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Cmc07g0188071 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc07g0188071
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionBiogenesis of lysosome-related organelles complex 1 subunit 7
Genome locationCMiso1.1chr07:6242911..6254903
RNA-Seq ExpressionCmc07g0188071
SyntenyCmc07g0188071
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0031083 - BLOC-1 complex (cellular component)
InterPro domainsIPR017246 - Snapin
IPR028119 - Snapin/Pallidin/Snn1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144641.1 uncharacterized protein LOC101218072 [Cucumis sativus]2.3e-7095.45Show/hide
Query:  MHRPEKLDDDYSANEDSNVSAELETSISPNGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP
        MH PEKLDDDYSANEDSNVSAELETSI+ NGDLQEGND ENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP
Subjt:  MHRPEKLDDDYSANEDSNVSAELETSISPNGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP

Query:  FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPDTRSSLNSSQP
        FIMQHASRISNVRKRVLSLNSILRTIQRR+DNIDRAITMGNLPDTRSS +SSQP
Subjt:  FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPDTRSSLNSSQP

XP_008444284.1 PREDICTED: uncharacterized protein LOC103487651 [Cucumis melo]3.8e-7398.7Show/hide
Query:  MHRPEKLDDDYSANEDSNVSAELETSISPNGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP
        MHRPEKLDDDYSANEDSNVSAELETSISP GDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP
Subjt:  MHRPEKLDDDYSANEDSNVSAELETSISPNGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP

Query:  FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPDTRSSLNSSQP
        FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPDTRSS NSSQP
Subjt:  FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPDTRSSLNSSQP

XP_038897515.1 uncharacterized protein LOC120085558 isoform X1 [Benincasa hispida]1.6e-6393.06Show/hide
Query:  MHRPEKLDDDYSANEDSNVSAELETSISPNGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP
        MH PEKLD DYSANE+SNV +ELETSISPNGDLQEGND ENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQ+ LSSSLDRLTTELDQLLEDAPFP
Subjt:  MHRPEKLDDDYSANEDSNVSAELETSISPNGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP

Query:  FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPD
        FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAI+MGNLP+
Subjt:  FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPD

XP_038897517.1 uncharacterized protein LOC120085558 isoform X2 [Benincasa hispida]5.4e-6493.75Show/hide
Query:  MHRPEKLDDDYSANEDSNVSAELETSISPNGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP
        MH PEKLD DYSANE+SNV +ELETSISPNGDLQEGND ENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQ+ LSSSLDRLTTELDQLLEDAPFP
Subjt:  MHRPEKLDDDYSANEDSNVSAELETSISPNGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP

Query:  FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPD
        FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAI+MGNLPD
Subjt:  FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPD

XP_038897521.1 uncharacterized protein LOC120085558 isoform X5 [Benincasa hispida]5.4e-6493.75Show/hide
Query:  MHRPEKLDDDYSANEDSNVSAELETSISPNGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP
        MH PEKLD DYSANE+SNV +ELETSISPNGDLQEGND ENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQ+ LSSSLDRLTTELDQLLEDAPFP
Subjt:  MHRPEKLDDDYSANEDSNVSAELETSISPNGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP

Query:  FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPD
        FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAI+MGNLPD
Subjt:  FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPD

TrEMBL top hitse value%identityAlignment
A0A1S3BAU4 Biogenesis of lysosome-related organelles complex 1 subunit 71.8e-7398.7Show/hide
Query:  MHRPEKLDDDYSANEDSNVSAELETSISPNGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP
        MHRPEKLDDDYSANEDSNVSAELETSISP GDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP
Subjt:  MHRPEKLDDDYSANEDSNVSAELETSISPNGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP

Query:  FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPDTRSSLNSSQP
        FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPDTRSS NSSQP
Subjt:  FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPDTRSSLNSSQP

A0A6J1F9C2 Biogenesis of lysosome-related organelles complex 1 subunit 73.0e-5278.75Show/hide
Query:  MHRPEKLDDDYSANEDSNVSAELETSISPNGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLT-------TELDQL
        MH PEK+ DD  ANEDS+VS ELETSIS NGDL+E ND  N NL NSNALANGLSSMLINIIRDFDSKADDTLKSQ+ LSSSLDR+T       TELDQL
Subjt:  MHRPEKLDDDYSANEDSNVSAELETSISPNGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLT-------TELDQL

Query:  LEDAPFPFIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPDTRSSLNSSQ
        LE APFPFIMQHASRIS+VRKRVLSLNSIL +IQRR+DNIDRAI+MGN PDT SS +SSQ
Subjt:  LEDAPFPFIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPDTRSSLNSSQ

A0A6J1FEP4 Biogenesis of lysosome-related organelles complex 1 subunit 72.5e-5482.35Show/hide
Query:  MHRPEKLDDDYSANEDSNVSAELETSISPNGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP
        MH PEK+ DD  ANEDS+VS ELETSIS NGDL+E ND  N NL NSNALANGLSSMLINIIRDFDSKADDTLKSQ+ LSSSLDR+TTELDQLLE APFP
Subjt:  MHRPEKLDDDYSANEDSNVSAELETSISPNGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP

Query:  FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPDTRSSLNSSQ
        FIMQHASRIS+VRKRVLSLNSIL +IQRR+DNIDRAI+MGN PDT SS +SSQ
Subjt:  FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPDTRSSLNSSQ

A0A6J1FIR1 Biogenesis of lysosome-related organelles complex 1 subunit 71.1e-5479.87Show/hide
Query:  MHRPEKLDDDYSANEDSNVSAELETSISPNGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP
        MH  EK+ DD SAN+DS VSAELE SISPNGD++E ND  N NLG+SNALANGLSSML+NI+RDFDSKADDTLKSQ+ LS SLDRLT+ELDQLLEDAPFP
Subjt:  MHRPEKLDDDYSANEDSNVSAELETSISPNGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP

Query:  FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPDTRSSLNSSQP
        FIMQHA RIS+VRKRVLSLNSILR++QRRVDNIDR I+M NLPD RSS +SSQP
Subjt:  FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPDTRSSLNSSQP

A0A6J1IKP2 Biogenesis of lysosome-related organelles complex 1 subunit 72.5e-5481.7Show/hide
Query:  MHRPEKLDDDYSANEDSNVSAELETSISPNGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP
        MH PEK+ DD  ANEDS+ S ELETSIS NG+L+E ND  N NL NSNALANGLSSMLINIIRDFDSKADDTLKSQ+ LSSSLDR+TTELDQLLEDAPFP
Subjt:  MHRPEKLDDDYSANEDSNVSAELETSISPNGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP

Query:  FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPDTRSSLNSSQ
        FIMQHASRIS+VRKRVLSLNSILR+IQRR+DNIDRAI+MGN PDT SS + SQ
Subjt:  FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPDTRSSLNSSQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G79070.1 SNARE-associated protein-related1.1e-2750.74Show/hide
Query:  ANEDSNVSAELETSISPNGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNV
        ++ D   SA+  TS   +   ++G  G     G   A+A GLS+ML ++I+DFDSKA DTL SQ+ LS SLDRL  ELDQLLE+AP PFI+QHASRIS+V
Subjt:  ANEDSNVSAELETSISPNGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNV

Query:  RKRVLSLNSILRTIQRRVDNIDRAITMGNLPDTRSS
        ++RV SLN +L+++QRR+DNID  ++     +  SS
Subjt:  RKRVLSLNSILRTIQRRVDNIDRAITMGNLPDTRSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACCGTCCGGAGAAATTGGACGACGATTATTCTGCCAATGAGGACAGCAACGTCTCAGCTGAATTGGAGACTTCAATTAGTCCCAATGGTGATCTCCAGGAAGGAAA
TGATGGTGAAAATAAGAACTTAGGAAATTCTAATGCTCTAGCAAATGGGCTCTCTTCCATGCTTATCAACATCATAAGGGATTTTGACTCGAAAGCTGATGATACTCTCA
AAAGCCAGAACCATCTTTCATCTTCCCTCGATCGTCTTACTACAGAACTGGATCAATTACTTGAAGATGCACCTTTTCCATTCATCATGCAGCATGCCTCAAGGATATCT
AATGTAAGAAAGAGAGTTTTGTCACTGAATTCCATCCTAAGAACTATACAACGAAGAGTGGATAACATAGATCGGGCAATCACGATGGGCAATCTACCAGATACTCGTTC
CTCTCTCAATTCCTCACAGCCTTAA
mRNA sequenceShow/hide mRNA sequence
AGATCGATGGTTGTGGCCAGTCCCAACAGAGCGATGGTTGTCGTGTAACCAAGTTGGGTCTTCCTTAGTTACGTGGCTTTGGATCGTTTCTTCAAAAGAGAAAAAAGCTC
TGACTCCCAGTTCTCTCGCCTCGTCCGGCCACATAGCTGCCGCTGCACCTCCGTCCGACGTTCGTCCAACACCGCAGTCGCACGCCGGTCGTTTTCCATCTCCGCCGGAG
TCGCACGTCGGGACAGAATTGAAATAATATTATCCCAGACATCCTTTTATCTGAACTGGGCTACAAACTTACGACGAGCCAATTATTGAATCCTTCTGGATTCATACCCT
AAGTATTGCGAGACTCTGAACTACAGTAGGTGTGAACTTGGCTGAGATGCACCGTCCGGAGAAATTGGACGACGATTATTCTGCCAATGAGGACAGCAACGTCTCAGCTG
AATTGGAGACTTCAATTAGTCCCAATGGTGATCTCCAGGAAGGAAATGATGGTGAAAATAAGAACTTAGGAAATTCTAATGCTCTAGCAAATGGGCTCTCTTCCATGCTT
ATCAACATCATAAGGGATTTTGACTCGAAAGCTGATGATACTCTCAAAAGCCAGAACCATCTTTCATCTTCCCTCGATCGTCTTACTACAGAACTGGATCAATTACTTGA
AGATGCACCTTTTCCATTCATCATGCAGCATGCCTCAAGGATATCTAATGTAAGAAAGAGAGTTTTGTCACTGAATTCCATCCTAAGAACTATACAACGAAGAGTGGATA
ACATAGATCGGGCAATCACGATGGGCAATCTACCAGATACTCGTTCCTCTCTCAATTCCTCACAGCCTTAAGATTGTACATATCTGCAAGTCCTCTCTCTCTTCTCTACA
TATACACATTATTTTTGACAACGTGTAGAGTGGATCATGCAAGTTTATGTGTACTAAGCTATGTTCATATTGACTAACAATCTTGAATATACTACTTGCTTAAATTATAC
ATTTGTAAGATTTGGTACTCTTCTAATCCATATTTACTTCGTTTATACTAGAATTTTGCTCATTTGTTAATGTTATTTGGT
Protein sequenceShow/hide protein sequence
MHRPEKLDDDYSANEDSNVSAELETSISPNGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFPFIMQHASRIS
NVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPDTRSSLNSSQP