| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0046359.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.1e-99 | 74.6 | Show/hide |
Query: MIRFLLNQYTNLFDTPKALPSKRLIDHRILTLPEQKPINVRPYKYDHAQKEEIEKLVAEMLQAGIIKPNHSPFSSPMLLVKKKDGGWRFCVDYQKLNKIT
MI+FLL+QY+++F++P LP KR+IDHRILTLP QKPINVRPYKY H QKEEIEKLV EMLQ GII+P+HSPFSSP+LLVKK DGGWRFCVDY+KLNKIT
Subjt: MIRFLLNQYTNLFDTPKALPSKRLIDHRILTLPEQKPINVRPYKYDHAQKEEIEKLVAEMLQAGIIKPNHSPFSSPMLLVKKKDGGWRFCVDYQKLNKIT
Query: IADKFLIPVIEELLDELHGATIFSKLDLKSGYHQIRMKDEDIEKTAFRTHEGHYEFLVMPFGLMNTPATFQSLMNQ------------------------
IADKF IPVIEELLDELHGAT+FSKLDLKSGYHQIRMK+EDIEKTAFRTHEGHYEF+VMPFGL N PATFQSLMNQ
Subjt: IADKFLIPVIEELLDELHGATIFSKLDLKSGYHQIRMKDEDIEKTAFRTHEGHYEFLVMPFGLMNTPATFQSLMNQ------------------------
Query: -----HLGIVFAILRDNQLYANRKKCVFAHSQIQYLGHNISKKGMEVD
HLG+VFA LRDNQLYANRKKCVFAHSQI YLGH ISK G+E D
Subjt: -----HLGIVFAILRDNQLYANRKKCVFAHSQIQYLGHNISKKGMEVD
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| KAA0059481.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.5e-99 | 74.6 | Show/hide |
Query: MIRFLLNQYTNLFDTPKALPSKRLIDHRILTLPEQKPINVRPYKYDHAQKEEIEKLVAEMLQAGIIKPNHSPFSSPMLLVKKKDGGWRFCVDYQKLNKIT
MI+FLL+QY+++F++P LP KR+IDHRILTLP QKPINVRPYKY H QKEEIEKLV EMLQ GII+P+HSPFSSP+LLVKKKDGGWRFCVDY+KLNKIT
Subjt: MIRFLLNQYTNLFDTPKALPSKRLIDHRILTLPEQKPINVRPYKYDHAQKEEIEKLVAEMLQAGIIKPNHSPFSSPMLLVKKKDGGWRFCVDYQKLNKIT
Query: IADKFLIPVIEELLDELHGATIFSKLDLKSGYHQIRMKDEDIEKTAFRTHEGHYEFLVMPFGLMNTPATFQSLMNQ------------------------
IADKF IPVIEELLDELHGAT+FSKLDLKSGYHQIRMK+EDIEKTAFRTHEGHYEF+VMPFGL N PATFQS MNQ
Subjt: IADKFLIPVIEELLDELHGATIFSKLDLKSGYHQIRMKDEDIEKTAFRTHEGHYEFLVMPFGLMNTPATFQSLMNQ------------------------
Query: -----HLGIVFAILRDNQLYANRKKCVFAHSQIQYLGHNISKKGMEVD
HLG+VFA LRDNQLYANRKKCVFAHSQI YLGH ISK G+E D
Subjt: -----HLGIVFAILRDNQLYANRKKCVFAHSQIQYLGHNISKKGMEVD
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| KAA0065995.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 3.6e-101 | 75.4 | Show/hide |
Query: MIRFLLNQYTNLFDTPKALPSKRLIDHRILTLPEQKPINVRPYKYDHAQKEEIEKLVAEMLQAGIIKPNHSPFSSPMLLVKKKDGGWRFCVDYQKLNKIT
MI+FLLNQY+++FD P LP KR +DHRI T+P QKPINVRPYKY H QKEEIEKLV EMLQ GII+P+HSPFSSP+LLVKKKDGGWRFCVDY KLNKIT
Subjt: MIRFLLNQYTNLFDTPKALPSKRLIDHRILTLPEQKPINVRPYKYDHAQKEEIEKLVAEMLQAGIIKPNHSPFSSPMLLVKKKDGGWRFCVDYQKLNKIT
Query: IADKFLIPVIEELLDELHGATIFSKLDLKSGYHQIRMKDEDIEKTAFRTHEGHYEFLVMPFGLMNTPATFQSLMNQ------------------------
IADKF IPVIEELLDELHGAT+FSKLDLKSGYHQIRMK+EDIEKTAFRTHEGHYEF+VMPFGL N PATFQSLMNQ
Subjt: IADKFLIPVIEELLDELHGATIFSKLDLKSGYHQIRMKDEDIEKTAFRTHEGHYEFLVMPFGLMNTPATFQSLMNQ------------------------
Query: -----HLGIVFAILRDNQLYANRKKCVFAHSQIQYLGHNISKKGMEVD
HLG+VFAILRDNQLYANRKKCVFAHSQIQYLGH ISK G+E D
Subjt: -----HLGIVFAILRDNQLYANRKKCVFAHSQIQYLGHNISKKGMEVD
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| TYK21035.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 5.1e-100 | 74.6 | Show/hide |
Query: MIRFLLNQYTNLFDTPKALPSKRLIDHRILTLPEQKPINVRPYKYDHAQKEEIEKLVAEMLQAGIIKPNHSPFSSPMLLVKKKDGGWRFCVDYQKLNKIT
MI+FLL+QY+++F++P LP KR+IDHRILTLP QKPINVRPYKY H QKEEIEKLV EMLQ GII+P+HSPFSSP+LLVKKKDGGWRFCVDY+KLNKIT
Subjt: MIRFLLNQYTNLFDTPKALPSKRLIDHRILTLPEQKPINVRPYKYDHAQKEEIEKLVAEMLQAGIIKPNHSPFSSPMLLVKKKDGGWRFCVDYQKLNKIT
Query: IADKFLIPVIEELLDELHGATIFSKLDLKSGYHQIRMKDEDIEKTAFRTHEGHYEFLVMPFGLMNTPATFQSLMNQ------------------------
IADKF IPVIEELLDELHGAT+FSKLDLKSGYHQIRM++EDIEKTAFRTHEGHYEF+VMPFGL N PATFQSLMNQ
Subjt: IADKFLIPVIEELLDELHGATIFSKLDLKSGYHQIRMKDEDIEKTAFRTHEGHYEFLVMPFGLMNTPATFQSLMNQ------------------------
Query: -----HLGIVFAILRDNQLYANRKKCVFAHSQIQYLGHNISKKGMEVD
HLG+VFA LRDNQLYANRKKCVFAHSQI YLGH ISK G+E D
Subjt: -----HLGIVFAILRDNQLYANRKKCVFAHSQIQYLGHNISKKGMEVD
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| TYK28944.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 2.5e-99 | 74.6 | Show/hide |
Query: MIRFLLNQYTNLFDTPKALPSKRLIDHRILTLPEQKPINVRPYKYDHAQKEEIEKLVAEMLQAGIIKPNHSPFSSPMLLVKKKDGGWRFCVDYQKLNKIT
MI+FLL+QY+++F +P LP KR IDHRILTLP QKPINVRPYKY H QKEEIEKLV EMLQ GII+P+HSPFSSP+LLVKKKDGGWRFCVDY+KLNKIT
Subjt: MIRFLLNQYTNLFDTPKALPSKRLIDHRILTLPEQKPINVRPYKYDHAQKEEIEKLVAEMLQAGIIKPNHSPFSSPMLLVKKKDGGWRFCVDYQKLNKIT
Query: IADKFLIPVIEELLDELHGATIFSKLDLKSGYHQIRMKDEDIEKTAFRTHEGHYEFLVMPFGLMNTPATFQSLMNQ------------------------
IADKF IPVIEELLDELHGAT+FSKLDLKSGYHQIRM++EDIEKTAFRTHEGHYEF+VMPFGL N PATFQSLMNQ
Subjt: IADKFLIPVIEELLDELHGATIFSKLDLKSGYHQIRMKDEDIEKTAFRTHEGHYEFLVMPFGLMNTPATFQSLMNQ------------------------
Query: -----HLGIVFAILRDNQLYANRKKCVFAHSQIQYLGHNISKKGMEVD
HLG+VFA LRDNQLYANRKKCVFAHSQI YLGH ISK G+E D
Subjt: -----HLGIVFAILRDNQLYANRKKCVFAHSQIQYLGHNISKKGMEVD
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TYN3 Ty3/gypsy retrotransposon protein | 5.5e-100 | 74.6 | Show/hide |
Query: MIRFLLNQYTNLFDTPKALPSKRLIDHRILTLPEQKPINVRPYKYDHAQKEEIEKLVAEMLQAGIIKPNHSPFSSPMLLVKKKDGGWRFCVDYQKLNKIT
MI+FLL+QY+++F++P LP KR+IDHRILTLP QKPINVRPYKY H QKEEIEKLV EMLQ GII+P+HSPFSSP+LLVKK DGGWRFCVDY+KLNKIT
Subjt: MIRFLLNQYTNLFDTPKALPSKRLIDHRILTLPEQKPINVRPYKYDHAQKEEIEKLVAEMLQAGIIKPNHSPFSSPMLLVKKKDGGWRFCVDYQKLNKIT
