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Cmc07g0187561 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc07g0187561
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationCMiso1.1chr07:5621585..5621992
RNA-Seq ExpressionCmc07g0187561
SyntenyCmc07g0187561
Gene Ontology termsGO:0016310 - phosphorylation (biological process)
GO:0016020 - membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0016301 - kinase activity (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031744753.1 uncharacterized protein LOC101212255 isoform X1 [Cucumis sativus]4.3e-5790.08Show/hide
Query:  MMPNQQLVKEEKLCKDHERYRRLVGKLNYLTVTRPDIAYSVSMVSQFMSSPTVDHWAAVEQILCYLKDAPGRGILYKNHGHTRVECFSDVDWARSLEDRR
        MMPNQQLVKE +LCKD ERYRRLVGKLNYLTVTRPDIAYSVS+VSQFMSSPTVDHWAAVEQILCYLK APGRGILYK+HGHTRVECFSD DWA S EDRR
Subjt:  MMPNQQLVKEEKLCKDHERYRRLVGKLNYLTVTRPDIAYSVSMVSQFMSSPTVDHWAAVEQILCYLKDAPGRGILYKNHGHTRVECFSDVDWARSLEDRR

Query:  STFGYCVFVGGNLVSWKSKNK
        ST GYCVFVGGNLVSWKSK +
Subjt:  STFGYCVFVGGNLVSWKSKNK

XP_031744754.1 uncharacterized protein LOC101212255 isoform X2 [Cucumis sativus]4.3e-5790.08Show/hide
Query:  MMPNQQLVKEEKLCKDHERYRRLVGKLNYLTVTRPDIAYSVSMVSQFMSSPTVDHWAAVEQILCYLKDAPGRGILYKNHGHTRVECFSDVDWARSLEDRR
        MMPNQQLVKE +LCKD ERYRRLVGKLNYLTVTRPDIAYSVS+VSQFMSSPTVDHWAAVEQILCYLK APGRGILYK+HGHTRVECFSD DWA S EDRR
Subjt:  MMPNQQLVKEEKLCKDHERYRRLVGKLNYLTVTRPDIAYSVSMVSQFMSSPTVDHWAAVEQILCYLKDAPGRGILYKNHGHTRVECFSDVDWARSLEDRR

Query:  STFGYCVFVGGNLVSWKSKNK
        ST GYCVFVGGNLVSWKSK +
Subjt:  STFGYCVFVGGNLVSWKSKNK

XP_031744755.1 uncharacterized protein LOC101212255 isoform X3 [Cucumis sativus]4.3e-5790.08Show/hide
Query:  MMPNQQLVKEEKLCKDHERYRRLVGKLNYLTVTRPDIAYSVSMVSQFMSSPTVDHWAAVEQILCYLKDAPGRGILYKNHGHTRVECFSDVDWARSLEDRR
        MMPNQQLVKE +LCKD ERYRRLVGKLNYLTVTRPDIAYSVS+VSQFMSSPTVDHWAAVEQILCYLK APGRGILYK+HGHTRVECFSD DWA S EDRR
Subjt:  MMPNQQLVKEEKLCKDHERYRRLVGKLNYLTVTRPDIAYSVSMVSQFMSSPTVDHWAAVEQILCYLKDAPGRGILYKNHGHTRVECFSDVDWARSLEDRR

Query:  STFGYCVFVGGNLVSWKSKNK
        ST GYCVFVGGNLVSWKSK +
Subjt:  STFGYCVFVGGNLVSWKSKNK

XP_031744756.1 uncharacterized protein LOC101212255 isoform X4 [Cucumis sativus]4.3e-5790.08Show/hide
Query:  MMPNQQLVKEEKLCKDHERYRRLVGKLNYLTVTRPDIAYSVSMVSQFMSSPTVDHWAAVEQILCYLKDAPGRGILYKNHGHTRVECFSDVDWARSLEDRR
        MMPNQQLVKE +LCKD ERYRRLVGKLNYLTVTRPDIAYSVS+VSQFMSSPTVDHWAAVEQILCYLK APGRGILYK+HGHTRVECFSD DWA S EDRR
Subjt:  MMPNQQLVKEEKLCKDHERYRRLVGKLNYLTVTRPDIAYSVSMVSQFMSSPTVDHWAAVEQILCYLKDAPGRGILYKNHGHTRVECFSDVDWARSLEDRR

