; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc07g0187841 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc07g0187841
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationCMiso1.1chr07:5903047..5904555
RNA-Seq ExpressionCmc07g0187841
SyntenyCmc07g0187841
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0016779 - nucleotidyltransferase activity (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN81099.1 hypothetical protein VITISV_017741 [Vitis vinifera]5.2e-15653.59Show/hide
Query:  MEEEFEALQKNDTWRLTPQNPNQKIVGCKWVFKIKRNSYGPISRYKARLVAKGFHQTPNIDYNETFSPVVKSVTICMLLTIAIMKGWSIRQLDVNNAFLH
        M  E++ALQ+N+TW L P    ++ +GCKWV+K K N  G + +YKARLVAKGFHQ    D+ ETFSPVVK  T+ ++ TIA+ + W+I+QLDVNNAFL+
Subjt:  MEEEFEALQKNDTWRLTPQNPNQKIVGCKWVFKIKRNSYGPISRYKARLVAKGFHQTPNIDYNETFSPVVKSVTICMLLTIAIMKGWSIRQLDVNNAFLH

Query:  GNLDENVYMEQIFGFEVKSSYPMVCHLKKAIYGLKQAPRAWYENLSSGLHSLGFRTSKADTSLLIRVTLTSCCYALIYVDDLIIMGSSKKDVYSLVHSLN
        G+L E V+M+Q  GF  + +  +VC L KA+YGLKQAPRAW+E L   L S GF ++K+D SL +R T     Y L+YVDD++++GS    + SL+  LN
Subjt:  GNLDENVYMEQIFGFEVKSSYPMVCHLKKAIYGLKQAPRAWYENLSSGLHSLGFRTSKADTSLLIRVTLTSCCYALIYVDDLIIMGSSKKDVYSLVHSLN

Query:  SQFALKDLGKLSYFLGVEVSYPTNGGLFLSQSKYITDLLQRTKMLDAKPISIPMVSGPLLSAFQGEPFHDVHLLRSVVGALQYATLTHPEISYSVNKACQ
        S+F+LKDLG++ YFLG++VS+ TN GL LSQ+KYI DLLQ+TKM+  KP   P+ +G  L    G+P  D+H  RS VGALQY T+T PE+S+SVNK CQ
Subjt:  SQFALKDLGKLSYFLGVEVSYPTNGGLFLSQSKYITDLLQRTKMLDAKPISIPMVSGPLLSAFQGEPFHDVHLLRSVVGALQYATLTHPEISYSVNKACQ

Query:  FMHTPKHTLWQLVKRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLCVYFGNNLVSWGSKKQSIISRSSTEAEYRCLALLATEMVWI
        FM  P    W++VKRILRYL+G L HGL L KS N  L+GF DADWASD DDR+STSG CV+ G NL+SW SKKQ I+SRSS E EYR LA L  E+ W+
Subjt:  FMHTPKHTLWQLVKRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLCVYFGNNLVSWGSKKQSIISRSSTEAEYRCLALLATEMVWI

Query:  RSLLNDLYIDLPFPPILCCDNLSAVHFSANPILHSKTKHVELDIYFVRDLIRKEKLFVRHLPATEQIADILTKPLSAQSFHKLKNNLTVIDSAVIGLQGV
        RSLL++L + L  PP++ CDNLS V  SANP+LH++TKH+ELD+YFVR+ + ++++ VRH+P+ +Q+AD+LTK +S+  F + ++ L + + + + L+G 
Subjt:  RSLLNDLYIDLPFPPILCCDNLSAVHFSANPILHSKTKHVELDIYFVRDLIRKEKLFVRHLPATEQIADILTKPLSAQSFHKLKNNLTVIDSAVIGLQGV

Query:  LR
        +R
Subjt:  LR

KAA0052371.1 putative mitochondrial protein [Cucumis melo var. makuwa]4.8e-28798.01Show/hide
Query:  MEEEFEALQKNDTWRLTPQNPNQKIVGCKWVFKIKRNSYGPISRYKARLVAKGFHQTPNIDYNETFSPVVKSVTICMLLTIAIMKGWSIRQLDVNNAFLH
        MEEEFEALQKNDTWRLTPQNPNQKIVGCKWVFKIKRNSYGPI+RYKARLVAKGFHQTPNIDYNETFSPVVKS+TICMLLTIAIMKGWSIRQLDVNNAFLH
Subjt:  MEEEFEALQKNDTWRLTPQNPNQKIVGCKWVFKIKRNSYGPISRYKARLVAKGFHQTPNIDYNETFSPVVKSVTICMLLTIAIMKGWSIRQLDVNNAFLH

Query:  GNLDENVYMEQIFGFEVKSSYPMVCHLKKAIYGLKQAPRAWYENLSSGLHSLGFRTSKADTSLLIRVTLTSCCYALIYVDDLIIMGSSKKDVYSLVHSLN
        GNLDENVYMEQIFGFEVKSSYPMVCHLKKA+YGLKQAPRAWYENLS GLHSLGFRTSKADTSLLIRVT TSCCYALIYVDDLIIMGSSKKDV SLVHSLN
Subjt:  GNLDENVYMEQIFGFEVKSSYPMVCHLKKAIYGLKQAPRAWYENLSSGLHSLGFRTSKADTSLLIRVTLTSCCYALIYVDDLIIMGSSKKDVYSLVHSLN

Query:  SQFALKDLGKLSYFLGVEVSYPTNGGLFLSQSKYITDLLQRTKMLDAKPISIPMVSGPLLSAFQGEPFHDVHLLRSVVGALQYATLTHPEISYSVNKACQ
        SQFALKDLGKLSYFLGVEVSYPTNG LFLSQSKYITDLLQRTKMLDAKPIS PMVSGPLLSAFQGEPFHDVHLLRSVVGALQYATLTHPEISYSVNKACQ
Subjt:  SQFALKDLGKLSYFLGVEVSYPTNGGLFLSQSKYITDLLQRTKMLDAKPISIPMVSGPLLSAFQGEPFHDVHLLRSVVGALQYATLTHPEISYSVNKACQ

Query:  FMHTPKHTLWQLVKRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLCVYFGNNLVSWGSKKQSIISRSSTEAEYRCLALLATEMVWI
        FMHTPKHT WQLVKRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLCVYFGNNLVSWGSKKQSIISRSSTEAEYRCLALLATEMVWI
Subjt:  FMHTPKHTLWQLVKRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLCVYFGNNLVSWGSKKQSIISRSSTEAEYRCLALLATEMVWI

Query:  RSLLNDLYIDLPFPPILCCDNLSAVHFSANPILHSKTKHVELDIYFVRDLIRKEKLFVRHLPATEQIADILTKPLSAQSFHKLKNNLTVIDSAVIGLQGV
        RSLLNDLYIDLPFPPILCCDNLSAVHFSANPILHSKTKHVELDIYFVRDLIRKEKLFVRHLPATEQIADILTKPLSAQSFHKLKNN+TVIDSAVIGLQGV
Subjt:  RSLLNDLYIDLPFPPILCCDNLSAVHFSANPILHSKTKHVELDIYFVRDLIRKEKLFVRHLPATEQIADILTKPLSAQSFHKLKNNLTVIDSAVIGLQGV

