; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc07g0189461 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc07g0189461
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTy1-copia retrotransposon protein
Genome locationCMiso1.1chr07:8222077..8222724
RNA-Seq ExpressionCmc07g0189461
SyntenyCmc07g0189461
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056672.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]2.5e-10788.84Show/hide
Query:  MYLINYTRRDIAYVVSRLSRYTHNLDRYHWDALHYLLRYLKGTINYCLHFNKFSVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGVISWKFAKQTCIARS
        MYL+NYTR DIAY VSRLSRYTHN +RYHWD LH+LLRYLKGTI+YCLHFNKF VVLEGYCDANWVTDNDEVNSTSGYVFLLGGG ISWK  KQTCIARS
Subjt:  MYLINYTRRDIAYVVSRLSRYTHNLDRYHWDALHYLLRYLKGTINYCLHFNKFSVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGVISWKFAKQTCIARS

Query:  TMESEFIALKLAEQEAEWIKNLLGDIPLWGTSVPVSIQCDSQAAICTAKNNVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRFKKNLANPLTKGLTRKVV
        TMESEFI L+LA QEAEWIKNLLGD+PLWGTSVPVSIQCDSQAAICTAKN+VYNGK+RHIRLRHAVVKQLLKEGTI LEFVR +KNLANPLTKGLTRK+V
Subjt:  TMESEFIALKLAEQEAEWIKNLLGDIPLWGTSVPVSIQCDSQAAICTAKNNVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRFKKNLANPLTKGLTRKVV

Query:  LDFSVNMGLKPFGDP
        LD S+NMGLKPFGDP
Subjt:  LDFSVNMGLKPFGDP

KAA0056761.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]7.3e-10788.84Show/hide
Query:  MYLINYTRRDIAYVVSRLSRYTHNLDRYHWDALHYLLRYLKGTINYCLHFNKFSVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGVISWKFAKQTCIARS
        MYL+NYTR DIAY VSRLSRYTHN +RYHWDAL +LLRYLKGTI+YCLHF KF  VLEGYCDANWVTDNDEVNSTSGYVFLLGGG ISWK  KQTCIARS
Subjt:  MYLINYTRRDIAYVVSRLSRYTHNLDRYHWDALHYLLRYLKGTINYCLHFNKFSVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGVISWKFAKQTCIARS

Query:  TMESEFIALKLAEQEAEWIKNLLGDIPLWGTSVPVSIQCDSQAAICTAKNNVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRFKKNLANPLTKGLTRKVV
        TMESEFIAL+LA QEAEWIKNLLGD+PLWGTSVPVSIQCDSQAAICTAKN+VYNGKSRH+RLRHAVVKQLLKEGTISLEFVR +KNLA+PLTKGLTRK+V
Subjt:  TMESEFIALKLAEQEAEWIKNLLGDIPLWGTSVPVSIQCDSQAAICTAKNNVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRFKKNLANPLTKGLTRKVV

Query:  LDFSVNMGLKPFGDP
        LD SVNMGLKPFGDP
Subjt:  LDFSVNMGLKPFGDP

TYK04394.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]7.3e-10788.84Show/hide
Query:  MYLINYTRRDIAYVVSRLSRYTHNLDRYHWDALHYLLRYLKGTINYCLHFNKFSVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGVISWKFAKQTCIARS
        MYL+NYTR DIAY VSRLSRYTHN +RYHWDAL +LLRYLKGTI+YCLHF KF  VLEGYCDANWVTDNDEVNSTSGYVFLLGGG ISWK  KQTCIARS
Subjt:  MYLINYTRRDIAYVVSRLSRYTHNLDRYHWDALHYLLRYLKGTINYCLHFNKFSVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGVISWKFAKQTCIARS

Query:  TMESEFIALKLAEQEAEWIKNLLGDIPLWGTSVPVSIQCDSQAAICTAKNNVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRFKKNLANPLTKGLTRKVV
        TMESEFIAL+LA QEAEWIKNLLGD+PLWGTSVPVSIQCDSQAAICTAKN+VYNGKSRH+RLRHAVVKQLLKEGTISLEFVR +KNLA+PLTKGLTRK+V
Subjt:  TMESEFIALKLAEQEAEWIKNLLGDIPLWGTSVPVSIQCDSQAAICTAKNNVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRFKKNLANPLTKGLTRKVV

Query:  LDFSVNMGLKPFGDP
        LD SVNMGLKPFGDP
Subjt:  LDFSVNMGLKPFGDP

TYK23349.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]1.9e-10789.77Show/hide
Query:  MYLINYTRRDIAYVVSRLSRYTHNLDRYHWDALHYLLRYLKGTINYCLHFNKFSVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGVISWKFAKQTCIARS
        MYL+NYTR DIAYVVSRLSRYTHN +RYHWDAL +LLRYLKGTI+YCLHF KF  VLEGYCDANWVTDNDEVNSTSGYVFLLGGG ISWK  KQTCIARS
Subjt:  MYLINYTRRDIAYVVSRLSRYTHNLDRYHWDALHYLLRYLKGTINYCLHFNKFSVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGVISWKFAKQTCIARS

Query:  TMESEFIALKLAEQEAEWIKNLLGDIPLWGTSVPVSIQCDSQAAICTAKNNVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRFKKNLANPLTKGLTRKVV
        TMESEFIAL+LA QEAEWIKNLLGD+PLWGTSVPVSIQCDSQAAICTAKN+VYNGKSRHIRLRHAVVKQLLKEGTISLEFVR +KNLA+PLTKGLTRK+V
Subjt:  TMESEFIALKLAEQEAEWIKNLLGDIPLWGTSVPVSIQCDSQAAICTAKNNVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRFKKNLANPLTKGLTRKVV

Query:  LDFSVNMGLKPFGDP
        LD SVNMGLKPFGDP
Subjt:  LDFSVNMGLKPFGDP

TYK26791.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]3.3e-10789.3Show/hide
Query:  MYLINYTRRDIAYVVSRLSRYTHNLDRYHWDALHYLLRYLKGTINYCLHFNKFSVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGVISWKFAKQTCIARS
        MYL+NYTR DIAY VSRLSRYTHN +RYHWDAL +LLRYLKGTI+YCLHF KF  VLEGYCDANWVTDNDEVNSTSGYVFLLGGG ISWK  KQTCIARS
Subjt:  MYLINYTRRDIAYVVSRLSRYTHNLDRYHWDALHYLLRYLKGTINYCLHFNKFSVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGVISWKFAKQTCIARS

Query:  TMESEFIALKLAEQEAEWIKNLLGDIPLWGTSVPVSIQCDSQAAICTAKNNVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRFKKNLANPLTKGLTRKVV
        TMESEFIAL+LA QEAEWIKNLLGD+PLWGTSVPVSIQCDSQAAICTAKN+VYNGKSRHIRLRHAVVKQLLKEGTISLEFVR +KNLA+PLTKGLTRK+V
Subjt:  TMESEFIALKLAEQEAEWIKNLLGDIPLWGTSVPVSIQCDSQAAICTAKNNVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRFKKNLANPLTKGLTRKVV

Query:  LDFSVNMGLKPFGDP
        LD SVNMGLKPFGDP
Subjt:  LDFSVNMGLKPFGDP

TrEMBL top hitse value%identityAlignment
A0A5A7ULG5 Ty1-copia retrotransposon protein1.2e-10788.84Show/hide
Query:  MYLINYTRRDIAYVVSRLSRYTHNLDRYHWDALHYLLRYLKGTINYCLHFNKFSVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGVISWKFAKQTCIARS
        MYL+NYTR DIAY VSRLSRYTHN +RYHWD LH+LLRYLKGTI+YCLHFNKF VVLEGYCDANWVTDNDEVNSTSGYVFLLGGG ISWK  KQTCIARS
Subjt:  MYLINYTRRDIAYVVSRLSRYTHNLDRYHWDALHYLLRYLKGTINYCLHFNKFSVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGVISWKFAKQTCIARS

Query:  TMESEFIALKLAEQEAEWIKNLLGDIPLWGTSVPVSIQCDSQAAICTAKNNVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRFKKNLANPLTKGLTRKVV
        TMESEFI L+LA QEAEWIKNLLGD+PLWGTSVPVSIQCDSQAAICTAKN+VYNGK+RHIRLRHAVVKQLLKEGTI LEFVR +KNLANPLTKGLTRK+V
Subjt:  TMESEFIALKLAEQEAEWIKNLLGDIPLWGTSVPVSIQCDSQAAICTAKNNVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRFKKNLANPLTKGLTRKVV

Query:  LDFSVNMGLKPFGDP
        LD S+NMGLKPFGDP
Subjt:  LDFSVNMGLKPFGDP

A0A5D3C5T2 Ty1-copia retrotransposon protein3.5e-10788.84Show/hide
Query:  MYLINYTRRDIAYVVSRLSRYTHNLDRYHWDALHYLLRYLKGTINYCLHFNKFSVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGVISWKFAKQTCIARS
        MYL+NYTR DIAY VSRLSRYTHN +RYHWDAL +LLRYLKGTI+YCLHF KF  VLEGYCDANWVTDNDEVNSTSGYVFLLGGG ISWK  KQTCIARS
Subjt:  MYLINYTRRDIAYVVSRLSRYTHNLDRYHWDALHYLLRYLKGTINYCLHFNKFSVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGVISWKFAKQTCIARS

Query:  TMESEFIALKLAEQEAEWIKNLLGDIPLWGTSVPVSIQCDSQAAICTAKNNVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRFKKNLANPLTKGLTRKVV
        TMESEFIAL+LA QEAEWIKNLLGD+PLWGTSVPVSIQCDSQAAICTAKN+VYNGKSRH+RLRHAVVKQLLKEGTISLEFVR +KNLA+PLTKGLTRK+V
Subjt:  TMESEFIALKLAEQEAEWIKNLLGDIPLWGTSVPVSIQCDSQAAICTAKNNVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRFKKNLANPLTKGLTRKVV

Query:  LDFSVNMGLKPFGDP
        LD SVNMGLKPFGDP
Subjt:  LDFSVNMGLKPFGDP

A0A5D3C7Z8 Ty1-copia retrotransposon protein3.5e-10789.3Show/hide
Query:  MYLINYTRRDIAYVVSRLSRYTHNLDRYHWDALHYLLRYLKGTINYCLHFNKFSVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGVISWKFAKQTCIARS
        MYL+NYTR DIAY VSRLSRYTHN +RYHWDAL +LLRYLKGTI+YCLHFNKF  VLEGYCDANWVTDNDEVNSTSGYVFLLGGG ISWK  KQTCIARS
Subjt:  MYLINYTRRDIAYVVSRLSRYTHNLDRYHWDALHYLLRYLKGTINYCLHFNKFSVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGVISWKFAKQTCIARS

Query:  TMESEFIALKLAEQEAEWIKNLLGDIPLWGTSVPVSIQCDSQAAICTAKNNVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRFKKNLANPLTKGLTRKVV
        TMESEFIAL+LA QEAEWIKNLLGD+PLWGTSVPVSIQCDSQAAICTAKN+VYNGKSRHIRLRHAVVKQLLKEGTISLEFVR +KNLA+PLTKGLTRK+V
Subjt:  TMESEFIALKLAEQEAEWIKNLLGDIPLWGTSVPVSIQCDSQAAICTAKNNVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRFKKNLANPLTKGLTRKVV

Query:  LDFSVNMGLKPFGDP
        LD SVNM LKPFGDP
Subjt:  LDFSVNMGLKPFGDP

A0A5D3DJE2 Ty1-copia retrotransposon protein9.3e-10889.77Show/hide
Query:  MYLINYTRRDIAYVVSRLSRYTHNLDRYHWDALHYLLRYLKGTINYCLHFNKFSVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGVISWKFAKQTCIARS
        MYL+NYTR DIAYVVSRLSRYTHN +RYHWDAL +LLRYLKGTI+YCLHF KF  VLEGYCDANWVTDNDEVNSTSGYVFLLGGG ISWK  KQTCIARS
Subjt:  MYLINYTRRDIAYVVSRLSRYTHNLDRYHWDALHYLLRYLKGTINYCLHFNKFSVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGVISWKFAKQTCIARS

Query:  TMESEFIALKLAEQEAEWIKNLLGDIPLWGTSVPVSIQCDSQAAICTAKNNVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRFKKNLANPLTKGLTRKVV
        TMESEFIAL+LA QEAEWIKNLLGD+PLWGTSVPVSIQCDSQAAICTAKN+VYNGKSRHIRLRHAVVKQLLKEGTISLEFVR +KNLA+PLTKGLTRK+V
Subjt:  TMESEFIALKLAEQEAEWIKNLLGDIPLWGTSVPVSIQCDSQAAICTAKNNVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRFKKNLANPLTKGLTRKVV

Query:  LDFSVNMGLKPFGDP
        LD SVNMGLKPFGDP
Subjt:  LDFSVNMGLKPFGDP

A0A5D3DSQ3 Ty1-copia retrotransposon protein1.6e-10789.3Show/hide
Query:  MYLINYTRRDIAYVVSRLSRYTHNLDRYHWDALHYLLRYLKGTINYCLHFNKFSVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGVISWKFAKQTCIARS
        MYL+NYTR DIAY VSRLSRYTHN +RYHWDAL +LLRYLKGTI+YCLHF KF  VLEGYCDANWVTDNDEVNSTSGYVFLLGGG ISWK  KQTCIARS
Subjt:  MYLINYTRRDIAYVVSRLSRYTHNLDRYHWDALHYLLRYLKGTINYCLHFNKFSVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGVISWKFAKQTCIARS

Query:  TMESEFIALKLAEQEAEWIKNLLGDIPLWGTSVPVSIQCDSQAAICTAKNNVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRFKKNLANPLTKGLTRKVV
        TMESEFIAL+LA QEAEWIKNLLGD+PLWGTSVPVSIQCDSQAAICTAKN+VYNGKSRHIRLRHAVVKQLLKEGTISLEFVR +KNLA+PLTKGLTRK+V
Subjt:  TMESEFIALKLAEQEAEWIKNLLGDIPLWGTSVPVSIQCDSQAAICTAKNNVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRFKKNLANPLTKGLTRKVV

Query:  LDFSVNMGLKPFGDP
        LD SVNMGLKPFGDP
Subjt:  LDFSVNMGLKPFGDP

SwissProt top hitse value%identityAlignment
P04146 Copia protein6.8e-2332.39Show/hide
Query:  MYLINYTRRDIAYVVSRLSRYTHNLDRYHWDALHYLLRYLKGTINYCLHFNK---FSVVLEGYCDANWVTDNDEVNSTSGYVF-LLGGGVISWKFAKQTC
        MY++  TR D+   V+ LSRY+   +   W  L  +LRYLKGTI+  L F K   F   + GY D++W     +  ST+GY+F +    +I W   +Q  
Subjt:  MYLINYTRRDIAYVVSRLSRYTHNLDRYHWDALHYLLRYLKGTINYCLHFNK---FSVVLEGYCDANWVTDNDEVNSTSGYVF-LLGGGVISWKFAKQTC