Query:  STFGYCVFVGGNLVSWKSKNK
        ST GYCVFVGGNLVSWKSK +
Subjt:  STFGYCVFVGGNLVSWKSKNK

XP_031744758.1 uncharacterized protein LOC101212255 isoform X5 [Cucumis sativus]4.3e-5790.08Show/hide
Query:  MMPNQQLVKEEKLCKDHERYRRLVGKLNYLTVTRPDIAYSVSMVSQFMSSPTVDHWAAVEQILCYLKDAPGRGILYKNHGHTRVECFSDVDWARSLEDRR
        MMPNQQLVKE +LCKD ERYRRLVGKLNYLTVTRPDIAYSVS+VSQFMSSPTVDHWAAVEQILCYLK APGRGILYK+HGHTRVECFSD DWA S EDRR
Subjt:  MMPNQQLVKEEKLCKDHERYRRLVGKLNYLTVTRPDIAYSVSMVSQFMSSPTVDHWAAVEQILCYLKDAPGRGILYKNHGHTRVECFSDVDWARSLEDRR

Query:  STFGYCVFVGGNLVSWKSKNK
        ST GYCVFVGGNLVSWKSK +
Subjt:  STFGYCVFVGGNLVSWKSKNK

TrEMBL top hitse value%identityAlignment
A0A5A7SQ84 Putative mitochondrial protein3.7e-5485.95Show/hide
Query:  MMPNQQLVKEEKLCKDHERYRRLVGKLNYLTVTRPDIAYSVSMVSQFMSSPTVDHWAAVEQILCYLKDAPGRGILYKNHGHTRVECFSDVDWARSLEDRR
        MM NQ LVKE KLCKD ERYRRLVGKLNYLT+TRPDIAY VS+VSQFMSSPTVDHWAAVEQILCY K APGRGILYK+HGHTRVECFSD DWA S EDRR
Subjt:  MMPNQQLVKEEKLCKDHERYRRLVGKLNYLTVTRPDIAYSVSMVSQFMSSPTVDHWAAVEQILCYLKDAPGRGILYKNHGHTRVECFSDVDWARSLEDRR

Query:  STFGYCVFVGGNLVSWKSKNK
        ST GYCVFVGG LVSWKSK +
Subjt:  STFGYCVFVGGNLVSWKSKNK

A0A5A7TEN9 Putative mitochondrial protein5.7e-5586.78Show/hide
Query:  MMPNQQLVKEEKLCKDHERYRRLVGKLNYLTVTRPDIAYSVSMVSQFMSSPTVDHWAAVEQILCYLKDAPGRGILYKNHGHTRVECFSDVDWARSLEDRR
        MMPNQQLVKE KLCKD ERYRRLVGKLNYLT+T+PDIAYSVS+VSQFMSSPTVDHWAAVEQILCYLK APGRGILYK+HGHTRVECFSD DWA S ED R
Subjt:  MMPNQQLVKEEKLCKDHERYRRLVGKLNYLTVTRPDIAYSVSMVSQFMSSPTVDHWAAVEQILCYLKDAPGRGILYKNHGHTRVECFSDVDWARSLEDRR