Query:  LR
        LR
Subjt:  LR

RVX14937.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]1.0e-15653.98Show/hide
Query:  MEEEFEALQKNDTWRLTPQNPNQKIVGCKWVFKIKRNSYGPISRYKARLVAKGFHQTPNIDYNETFSPVVKSVTICMLLTIAIMKGWSIRQLDVNNAFLH
        M  E++ALQ+N+TW L P    ++ +GCKWV+K K N  G + +YKARLVAKGFHQ    D+ ETFSPVVK  TI ++ TIA+ + W+I+QLDVNNAFL+
Subjt:  MEEEFEALQKNDTWRLTPQNPNQKIVGCKWVFKIKRNSYGPISRYKARLVAKGFHQTPNIDYNETFSPVVKSVTICMLLTIAIMKGWSIRQLDVNNAFLH

Query:  GNLDENVYMEQIFGFEVKSSYPMVCHLKKAIYGLKQAPRAWYENLSSGLHSLGFRTSKADTSLLIRVTLTSCCYALIYVDDLIIMGSSKKDVYSLVHSLN
        G+L E V+M+Q  GF  + +  +VC L KA+YGLKQAPRAW+E L   L S GF ++K+D SL +R T +   Y L+YVDD++++GS    + SL+  LN
Subjt:  GNLDENVYMEQIFGFEVKSSYPMVCHLKKAIYGLKQAPRAWYENLSSGLHSLGFRTSKADTSLLIRVTLTSCCYALIYVDDLIIMGSSKKDVYSLVHSLN

Query:  SQFALKDLGKLSYFLGVEVSYPTNGGLFLSQSKYITDLLQRTKMLDAKPISIPMVSGPLLSAFQGEPFHDVHLLRSVVGALQYATLTHPEISYSVNKACQ
        S+F+LKDLG++ YFLG++VS+ TN GL LSQ+KYI DLLQ+TKM+  KP   P+ +G  L A  G+P  D+H  RS VGALQY T+T PE+S+SVNK CQ
Subjt:  SQFALKDLGKLSYFLGVEVSYPTNGGLFLSQSKYITDLLQRTKMLDAKPISIPMVSGPLLSAFQGEPFHDVHLLRSVVGALQYATLTHPEISYSVNKACQ

Query:  FMHTPKHTLWQLVKRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLCVYFGNNLVSWGSKKQSIISRSSTEAEYRCLALLATEMVWI
        FM  P    W+ VKRILRYL+G L HGL L KS N  L+GF DADWASD DDR+STSG CV+ G NL+SW SKKQ  +SRSSTEAEYR LA L  E+ W+
Subjt:  FMHTPKHTLWQLVKRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLCVYFGNNLVSWGSKKQSIISRSSTEAEYRCLALLATEMVWI

Query:  RSLLNDLYIDLPFPPILCCDNLSAVHFSANPILHSKTKHVELDIYFVRDLIRKEKLFVRHLPATEQIADILTKPLSAQSFHKLKNNLTVIDSAVIGLQGV
        RSLL++L + L  PP++ CDNLS V  SANP+LH++TKH+ELD+YFV + + ++++ VRH+P+ +Q+AD+LTK +S+  F + ++ L + + + + L+G 
Subjt:  RSLLNDLYIDLPFPPILCCDNLSAVHFSANPILHSKTKHVELDIYFVRDLIRKEKLFVRHLPATEQIADILTKPLSAQSFHKLKNNLTVIDSAVIGLQGV

Query:  LR
        +R
Subjt:  LR

XP_016903397.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]3.3e-15889.62Show/hide
Query:  MGSSKKDVYSLVHSLNSQFALKDLGKLSYFLGVEVSYPTNGGLFLSQSKYITDLLQRTKMLDAKPISIPMVSGPLLSAFQGEPFHDVHLLRSVVGALQYA
        MG+SKK V SLVHSLNSQFALKDLGKLSYFL VEVSYPTNGGLFLSQSKYITDLLQRTKMLDAKPIS  MVSGPLLSAFQGE FHDVHL RS+VGALQYA
Subjt:  MGSSKKDVYSLVHSLNSQFALKDLGKLSYFLGVEVSYPTNGGLFLSQSKYITDLLQRTKMLDAKPISIPMVSGPLLSAFQGEPFHDVHLLRSVVGALQYA

Query:  TLTHPEISYSVNKACQFMHTPKHTLWQLVKRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLCVYFGNNLVSWGSKKQSIISRSSTE
        TLTHPEISYSVNKACQF+HTPKHT WQLVK+ILRYLKGVLYH LWLSKSDN SL GF DADWASDPDDRKSTSG CVYFGNNLVSWGSKKQSII RSST+
Subjt:  TLTHPEISYSVNKACQFMHTPKHTLWQLVKRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLCVYFGNNLVSWGSKKQSIISRSSTE

Query:  AEYRCLALLATEMVWIRSLLNDLYIDLPFPPILCCDNLSAVHFSANPILHSKTKHVELDIYFVRDLIRKEKLFVRHLPATEQIADILTKPLSAQSFHKLK
        AEYRCL LLATE+VWIRSLLNDLYIDLPFPPIL CDNLSAVH SAN ILHS TKHVELDIYFVRDLI+K KLF+RHL ATEQIADILTKPLSAQS HKLK
Subjt:  AEYRCLALLATEMVWIRSLLNDLYIDLPFPPILCCDNLSAVHFSANPILHSKTKHVELDIYFVRDLIRKEKLFVRHLPATEQIADILTKPLSAQSFHKLK

Query:  NNLTVIDSAVIGLQGVLR
        N LTV+DSA IGLQGVLR
Subjt:  NNLTVIDSAVIGLQGVLR

XP_019080407.1 PREDICTED: uncharacterized protein LOC109123862 [Vitis vinifera]5.2e-15653.59Show/hide
Query:  MEEEFEALQKNDTWRLTPQNPNQKIVGCKWVFKIKRNSYGPISRYKARLVAKGFHQTPNIDYNETFSPVVKSVTICMLLTIAIMKGWSIRQLDVNNAFLH
        M  E++ALQ+N+TW L P    ++ +GCKWV+K K N  G + +YKARLVAKGFHQ    D+ ETFSPVVK  T+ ++ TIA+ + W+I+QLDVNNAFL+
Subjt:  MEEEFEALQKNDTWRLTPQNPNQKIVGCKWVFKIKRNSYGPISRYKARLVAKGFHQTPNIDYNETFSPVVKSVTICMLLTIAIMKGWSIRQLDVNNAFLH

Query:  GNLDENVYMEQIFGFEVKSSYPMVCHLKKAIYGLKQAPRAWYENLSSGLHSLGFRTSKADTSLLIRVTLTSCCYALIYVDDLIIMGSSKKDVYSLVHSLN
        G+L E V+M+Q  GF  + +  +VC L KA+YGLKQAPRAW+E L   L S GF ++K+D SL +R T     Y L+YVDD++++GS    + SL+  LN
Subjt:  GNLDENVYMEQIFGFEVKSSYPMVCHLKKAIYGLKQAPRAWYENLSSGLHSLGFRTSKADTSLLIRVTLTSCCYALIYVDDLIIMGSSKKDVYSLVHSLN

Query:  SQFALKDLGKLSYFLGVEVSYPTNGGLFLSQSKYITDLLQRTKMLDAKPISIPMVSGPLLSAFQGEPFHDVHLLRSVVGALQYATLTHPEISYSVNKACQ
        S+F+LKDLG++ YFLG++VS+ TN GL LSQ+KYI DLLQ+TKM+  KP   P+ +G  L    G+P  D+H  RS VGALQY T+T PE+S+SVNK CQ
Subjt:  SQFALKDLGKLSYFLGVEVSYPTNGGLFLSQSKYITDLLQRTKMLDAKPISIPMVSGPLLSAFQGEPFHDVHLLRSVVGALQYATLTHPEISYSVNKACQ

Query:  FMHTPKHTLWQLVKRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLCVYFGNNLVSWGSKKQSIISRSSTEAEYRCLALLATEMVWI
        FM  P    W++VKRILRYL+G L HGL L KS N  L+GF DADWASD DDR+STSG CV+ G NL+SW SKKQ I+SRSS E EYR LA L  E+ W+
Subjt:  FMHTPKHTLWQLVKRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLCVYFGNNLVSWGSKKQSIISRSSTEAEYRCLALLATEMVWI

Query:  RSLLNDLYIDLPFPPILCCDNLSAVHFSANPILHSKTKHVELDIYFVRDLIRKEKLFVRHLPATEQIADILTKPLSAQSFHKLKNNLTVIDSAVIGLQGV
        RSLL++L + L  PP++ CDNLS V  SANP+LH++TKH+ELD+YFVR+ + ++++ VRH+P+ +Q+AD+LTK +S+  F + ++ L + + + + L+G 
Subjt:  RSLLNDLYIDLPFPPILCCDNLSAVHFSANPILHSKTKHVELDIYFVRDLIRKEKLFVRHLPATEQIADILTKPLSAQSFHKLKNNLTVIDSAVIGLQGV

Query:  LR
        +R
Subjt:  LR

TrEMBL top hitse value%identityAlignment
A0A1S4E598 uncharacterized mitochondrial protein AtMg00810-like1.6e-15889.62Show/hide
Query:  MGSSKKDVYSLVHSLNSQFALKDLGKLSYFLGVEVSYPTNGGLFLSQSKYITDLLQRTKMLDAKPISIPMVSGPLLSAFQGEPFHDVHLLRSVVGALQYA
        MG+SKK V SLVHSLNSQFALKDLGKLSYFL VEVSYPTNGGLFLSQSKYITDLLQRTKMLDAKPIS  MVSGPLLSAFQGE FHDVHL RS+VGALQYA
Subjt:  MGSSKKDVYSLVHSLNSQFALKDLGKLSYFLGVEVSYPTNGGLFLSQSKYITDLLQRTKMLDAKPISIPMVSGPLLSAFQGEPFHDVHLLRSVVGALQYA

Query:  TLTHPEISYSVNKACQFMHTPKHTLWQLVKRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLCVYFGNNLVSWGSKKQSIISRSSTE
        TLTHPEISYSVNKACQF+HTPKHT WQLVK+ILRYLKGVLYH LWLSKSDN SL GF DADWASDPDDRKSTSG CVYFGNNLVSWGSKKQSII RSST+
Subjt:  TLTHPEISYSVNKACQFMHTPKHTLWQLVKRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLCVYFGNNLVSWGSKKQSIISRSSTE

Query:  AEYRCLALLATEMVWIRSLLNDLYIDLPFPPILCCDNLSAVHFSANPILHSKTKHVELDIYFVRDLIRKEKLFVRHLPATEQIADILTKPLSAQSFHKLK
        AEYRCL LLATE+VWIRSLLNDLYIDLPFPPIL CDNLSAVH SAN ILHS TKHVELDIYFVRDLI+K KLF+RHL ATEQIADILTKPLSAQS HKLK
Subjt:  AEYRCLALLATEMVWIRSLLNDLYIDLPFPPILCCDNLSAVHFSANPILHSKTKHVELDIYFVRDLIRKEKLFVRHLPATEQIADILTKPLSAQSFHKLK

Query:  NNLTVIDSAVIGLQGVLR
        N LTV+DSA IGLQGVLR
Subjt:  NNLTVIDSAVIGLQGVLR

A0A438K147 Retrovirus-related Pol polyprotein from transposon TNT 1-945.1e-15753.98Show/hide
Query:  MEEEFEALQKNDTWRLTPQNPNQKIVGCKWVFKIKRNSYGPISRYKARLVAKGFHQTPNIDYNETFSPVVKSVTICMLLTIAIMKGWSIRQLDVNNAFLH
        M  E++ALQ+N+TW L P    ++ +GCKWV+K K N  G + +YKARLVAKGFHQ    D+ ETFSPVVK  TI ++ TIA+ + W+I+QLDVNNAFL+
Subjt:  MEEEFEALQKNDTWRLTPQNPNQKIVGCKWVFKIKRNSYGPISRYKARLVAKGFHQTPNIDYNETFSPVVKSVTICMLLTIAIMKGWSIRQLDVNNAFLH

Query:  GNLDENVYMEQIFGFEVKSSYPMVCHLKKAIYGLKQAPRAWYENLSSGLHSLGFRTSKADTSLLIRVTLTSCCYALIYVDDLIIMGSSKKDVYSLVHSLN
        G+L E V+M+Q  GF  + +  +VC L KA+YGLKQAPRAW+E L   L S GF ++K+D SL +R T +   Y L+YVDD++++GS    + SL+  LN
Subjt:  GNLDENVYMEQIFGFEVKSSYPMVCHLKKAIYGLKQAPRAWYENLSSGLHSLGFRTSKADTSLLIRVTLTSCCYALIYVDDLIIMGSSKKDVYSLVHSLN

Query:  SQFALKDLGKLSYFLGVEVSYPTNGGLFLSQSKYITDLLQRTKMLDAKPISIPMVSGPLLSAFQGEPFHDVHLLRSVVGALQYATLTHPEISYSVNKACQ
        S+F+LKDLG++ YFLG++VS+ TN GL LSQ+KYI DLLQ+TKM+  KP   P+ +G  L A  G+P  D+H  RS VGALQY T+T PE+S+SVNK CQ
Subjt:  SQFALKDLGKLSYFLGVEVSYPTNGGLFLSQSKYITDLLQRTKMLDAKPISIPMVSGPLLSAFQGEPFHDVHLLRSVVGALQYATLTHPEISYSVNKACQ

Query:  FMHTPKHTLWQLVKRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLCVYFGNNLVSWGSKKQSIISRSSTEAEYRCLALLATEMVWI
        FM  P    W+ VKRILRYL+G L HGL L KS N  L+GF DADWASD DDR+STSG CV+ G NL+SW SKKQ  +SRSSTEAEYR LA L  E+ W+
Subjt:  FMHTPKHTLWQLVKRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLCVYFGNNLVSWGSKKQSIISRSSTEAEYRCLALLATEMVWI

Query:  RSLLNDLYIDLPFPPILCCDNLSAVHFSANPILHSKTKHVELDIYFVRDLIRKEKLFVRHLPATEQIADILTKPLSAQSFHKLKNNLTVIDSAVIGLQGV
        RSLL++L + L  PP++ CDNLS V  SANP+LH++TKH+ELD+YFV + + ++++ VRH+P+ +Q+AD+LTK +S+  F + ++ L + + + + L+G 
Subjt:  RSLLNDLYIDLPFPPILCCDNLSAVHFSANPILHSKTKHVELDIYFVRDLIRKEKLFVRHLPATEQIADILTKPLSAQSFHKLKNNLTVIDSAVIGLQGV

