; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc07g0189231 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc07g0189231
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationCMiso1.1chr07:7914135..7914638
RNA-Seq ExpressionCmc07g0189231
SyntenyCmc07g0189231
Gene Ontology termsNA
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045233.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.6e-90100Show/hide
Query:  MKFQKGSFSLQTFCDSDWIGDTSYRRPTYGFIAFLGSNPISWSSKKQSTVSRSSTKAQYCCLATTTADLYWIRQLLFDLHVPLKTSPTLLCDNVSAVSLA
        MKFQKGSFSLQTFCDSDWIGDTSYRRPTYGFIAFLGSNPISWSSKKQSTVSRSSTKAQYCCLATTTADLYWIRQLLFDLHVPLKTSPTLLCDNVSAVSLA
Subjt:  MKFQKGSFSLQTFCDSDWIGDTSYRRPTYGFIAFLGSNPISWSSKKQSTVSRSSTKAQYCCLATTTADLYWIRQLLFDLHVPLKTSPTLLCDNVSAVSLA

Query:  HNPIFHARTKHIEIDYHFVREKVLRKDISICYISSNNQLADILTKPLLSPTFLHLRDKLLTQPESSV
        HNPIFHARTKHIEIDYHFVREKVLRKDISICYISSNNQLADILTKPLLSPTFLHLRDKLLTQPESSV
Subjt:  HNPIFHARTKHIEIDYHFVREKVLRKDISICYISSNNQLADILTKPLLSPTFLHLRDKLLTQPESSV

KAA0045362.1 putative mitochondrial protein [Cucumis melo var. makuwa]4.2e-7889.22Show/hide
Query:  MKFQKGSFSLQTFCDSDWIGDTSYRRPTYGFIAFLGSNPISWSSKKQSTVSRSSTKAQYCCLATTTADLYWIRQLLFDLHVPLKTSPTLLCDNVSAVSLA
        +KF+KGSFSLQTFCDSDW  DTS RR T GFIAFLGSNPISWSSKKQS VSRSST+A+YC LATTTADLYWIRQLL DLHVPLKTSPTL CDNVSA+SLA
Subjt:  MKFQKGSFSLQTFCDSDWIGDTSYRRPTYGFIAFLGSNPISWSSKKQSTVSRSSTKAQYCCLATTTADLYWIRQLLFDLHVPLKTSPTLLCDNVSAVSLA

Query:  HNPIFHARTKHIEIDYHFVREKVLRKDISICYISSNNQLADILTKPLLSPTFLHLRDKLLTQPESSV
        HNP+FHARTKHIEIDYHFV EKVL KDISICYI SNNQLADILTKPLLSPTFLHLRDKLLTQPESSV
Subjt:  HNPIFHARTKHIEIDYHFVREKVLRKDISICYISSNNQLADILTKPLLSPTFLHLRDKLLTQPESSV

KAA0047933.1 putative mitochondrial protein [Cucumis melo var. makuwa]5.3e-7385.54Show/hide
Query:  MKFQKGSFSLQTFCDSDWIGDTSYRRPTYGFIAFLGSNPISWSSKKQSTVSRSSTKAQYCCLATTTADLYWIRQLLFDLHVPLKTSPTLLCDNVSAVSLA
        +KF+K SFSLQTFCDSDW  DTS RR T GFIAFLGSNPISW SKKQSTVSRSST+A+Y  LATTTADLYWIRQLL DLHVPLKT+PTL CDNV A+SL 
Subjt:  MKFQKGSFSLQTFCDSDWIGDTSYRRPTYGFIAFLGSNPISWSSKKQSTVSRSSTKAQYCCLATTTADLYWIRQLLFDLHVPLKTSPTLLCDNVSAVSLA

Query:  HNPIFHARTKHIEIDYHFVREKVLRKDISICYISSNNQLADILTKPLLSPTFLHLRDKLLTQPESS
        HNP+FHARTKHIEIDYHFVREKV RKDISI YISSNNQL DILTKPLLSPTFLHL DKLLTQPESS
Subjt:  HNPIFHARTKHIEIDYHFVREKVLRKDISICYISSNNQLADILTKPLLSPTFLHLRDKLLTQPESS

XP_016901044.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]9.7e-7586.83Show/hide
Query:  MKFQKGSFSLQTFCDSDWIGDTSYRRPTYGFIAFLGSNPISWSSKKQSTVSRSSTKAQYCCLATTTADLYWIRQLLFDLHVPLKTSPTLLCDNVSAVSLA
        +KF+K  FSLQTFCD DW GDTS RR T  FIAFLGSNPISWSSKKQSTVSRSST+A+YC LATTT DLYWIRQLL DLHVPLKTSPTL CDNVSA+SLA
Subjt:  MKFQKGSFSLQTFCDSDWIGDTSYRRPTYGFIAFLGSNPISWSSKKQSTVSRSSTKAQYCCLATTTADLYWIRQLLFDLHVPLKTSPTLLCDNVSAVSLA

Query:  HNPIFHARTKHIEIDYHFVREKVLRKDISICYISSNNQLADILTKPLLSPTFLHLRDKLLTQPESSV
        HNP+FHARTKHIEIDYHFVR+KVLRKDISI YI SNNQLADILTKPLLSPTFLHLRDKLLTQ ESSV
Subjt:  HNPIFHARTKHIEIDYHFVREKVLRKDISICYISSNNQLADILTKPLLSPTFLHLRDKLLTQPESSV

XP_016902250.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]8.5e-7183.83Show/hide
Query:  MKFQKGSFSLQTFCDSDWIGDTSYRRPTYGFIAFLGSNPISWSSKKQSTVSRSSTKAQYCCLATTTADLYWIRQLLFDLHVPLKTSPTLLCDNVSAVSLA
        +KF+KGSFSLQTFCDS+W GDT  R  T GFIAFLGSNPISWSSKKQSTVSRSST+A+Y  LATTT DLYWIRQL+ DLHVPLKTSPTL  DNVSA+SLA
Subjt:  MKFQKGSFSLQTFCDSDWIGDTSYRRPTYGFIAFLGSNPISWSSKKQSTVSRSSTKAQYCCLATTTADLYWIRQLLFDLHVPLKTSPTLLCDNVSAVSLA

Query:  HNPIFHARTKHIEIDYHFVREKVLRKDISICYISSNNQLADILTKPLLSPTFLHLRDKLLTQPESSV
        HNPIFHAR KHI+IDYHFV +KVLRKDIS  YISSNNQLADILTKPLLSPTFL LRDKLLTQP+SSV
Subjt:  HNPIFHARTKHIEIDYHFVREKVLRKDISICYISSNNQLADILTKPLLSPTFLHLRDKLLTQPESSV

TrEMBL top hitse value%identityAlignment
A0A1S4DYI8 uncharacterized mitochondrial protein AtMg00810-like4.7e-7586.83Show/hide
Query:  MKFQKGSFSLQTFCDSDWIGDTSYRRPTYGFIAFLGSNPISWSSKKQSTVSRSSTKAQYCCLATTTADLYWIRQLLFDLHVPLKTSPTLLCDNVSAVSLA
        +KF+K  FSLQTFCD DW GDTS RR T  FIAFLGSNPISWSSKKQSTVSRSST+A+YC LATTT DLYWIRQLL DLHVPLKTSPTL CDNVSA+SLA
Subjt:  MKFQKGSFSLQTFCDSDWIGDTSYRRPTYGFIAFLGSNPISWSSKKQSTVSRSSTKAQYCCLATTTADLYWIRQLLFDLHVPLKTSPTLLCDNVSAVSLA

Query:  HNPIFHARTKHIEIDYHFVREKVLRKDISICYISSNNQLADILTKPLLSPTFLHLRDKLLTQPESSV
        HNP+FHARTKHIEIDYHFVR+KVLRKDISI YI SNNQLADILTKPLLSPTFLHLRDKLLTQ ESSV
Subjt:  HNPIFHARTKHIEIDYHFVREKVLRKDISICYISSNNQLADILTKPLLSPTFLHLRDKLLTQPESSV

A0A1S4E2P5 uncharacterized mitochondrial protein AtMg00810-like4.1e-7183.83Show/hide
Query:  MKFQKGSFSLQTFCDSDWIGDTSYRRPTYGFIAFLGSNPISWSSKKQSTVSRSSTKAQYCCLATTTADLYWIRQLLFDLHVPLKTSPTLLCDNVSAVSLA
        +KF+KGSFSLQTFCDS+W GDT  R  T GFIAFLGSNPISWSSKKQSTVSRSST+A+Y  LATTT DLYWIRQL+ DLHVPLKTSPTL  DNVSA+SLA
Subjt:  MKFQKGSFSLQTFCDSDWIGDTSYRRPTYGFIAFLGSNPISWSSKKQSTVSRSSTKAQYCCLATTTADLYWIRQLLFDLHVPLKTSPTLLCDNVSAVSLA

Query:  HNPIFHARTKHIEIDYHFVREKVLRKDISICYISSNNQLADILTKPLLSPTFLHLRDKLLTQPESSV
        HNPIFHAR KHI+IDYHFV +KVLRKDIS  YISSNNQLADILTKPLLSPTFL LRDKLLTQP+SSV
Subjt:  HNPIFHARTKHIEIDYHFVREKVLRKDISICYISSNNQLADILTKPLLSPTFLHLRDKLLTQPESSV

A0A5A7TNW4 Putative mitochondrial protein8.0e-91100Show/hide
Query:  MKFQKGSFSLQTFCDSDWIGDTSYRRPTYGFIAFLGSNPISWSSKKQSTVSRSSTKAQYCCLATTTADLYWIRQLLFDLHVPLKTSPTLLCDNVSAVSLA
        MKFQKGSFSLQTFCDSDWIGDTSYRRPTYGFIAFLGSNPISWSSKKQSTVSRSSTKAQYCCLATTTADLYWIRQLLFDLHVPLKTSPTLLCDNVSAVSLA
Subjt:  MKFQKGSFSLQTFCDSDWIGDTSYRRPTYGFIAFLGSNPISWSSKKQSTVSRSSTKAQYCCLATTTADLYWIRQLLFDLHVPLKTSPTLLCDNVSAVSLA

Query:  HNPIFHARTKHIEIDYHFVREKVLRKDISICYISSNNQLADILTKPLLSPTFLHLRDKLLTQPESSV
        HNPIFHARTKHIEIDYHFVREKVLRKDISICYISSNNQLADILTKPLLSPTFLHLRDKLLTQPESSV
Subjt:  HNPIFHARTKHIEIDYHFVREKVLRKDISICYISSNNQLADILTKPLLSPTFLHLRDKLLTQPESSV

A0A5A7TPR4 Putative mitochondrial protein2.0e-7889.22Show/hide
Query:  MKFQKGSFSLQTFCDSDWIGDTSYRRPTYGFIAFLGSNPISWSSKKQSTVSRSSTKAQYCCLATTTADLYWIRQLLFDLHVPLKTSPTLLCDNVSAVSLA
        +KF+KGSFSLQTFCDSDW  DTS RR T GFIAFLGSNPISWSSKKQS VSRSST+A+YC LATTTADLYWIRQLL DLHVPLKTSPTL CDNVSA+SLA
Subjt:  MKFQKGSFSLQTFCDSDWIGDTSYRRPTYGFIAFLGSNPISWSSKKQSTVSRSSTKAQYCCLATTTADLYWIRQLLFDLHVPLKTSPTLLCDNVSAVSLA

Query:  HNPIFHARTKHIEIDYHFVREKVLRKDISICYISSNNQLADILTKPLLSPTFLHLRDKLLTQPESSV
        HNP+FHARTKHIEIDYHFV EKVL KDISICYI SNNQLADILTKPLLSPTFLHLRDKLLTQPESSV
Subjt:  HNPIFHARTKHIEIDYHFVREKVLRKDISICYISSNNQLADILTKPLLSPTFLHLRDKLLTQPESSV

A0A5A7TWG2 Putative mitochondrial protein2.6e-7385.54Show/hide
Query:  MKFQKGSFSLQTFCDSDWIGDTSYRRPTYGFIAFLGSNPISWSSKKQSTVSRSSTKAQYCCLATTTADLYWIRQLLFDLHVPLKTSPTLLCDNVSAVSLA
        +KF+K SFSLQTFCDSDW  DTS RR T GFIAFLGSNPISW SKKQSTVSRSST+A+Y  LATTTADLYWIRQLL DLHVPLKT+PTL CDNV A+SL 
Subjt:  MKFQKGSFSLQTFCDSDWIGDTSYRRPTYGFIAFLGSNPISWSSKKQSTVSRSSTKAQYCCLATTTADLYWIRQLLFDLHVPLKTSPTLLCDNVSAVSLA

Query:  HNPIFHARTKHIEIDYHFVREKVLRKDISICYISSNNQLADILTKPLLSPTFLHLRDKLLTQPESS
        HNP+FHARTKHIEIDYHFVREKV RKDISI YISSNNQL DILTKPLLSPTFLHL DKLLTQPESS
Subjt:  HNPIFHARTKHIEIDYHFVREKVLRKDISICYISSNNQLADILTKPLLSPTFLHLRDKLLTQPESS

SwissProt top hitse value%identityAlignment
P04146 Copia protein3.9e-2641.03Show/hide
Query:  FCDSDWIGDTSYRRPTYGFI-AFLGSNPISWSSKKQSTVSRSSTKAQYCCLATTTADLYWIRQLLFDLHVPLKTSPTLLCDNVSAVSLAHNPIFHARTKH
        + DSDW G    R+ T G++      N I W++K+Q++V+ SST+A+Y  L     +  W++ LL  +++ L+    +  DN   +S+A+NP  H R KH
Subjt:  FCDSDWIGDTSYRRPTYGFI-AFLGSNPISWSSKKQSTVSRSSTKAQYCCLATTTADLYWIRQLLFDLHVPLKTSPTLLCDNVSAVSLAHNPIFHARTKH

Query:  IEIDYHFVREKVLRKDISICYISSNNQLADILTKPLLSPTFLHLRDKL-LTQPESS
        I+I YHF RE+V    I + YI + NQLADI TKPL +  F+ LRDKL L Q + S
Subjt:  IEIDYHFVREKVLRKDISICYISSNNQLADILTKPLLSPTFLHLRDKL-LTQPESS

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-943.2e-2036.03Show/hide
Query:  LQTFCDSDWIGDTSYRRPTYGFIAFLGSNPISWSSKKQSTVSRSSTKAQYCCLATTTADLYWIRQLLFDLHVPLKTSPTLLCDNVSAVSLAHNPIFHART
        L+ + D+D  GD   R+ + G++       ISW SK Q  V+ S+T+A+Y     T  ++ W+++ L +L +  K    + CD+ SA+ L+ N ++HART
Subjt:  LQTFCDSDWIGDTSYRRPTYGFIAFLGSNPISWSSKKQSTVSRSSTKAQYCCLATTTADLYWIRQLLFDLHVPLKTSPTLLCDNVSAVSLAHNPIFHART

Query:  KHIEIDYHFVREKVLRKDISICYISSNNQLADILTK
        KHI++ YH++RE V  + + +  IS+N   AD+LTK
Subjt:  KHIEIDYHFVREKVLRKDISICYISSNNQLADILTK

P92519 Uncharacterized mitochondrial protein AtMg008104.0e-1557.35Show/hide
Query:  QKGSFSLQTFCDSDWIGDTSYRRPTYGFIAFLGSNPISWSSKKQSTVSRSSTKAQYCCLATTTADLYW
        +    ++Q FCDSDW G TS RR T GF  FLG N ISWS+K+Q TVSRSST+ +Y  LA T A+L W
Subjt:  QKGSFSLQTFCDSDWIGDTSYRRPTYGFIAFLGSNPISWSSKKQSTVSRSSTKAQYCCLATTTADLYW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE13.9e-3445.75Show/hide
Query:  SFSLQTFCDSDWIGDTSYRRPTYGFIAFLGSNPISWSSKKQSTVSRSSTKAQYCCLATTTADLYWIRQLLFDLHVPLKTSPTLLCDNVSAVSLAHNPIFH
        + SL  + D+DW GD      T G+I +LG +PISWSSKKQ  V RSST+A+Y  +A T++++ WI  LL +L + L   P + CDNV A  L  NP+FH
Subjt:  SFSLQTFCDSDWIGDTSYRRPTYGFIAFLGSNPISWSSKKQSTVSRSSTKAQYCCLATTTADLYWIRQLLFDLHVPLKTSPTLLCDNVSAVSLAHNPIFH

Query:  ARTKHIEIDYHFVREKVLRKDISICYISSNNQLADILTKPLLSPTFLHLRDKL
        +R KHI IDYHF+R +V    + + ++S+++QLAD LTKPL    F +   K+
Subjt:  ARTKHIEIDYHFVREKVLRKDISICYISSNNQLADILTKPLLSPTFLHLRDKL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.3e-3446.41Show/hide
Query:  SFSLQTFCDSDWIGDTSYRRPTYGFIAFLGSNPISWSSKKQSTVSRSSTKAQYCCLATTTADLYWIRQLLFDLHVPLKTSPTLLCDNVSAVSLAHNPIFH
        + SL  + D+DW GDT     T G+I +LG +PISWSSKKQ  V RSST+A+Y  +A T+++L WI  LL +L + L   P + CDNV A  L  NP+FH
Subjt:  SFSLQTFCDSDWIGDTSYRRPTYGFIAFLGSNPISWSSKKQSTVSRSSTKAQYCCLATTTADLYWIRQLLFDLHVPLKTSPTLLCDNVSAVSLAHNPIFH