Query:  STFGYCVFVGGNLVSWKSKNK
        S+  YCVFVGGNLVSWKSK +
Subjt:  STFGYCVFVGGNLVSWKSKNK

A0A5D3C204 Putative mitochondrial protein5.7e-5586.78Show/hide
Query:  MMPNQQLVKEEKLCKDHERYRRLVGKLNYLTVTRPDIAYSVSMVSQFMSSPTVDHWAAVEQILCYLKDAPGRGILYKNHGHTRVECFSDVDWARSLEDRR
        MMPNQQLVKE KLCKD ERYRRLVGKLNYLT+T+PDIAYSVS+VSQFMSSPTVDHWAAVEQILCYLK APGRGILYK+HGHTRVECFSD DWA S ED  
Subjt:  MMPNQQLVKEEKLCKDHERYRRLVGKLNYLTVTRPDIAYSVSMVSQFMSSPTVDHWAAVEQILCYLKDAPGRGILYKNHGHTRVECFSDVDWARSLEDRR

Query:  STFGYCVFVGGNLVSWKSKNK
        S+ GYCVFVGGNLVSWKSK +
Subjt:  STFGYCVFVGGNLVSWKSKNK

A0A5D3CGG6 Putative Polyprotein5.2e-5697.25Show/hide
Query:  MMPNQQLVKEEKLCKDHERYRRLVGKLNYLTVTRPDIAYSVSMVSQFMSSPTVDHWAAVEQILCYLKDAPGRGILYKNHGHTRVECFSDVDWARSLEDRR
        MMPNQQLVKEEKLCKDHERYRRLVGKLNYLTVTRPDIAYSVS+VSQFMSSPTVDHWAAVEQILCYLKDAPG  ILYKNHGHTRVECFSDVDWARSLEDRR
Subjt:  MMPNQQLVKEEKLCKDHERYRRLVGKLNYLTVTRPDIAYSVSMVSQFMSSPTVDHWAAVEQILCYLKDAPGRGILYKNHGHTRVECFSDVDWARSLEDRR

Query:  STFGYCVFV
        STFGYCVFV
Subjt:  STFGYCVFV

A0A5D3CID2 Putative mitochondrial protein1.1e-5588.43Show/hide
Query:  MMPNQQLVKEEKLCKDHERYRRLVGKLNYLTVTRPDIAYSVSMVSQFMSSPTVDHWAAVEQILCYLKDAPGRGILYKNHGHTRVECFSDVDWARSLEDRR
        MMPNQQLVKE KLCKD ERYRRLVGKLNYLTVTRPDIAYSVS+VSQFMS PTVDHWA VEQILCYLK APG GIL K+HGHTRVECFSD DWA S EDRR
Subjt:  MMPNQQLVKEEKLCKDHERYRRLVGKLNYLTVTRPDIAYSVSMVSQFMSSPTVDHWAAVEQILCYLKDAPGRGILYKNHGHTRVECFSDVDWARSLEDRR

Query:  STFGYCVFVGGNLVSWKSKNK
        STFGYCVFVGGNLVSWKSK +
Subjt:  STFGYCVFVGGNLVSWKSKNK

SwissProt top hitse value%identityAlignment
P0CV72 Secreted RxLR effector protein 1611.6e-1741.75Show/hide
Query:  YRRLVGKLNYL-TVTRPDIAYSVSMVSQFMSSPTVDHWAAVEQILCYLKDAPGRGILYKNHGHTRVECFSDVDWARSLEDRRSTFGYCVFVGGNLVSWKS
        Y   VG + YL  VTRPD+A +V ++SQF S P   HW A++++L YL+     G+ +   G  ++  +SD DWA  +E RRST GY   + G  VSW+S
Subjt:  YRRLVGKLNYL-TVTRPDIAYSVSMVSQFMSSPTVDHWAAVEQILCYLKDAPGRGILYKNHGHTRVECFSDVDWARSLEDRRSTFGYCVFVGGNLVSWKS