Query:  LR
        +R
Subjt:  LR

A0A5A7UFS3 Putative mitochondrial protein2.3e-28798.01Show/hide
Query:  MEEEFEALQKNDTWRLTPQNPNQKIVGCKWVFKIKRNSYGPISRYKARLVAKGFHQTPNIDYNETFSPVVKSVTICMLLTIAIMKGWSIRQLDVNNAFLH
        MEEEFEALQKNDTWRLTPQNPNQKIVGCKWVFKIKRNSYGPI+RYKARLVAKGFHQTPNIDYNETFSPVVKS+TICMLLTIAIMKGWSIRQLDVNNAFLH
Subjt:  MEEEFEALQKNDTWRLTPQNPNQKIVGCKWVFKIKRNSYGPISRYKARLVAKGFHQTPNIDYNETFSPVVKSVTICMLLTIAIMKGWSIRQLDVNNAFLH

Query:  GNLDENVYMEQIFGFEVKSSYPMVCHLKKAIYGLKQAPRAWYENLSSGLHSLGFRTSKADTSLLIRVTLTSCCYALIYVDDLIIMGSSKKDVYSLVHSLN
        GNLDENVYMEQIFGFEVKSSYPMVCHLKKA+YGLKQAPRAWYENLS GLHSLGFRTSKADTSLLIRVT TSCCYALIYVDDLIIMGSSKKDV SLVHSLN
Subjt:  GNLDENVYMEQIFGFEVKSSYPMVCHLKKAIYGLKQAPRAWYENLSSGLHSLGFRTSKADTSLLIRVTLTSCCYALIYVDDLIIMGSSKKDVYSLVHSLN

Query:  SQFALKDLGKLSYFLGVEVSYPTNGGLFLSQSKYITDLLQRTKMLDAKPISIPMVSGPLLSAFQGEPFHDVHLLRSVVGALQYATLTHPEISYSVNKACQ
        SQFALKDLGKLSYFLGVEVSYPTNG LFLSQSKYITDLLQRTKMLDAKPIS PMVSGPLLSAFQGEPFHDVHLLRSVVGALQYATLTHPEISYSVNKACQ
Subjt:  SQFALKDLGKLSYFLGVEVSYPTNGGLFLSQSKYITDLLQRTKMLDAKPISIPMVSGPLLSAFQGEPFHDVHLLRSVVGALQYATLTHPEISYSVNKACQ

Query:  FMHTPKHTLWQLVKRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLCVYFGNNLVSWGSKKQSIISRSSTEAEYRCLALLATEMVWI
        FMHTPKHT WQLVKRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLCVYFGNNLVSWGSKKQSIISRSSTEAEYRCLALLATEMVWI
Subjt:  FMHTPKHTLWQLVKRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLCVYFGNNLVSWGSKKQSIISRSSTEAEYRCLALLATEMVWI

Query:  RSLLNDLYIDLPFPPILCCDNLSAVHFSANPILHSKTKHVELDIYFVRDLIRKEKLFVRHLPATEQIADILTKPLSAQSFHKLKNNLTVIDSAVIGLQGV
        RSLLNDLYIDLPFPPILCCDNLSAVHFSANPILHSKTKHVELDIYFVRDLIRKEKLFVRHLPATEQIADILTKPLSAQSFHKLKNN+TVIDSAVIGLQGV
Subjt:  RSLLNDLYIDLPFPPILCCDNLSAVHFSANPILHSKTKHVELDIYFVRDLIRKEKLFVRHLPATEQIADILTKPLSAQSFHKLKNNLTVIDSAVIGLQGV

Query:  LR
        LR
Subjt:  LR

A5BFT3 Integrase catalytic domain-containing protein2.5e-15653.59Show/hide
Query:  MEEEFEALQKNDTWRLTPQNPNQKIVGCKWVFKIKRNSYGPISRYKARLVAKGFHQTPNIDYNETFSPVVKSVTICMLLTIAIMKGWSIRQLDVNNAFLH
        M  E++ALQ+N+TW L P    ++ +GCKWV+K K N  G + +YKARLVAKGFHQ    D+ ETFSPVVK  T+ ++ TIA+ + W+I+QLDVNNAFL+
Subjt:  MEEEFEALQKNDTWRLTPQNPNQKIVGCKWVFKIKRNSYGPISRYKARLVAKGFHQTPNIDYNETFSPVVKSVTICMLLTIAIMKGWSIRQLDVNNAFLH

Query:  GNLDENVYMEQIFGFEVKSSYPMVCHLKKAIYGLKQAPRAWYENLSSGLHSLGFRTSKADTSLLIRVTLTSCCYALIYVDDLIIMGSSKKDVYSLVHSLN
        G+L E V+M+Q  GF  + +  +VC L KA+YGLKQAPRAW+E L   L S GF ++K+D SL +R T     Y L+YVDD++++GS    + SL+  LN
Subjt:  GNLDENVYMEQIFGFEVKSSYPMVCHLKKAIYGLKQAPRAWYENLSSGLHSLGFRTSKADTSLLIRVTLTSCCYALIYVDDLIIMGSSKKDVYSLVHSLN

Query:  SQFALKDLGKLSYFLGVEVSYPTNGGLFLSQSKYITDLLQRTKMLDAKPISIPMVSGPLLSAFQGEPFHDVHLLRSVVGALQYATLTHPEISYSVNKACQ
        S+F+LKDLG++ YFLG++VS+ TN GL LSQ+KYI DLLQ+TKM+  KP   P+ +G  L    G+P  D+H  RS VGALQY T+T PE+S+SVNK CQ
Subjt:  SQFALKDLGKLSYFLGVEVSYPTNGGLFLSQSKYITDLLQRTKMLDAKPISIPMVSGPLLSAFQGEPFHDVHLLRSVVGALQYATLTHPEISYSVNKACQ

Query:  FMHTPKHTLWQLVKRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLCVYFGNNLVSWGSKKQSIISRSSTEAEYRCLALLATEMVWI
        FM  P    W++VKRILRYL+G L HGL L KS N  L+GF DADWASD DDR+STSG CV+ G NL+SW SKKQ I+SRSS E EYR LA L  E+ W+
Subjt:  FMHTPKHTLWQLVKRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLCVYFGNNLVSWGSKKQSIISRSSTEAEYRCLALLATEMVWI

Query:  RSLLNDLYIDLPFPPILCCDNLSAVHFSANPILHSKTKHVELDIYFVRDLIRKEKLFVRHLPATEQIADILTKPLSAQSFHKLKNNLTVIDSAVIGLQGV
        RSLL++L + L  PP++ CDNLS V  SANP+LH++TKH+ELD+YFVR+ + ++++ VRH+P+ +Q+AD+LTK +S+  F + ++ L + + + + L+G 
Subjt:  RSLLNDLYIDLPFPPILCCDNLSAVHFSANPILHSKTKHVELDIYFVRDLIRKEKLFVRHLPATEQIADILTKPLSAQSFHKLKNNLTVIDSAVIGLQGV

Query:  LR
        +R
Subjt:  LR

A5BMC8 Integrase catalytic domain-containing protein5.6e-15656.21Show/hide
Query:  MEEEFEALQKNDTWRLTPQNPNQKIVGCKWVFKIKRNSYGPISRYKARLVAKGFHQTPNIDYNETFSPVVKSVTICMLLTIAIMKGWSIRQLDVNNAFLH
        M+EEF AL KN TW L     N+  VGC+WVFK+KRN  G +SRYKARLVAKG+ Q P  D+ ETFSPVVK  TI ++L IA+ + W IRQLDVNNAFL+
Subjt:  MEEEFEALQKNDTWRLTPQNPNQKIVGCKWVFKIKRNSYGPISRYKARLVAKGFHQTPNIDYNETFSPVVKSVTICMLLTIAIMKGWSIRQLDVNNAFLH