Query:  IARSTMESEFIALKLAEQEAEWIKNLLGDIPLWGTSVPVSIQCDSQAAICTAKNNVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRFKKNLANPLTKGLT
        +A S+ E+E++AL  A +EA W+K LL  I +     P+ I  D+Q  I  A N   + +++HI +++   ++ ++   I LE++  +  LA+  TK L 
Subjt:  IARSTMESEFIALKLAEQEAEWIKNLLGDIPLWGTSVPVSIQCDSQAAICTAKNNVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRFKKNLANPLTKGLT

Query:  RKVVLDFSVNMGL
            ++    +GL
Subjt:  RKVVLDFSVNMGL

P0CV72 Secreted RxLR effector protein 1619.1e-2044.17Show/hide
Query:  MYLINYTRRDIAYVVSRLSRYTHNLDRYHWDALHYLLRYLKGTINYCLHFNKFSVV-LEGYCDANWVTDNDEVNSTSGYVFLLGGGVISWKFAKQTCIAR
        MYL+  TR D+A  V  LS++  +    HW AL  +LRYL+ T  Y L F +     L GY DA+W  D +   STSGY+F L GG +SW+  KQ  +A 
Subjt:  MYLINYTRRDIAYVVSRLSRYTHNLDRYHWDALHYLLRYLKGTINYCLHFNKFSVV-LEGYCDANWVTDNDEVNSTSGYVFLLGGGVISWKFAKQTCIAR

Query:  STMESEFIALKLAEQEAEWI
        S+ E E++AL  A QEA W+
Subjt:  STMESEFIALKLAEQEAEWI

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-946.1e-3236.55Show/hide
Query:  MYLINYTRRDIAYVVSRLSRYTHNLDRYHWDALHYLLRYLKGTINYCLHFNKFSVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGVISWKFAKQTCIARS
        MY +  TR DIA+ V  +SR+  N  + HW+A+ ++LRYL+GT   CL F     +L+GY DA+   D D   S++GY+F   GG ISW+   Q C+A S
Subjt:  MYLINYTRRDIAYVVSRLSRYTHNLDRYHWDALHYLLRYLKGTINYCLHFNKFSVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGVISWKFAKQTCIARS

Query:  TMESEFIALKLAEQEAEWIKNLLGDIPLWGTSVPVSIQCDSQAAICTAKNNVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRFKKNLANPLTKGLTR
        T E+E+IA     +E  W+K  L ++ L      V   CDSQ+AI  +KN++Y+ +++HI +R+  +++++ + ++ +  +   +N A+ LTK + R
Subjt:  TMESEFIALKLAEQEAEWIKNLLGDIPLWGTSVPVSIQCDSQAAICTAKNNVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRFKKNLANPLTKGLTR

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE19.1e-2834.15Show/hide
Query:  YTRRDIAYVVSRLSRYTHNLDRYHWDALHYLLRYLKGTINYCLHFNKFSVV-LEGYCDANWVTDNDEVNSTSGYVFLLGGGVISWKFAKQTCIARSTMES
        +TR DI+Y V+RLS++ H     H  AL  +LRYL GT N+ +   K + + L  Y DA+W  D D+  ST+GY+  LG   ISW   KQ  + RS+ E+
Subjt:  YTRRDIAYVVSRLSRYTHNLDRYHWDALHYLLRYLKGTINYCLHFNKFSVV-LEGYCDANWVTDNDEVNSTSGYVFLLGGGVISWKFAKQTCIARSTMES

Query:  EFIALKLAEQEAEWIKNLLGDIPLWGTSVPVSIQCDSQAAICTAKNNVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRFKKNLANPLTKGLTRKVVLDFS
        E+ ++     E +WI +LL ++ +  T  PV I CD+  A     N V++ + +HI + +  ++  ++ G + +  V     LA+ LTK L+R    +F+
Subjt:  EFIALKLAEQEAEWIKNLLGDIPLWGTSVPVSIQCDSQAAICTAKNNVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRFKKNLANPLTKGLTRKVVLDFS

