLTIYLGNKEYSRGGTDKILFTNR-TNSDLIVAQIYVDNIEFGGFPK
Q+DVK+A +G L EE+Y+ QP+GF V KLNK+LY LKQAP+ WY + ++ ++ Y + +D ++ R + ++ I+ +YVD++ G K
Subjt: QMDVKSALQNGYLNEEVYVAQPKGFVDYEFPQHVYKLNKALYVLKQAPKAWYERLTIYLGNKEYSRGGTDKILFTNR-TNSDLIVAQIYVDNIEFGGFPK
Query: AHVDNFIDIMKSEFEMSMVEELSCFLVLQI--KQRSEGIFISQEKHVKNIVKKFGLDQSQHKRTPAMTHVKITKDINGTTVDHK
+ + F+M + L ++I ++ S +++SQEK+++ ++++F + ++ TP H+K++K + TTV+ K
Subjt: AHVDNFIDIMKSEFEMSMVEELSCFLVLQI--KQRSEGIFISQEKHVKNIVKKFGLDQSQHKRTPAMTHVKITKDINGTTVDHK
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| P25600 Putative transposon Ty5-1 protein YCL074W | 4.6e-10 | 27.78 | Show/hide |
Query: MDVKSALQNGYLNEEVYVAQPKGFVDYEFPQHVYKLNKALYVLKQAPKAWYERLTIYLGNKEYSRGGTDKILFTNRTNSDLIVAQIYVDNIEFGGFPKAH
MDV +A N ++E +YV QP GFV+ P +V++L +Y LKQAP W E + L + R + L+ T+ I +YVD++
Subjt: MDVKSALQNGYLNEEVYVAQPKGFVDYEFPQHVYKLNKALYVLKQAPKAWYERLTIYLGNKEYSRGGTDKILFTNRTNSDLIVAQIYVDNIEFGGFPKAH
Query: VDNFIDIMKSEFEMSMVEELSCFLVLQIKQRSEG-IFISQEKHVKNIVKKFGLDQSQHKRTP
D + + M + ++ FL L I Q S G I +S + ++ + ++ + +TP
Subjt: VDNFIDIMKSEFEMSMVEELSCFLVLQIKQRSEG-IFISQEKHVKNIVKKFGLDQSQHKRTP
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.5e-21 | 31.82 | Show/hide |
Query: RKFKLYQMDVKSALQNGYLNEEVYVAQPKGFVDYEFPQHVYKLNKALYVLKQAPKAWYERLTIYLGNKEYSRGGTDKILFTNRTNSDLIVAQIYVDNIEF
R + + Q+DV +A G L ++VY++QP GF+D + P +V KL KALY LKQAP+AWY L YL + +D LF + ++ +YVD+I
Subjt: RKFKLYQMDVKSALQNGYLNEEVYVAQPKGFVDYEFPQHVYKLNKALYVLKQAPKAWYERLTIYLGNKEYSRGGTDKILFTNRTNSDLIVAQIYVDNIEF
Query: GGFPKAHVDNFIDIMKSEFEMSMVEELSCFLVLQIKQRSEGIFISQEKHVKNIVKKFGLDQSQHKRTPAMTHVKIT
G + N +D + F + EEL FL ++ K+ G+ +SQ +++ +++ + + ++ TP K++
Subjt: GGFPKAHVDNFIDIMKSEFEMSMVEELSCFLVLQIKQRSEGIFISQEKHVKNIVKKFGLDQSQHKRTPAMTHVKIT
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 4.0e-22 | 32.39 | Show/hide |
Query: RKFKLYQMDVKSALQNGYLNEEVYVAQPKGFVDYEFPQHVYKLNKALYVLKQAPKAWYERLTIYLGNKEYSRGGTDKILFTNRTNSDLIVAQIYVDNIEF
R + + Q+DV +A G L +EVY++QP GFVD + P +V +L KA+Y LKQAP+AWY L YL + +D LF + +I +YVD+I
Subjt: RKFKLYQMDVKSALQNGYLNEEVYVAQPKGFVDYEFPQHVYKLNKALYVLKQAPKAWYERLTIYLGNKEYSRGGTDKILFTNRTNSDLIVAQIYVDNIEF
Query: GGFPKAHVDNFIDIMKSEFEMSMVEELSCFLVLQIKQRSEGIFISQEKHVKNIVKKFGLDQSQHKRTPAMTHVKIT
G + + +D + F + E+L FL ++ K+ +G+ +SQ ++ +++ + + ++ TP T K+T
Subjt: GGFPKAHVDNFIDIMKSEFEMSMVEELSCFLVLQIKQRSEGIFISQEKHVKNIVKKFGLDQSQHKRTPAMTHVKIT
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