Query:  GNLDENVYMEQIFGFEVKSS--YPMVCHLKKAIYGLKQAPRAWYENLSSGLHSLGFRTSKADTSLLIRVTLTSCCYALIYVDDLIIMGSSKKDVYSLVHS
        G L E VYM+Q  GF+ K++    +VC L KA+YGLKQAPRAW++ L   L   GF ++K+D SL +R T  S  + L+YVDD+++ GSS ++++ L+  
Subjt:  GNLDENVYMEQIFGFEVKSS--YPMVCHLKKAIYGLKQAPRAWYENLSSGLHSLGFRTSKADTSLLIRVTLTSCCYALIYVDDLIIMGSSKKDVYSLVHS

Query:  LNSQFALKDLGKLSYFLGVEVSYPTNGGLFLSQSKYITDLLQRTKMLDAKPISIPMVSGPLLSAFQGEPFHDVHLLRSVVGALQYATLTHPEISYSVNKA
        L   F+LKDLG+LSYFLG+EV    +GGL LSQ KYI DLL++TKM  AK +  PM+SG  LSA  G+P  +V   RSVVGALQY T+T PEI++SVNK 
Subjt:  LNSQFALKDLGKLSYFLGVEVSYPTNGGLFLSQSKYITDLLQRTKMLDAKPISIPMVSGPLLSAFQGEPFHDVHLLRSVVGALQYATLTHPEISYSVNKA

Query:  CQFMHTPKHTLWQLVKRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLCVYFGNNLVSWGSKKQSIISRSSTEAEYRCLALLATEMV
        CQFM  P  T W+ VKRILRYL G    G+ L  S+  +LVGF DADW SD DDR+STSG CV+ G +LVSW SKKQ   SRSSTEAEYR LA L +EM+
Subjt:  CQFMHTPKHTLWQLVKRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLCVYFGNNLVSWGSKKQSIISRSSTEAEYRCLALLATEMV

Query:  WIRSLLNDLYIDLPFPPILCCDNLSAVHFSANPILHSKTKHVELDIYFVRDLIRKEKLFVRHLPATEQIADILTKPLSAQSFHKLKNNLTV
        W++SLL++L   +   P++ CDN+S V  SANP+LHS+TKH+ELD+YFVR+ + + KL V H+P  +Q+AD+ TKPLS + F KL+  LTV
Subjt:  WIRSLLNDLYIDLPFPPILCCDNLSAVHFSANPILHSKTKHVELDIYFVRDLIRKEKLFVRHLPATEQIADILTKPLSAQSFHKLKNNLTV

SwissProt top hitse value%identityAlignment
P04146 Copia protein2.8e-8034.48Show/hide
Query:  EFEALQKNDTWRLTPQNPNQKIVGCKWVFKIKRNSYGPISRYKARLVAKGFHQTPNIDYNETFSPVVKSVTICMLLTIAIMKGWSIRQLDVNNAFLHGNL
        E  A + N+TW +T +  N+ IV  +WVF +K N  G   RYKARLVA+GF Q   IDY ETF+PV +  +   +L++ I     + Q+DV  AFL+G L
Subjt:  EFEALQKNDTWRLTPQNPNQKIVGCKWVFKIKRNSYGPISRYKARLVAKGFHQTPNIDYNETFSPVVKSVTICMLLTIAIMKGWSIRQLDVNNAFLHGNL

Query:  DENVYMEQIFGFEVKSSYPMVCHLKKAIYGLKQAPRAWYENLSSGLHSLGFRTSKADTSLLI--RVTLTSCCYALIYVDDLIIMGSSKKDVYSLVHSLNS
         E +YM    G    S    VC L KAIYGLKQA R W+E     L    F  S  D  + I  +  +    Y L+YVDD++I       + +    L  
Subjt:  DENVYMEQIFGFEVKSSYPMVCHLKKAIYGLKQAPRAWYENLSSGLHSLGFRTSKADTSLLI--RVTLTSCCYALIYVDDLIIMGSSKKDVYSLVHSLNS

Query:  QFALKDLGKLSYFLGVEVSYPTNGGLFLSQSKYITDLLQRTKMLDAKPISIPMVSGPLLSAFQGEPFHDVHLLRSVVGALQYATL-THPEISYSVNKACQ
        +F + DL ++ +F+G+ +    +  ++LSQS Y+  +L +  M +   +S P+ S         +   +    RS++G L Y  L T P+++ +VN   +
Subjt:  QFALKDLGKLSYFLGVEVSYPTNGGLFLSQSKYITDLLQRTKMLDAKPISIPMVSGPLLSAFQGEPFHDVHLLRSVVGALQYATL-THPEISYSVNKACQ

Query:  FMHTPKHTLWQLVKRILRYLKGVLYHGLWLSK--SDNTSLVGFADADWASDPDDRKSTSG-LCVYFGNNLVSWGSKKQSIISRSSTEAEYRCLALLATEM
        +       LWQ +KR+LRYLKG +   L   K  +    ++G+ D+DWA    DRKST+G L   F  NL+ W +K+Q+ ++ SSTEAEY  L     E 
Subjt:  FMHTPKHTLWQLVKRILRYLKGVLYHGLWLSK--SDNTSLVGFADADWASDPDDRKSTSG-LCVYFGNNLVSWGSKKQSIISRSSTEAEYRCLALLATEM

Query:  VWIRSLLNDLYIDLPFPPILCCDNLSAVHFSANPILHSKTKHVELDIYFVRDLIRKEKLFVRHLPATEQIADILTKPLSAQSFHKLKNNLTVI
        +W++ LL  + I L  P  +  DN   +  + NP  H + KH+++  +F R+ ++   + + ++P   Q+ADI TKPL A  F +L++ L ++
Subjt:  VWIRSLLNDLYIDLPFPPILCCDNLSAVHFSANPILHSKTKHVELDIYFVRDLIRKEKLFVRHLPATEQIADILTKPLSAQSFHKLKNNLTVI

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.4e-8738.34Show/hide
Query:  MEEEFEALQKNDTWRLTPQNPNQKIVGCKWVFKIKRNSYGPISRYKARLVAKGFHQTPNIDYNETFSPVVKSVTICMLLTIAIMKGWSIRQLDVNNAFLH
        M+EE E+LQKN T++L      ++ + CKWVFK+K++    + RYKARLV KGF Q   ID++E FSPVVK  +I  +L++A      + QLDV  AFLH
Subjt:  MEEEFEALQKNDTWRLTPQNPNQKIVGCKWVFKIKRNSYGPISRYKARLVAKGFHQTPNIDYNETFSPVVKSVTICMLLTIAIMKGWSIRQLDVNNAFLH

Query:  GNLDENVYMEQIFGFEVKSSYPMVCHLKKAIYGLKQAPRAWYENLSSGLHSLGFRTSKADTSLLI-RVTLTSCCYALIYVDDLIIMGSSKKDVYSLVHSL
        G+L+E +YMEQ  GFEV     MVC L K++YGLKQAPR WY    S + S  +  + +D  +   R +  +    L+YVDD++I+G  K  +  L   L
Subjt:  GNLDENVYMEQIFGFEVKSSYPMVCHLKKAIYGLKQAPRAWYENLSSGLHSLGFRTSKADTSLLI-RVTLTSCCYALIYVDDLIIMGSSKKDVYSLVHSL