Query:  VNMGL
          +G+
Subjt:  VNMGL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.4e-2834.63Show/hide
Query:  YTRRDIAYVVSRLSRYTHNLDRYHWDALHYLLRYLKGTINYCLHFNKFSVV-LEGYCDANWVTDNDEVNSTSGYVFLLGGGVISWKFAKQTCIARSTMES
        +TR D++Y V+RLS+Y H     HW+AL  +LRYL GT ++ +   K + + L  Y DA+W  D D+  ST+GY+  LG   ISW   KQ  + RS+ E+
Subjt:  YTRRDIAYVVSRLSRYTHNLDRYHWDALHYLLRYLKGTINYCLHFNKFSVV-LEGYCDANWVTDNDEVNSTSGYVFLLGGGVISWKFAKQTCIARSTMES

Query:  EFIALKLAEQEAEWIKNLLGDIPLWGTSVPVSIQCDSQAAICTAKNNVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRFKKNLANPLTKGLTRKVVLDFS
        E+ ++     E +WI +LL ++ +  +  PV I CD+  A     N V++ + +HI L +  ++  ++ G + +  V     LA+ LTK L+R    +FS
Subjt:  EFIALKLAEQEAEWIKNLLGDIPLWGTSVPVSIQCDSQAAICTAKNNVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRFKKNLANPLTKGLTRKVVLDFS

Query:  VNMGL
          +G+
Subjt:  VNMGL

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 82.2e-2130.19Show/hide
Query:  MYLINYTRRDIAYVVSRLSRYTHNLDRYHWDALHYLLRYLKGTINYCLHF-NKFSVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGVISWKFAKQTCIAR
        MYL   TR DI++ V++LS+++      H  A+  +L Y+KGT+   L + ++  + L+ + DA++ +  D   ST+GY   LG  +ISWK  KQ  +++
Subjt:  MYLINYTRRDIAYVVSRLSRYTHNLDRYHWDALHYLLRYLKGTINYCLHF-NKFSVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGVISWKFAKQTCIAR

Query:  STMESEFIALKLAEQEAEWIKNLLGDIPLWGTSVPVSIQCDSQAAICTAKNNVYNGKSRHIRLR-HAVVKQLLKEGTISLEFVRFKK-----NLANPLTK
        S+ E+E+ AL  A  E  W+     ++ L   S P  + CD+ AAI  A N V++ +++HI    H+V ++ + + T+S  F  + +        +P+ +
Subjt:  STMESEFIALKLAEQEAEWIKNLLGDIPLWGTSVPVSIQCDSQAAICTAKNNVYNGKSRHIRLR-HAVVKQLLKEGTISLEFVRFKK-----NLANPLTK

Query:  GLTRKVVLDFSV
        G    +V  F +
Subjt:  GLTRKVVLDFSV

ATMG00240.1 Gag-Pol-related retrotransposon family protein3.2e-0430.12Show/hide
Query:  MYLINYTRRDIAYVVSRLSRYTHNLDRYHWDALHYLLRYLKGTINYCLHFNKFS-VVLEGYCDANWVTDNDEVNSTSGYVFLL
        MYL   TR D+ + V+RLS+++         A++ +L Y+KGT+   L ++  S + L+ + D++W +  D   S +G+  L+
Subjt:  MYLINYTRRDIAYVVSRLSRYTHNLDRYHWDALHYLLRYLKGTINYCLHFNKFS-VVLEGYCDANWVTDNDEVNSTSGYVFLL

