| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025703.1 putative gag-pol polyprotein, identical [Cucumis melo var. makuwa] | 2.1e-80 | 75.66 | Show/hide |
Query: MFDESASWDWKNSIEYVVVVDGELTNDGEQIMVESSMETPTSTPLSSTPSTPQSYHSSSSNDETSDELPSQRFRSMEDIYNSSKFALMVSDPVSYDEAAS
MFDESASWDWKNS EYV +VDGELTNDGEQ +VESS+ETPTSTP SSTPSTPQSYHSSSSNDETSD+LPSQRF SMEDIYNSS+FALMVSDPVSYDEAAS
Subjt: MFDESASWDWKNSIEYVVVVDGELTNDGEQIMVESSMETPTSTPLSSTPSTPQSYHSSSSNDETSDELPSQRFRSMEDIYNSSKFALMVSDPVSYDEAAS
Query: KEEWPQAMKEEMTAIEKNGKWKMVDLPEGKNAIGLKWVYKTKFAADGSLEKHKARLMAKGYAQQHGIDFEEIFSSVAHFETVRIVLALAAQQQWPVYQFD
KEEW QAMKEEM AIE NG WK+VDLP IGLKWVYK+KFAADGSL+KHKARL+AK YAQQH AQQQW VYQFD
Subjt: KEEWPQAMKEEMTAIEKNGKWKMVDLPEGKNAIGLKWVYKTKFAADGSLEKHKARLMAKGYAQQHGIDFEEIFSSVAHFETVRIVLALAAQQQWPVYQFD
Query: VKSTFLNEELQEEVYVEQPEGFVKKD
VKS FLN EL VYVEQPE FVKKD
Subjt: VKSTFLNEELQEEVYVEQPEGFVKKD
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| KAA0033341.1 putative gag-pol polyprotein, identical [Cucumis melo var. makuwa] | 4.0e-103 | 87.28 | Show/hide |
Query: MFDESASWDWKNSIEYVVVVDGELTNDGEQIMVESSMETPTSTPLSSTPSTPQSYHSSSSNDETSDELPSQRFRSMEDIYNSSKFALMVSDPVSYDEAAS
+FDESASWDWK+S EYV +VDGELTNDGEQ +VESSMET TSTP SSTPSTPQSYHSSSSNDETSDELPSQRFRSMEDIYNSS FALMVSDPV YDEAA+
Subjt: MFDESASWDWKNSIEYVVVVDGELTNDGEQIMVESSMETPTSTPLSSTPSTPQSYHSSSSNDETSDELPSQRFRSMEDIYNSSKFALMVSDPVSYDEAAS
Query: KEEWPQAMKEEMTAIEKNGKWKMVDLPEGKNAIGLKWVYKTKFAADGSLEKHKARLMAKGYAQQHGIDFEEIFSSVAHFETVRIVLALAAQQQWPVYQFD
KEEW Q MKEEM AIEKNG WK+VDL EGKNAIGLKWVYKTKFAADGSLEKHKARL+AKGYAQQHGIDFEE FS VA FETVRIVLA A QQQWPVYQFD
Subjt: KEEWPQAMKEEMTAIEKNGKWKMVDLPEGKNAIGLKWVYKTKFAADGSLEKHKARLMAKGYAQQHGIDFEEIFSSVAHFETVRIVLALAAQQQWPVYQFD
Query: VKSTFLNEELQEEVYVEQPEGFVKKDRK
VKS FLN ELQEEVYVEQP+GFVKKD +
Subjt: VKSTFLNEELQEEVYVEQPEGFVKKDRK
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| KAA0045237.1 integrase [Cucumis melo var. makuwa] | 1.3e-122 | 100 | Show/hide |
Query: MFDESASWDWKNSIEYVVVVDGELTNDGEQIMVESSMETPTSTPLSSTPSTPQSYHSSSSNDETSDELPSQRFRSMEDIYNSSKFALMVSDPVSYDEAAS
MFDESASWDWKNSIEYVVVVDGELTNDGEQIMVESSMETPTSTPLSSTPSTPQSYHSSSSNDETSDELPSQRFRSMEDIYNSSKFALMVSDPVSYDEAAS
Subjt: MFDESASWDWKNSIEYVVVVDGELTNDGEQIMVESSMETPTSTPLSSTPSTPQSYHSSSSNDETSDELPSQRFRSMEDIYNSSKFALMVSDPVSYDEAAS
Query: KEEWPQAMKEEMTAIEKNGKWKMVDLPEGKNAIGLKWVYKTKFAADGSLEKHKARLMAKGYAQQHGIDFEEIFSSVAHFETVRIVLALAAQQQWPVYQFD
KEEWPQAMKEEMTAIEKNGKWKMVDLPEGKNAIGLKWVYKTKFAADGSLEKHKARLMAKGYAQQHGIDFEEIFSSVAHFETVRIVLALAAQQQWPVYQFD
Subjt: KEEWPQAMKEEMTAIEKNGKWKMVDLPEGKNAIGLKWVYKTKFAADGSLEKHKARLMAKGYAQQHGIDFEEIFSSVAHFETVRIVLALAAQQQWPVYQFD
Query: VKSTFLNEELQEEVYVEQPEGFVKKDRKGV
VKSTFLNEELQEEVYVEQPEGFVKKDRKGV
Subjt: VKSTFLNEELQEEVYVEQPEGFVKKDRKGV
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| KAA0059765.1 integrase [Cucumis melo var. makuwa] | 1.1e-97 | 86.76 | Show/hide |
Query: WDWKNSIEYVVVVDGELTNDGEQIMVESSMETPTSTPLSSTPSTPQSYHSSSSNDETSDELPSQRFRSMEDIYNSSKFALMVSDPVSYDEAASKEEWPQA
WDWKN+ EYV +VDGELTNDGEQ ES METPTSTPLSST ST QSYHSSSSNDETSDELPSQRFR MEDIYNSS+F LMVSDPVSYDEAASKEEW QA
Subjt: WDWKNSIEYVVVVDGELTNDGEQIMVESSMETPTSTPLSSTPSTPQSYHSSSSNDETSDELPSQRFRSMEDIYNSSKFALMVSDPVSYDEAASKEEWPQA
Query: MKEEMTAIEKNGKWKMVDLPEGKNAIGLKWVYKTKFAADGSLEKHKARLMAKGYAQQHGIDFEEIFSSVAHFETVRIVLALAAQQQWPVYQFDVKSTFLN
MKEEM AIEKNG WKMVDLPEGKNAIGLKWVYK+KF +GSLEKHKARL+AKGYAQQHGIDFEE FS VA FETVRIVLALAAQQQWPVYQFDVKS FLN
Subjt: MKEEMTAIEKNGKWKMVDLPEGKNAIGLKWVYKTKFAADGSLEKHKARLMAKGYAQQHGIDFEEIFSSVAHFETVRIVLALAAQQQWPVYQFDVKSTFLN
Query: EELQEEVYVEQPEGFVKKD
EL+EE VEQPEGFVKKD
Subjt: EELQEEVYVEQPEGFVKKD
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| TYK21566.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.1e-79 | 74.89 | Show/hide |
Query: ASWDWKNSIEYVVVVDGELTNDGEQIMVESSMETPTSTPLSSTPSTPQSYHSSSSNDETSDELPSQRFRSMEDIYNSSKFALMVSDPVSYDEAASKEEWP
A WDWK+S EYV +VDGELTNDGEQ +VESSMET TSTP SSTPSTPQSYHSSSSNDETSDELPSQRFRSMEDIYNSS FALMVSDPV YDEAA+KEEW
Subjt: ASWDWKNSIEYVVVVDGELTNDGEQIMVESSMETPTSTPLSSTPSTPQSYHSSSSNDETSDELPSQRFRSMEDIYNSSKFALMVSDPVSYDEAASKEEWP
Query: QAMKEEMTAIEKNGKWKMVDLPEGKNAIGLKWVYKTKFAADGSLEKHKARLMAKGYAQQHGIDFEEIFSSVAHFETVRIVLALAAQQQWPVYQFDVKSTF
Q MKEEM AIEKNG WK+VDL EGKNAIGLKWVYKTKFAADG+ FETVRIVLA A QQQWPVYQFDVKS F
Subjt: QAMKEEMTAIEKNGKWKMVDLPEGKNAIGLKWVYKTKFAADGSLEKHKARLMAKGYAQQHGIDFEEIFSSVAHFETVRIVLALAAQQQWPVYQFDVKSTF
Query: LNEELQEEVYVEQPEGFVKKDRK
LN ELQEEVYVEQP+GFVKKD +
Subjt: LNEELQEEVYVEQPEGFVKKDRK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SV62 Putative gag-pol polyprotein, identical | 1.9e-103 | 87.28 | Show/hide |
Query: MFDESASWDWKNSIEYVVVVDGELTNDGEQIMVESSMETPTSTPLSSTPSTPQSYHSSSSNDETSDELPSQRFRSMEDIYNSSKFALMVSDPVSYDEAAS
+FDESASWDWK+S EYV +VDGELTNDGEQ +VESSMET TSTP SSTPSTPQSYHSSSSNDETSDELPSQRFRSMEDIYNSS FALMVSDPV YDEAA+
Subjt: MFDESASWDWKNSIEYVVVVDGELTNDGEQIMVESSMETPTSTPLSSTPSTPQSYHSSSSNDETSDELPSQRFRSMEDIYNSSKFALMVSDPVSYDEAAS
Query: KEEWPQAMKEEMTAIEKNGKWKMVDLPEGKNAIGLKWVYKTKFAADGSLEKHKARLMAKGYAQQHGIDFEEIFSSVAHFETVRIVLALAAQQQWPVYQFD
KEEW Q MKEEM AIEKNG WK+VDL EGKNAIGLKWVYKTKFAADGSLEKHKARL+AKGYAQQHGIDFEE FS VA FETVRIVLA A QQQWPVYQFD
Subjt: KEEWPQAMKEEMTAIEKNGKWKMVDLPEGKNAIGLKWVYKTKFAADGSLEKHKARLMAKGYAQQHGIDFEEIFSSVAHFETVRIVLALAAQQQWPVYQFD
Query: VKSTFLNEELQEEVYVEQPEGFVKKDRK
VKS FLN ELQEEVYVEQP+GFVKKD +
Subjt: VKSTFLNEELQEEVYVEQPEGFVKKDRK
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| A0A5A7TTL4 Integrase | 6.4e-123 | 100 | Show/hide |
Query: MFDESASWDWKNSIEYVVVVDGELTNDGEQIMVESSMETPTSTPLSSTPSTPQSYHSSSSNDETSDELPSQRFRSMEDIYNSSKFALMVSDPVSYDEAAS
MFDESASWDWKNSIEYVVVVDGELTNDGEQIMVESSMETPTSTPLSSTPSTPQSYHSSSSNDETSDELPSQRFRSMEDIYNSSKFALMVSDPVSYDEAAS
Subjt: MFDESASWDWKNSIEYVVVVDGELTNDGEQIMVESSMETPTSTPLSSTPSTPQSYHSSSSNDETSDELPSQRFRSMEDIYNSSKFALMVSDPVSYDEAAS
Query: KEEWPQAMKEEMTAIEKNGKWKMVDLPEGKNAIGLKWVYKTKFAADGSLEKHKARLMAKGYAQQHGIDFEEIFSSVAHFETVRIVLALAAQQQWPVYQFD
KEEWPQAMKEEMTAIEKNGKWKMVDLPEGKNAIGLKWVYKTKFAADGSLEKHKARLMAKGYAQQHGIDFEEIFSSVAHFETVRIVLALAAQQQWPVYQFD
Subjt: KEEWPQAMKEEMTAIEKNGKWKMVDLPEGKNAIGLKWVYKTKFAADGSLEKHKARLMAKGYAQQHGIDFEEIFSSVAHFETVRIVLALAAQQQWPVYQFD
Query: VKSTFLNEELQEEVYVEQPEGFVKKDRKGV
VKSTFLNEELQEEVYVEQPEGFVKKDRKGV
Subjt: VKSTFLNEELQEEVYVEQPEGFVKKDRKGV
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| A0A5A7V1M6 Integrase | 5.4e-98 | 86.76 | Show/hide |
Query: WDWKNSIEYVVVVDGELTNDGEQIMVESSMETPTSTPLSSTPSTPQSYHSSSSNDETSDELPSQRFRSMEDIYNSSKFALMVSDPVSYDEAASKEEWPQA
WDWKN+ EYV +VDGELTNDGEQ ES METPTSTPLSST ST QSYHSSSSNDETSDELPSQRFR MEDIYNSS+F LMVSDPVSYDEAASKEEW QA
Subjt: WDWKNSIEYVVVVDGELTNDGEQIMVESSMETPTSTPLSSTPSTPQSYHSSSSNDETSDELPSQRFRSMEDIYNSSKFALMVSDPVSYDEAASKEEWPQA
Query: MKEEMTAIEKNGKWKMVDLPEGKNAIGLKWVYKTKFAADGSLEKHKARLMAKGYAQQHGIDFEEIFSSVAHFETVRIVLALAAQQQWPVYQFDVKSTFLN
MKEEM AIEKNG WKMVDLPEGKNAIGLKWVYK+KF +GSLEKHKARL+AKGYAQQHGIDFEE FS VA FETVRIVLALAAQQQWPVYQFDVKS FLN
Subjt: MKEEMTAIEKNGKWKMVDLPEGKNAIGLKWVYKTKFAADGSLEKHKARLMAKGYAQQHGIDFEEIFSSVAHFETVRIVLALAAQQQWPVYQFDVKSTFLN
Query: EELQEEVYVEQPEGFVKKD
EL+EE VEQPEGFVKKD
Subjt: EELQEEVYVEQPEGFVKKD
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| A0A5D3C5V1 Integrase, catalytic core | 5.1e-80 | 88.52 | Show/hide |
Query: EYVVVVDGELTNDGEQIMVESSMETPTSTPLSSTPSTPQSYHSSSSNDETSDELPSQRFRSMEDIYNSSKFALMVSDPVSYDEAASKEEWPQAMKEEMTA
EYV +VDGELTNDGEQ +VESSMET TSTP SST ST QSYHSSSSNDETSDELPSQRFRSMEDIYNSS+FALMV DPV YDEAASKEEW QAMKEEMTA
Subjt: EYVVVVDGELTNDGEQIMVESSMETPTSTPLSSTPSTPQSYHSSSSNDETSDELPSQRFRSMEDIYNSSKFALMVSDPVSYDEAASKEEWPQAMKEEMTA
Query: IEKNGKWKMVDLPEGKNAIGLKWVYKTKFAADGSLEKHKARLMAKGYAQQHGIDFEEIFSSVAHFETVRIVLALAAQQQWPVY
IEKNG WKMVDLPEGKN IGLKW YKTKF ADGSLEKHKARL+AKGYAQQHGIDFEE FS VA FE VRIVLALAAQQQWPVY
Subjt: IEKNGKWKMVDLPEGKNAIGLKWVYKTKFAADGSLEKHKARLMAKGYAQQHGIDFEEIFSSVAHFETVRIVLALAAQQQWPVY
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| A0A5D3CN49 Putative gag-pol polyprotein, identical | 1.0e-80 | 75.66 | Show/hide |
Query: MFDESASWDWKNSIEYVVVVDGELTNDGEQIMVESSMETPTSTPLSSTPSTPQSYHSSSSNDETSDELPSQRFRSMEDIYNSSKFALMVSDPVSYDEAAS
MFDESASWDWKNS EYV +VDGELTNDGEQ +VESS+ETPTSTP SSTPSTPQSYHSSSSNDETSD+LPSQRF SMEDIYNSS+FALMVSDPVSYDEAAS
Subjt: MFDESASWDWKNSIEYVVVVDGELTNDGEQIMVESSMETPTSTPLSSTPSTPQSYHSSSSNDETSDELPSQRFRSMEDIYNSSKFALMVSDPVSYDEAAS
Query: KEEWPQAMKEEMTAIEKNGKWKMVDLPEGKNAIGLKWVYKTKFAADGSLEKHKARLMAKGYAQQHGIDFEEIFSSVAHFETVRIVLALAAQQQWPVYQFD
KEEW QAMKEEM AIE NG WK+VDLP IGLKWVYK+KFAADGSL+KHKARL+AK YAQQH AQQQW VYQFD
Subjt: KEEWPQAMKEEMTAIEKNGKWKMVDLPEGKNAIGLKWVYKTKFAADGSLEKHKARLMAKGYAQQHGIDFEEIFSSVAHFETVRIVLALAAQQQWPVYQFD
Query: VKSTFLNEELQEEVYVEQPEGFVKKD
VKS FLN EL VYVEQPE FVKKD
Subjt: VKSTFLNEELQEEVYVEQPEGFVKKD
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 5.2e-21 | 38.35 | Show/hide |
Query: PVSYDEAA---SKEEWPQAMKEEMTAIEKNGKWKMVDLPEGKNAIGLKWVYKTKFAADGSLEKHKARLMAKGYAQQHGIDFEEIFSSVAHFETVRIVLAL
P S+DE K W +A+ E+ A + N W + PE KN + +WV+ K+ G+ ++KARL+A+G+ Q++ ID+EE F+ VA + R +L+L
Subjt: PVSYDEAA---SKEEWPQAMKEEMTAIEKNGKWKMVDLPEGKNAIGLKWVYKTKFAADGSLEKHKARLMAKGYAQQHGIDFEEIFSSVAHFETVRIVLAL
Query: AAQQQWPVYQFDVKSTFLNEELQEEVYVEQPEG
Q V+Q DVK+ FLN L+EE+Y+ P+G
Subjt: AAQQQWPVYQFDVKSTFLNEELQEEVYVEQPEG
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.3e-27 | 41.01 | Show/hide |
Query: HSSSSNDETSDELPSQRFRSMEDIYNSSKFALMVSD--PVSYDEAAS---KEEWPQAMKEEMTAIEKNGKWKMVDLPEGKNAIGLKWVYKTKFAADGSLE
H + ++ S+R R Y S+++ L+ D P S E S K + +AM+EEM +++KNG +K+V+LP+GK + KWV+K K D L
Subjt: HSSSSNDETSDELPSQRFRSMEDIYNSSKFALMVSD--PVSYDEAAS---KEEWPQAMKEEMTAIEKNGKWKMVDLPEGKNAIGLKWVYKTKFAADGSLE
Query: KHKARLMAKGYAQQHGIDFEEIFSSVAHFETVRIVLALAAQQQWPVYQFDVKSTFLNEELQEEVYVEQPEGFVKKDRK
++KARL+ KG+ Q+ GIDF+EIFS V ++R +L+LAA V Q DVK+ FL+ +L+EE+Y+EQPEGF +K
Subjt: KHKARLMAKGYAQQHGIDFEEIFSSVAHFETVRIVLALAAQQQWPVYQFDVKSTFLNEELQEEVYVEQPEGFVKKDRK
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 2.9e-16 | 43.56 | Show/hide |
Query: DPVSYDEAASKEEWPQAMKEEMTAIEKNGKWKMVDLPEGKNAIGLKWVYKTKFAADGSLEKHKARLMAKGYAQQHGIDFEEIFSSVAHFETVRIVLALAA
+P S A W QAM+EE+ A+ +N W +V P +N +G KWV+KTK +DG+L++ KARL+AKG+ Q+ GI F E +S V T+R +L +A
Subjt: DPVSYDEAASKEEWPQAMKEEMTAIEKNGKWKMVDLPEGKNAIGLKWVYKTKFAADGSLEKHKARLMAKGYAQQHGIDFEEIFSSVAHFETVRIVLALAA
Query: Q
Q
Subjt: Q
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.1e-22 | 35.41 | Show/hide |
Query: SSMETPTSTPLSSTPSTPQSY---------HSSSSNDETSDELPSQRFRSMEDIYN-SSKFALMV-----SDPVSYDEAASKEEWPQAMKEEMTAIEKNG
SS TS SST TP S ++N++ S R+ I + K++L V S+P + +A E W AM E+ A N
Subjt: SSMETPTSTPLSSTPSTPQSY---------HSSSSNDETSDELPSQRFRSMEDIYN-SSKFALMV-----SDPVSYDEAASKEEWPQAMKEEMTAIEKNG
Query: KWKMVDLPEGK-NAIGLKWVYKTKFAADGSLEKHKARLMAKGYAQQHGIDFEEIFSSVAHFETVRIVLALAAQQQWPVYQFDVKSTFLNEELQEEVYVEQ
W +V P +G +W++ K+ +DGSL ++KARL+AKGY Q+ G+D+ E FS V ++RIVL +A + WP+ Q DV + FL L ++VY+ Q
Subjt: KWKMVDLPEGK-NAIGLKWVYKTKFAADGSLEKHKARLMAKGYAQQHGIDFEEIFSSVAHFETVRIVLALAAQQQWPVYQFDVKSTFLNEELQEEVYVEQ
Query: PEGFVKKDR
P GF+ KDR
Subjt: PEGFVKKDR
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 5.0e-24 | 36.08 | Show/hide |
Query: SSMETPTSTPLSSTPSTPQSYHSSSSNDETSDELPSQRFRSMEDIYNSSKFALMVSDPVSYDEAASKEEWPQAMKEEMTAIEKNGKWKMV-DLPEGKNAI
SS TP P+ P Q + N + R Y+ + S+P + +A + W QAM E+ A N W +V P +
Subjt: SSMETPTSTPLSSTPSTPQSYHSSSSNDETSDELPSQRFRSMEDIYNSSKFALMVSDPVSYDEAASKEEWPQAMKEEMTAIEKNGKWKMV-DLPEGKNAI
Query: GLKWVYKTKFAADGSLEKHKARLMAKGYAQQHGIDFEEIFSSVAHFETVRIVLALAAQQQWPVYQFDVKSTFLNEELQEEVYVEQPEGFVKKDR
G +W++ KF +DGSL ++KARL+AKGY Q+ G+D+ E FS V ++RIVL +A + WP+ Q DV + FL L +EVY+ QP GFV KDR
Subjt: GLKWVYKTKFAADGSLEKHKARLMAKGYAQQHGIDFEEIFSSVAHFETVRIVLALAAQQQWPVYQFDVKSTFLNEELQEEVYVEQPEGFVKKDR
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