Query:  NSQFALKDLGKLSYFLGVE-VSYPTNGGLFLSQSKYITDLLQRTKMLDAKPISIPMVSGPLLS------AFQGEPFHDVHLLRSVVGALQYATL-THPEI
        +  F +KDLG     LG++ V   T+  L+LSQ KYI  +L+R  M +AKP+S P+     LS        + +         S VG+L YA + T P+I
Subjt:  NSQFALKDLGKLSYFLGVE-VSYPTNGGLFLSQSKYITDLLQRTKMLDAKPISIPMVSGPLLS------AFQGEPFHDVHLLRSVVGALQYATL-THPEI

Query:  SYSVNKACQFMHTPKHTLWQLVKRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLCVYFGNNLVSWGSKKQSIISRSSTEAEYRCLA
        +++V    +F+  P    W+ VK ILRYL+G     L    SD   L G+ DAD A D D+RKS++G    F    +SW SK Q  ++ S+TEAEY    
Subjt:  SYSVNKACQFMHTPKHTLWQLVKRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLCVYFGNNLVSWGSKKQSIISRSSTEAEYRCLA

Query:  LLATEMVWIRSLLNDLYIDLPFPPILCCDNLSAVHFSANPILHSKTKHVELDIYFVRDLIRKEKLFVRHLPATEQIADILTKPLSAQSFHKLK
            EM+W++  L +L +      ++ CD+ SA+  S N + H++TKH+++  +++R+++  E L V  +   E  AD+LTK +    F   K
Subjt:  LLATEMVWIRSLLNDLYIDLPFPPILCCDNLSAVHFSANPILHSKTKHVELDIYFVRDLIRKEKLFVRHLPATEQIADILTKPLSAQSFHKLK

P92519 Uncharacterized mitochondrial protein AtMg008102.0e-5446.7Show/hide
Query:  YALIYVDDLIIMGSSKKDVYSLVHSLNSQFALKDLGKLSYFLGVEV-SYPTNGGLFLSQSKYITDLLQRTKMLDAKPISIPMVSGPLLSAFQGEPFHDVH
        Y L+YVDD+++ GSS   +  L+  L+S F++KDLG + YFLG+++ ++P+  GLFLSQ+KY   +L    MLD KP+S P+    L S+     + D  
Subjt:  YALIYVDDLIIMGSSKKDVYSLVHSLNSQFALKDLGKLSYFLGVEV-SYPTNGGLFLSQSKYITDLLQRTKMLDAKPISIPMVSGPLLSAFQGEPFHDVH

Query:  LLRSVVGALQYATLTHPEISYSVNKACQFMHTPKHTLWQLVKRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLCVYFGNNLVSWGS
          RS+VGALQY TLT P+ISY+VN  CQ MH P    + L+KR+LRY+KG ++HGL++ K+   ++  F D+DWA     R+ST+G C + G N++SW +
Subjt:  LLRSVVGALQYATLTHPEISYSVNKACQFMHTPKHTLWQLVKRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLCVYFGNNLVSWGS

Query:  KKQSIISRSSTEAEYRCLALLATEMVW
        K+Q  +SRSSTE EYR LAL A E+ W
Subjt:  KKQSIISRSSTEAEYRCLALLATEMVW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.8e-12748.27Show/hide
Query:  MEEEFEALQKNDTWRLTPQNPNQ-KIVGCKWVFKIKRNSYGPISRYKARLVAKGFHQTPNIDYNETFSPVVKSVTICMLLTIAIMKGWSIRQLDVNNAFL
        M  E  A   N TW L P  P+   IVGC+W+F  K NS G ++RYKARLVAKG++Q P +DY ETFSPV+KS +I ++L +A+ + W IRQLDVNNAFL
Subjt:  MEEEFEALQKNDTWRLTPQNPNQ-KIVGCKWVFKIKRNSYGPISRYKARLVAKGFHQTPNIDYNETFSPVVKSVTICMLLTIAIMKGWSIRQLDVNNAFL

Query:  HGNLDENVYMEQIFGFEVKSSYPMVCHLKKAIYGLKQAPRAWYENLSSGLHSLGFRTSKADTSLLIRVTLTSCCYALIYVDDLIIMGSSKKDVYSLVHSL
         G L ++VYM Q  GF  K     VC L+KA+YGLKQAPRAWY  L + L ++GF  S +DTSL +     S  Y L+YVDD++I G+    +++ + +L
Subjt:  HGNLDENVYMEQIFGFEVKSSYPMVCHLKKAIYGLKQAPRAWYENLSSGLHSLGFRTSKADTSLLIRVTLTSCCYALIYVDDLIIMGSSKKDVYSLVHSL

Query:  NSQFALKDLGKLSYFLGVEVS-YPTNGGLFLSQSKYITDLLQRTKMLDAKPISIPMVSGPLLSAFQGEPFHDVHLLRSVVGALQYATLTHPEISYSVNKA
        + +F++KD  +L YFLG+E    PT  GL LSQ +YI DLL RT M+ AKP++ PM   P LS + G    D    R +VG+LQY   T P+ISY+VN+ 
Subjt:  NSQFALKDLGKLSYFLGVEVS-YPTNGGLFLSQSKYITDLLQRTKMLDAKPISIPMVSGPLLSAFQGEPFHDVHLLRSVVGALQYATLTHPEISYSVNKA

Query:  CQFMHTPKHTLWQLVKRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLCVYFGNNLVSWGSKKQSIISRSSTEAEYRCLALLATEMV
         QFMH P     Q +KRILRYL G   HG++L K +  SL  ++DADWA D DD  ST+G  VY G++ +SW SKKQ  + RSSTEAEYR +A  ++EM 
Subjt:  CQFMHTPKHTLWQLVKRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLCVYFGNNLVSWGSKKQSIISRSSTEAEYRCLALLATEMV

Query:  WIRSLLNDLYIDLPFPPILCCDNLSAVHFSANPILHSKTKHVELDIYFVRDLIRKEKLFVRHLPATEQIADILTKPLSAQSFHKLKNNLTV
        WI SLL +L I L  PP++ CDN+ A +  ANP+ HS+ KH+ +D +F+R+ ++   L V H+   +Q+AD LTKPLS  +F    + + V
Subjt:  WIRSLLNDLYIDLPFPPILCCDNLSAVHFSANPILHSKTKHVELDIYFVRDLIRKEKLFVRHLPATEQIADILTKPLSAQSFHKLKNNLTV

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE22.9e-12547.25Show/hide
Query:  MEEEFEALQKNDTWRLT-PQNPNQKIVGCKWVFKIKRNSYGPISRYKARLVAKGFHQTPNIDYNETFSPVVKSVTICMLLTIAIMKGWSIRQLDVNNAFL
        M  E  A   N TW L  P  P+  IVGC+W+F  K NS G ++RYKARLVAKG++Q P +DY ETFSPV+KS +I ++L +A+ + W IRQLDVNNAFL
Subjt:  MEEEFEALQKNDTWRLT-PQNPNQKIVGCKWVFKIKRNSYGPISRYKARLVAKGFHQTPNIDYNETFSPVVKSVTICMLLTIAIMKGWSIRQLDVNNAFL

Query:  HGNLDENVYMEQIFGFEVKSSYPMVCHLKKAIYGLKQAPRAWYENLSSGLHSLGFRTSKADTSLLIRVTLTSCCYALIYVDDLIIMGSSKKDVYSLVHSL
         G L + VYM Q  GF  K     VC L+KAIYGLKQAPRAWY  L + L ++GF  S +DTSL +     S  Y L+YVDD++I G+    +   + +L
Subjt:  HGNLDENVYMEQIFGFEVKSSYPMVCHLKKAIYGLKQAPRAWYENLSSGLHSLGFRTSKADTSLLIRVTLTSCCYALIYVDDLIIMGSSKKDVYSLVHSL

Query:  NSQFALKDLGKLSYFLGVEVSYPTNGGLFLSQSKYITDLLQRTKMLDAKPISIPMVSGPLLSAFQGEPFHDVHLLRSVVGALQYATLTHPEISYSVNKAC
        + +F++K+   L YFLG+E       GL LSQ +Y  DLL RT ML AKP++ PM + P L+   G    D    R +VG+LQY   T P++SY+VN+  
Subjt:  NSQFALKDLGKLSYFLGVEVSYPTNGGLFLSQSKYITDLLQRTKMLDAKPISIPMVSGPLLSAFQGEPFHDVHLLRSVVGALQYATLTHPEISYSVNKAC

Query:  QFMHTPKHTLWQLVKRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLCVYFGNNLVSWGSKKQSIISRSSTEAEYRCLALLATEMVW
        Q+MH P    W  +KR+LRYL G   HG++L K +  SL  ++DADWA D DD  ST+G  VY G++ +SW SKKQ  + RSSTEAEYR +A  ++E+ W
Subjt:  QFMHTPKHTLWQLVKRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLCVYFGNNLVSWGSKKQSIISRSSTEAEYRCLALLATEMVW

Query:  IRSLLNDLYIDLPFPPILCCDNLSAVHFSANPILHSKTKHVELDIYFVRDLIRKEKLFVRHLPATEQIADILTKPLSAQSFHKLKNNLTVI
        I SLL +L I L  PP++ CDN+ A +  ANP+ HS+ KH+ LD +F+R+ ++   L V H+   +Q+AD LTKPLS  +F      + VI
Subjt:  IRSLLNDLYIDLPFPPILCCDNLSAVHFSANPILHSKTKHVELDIYFVRDLIRKEKLFVRHLPATEQIADILTKPLSAQSFHKLKNNLTVI

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 84.9e-10442.6Show/hide
Query:  MEEEFEALQKNDTWRLTPQNPNQKIVGCKWVFKIKRNSYGPISRYKARLVAKGFHQTPNIDYNETFSPVVKSVTICMLLTIAIMKGWSIRQLDVNNAFLH
        M++E  A++   TW +    PN+K +GCKWV+KIK NS G I RYKARLVAKG+ Q   ID+ ETFSPV K  ++ ++L I+ +  +++ QLD++NAFL+
Subjt:  MEEEFEALQKNDTWRLTPQNPNQKIVGCKWVFKIKRNSYGPISRYKARLVAKGFHQTPNIDYNETFSPVVKSVTICMLLTIAIMKGWSIRQLDVNNAFLH

Query:  GNLDENVYMEQIFGFEVK--SSYP--MVCHLKKAIYGLKQAPRAWYENLSSGLHSLGFRTSKADTSLLIRVTLTSCCYALIYVDDLIIMGSSKKDVYSLV
        G+LDE +YM+   G+  +   S P   VC+LKK+IYGLKQA R W+   S  L   GF  S +D +  +++T T     L+YVDD+II  ++   V  L 
Subjt:  GNLDENVYMEQIFGFEVK--SSYP--MVCHLKKAIYGLKQAPRAWYENLSSGLHSLGFRTSKADTSLLIRVTLTSCCYALIYVDDLIIMGSSKKDVYSLV

Query:  HSLNSQFALKDLGKLSYFLGVEVSYPTNGGLFLSQSKYITDLLQRTKMLDAKPISIPMVSGPLLSAFQGEPFHDVHLLRSVVGALQYATLTHPEISYSVN
          L S F L+DLG L YFLG+E++  +  G+ + Q KY  DLL  T +L  KP S+PM      SA  G  F D    R ++G L Y  +T  +IS++VN
Subjt:  HSLNSQFALKDLGKLSYFLGVEVSYPTNGGLFLSQSKYITDLLQRTKMLDAKPISIPMVSGPLLSAFQGEPFHDVHLLRSVVGALQYATLTHPEISYSVN

Query:  KACQFMHTPKHTLWQLVKRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLCVYFGNNLVSWGSKKQSIISRSSTEAEYRCLALLATE
        K  QF   P+    Q V +IL Y+KG +  GL+ S      L  F+DA + S  D R+ST+G C++ G +L+SW SKKQ ++S+SS EAEYR L+    E
Subjt:  KACQFMHTPKHTLWQLVKRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLCVYFGNNLVSWGSKKQSIISRSSTEAEYRCLALLATE

Query:  MVWIRSLLNDLYIDLPFPPILCCDNLSAVHFSANPILHSKTKHVELDIYFVRD
        M+W+     +L + L  P +L CDN +A+H + N + H +TKH+E D + VR+
Subjt:  MVWIRSLLNDLYIDLPFPPILCCDNLSAVHFSANPILHSKTKHVELDIYFVRD

ATMG00240.1 Gag-Pol-related retrotransposon family protein1.5e-1239.74Show/hide
Query:  YATLTHPEISYSVNKACQFMHTPKHTLWQLVKRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLC
        Y T+T P+++++VN+  QF    +    Q V ++L Y+KG +  GL+ S + +  L  FAD+DWAS PD R+S +G C
Subjt:  YATLTHPEISYSVNKACQFMHTPKHTLWQLVKRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLC

ATMG00810.1 DNA/RNA polymerases superfamily protein1.5e-5546.7Show/hide
Query:  YALIYVDDLIIMGSSKKDVYSLVHSLNSQFALKDLGKLSYFLGVEV-SYPTNGGLFLSQSKYITDLLQRTKMLDAKPISIPMVSGPLLSAFQGEPFHDVH
        Y L+YVDD+++ GSS   +  L+  L+S F++KDLG + YFLG+++ ++P+  GLFLSQ+KY   +L    MLD KP+S P+    L S+     + D  
Subjt:  YALIYVDDLIIMGSSKKDVYSLVHSLNSQFALKDLGKLSYFLGVEV-SYPTNGGLFLSQSKYITDLLQRTKMLDAKPISIPMVSGPLLSAFQGEPFHDVH

Query:  LLRSVVGALQYATLTHPEISYSVNKACQFMHTPKHTLWQLVKRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLCVYFGNNLVSWGS
          RS+VGALQY TLT P+ISY+VN  CQ MH P    + L+KR+LRY+KG ++HGL++ K+   ++  F D+DWA     R+ST+G C + G N++SW +
Subjt:  LLRSVVGALQYATLTHPEISYSVNKACQFMHTPKHTLWQLVKRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLCVYFGNNLVSWGS

Query:  KKQSIISRSSTEAEYRCLALLATEMVW
        K+Q  +SRSSTE EYR LAL A E+ W
Subjt:  KKQSIISRSSTEAEYRCLALLATEMVW

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)5.8e-2056.1Show/hide
Query:  MEEEFEALQKNDTWRLTPQNPNQKIVGCKWVFKIKRNSYGPISRYKARLVAKGFHQTPNIDYNETFSPVVKSVTICMLLTIA
        M+EE +AL +N TW L P   NQ I+GCKWVFK K +S G + R KARLVAKGFHQ   I + ET+SPVV++ TI  +L +A
Subjt:  MEEEFEALQKNDTWRLTPQNPNQKIVGCKWVFKIKRNSYGPISRYKARLVAKGFHQTPNIDYNETFSPVVKSVTICMLLTIA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAGAGTTTGAAGCCTTACAGAAAAATGACACCTGGAGACTTACTCCACAAAATCCTAATCAGAAAATTGTTGGTTGCAAATGGGTTTTTAAGATAAAAAGGAA
TTCATATGGGCCTATTTCTAGATATAAAGCACGCTTAGTTGCTAAAGGGTTTCATCAAACACCTAATATTGATTACAATGAAACATTTAGCCCTGTTGTGAAATCCGTTA
CTATTTGCATGCTATTAACTATAGCAATTATGAAAGGATGGAGTATACGTCAATTAGATGTTAATAATGCTTTTCTTCATGGAAATTTAGATGAAAATGTTTACATGGAA
CAAATATTTGGTTTTGAAGTTAAAAGCTCTTATCCTATGGTTTGTCATTTGAAAAAGGCTATTTATGGTCTTAAACAAGCCCCTCGAGCTTGGTATGAAAACTTGAGCTC
AGGTTTACATTCCCTTGGATTTAGAACTTCCAAGGCTGATACATCTTTATTAATACGTGTTACTCTTACATCTTGTTGCTATGCCTTGATTTATGTTGATGATTTGATTA
TTATGGGCAGCTCTAAGAAAGATGTGTATTCTTTAGTTCATTCTTTAAACAGTCAATTTGCACTTAAAGATTTGGGAAAGCTAAGCTACTTTCTTGGAGTTGAGGTGTCA
TACCCAACTAATGGAGGTTTGTTTTTATCTCAATCAAAGTATATTACTGATTTATTACAGAGAACAAAAATGTTGGATGCTAAACCTATCTCTATACCTATGGTAAGTGG
TCCTTTACTTTCTGCTTTTCAAGGGGAACCATTTCATGATGTGCATTTGCTTAGAAGTGTTGTTGGTGCATTACAGTATGCCACACTTACTCATCCTGAGATATCATATA
GTGTCAATAAAGCTTGTCAATTTATGCATACTCCAAAACATACACTCTGGCAGCTTGTGAAAAGAATTCTAAGATATCTTAAAGGTGTACTATATCATGGTTTATGGCTT
AGCAAGTCTGATAATACATCCTTAGTTGGTTTTGCTGATGCGGATTGGGCTTCTGATCCAGATGATAGAAAATCCACTTCTGGTTTATGTGTTTACTTTGGAAATAACTT
AGTATCTTGGGGTTCCAAGAAACAGTCTATTATTTCCAGGTCTAGTACTGAAGCTGAATATCGTTGCCTTGCTCTTTTGGCAACCGAAATGGTATGGATTCGTTCTCTCT
TGAATGACTTATACATTGATCTACCTTTTCCTCCTATTTTGTGTTGTGATAATCTAAGTGCAGTGCATTTTAGTGCAAATCCTATATTACATTCCAAGACAAAGCATGTT
GAACTTGACATCTATTTTGTTAGAGATCTTATACGAAAGGAAAAATTATTTGTTAGACATCTTCCAGCAACTGAACAAATTGCAGATATACTCACCAAACCATTGTCTGC
TCAAAGTTTCCACAAACTGAAGAATAATCTTACTGTCATTGATTCAGCAGTCATTGGTTTGCAGGGGGTGTTAAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAAGAGTTTGAAGCCTTACAGAAAAATGACACCTGGAGACTTACTCCACAAAATCCTAATCAGAAAATTGTTGGTTGCAAATGGGTTTTTAAGATAAAAAGGAA
TTCATATGGGCCTATTTCTAGATATAAAGCACGCTTAGTTGCTAAAGGGTTTCATCAAACACCTAATATTGATTACAATGAAACATTTAGCCCTGTTGTGAAATCCGTTA
CTATTTGCATGCTATTAACTATAGCAATTATGAAAGGATGGAGTATACGTCAATTAGATGTTAATAATGCTTTTCTTCATGGAAATTTAGATGAAAATGTTTACATGGAA
CAAATATTTGGTTTTGAAGTTAAAAGCTCTTATCCTATGGTTTGTCATTTGAAAAAGGCTATTTATGGTCTTAAACAAGCCCCTCGAGCTTGGTATGAAAACTTGAGCTC
AGGTTTACATTCCCTTGGATTTAGAACTTCCAAGGCTGATACATCTTTATTAATACGTGTTACTCTTACATCTTGTTGCTATGCCTTGATTTATGTTGATGATTTGATTA
TTATGGGCAGCTCTAAGAAAGATGTGTATTCTTTAGTTCATTCTTTAAACAGTCAATTTGCACTTAAAGATTTGGGAAAGCTAAGCTACTTTCTTGGAGTTGAGGTGTCA
TACCCAACTAATGGAGGTTTGTTTTTATCTCAATCAAAGTATATTACTGATTTATTACAGAGAACAAAAATGTTGGATGCTAAACCTATCTCTATACCTATGGTAAGTGG
TCCTTTACTTTCTGCTTTTCAAGGGGAACCATTTCATGATGTGCATTTGCTTAGAAGTGTTGTTGGTGCATTACAGTATGCCACACTTACTCATCCTGAGATATCATATA
GTGTCAATAAAGCTTGTCAATTTATGCATACTCCAAAACATACACTCTGGCAGCTTGTGAAAAGAATTCTAAGATATCTTAAAGGTGTACTATATCATGGTTTATGGCTT
AGCAAGTCTGATAATACATCCTTAGTTGGTTTTGCTGATGCGGATTGGGCTTCTGATCCAGATGATAGAAAATCCACTTCTGGTTTATGTGTTTACTTTGGAAATAACTT
AGTATCTTGGGGTTCCAAGAAACAGTCTATTATTTCCAGGTCTAGTACTGAAGCTGAATATCGTTGCCTTGCTCTTTTGGCAACCGAAATGGTATGGATTCGTTCTCTCT
TGAATGACTTATACATTGATCTACCTTTTCCTCCTATTTTGTGTTGTGATAATCTAAGTGCAGTGCATTTTAGTGCAAATCCTATATTACATTCCAAGACAAAGCATGTT
GAACTTGACATCTATTTTGTTAGAGATCTTATACGAAAGGAAAAATTATTTGTTAGACATCTTCCAGCAACTGAACAAATTGCAGATATACTCACCAAACCATTGTCTGC
TCAAAGTTTCCACAAACTGAAGAATAATCTTACTGTCATTGATTCAGCAGTCATTGGTTTGCAGGGGGTGTTAAGATAG
Protein sequenceShow/hide protein sequence
MEEEFEALQKNDTWRLTPQNPNQKIVGCKWVFKIKRNSYGPISRYKARLVAKGFHQTPNIDYNETFSPVVKSVTICMLLTIAIMKGWSIRQLDVNNAFLHGNLDENVYME
QIFGFEVKSSYPMVCHLKKAIYGLKQAPRAWYENLSSGLHSLGFRTSKADTSLLIRVTLTSCCYALIYVDDLIIMGSSKKDVYSLVHSLNSQFALKDLGKLSYFLGVEVS
YPTNGGLFLSQSKYITDLLQRTKMLDAKPISIPMVSGPLLSAFQGEPFHDVHLLRSVVGALQYATLTHPEISYSVNKACQFMHTPKHTLWQLVKRILRYLKGVLYHGLWL
SKSDNTSLVGFADADWASDPDDRKSTSGLCVYFGNNLVSWGSKKQSIISRSSTEAEYRCLALLATEMVWIRSLLNDLYIDLPFPPILCCDNLSAVHFSANPILHSKTKHV
ELDIYFVRDLIRKEKLFVRHLPATEQIADILTKPLSAQSFHKLKNNLTVIDSAVIGLQGVLR