Query:  KNK
        K +
Subjt:  KNK

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-946.8e-1337.62Show/hide
Query:  YRRLVGKLNYLTV-TRPDIAYSVSMVSQFMSSPTVDHWAAVEQILCYLKDAPGRGILYKNHGHTRVECFSDVDWARSLEDRRSTFGYCVFVGGNLVSWKS
        Y   VG L Y  V TRPDIA++V +VS+F+ +P  +HW AV+ IL YL+   G  + +       ++ ++D D A  +++R+S+ GY     G  +SW+S
Subjt:  YRRLVGKLNYLTV-TRPDIAYSVSMVSQFMSSPTVDHWAAVEQILCYLKDAPGRGILYKNHGHTRVECFSDVDWARSLEDRRSTFGYCVFVGGNLVSWKS

Query:  K
        K
Subjt:  K

P92519 Uncharacterized mitochondrial protein AtMg008104.9e-1939.62Show/hide
Query:  DHERYRRLVGKLNYLTVTRPDIAYSVSMVSQFMSSPTVDHWAAVEQILCYLKDAPGRGILYKNHGHTRVECFSDVDWARSLEDRRSTFGYCVFVGGNLVS
        D   +R +VG L YLT+TRPDI+Y+V++V Q M  PT+  +  ++++L Y+K     G+    +    V+ F D DWA     RRST G+C F+G N++S
Subjt:  DHERYRRLVGKLNYLTVTRPDIAYSVSMVSQFMSSPTVDHWAAVEQILCYLKDAPGRGILYKNHGHTRVECFSDVDWARSLEDRRSTFGYCVFVGGNLVS

Query:  WKSKNK
        W +K +
Subjt:  WKSKNK

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.5e-2042.86Show/hide
Query:  PNQQLVKEEKLCKDHERYRRLVGKLNYLTVTRPDIAYSVSMVSQFMSSPTVDHWAAVEQILCYLKDAPGRGILYKNHGHTRVECFSDVDWARSLEDRRST
        P   L    KL  D   YR +VG L YL  TRPDI+Y+V+ +SQFM  PT +H  A+++IL YL   P  GI  K      +  +SD DWA   +D  ST
Subjt:  PNQQLVKEEKLCKDHERYRRLVGKLNYLTVTRPDIAYSVSMVSQFMSSPTVDHWAAVEQILCYLKDAPGRGILYKNHGHTRVECFSDVDWARSLEDRRST

Query:  FGYCVFVGGNLVSWKSKNK
         GY V++G + +SW SK +
Subjt:  FGYCVFVGGNLVSWKSKNK

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE28.0e-2243.4Show/hide
Query:  DHERYRRLVGKLNYLTVTRPDIAYSVSMVSQFMSSPTVDHWAAVEQILCYLKDAPGRGILYKNHGHTRVECFSDVDWARSLEDRRSTFGYCVFVGGNLVS
        D   YR +VG L YL  TRPD++Y+V+ +SQ+M  PT DHW A++++L YL   P  GI  K      +  +SD DWA   +D  ST GY V++G + +S
Subjt:  DHERYRRLVGKLNYLTVTRPDIAYSVSMVSQFMSSPTVDHWAAVEQILCYLKDAPGRGILYKNHGHTRVECFSDVDWARSLEDRRSTFGYCVFVGGNLVS

Query:  WKSKNK
        W SK +
Subjt:  WKSKNK

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 83.3e-2342.59Show/hide
Query:  DHERYRRLVGKLNYLTVTRPDIAYSVSMVSQFMSSPTVDHWAAVEQILCYLKDAPGRGILYKNHGHTRVECFSDVDWARSLEDRRSTFGYCVFVGGNLVS
        D + YRRL+G+L YL +TR DI+++V+ +SQF  +P + H  AV +IL Y+K   G+G+ Y +    +++ FSD  +    + RRST GYC+F+G +L+S
Subjt:  DHERYRRLVGKLNYLTVTRPDIAYSVSMVSQFMSSPTVDHWAAVEQILCYLKDAPGRGILYKNHGHTRVECFSDVDWARSLEDRRSTFGYCVFVGGNLVS

