| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0032274.1 putative gag-pol polyprotein, identical [Cucumis melo var. makuwa] | 3.2e-110 | 93.06 | Show/hide |
Query: MTNIPSNQKTAEVWFIDSDCSNHMTGLKPVFKEFNEGEKLKVELENGKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDG
MTNIPS+QKTAEVWFIDS C NHMTGLKPVFKE NEGEKLKVEL NGKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDG
Subjt: MTNIPSNQKTAEVWFIDSDCSNHMTGLKPVFKEFNEGEKLKVELENGKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDG
Query: ACLIKNKQTERVLVKVKMTQSKMFPLEVLNVENFALTATATNTTKNNSKLWYLRYGHLNIKGLSLLNQRDMVIGLSKITAINICEGCVYGKQTRKSFPIG
ACLIKNKQT RVL KVKMTQSKMFPLEV NV++FAL ATATNTTKNNSKLWYLRYGHLNIKG SLL QRDMVIGL KI+AINICEGCVYGKQTRKSFPIG
Subjt: ACLIKNKQTERVLVKVKMTQSKMFPLEVLNVENFALTATATNTTKNNSKLWYLRYGHLNIKGLSLLNQRDMVIGLSKITAINICEGCVYGKQTRKSFPIG
Query: KAWRASKCLELIHADL
KAWRASKCLELIHADL
Subjt: KAWRASKCLELIHADL
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| KAA0045239.1 putative gag-pol polyprotein, identical [Cucumis melo var. makuwa] | 1.3e-119 | 100 | Show/hide |
Query: MTNIPSNQKTAEVWFIDSDCSNHMTGLKPVFKEFNEGEKLKVELENGKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDG
MTNIPSNQKTAEVWFIDSDCSNHMTGLKPVFKEFNEGEKLKVELENGKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDG
Subjt: MTNIPSNQKTAEVWFIDSDCSNHMTGLKPVFKEFNEGEKLKVELENGKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDG
Query: ACLIKNKQTERVLVKVKMTQSKMFPLEVLNVENFALTATATNTTKNNSKLWYLRYGHLNIKGLSLLNQRDMVIGLSKITAINICEGCVYGKQTRKSFPIG
ACLIKNKQTERVLVKVKMTQSKMFPLEVLNVENFALTATATNTTKNNSKLWYLRYGHLNIKGLSLLNQRDMVIGLSKITAINICEGCVYGKQTRKSFPIG
Subjt: ACLIKNKQTERVLVKVKMTQSKMFPLEVLNVENFALTATATNTTKNNSKLWYLRYGHLNIKGLSLLNQRDMVIGLSKITAINICEGCVYGKQTRKSFPIG
Query: KAWRASKCLELIHADL
KAWRASKCLELIHADL
Subjt: KAWRASKCLELIHADL
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| KAA0054939.1 putative gag-pol polyprotein, identical [Cucumis melo var. makuwa] | 1.0e-108 | 92.13 | Show/hide |
Query: MTNIPSNQKTAEVWFIDSDCSNHMTGLKPVFKEFNEGEKLKVELENGKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDG
MTNIPS+QKTAEVWFIDS CSNHMTGLKPVFKE NEGEKLKVEL NGKELQVEGKG VGIETHHGNRILTNVQ+VPDIGYNLLSVGQLMESGYSILFDDG
Subjt: MTNIPSNQKTAEVWFIDSDCSNHMTGLKPVFKEFNEGEKLKVELENGKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDG
Query: ACLIKNKQTERVLVKVKMTQSKMFPLEVLNVENFALTATATNTTKNNSKLWYLRYGHLNIKGLSLLNQRDMVIGLSKITAINICEGCVYGKQTRKSFPIG
A LIKNKQT RVLVKVKMTQSKMFPLEV NVE+FALT TATNTTKNNS+LW+LRYGHLNIKGLSLLNQRDMVIGL KI+AINICEGCVYGKQT+KSFPIG
Subjt: ACLIKNKQTERVLVKVKMTQSKMFPLEVLNVENFALTATATNTTKNNSKLWYLRYGHLNIKGLSLLNQRDMVIGLSKITAINICEGCVYGKQTRKSFPIG
Query: KAWRASKCLELIHADL
KAWRASKCLELIH DL
Subjt: KAWRASKCLELIHADL
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| TYK00906.1 putative gag-pol polyprotein, identical [Cucumis melo var. makuwa] | 6.2e-106 | 90.74 | Show/hide |
Query: MTNIPSNQKTAEVWFIDSDCSNHMTGLKPVFKEFNEGEKLKVELENGKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDG
MTNIPS+QKT E WFID CSNHMTGLKPVFKE NEGEKLKVEL NGK LQVEGKGTV IETHHGNRILTNVQYVPDIGYNLLSVGQLMES YSILFDDG
Subjt: MTNIPSNQKTAEVWFIDSDCSNHMTGLKPVFKEFNEGEKLKVELENGKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDG
Query: ACLIKNKQTERVLVKVKMTQSKMFPLEVLNVENFALTATATNTTKNNSKLWYLRYGHLNIKGLSLLNQRDMVIGLSKITAINICEGCVYGKQTRKSFPIG
ACLIKNKQT RVL KVKMTQSKMFPLEV NVE+FALTATATNTTKNNS+LW+LRYGHLNIKGLSLLNQRDMVIGL KI+AINIC+GCVYGKQTRKSFPIG
Subjt: ACLIKNKQTERVLVKVKMTQSKMFPLEVLNVENFALTATATNTTKNNSKLWYLRYGHLNIKGLSLLNQRDMVIGLSKITAINICEGCVYGKQTRKSFPIG
Query: KAWRASKCLELIHADL
KA RASKCLELIHADL
Subjt: KAWRASKCLELIHADL
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| TYK27735.1 putative gag-pol polyprotein, identical [Cucumis melo var. makuwa] | 4.1e-110 | 93.06 | Show/hide |
Query: MTNIPSNQKTAEVWFIDSDCSNHMTGLKPVFKEFNEGEKLKVELENGKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDG
MTNIPS+QKTAEVWFIDS CSNHMTGLKPVFKE NEGEKLKV+L NGKELQVEGKGTV IETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDG
Subjt: MTNIPSNQKTAEVWFIDSDCSNHMTGLKPVFKEFNEGEKLKVELENGKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDG
Query: ACLIKNKQTERVLVKVKMTQSKMFPLEVLNVENFALTATATNTTKNNSKLWYLRYGHLNIKGLSLLNQRDMVIGLSKITAINICEGCVYGKQTRKSFPIG
ACLIKNKQT RVL KVKMTQSKMFPLEV NVE+FALTATATNTTKNNS+LW+LRYGHLNIKGLSLLNQRDMVIGL KI+AINICEGCVYGKQTRKSFPIG
Subjt: ACLIKNKQTERVLVKVKMTQSKMFPLEVLNVENFALTATATNTTKNNSKLWYLRYGHLNIKGLSLLNQRDMVIGLSKITAINICEGCVYGKQTRKSFPIG
Query: KAWRASKCLELIHADL
KAWRASKCLELIHA L
Subjt: KAWRASKCLELIHADL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SM62 Putative gag-pol polyprotein, identical | 1.5e-110 | 93.06 | Show/hide |
Query: MTNIPSNQKTAEVWFIDSDCSNHMTGLKPVFKEFNEGEKLKVELENGKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDG
MTNIPS+QKTAEVWFIDS C NHMTGLKPVFKE NEGEKLKVEL NGKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDG
Subjt: MTNIPSNQKTAEVWFIDSDCSNHMTGLKPVFKEFNEGEKLKVELENGKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDG
Query: ACLIKNKQTERVLVKVKMTQSKMFPLEVLNVENFALTATATNTTKNNSKLWYLRYGHLNIKGLSLLNQRDMVIGLSKITAINICEGCVYGKQTRKSFPIG
ACLIKNKQT RVL KVKMTQSKMFPLEV NV++FAL ATATNTTKNNSKLWYLRYGHLNIKG SLL QRDMVIGL KI+AINICEGCVYGKQTRKSFPIG
Subjt: ACLIKNKQTERVLVKVKMTQSKMFPLEVLNVENFALTATATNTTKNNSKLWYLRYGHLNIKGLSLLNQRDMVIGLSKITAINICEGCVYGKQTRKSFPIG
Query: KAWRASKCLELIHADL
KAWRASKCLELIHADL
Subjt: KAWRASKCLELIHADL
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| A0A5A7TVH1 Putative gag-pol polyprotein, identical | 6.2e-120 | 100 | Show/hide |
Query: MTNIPSNQKTAEVWFIDSDCSNHMTGLKPVFKEFNEGEKLKVELENGKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDG
MTNIPSNQKTAEVWFIDSDCSNHMTGLKPVFKEFNEGEKLKVELENGKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDG
Subjt: MTNIPSNQKTAEVWFIDSDCSNHMTGLKPVFKEFNEGEKLKVELENGKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDG
Query: ACLIKNKQTERVLVKVKMTQSKMFPLEVLNVENFALTATATNTTKNNSKLWYLRYGHLNIKGLSLLNQRDMVIGLSKITAINICEGCVYGKQTRKSFPIG
ACLIKNKQTERVLVKVKMTQSKMFPLEVLNVENFALTATATNTTKNNSKLWYLRYGHLNIKGLSLLNQRDMVIGLSKITAINICEGCVYGKQTRKSFPIG
Subjt: ACLIKNKQTERVLVKVKMTQSKMFPLEVLNVENFALTATATNTTKNNSKLWYLRYGHLNIKGLSLLNQRDMVIGLSKITAINICEGCVYGKQTRKSFPIG
Query: KAWRASKCLELIHADL
KAWRASKCLELIHADL
Subjt: KAWRASKCLELIHADL
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| A0A5A7UN91 Putative gag-pol polyprotein, identical | 4.9e-109 | 92.13 | Show/hide |
Query: MTNIPSNQKTAEVWFIDSDCSNHMTGLKPVFKEFNEGEKLKVELENGKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDG
MTNIPS+QKTAEVWFIDS CSNHMTGLKPVFKE NEGEKLKVEL NGKELQVEGKG VGIETHHGNRILTNVQ+VPDIGYNLLSVGQLMESGYSILFDDG
Subjt: MTNIPSNQKTAEVWFIDSDCSNHMTGLKPVFKEFNEGEKLKVELENGKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDG
Query: ACLIKNKQTERVLVKVKMTQSKMFPLEVLNVENFALTATATNTTKNNSKLWYLRYGHLNIKGLSLLNQRDMVIGLSKITAINICEGCVYGKQTRKSFPIG
A LIKNKQT RVLVKVKMTQSKMFPLEV NVE+FALT TATNTTKNNS+LW+LRYGHLNIKGLSLLNQRDMVIGL KI+AINICEGCVYGKQT+KSFPIG
Subjt: ACLIKNKQTERVLVKVKMTQSKMFPLEVLNVENFALTATATNTTKNNSKLWYLRYGHLNIKGLSLLNQRDMVIGLSKITAINICEGCVYGKQTRKSFPIG
Query: KAWRASKCLELIHADL
KAWRASKCLELIH DL
Subjt: KAWRASKCLELIHADL
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| A0A5D3BRM6 Putative gag-pol polyprotein, identical | 3.0e-106 | 90.74 | Show/hide |
Query: MTNIPSNQKTAEVWFIDSDCSNHMTGLKPVFKEFNEGEKLKVELENGKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDG
MTNIPS+QKT E WFID CSNHMTGLKPVFKE NEGEKLKVEL NGK LQVEGKGTV IETHHGNRILTNVQYVPDIGYNLLSVGQLMES YSILFDDG
Subjt: MTNIPSNQKTAEVWFIDSDCSNHMTGLKPVFKEFNEGEKLKVELENGKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDG
Query: ACLIKNKQTERVLVKVKMTQSKMFPLEVLNVENFALTATATNTTKNNSKLWYLRYGHLNIKGLSLLNQRDMVIGLSKITAINICEGCVYGKQTRKSFPIG
ACLIKNKQT RVL KVKMTQSKMFPLEV NVE+FALTATATNTTKNNS+LW+LRYGHLNIKGLSLLNQRDMVIGL KI+AINIC+GCVYGKQTRKSFPIG
Subjt: ACLIKNKQTERVLVKVKMTQSKMFPLEVLNVENFALTATATNTTKNNSKLWYLRYGHLNIKGLSLLNQRDMVIGLSKITAINICEGCVYGKQTRKSFPIG
Query: KAWRASKCLELIHADL
KA RASKCLELIHADL
Subjt: KAWRASKCLELIHADL
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| A0A5D3DWP2 Putative gag-pol polyprotein, identical | 2.0e-110 | 93.06 | Show/hide |
Query: MTNIPSNQKTAEVWFIDSDCSNHMTGLKPVFKEFNEGEKLKVELENGKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDG
MTNIPS+QKTAEVWFIDS CSNHMTGLKPVFKE NEGEKLKV+L NGKELQVEGKGTV IETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDG
Subjt: MTNIPSNQKTAEVWFIDSDCSNHMTGLKPVFKEFNEGEKLKVELENGKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDG
Query: ACLIKNKQTERVLVKVKMTQSKMFPLEVLNVENFALTATATNTTKNNSKLWYLRYGHLNIKGLSLLNQRDMVIGLSKITAINICEGCVYGKQTRKSFPIG
ACLIKNKQT RVL KVKMTQSKMFPLEV NVE+FALTATATNTTKNNS+LW+LRYGHLNIKGLSLLNQRDMVIGL KI+AINICEGCVYGKQTRKSFPIG
Subjt: ACLIKNKQTERVLVKVKMTQSKMFPLEVLNVENFALTATATNTTKNNSKLWYLRYGHLNIKGLSLLNQRDMVIGLSKITAINICEGCVYGKQTRKSFPIG
Query: KAWRASKCLELIHADL
KAWRASKCLELIHA L
Subjt: KAWRASKCLELIHADL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.2e-08 | 25.84 | Show/hide |
Query: IDSDCSNHMTGLKPVFKEFNE-GEKLKVEL-ENGKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFD-DGACLIKNKQTERV
+DS S+H+ + ++ + E LK+ + + G+ + +G V + H L +V + + NL+SV +L E+G SI FD G + KN
Subjt: IDSDCSNHMTGLKPVFKEFNE-GEKLKVEL-ENGKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGYSILFD-DGACLIKNKQTERV
Query: LVKVKMTQSKMFPLEVLNVENFALTATATNTTKNNSKLWYLRYGHLNIKGLSLLNQRDMVIGLSKIT----AINICEGCVYGKQTRKSF-PIGKAWRASK
+ V + + V+N + +++ A KNN +LW+ R+GH++ L + +++M S + + ICE C+ GKQ R F + +
Subjt: LVKVKMTQSKMFPLEVLNVENFALTATATNTTKNNSKLWYLRYGHLNIKGLSLLNQRDMVIGLSKIT----AINICEGCVYGKQTRKSF-PIGKAWRASK
Query: CLELIHADL
L ++H+D+
Subjt: CLELIHADL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.7e-13 | 28.16 | Show/hide |
Query: WFIDSDCSNHMTGLKPVFKEFNEGEKLKVELENGKELQVEGKGTVGIETHHG-NRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDGACLIKNKQTERV
W +D+ S+H T ++ +F + G+ V++ N ++ G G + I+T+ G +L +V++VPD+ NL+S L GY F + Q R
Subjt: WFIDSDCSNHMTGLKPVFKEFNEGEKLKVELENGKELQVEGKGTVGIETHHG-NRILTNVQYVPDIGYNLLSVGQLMESGYSILFDDGACLIKNKQTERV
Query: LVKVKMTQSKMFPLEVLNVENFALTATATNTTKN--NSKLWYLRYGHLNIKGLSLLNQRDMVIGLSKITAINICEGCVYGKQTRKSFPIGKAWRASKCLE
L K + +K L N + N ++ + LW+ R GH++ KGL +L ++ + I +K T + C+ C++GKQ R SF R L+
Subjt: LVKVKMTQSKMFPLEVLNVENFALTATATNTTKN--NSKLWYLRYGHLNIKGLSLLNQRDMVIGLSKITAINICEGCVYGKQTRKSFPIGKAWRASKCLE
Query: LIHADL
L+++D+
Subjt: LIHADL
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| P93293 Uncharacterized mitochondrial protein AtMg00300 | 1.5e-06 | 32.43 | Show/hide |
Query: TTKNNSKLWYLRYGHLNIKGLSLLNQRDMVIGLSKITAINICEGCVYGKQTRKSFPIGKAWRASKCLELIHADL
T K+ ++LW+ R H++ +G+ LL ++ + SK++++ CE C+YGK R +F G+ L+ +H+DL
Subjt: TTKNNSKLWYLRYGHLNIKGLSLLNQRDMVIGLSKITAINICEGCVYGKQTRKSFPIGKAWRASKCLELIHADL
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.3e-05 | 23.47 | Show/hide |
Query: WFIDSDCSNHMT---GLKPVFKEFNEGEKLKVELENGKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLME-SGYSILFDDGACLIKNKQT
W +DS ++H+T + + + G+ + V +G + + G+ + T L N+ YVP+I NL+SV +L +G S+ F + +K+ T
Subjt: WFIDSDCSNHMT---GLKPVFKEFNEGEKLKVELENGKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLME-SGYSILFDDGACLIKNKQT
Query: ERVLVKVKMTQSKMFPLEVLNVENFALTATATNTTKNNSKLWYLRYGHLNIKGLSLLNQRDMVIGLSKITAIN------ICEGCVYGKQTRKSFPIGKAW
L++ K T+ +++ + + + +L A+ ++ ++S W+ R GH S+LN VI ++ +N C C+ K + F
Subjt: ERVLVKVKMTQSKMFPLEVLNVENFALTATATNTTKNNSKLWYLRYGHLNIKGLSLLNQRDMVIGLSKITAIN------ICEGCVYGKQTRKSFPIGKAW
Query: RASKCLELIHADL
+++ LE I++D+
Subjt: RASKCLELIHADL
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.9e-05 | 23.39 | Show/hide |
Query: NIPSNQKTAEVWFIDSDCSNHMT---GLKPVFKEFNEGEKLKVELENGKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESG-YSILFD
N P N A W +DS ++H+T + + G+ V + +G + + G+ + T + L V YVP+I NL+SV +L + S+ F
Subjt: NIPSNQKTAEVWFIDSDCSNHMT---GLKPVFKEFNEGEKLKVELENGKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESG-YSILFD
Query: DGACLIKNKQTERVLVKVKMTQSKMFPLEVLNVENFALTATATNTTKNNSKLWYLRYGHLNIKGLSLLNQRDMVIGLSKITAINICEGCVYGKQTRKSFP
+ +K+ T L++ K T+ +++ + + + A++ A+ +K W+ R GH ++ L+ + + L+ + C C K + F
Subjt: DGACLIKNKQTERVLVKVKMTQSKMFPLEVLNVENFALTATATNTTKNNSKLWYLRYGHLNIKGLSLLNQRDMVIGLSKITAINICEGCVYGKQTRKSFP
Query: IGKAWRASKCLELIHADL
+SK LE I++D+
Subjt: IGKAWRASKCLELIHADL
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