Query:  ARTKHIEIDYHFVREKVLRKDISICYISSNNQLADILTKPLLSPTFLHLRDKL
        +R KHI +DYHF+R +V    + + ++S+++QLAD LTKPL    F +   K+
Subjt:  ARTKHIEIDYHFVREKVLRKDISICYISSNNQLADILTKPLLSPTFLHLRDKL

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 83.2e-2337.66Show/hide
Query:  KGSFSLQTFCDSDWIGDTSYRRPTYGFIAFLGSNPISWSSKKQSTVSRSSTKAQYCCLATTTADLYWIRQLLFDLHVPLKTSPTLLCDNVSAVSLAHNPI
        +    LQ F D+ +      RR T G+  FLG++ ISW SKKQ  VS+SS +A+Y  L+  T ++ W+ Q   +L +PL     L CDN +A+ +A N +
Subjt:  KGSFSLQTFCDSDWIGDTSYRRPTYGFIAFLGSNPISWSSKKQSTVSRSSTKAQYCCLATTTADLYWIRQLLFDLHVPLKTSPTLLCDNVSAVSLAHNPI

Query:  FHARTKHIEIDYHFVREK-VLRKDISICYISSNNQ--LADILTKPLLSPTFLHL
        FH RTKHIE D H VRE+ V +  +S  + + + Q    + L+ P+L  T +++
Subjt:  FHARTKHIEIDYHFVREK-VLRKDISICYISSNNQ--LADILTKPLLSPTFLHL

ATMG00810.1 DNA/RNA polymerases superfamily protein2.9e-1657.35Show/hide
Query:  QKGSFSLQTFCDSDWIGDTSYRRPTYGFIAFLGSNPISWSSKKQSTVSRSSTKAQYCCLATTTADLYW
        +    ++Q FCDSDW G TS RR T GF  FLG N ISWS+K+Q TVSRSST+ +Y  LA T A+L W
Subjt:  QKGSFSLQTFCDSDWIGDTSYRRPTYGFIAFLGSNPISWSSKKQSTVSRSSTKAQYCCLATTTADLYW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTTCAAAAAGGTTCGTTCTCTCTACAAACCTTTTGTGATTCTGATTGGATAGGTGATACATCTTATCGACGTCCTACCTACGGCTTCATCGCCTTCCTCGGTTC
TAATCCAATATCTTGGTCTTCTAAAAAGCAATCTACAGTCTCTCGTTCCTCCACAAAAGCACAATATTGTTGCCTTGCCACTACTACTGCCGATCTTTACTGGATTCGAC
AGCTTCTATTTGATCTCCATGTTCCTCTTAAGACATCACCAACATTATTGTGTGATAATGTTTCCGCTGTATCTCTGGCTCATAATCCAATTTTTCATGCTCGCACCAAA
CACATTGAAATTGATTATCACTTTGTTCGGGAAAAAGTTCTTCGCAAAGACATCTCCATCTGTTACATCTCTTCCAACAACCAACTTGCTGATATTCTCACCAAGCCACT
CCTATCTCCTACATTCCTTCACCTTCGAGACAAACTACTGACTCAACCTGAGTCATCCGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATTTCAAAAAGGTTCGTTCTCTCTACAAACCTTTTGTGATTCTGATTGGATAGGTGATACATCTTATCGACGTCCTACCTACGGCTTCATCGCCTTCCTCGGTTC
TAATCCAATATCTTGGTCTTCTAAAAAGCAATCTACAGTCTCTCGTTCCTCCACAAAAGCACAATATTGTTGCCTTGCCACTACTACTGCCGATCTTTACTGGATTCGAC
AGCTTCTATTTGATCTCCATGTTCCTCTTAAGACATCACCAACATTATTGTGTGATAATGTTTCCGCTGTATCTCTGGCTCATAATCCAATTTTTCATGCTCGCACCAAA
CACATTGAAATTGATTATCACTTTGTTCGGGAAAAAGTTCTTCGCAAAGACATCTCCATCTGTTACATCTCTTCCAACAACCAACTTGCTGATATTCTCACCAAGCCACT
CCTATCTCCTACATTCCTTCACCTTCGAGACAAACTACTGACTCAACCTGAGTCATCCGTTTGA
Protein sequenceShow/hide protein sequence
MKFQKGSFSLQTFCDSDWIGDTSYRRPTYGFIAFLGSNPISWSSKKQSTVSRSSTKAQYCCLATTTADLYWIRQLLFDLHVPLKTSPTLLCDNVSAVSLAHNPIFHARTK
HIEIDYHFVREKVLRKDISICYISSNNQLADILTKPLLSPTFLHLRDKLLTQPESSV