Query:  WKSKNKML
        WKSK + +
Subjt:  WKSKNKML

ATMG00240.1 Gag-Pol-related retrotransposon family protein4.1e-1338.27Show/hide
Query:  YLTVTRPDIAYSVSMVSQFMSSPTVDHWAAVEQILCYLKDAPGRGILYKNHGHTRVECFSDVDWARSLEDRRSTFGYCVFV
        YLT+TRPD+ ++V+ +SQF S+       AV ++L Y+K   G+G+ Y      +++ F+D DWA   + RRS  G+C  V
Subjt:  YLTVTRPDIAYSVSMVSQFMSSPTVDHWAAVEQILCYLKDAPGRGILYKNHGHTRVECFSDVDWARSLEDRRSTFGYCVFV

ATMG00810.1 DNA/RNA polymerases superfamily protein3.5e-2039.62Show/hide
Query:  DHERYRRLVGKLNYLTVTRPDIAYSVSMVSQFMSSPTVDHWAAVEQILCYLKDAPGRGILYKNHGHTRVECFSDVDWARSLEDRRSTFGYCVFVGGNLVS
        D   +R +VG L YLT+TRPDI+Y+V++V Q M  PT+  +  ++++L Y+K     G+    +    V+ F D DWA     RRST G+C F+G N++S
Subjt:  DHERYRRLVGKLNYLTVTRPDIAYSVSMVSQFMSSPTVDHWAAVEQILCYLKDAPGRGILYKNHGHTRVECFSDVDWARSLEDRRSTFGYCVFVGGNLVS

Query:  WKSKNK
        W +K +
Subjt:  WKSKNK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCCGAATCAGCAACTTGTTAAAGAAGAAAAATTATGTAAAGATCATGAGAGATATAGGAGATTAGTTGGGAAGTTGAACTACTTAACAGTGACTCGACCAGACAT
TGCTTATTCTGTAAGTATGGTAAGTCAGTTCATGTCTTCCCCTACAGTGGATCATTGGGCTGCAGTAGAGCAGATTCTATGTTATTTGAAAGATGCTCCTGGACGTGGGA
TCTTATACAAAAATCATGGACATACAAGAGTTGAATGTTTTTCTGATGTTGATTGGGCGAGATCTCTAGAGGATAGGAGATCAACCTTTGGATATTGTGTCTTTGTAGGT
GGAAACTTGGTATCATGGAAGAGTAAAAACAAAATGTTGTTTCTCGTTCGAGTGCTGAGTCAGAATATAGAGCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGATGCCGAATCAGCAACTTGTTAAAGAAGAAAAATTATGTAAAGATCATGAGAGATATAGGAGATTAGTTGGGAAGTTGAACTACTTAACAGTGACTCGACCAGACAT
TGCTTATTCTGTAAGTATGGTAAGTCAGTTCATGTCTTCCCCTACAGTGGATCATTGGGCTGCAGTAGAGCAGATTCTATGTTATTTGAAAGATGCTCCTGGACGTGGGA
TCTTATACAAAAATCATGGACATACAAGAGTTGAATGTTTTTCTGATGTTGATTGGGCGAGATCTCTAGAGGATAGGAGATCAACCTTTGGATATTGTGTCTTTGTAGGT
GGAAACTTGGTATCATGGAAGAGTAAAAACAAAATGTTGTTTCTCGTTCGAGTGCTGAGTCAGAATATAGAGCTATGA
Protein sequenceShow/hide protein sequence
MMPNQQLVKEEKLCKDHERYRRLVGKLNYLTVTRPDIAYSVSMVSQFMSSPTVDHWAAVEQILCYLKDAPGRGILYKNHGHTRVECFSDVDWARSLEDRRSTFGYCVFVG
GNLVSWKSKNKMLFLVRVLSQNIEL