ATMG00810.1 DNA/RNA polymerases superfamily protein5.9e-1434.48Show/hide
Query:  INYTRRDIAYVVSRLSRYTHNLDRYHWDALHYLLRYLKGTINYCLHFNKFSVV-LEGYCDANWVTDNDEVNSTSGYVFLLGGGVISWKFAKQTCIARSTM
        +  TR DI+Y V+ + +  H      +D L  +LRY+KGTI + L+ +K S + ++ +CD++W        ST+G+   LG  +ISW   +Q  ++RS+ 
Subjt:  INYTRRDIAYVVSRLSRYTHNLDRYHWDALHYLLRYLKGTINYCLHFNKFSVV-LEGYCDANWVTDNDEVNSTSGYVFLLGGGVISWKFAKQTCIARSTM

Query:  ESEFIALKLAEQEAEW
        E+E+ AL L   E  W
Subjt:  ESEFIALKLAEQEAEW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTTAATAAATTATACTAGACGTGATATTGCATATGTTGTCAGTAGATTGAGTAGATATACACATAATCTTGATAGATACCACTGGGATGCTTTACACTATCTATT
GAGATATCTTAAAGGGACGATAAATTACTGTTTGCACTTCAACAAATTTTCTGTCGTATTAGAAGGATATTGTGATGCAAACTGGGTCACAGATAATGATGAGGTTAACT
CCACTAGTGGGTATGTATTTTTGCTCGGAGGTGGAGTAATATCTTGGAAGTTTGCAAAACAGACTTGTATAGCTAGATCCACGATGGAATCCGAGTTTATAGCATTAAAG
TTGGCAGAACAAGAGGCTGAGTGGATAAAAAATCTACTAGGAGATATACCATTGTGGGGGACATCTGTACCTGTGTCCATACAGTGTGATTCACAAGCTGCGATATGTAC
TGCCAAGAACAATGTTTATAATGGTAAAAGTAGACATATACGTCTTAGGCATGCAGTCGTAAAACAACTGCTAAAGGAAGGAACCATTTCCTTGGAATTTGTTCGATTTA
AGAAGAACTTGGCTAATCCTCTAACCAAAGGACTAACAAGGAAAGTGGTTTTAGATTTCTCTGTGAACATGGGCCTAAAGCCATTCGGTGATCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGTATTTAATAAATTATACTAGACGTGATATTGCATATGTTGTCAGTAGATTGAGTAGATATACACATAATCTTGATAGATACCACTGGGATGCTTTACACTATCTATT
GAGATATCTTAAAGGGACGATAAATTACTGTTTGCACTTCAACAAATTTTCTGTCGTATTAGAAGGATATTGTGATGCAAACTGGGTCACAGATAATGATGAGGTTAACT
CCACTAGTGGGTATGTATTTTTGCTCGGAGGTGGAGTAATATCTTGGAAGTTTGCAAAACAGACTTGTATAGCTAGATCCACGATGGAATCCGAGTTTATAGCATTAAAG
TTGGCAGAACAAGAGGCTGAGTGGATAAAAAATCTACTAGGAGATATACCATTGTGGGGGACATCTGTACCTGTGTCCATACAGTGTGATTCACAAGCTGCGATATGTAC
TGCCAAGAACAATGTTTATAATGGTAAAAGTAGACATATACGTCTTAGGCATGCAGTCGTAAAACAACTGCTAAAGGAAGGAACCATTTCCTTGGAATTTGTTCGATTTA
AGAAGAACTTGGCTAATCCTCTAACCAAAGGACTAACAAGGAAAGTGGTTTTAGATTTCTCTGTGAACATGGGCCTAAAGCCATTCGGTGATCCATAG
Protein sequenceShow/hide protein sequence
MYLINYTRRDIAYVVSRLSRYTHNLDRYHWDALHYLLRYLKGTINYCLHFNKFSVVLEGYCDANWVTDNDEVNSTSGYVFLLGGGVISWKFAKQTCIARSTMESEFIALK
LAEQEAEWIKNLLGDIPLWGTSVPVSIQCDSQAAICTAKNNVYNGKSRHIRLRHAVVKQLLKEGTISLEFVRFKKNLANPLTKGLTRKVVLDFSVNMGLKPFGDP