Query: IADKFLIPVIEELLDELHGATIFSKLDLKSGYHQIRMKDEDIEKTAFRTHEGHYEFLVMPFGLMNTPATFQSLMNQ------------------------
IADKF IPVIEELLDELHGAT+FSKLDLKSGYHQIRMK+EDIEKTAFRTHEGHYEF+VMPFGL N PATFQSLMNQ
Subjt: IADKFLIPVIEELLDELHGATIFSKLDLKSGYHQIRMKDEDIEKTAFRTHEGHYEFLVMPFGLMNTPATFQSLMNQ------------------------
Query: -----HLGIVFAILRDNQLYANRKKCVFAHSQIQYLGHNISKKGMEVD
HLG+VFA LRDNQLYANRKKCVFAHSQI YLGH ISK G+E D
Subjt: -----HLGIVFAILRDNQLYANRKKCVFAHSQIQYLGHNISKKGMEVD
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| A0A5A7V194 Ty3/gypsy retrotransposon protein | 7.2e-100 | 74.6 | Show/hide |
Query: MIRFLLNQYTNLFDTPKALPSKRLIDHRILTLPEQKPINVRPYKYDHAQKEEIEKLVAEMLQAGIIKPNHSPFSSPMLLVKKKDGGWRFCVDYQKLNKIT
MI+FLL+QY+++F++P LP KR+IDHRILTLP QKPINVRPYKY H QKEEIEKLV EMLQ GII+P+HSPFSSP+LLVKKKDGGWRFCVDY+KLNKIT
Subjt: MIRFLLNQYTNLFDTPKALPSKRLIDHRILTLPEQKPINVRPYKYDHAQKEEIEKLVAEMLQAGIIKPNHSPFSSPMLLVKKKDGGWRFCVDYQKLNKIT
Query: IADKFLIPVIEELLDELHGATIFSKLDLKSGYHQIRMKDEDIEKTAFRTHEGHYEFLVMPFGLMNTPATFQSLMNQ------------------------
IADKF IPVIEELLDELHGAT+FSKLDLKSGYHQIRMK+EDIEKTAFRTHEGHYEF+VMPFGL N PATFQS MNQ
Subjt: IADKFLIPVIEELLDELHGATIFSKLDLKSGYHQIRMKDEDIEKTAFRTHEGHYEFLVMPFGLMNTPATFQSLMNQ------------------------
Query: -----HLGIVFAILRDNQLYANRKKCVFAHSQIQYLGHNISKKGMEVD
HLG+VFA LRDNQLYANRKKCVFAHSQI YLGH ISK G+E D
Subjt: -----HLGIVFAILRDNQLYANRKKCVFAHSQIQYLGHNISKKGMEVD
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| A0A5A7VJU2 Ty3/gypsy retrotransposon protein | 1.7e-101 | 75.4 | Show/hide |
Query: MIRFLLNQYTNLFDTPKALPSKRLIDHRILTLPEQKPINVRPYKYDHAQKEEIEKLVAEMLQAGIIKPNHSPFSSPMLLVKKKDGGWRFCVDYQKLNKIT
MI+FLLNQY+++FD P LP KR +DHRI T+P QKPINVRPYKY H QKEEIEKLV EMLQ GII+P+HSPFSSP+LLVKKKDGGWRFCVDY KLNKIT
Subjt: MIRFLLNQYTNLFDTPKALPSKRLIDHRILTLPEQKPINVRPYKYDHAQKEEIEKLVAEMLQAGIIKPNHSPFSSPMLLVKKKDGGWRFCVDYQKLNKIT
Query: IADKFLIPVIEELLDELHGATIFSKLDLKSGYHQIRMKDEDIEKTAFRTHEGHYEFLVMPFGLMNTPATFQSLMNQ------------------------
IADKF IPVIEELLDELHGAT+FSKLDLKSGYHQIRMK+EDIEKTAFRTHEGHYEF+VMPFGL N PATFQSLMNQ
Subjt: IADKFLIPVIEELLDELHGATIFSKLDLKSGYHQIRMKDEDIEKTAFRTHEGHYEFLVMPFGLMNTPATFQSLMNQ------------------------
Query: -----HLGIVFAILRDNQLYANRKKCVFAHSQIQYLGHNISKKGMEVD
HLG+VFAILRDNQLYANRKKCVFAHSQIQYLGH ISK G+E D
Subjt: -----HLGIVFAILRDNQLYANRKKCVFAHSQIQYLGHNISKKGMEVD
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| A0A5D3BBH7 Ty3/gypsy retrotransposon protein | 1.2e-99 | 74.6 | Show/hide |
Query: MIRFLLNQYTNLFDTPKALPSKRLIDHRILTLPEQKPINVRPYKYDHAQKEEIEKLVAEMLQAGIIKPNHSPFSSPMLLVKKKDGGWRFCVDYQKLNKIT
MI+FLL+QY+++F +P LP KR IDHRILTLP QKPINVRPYKY H QKEEIEKLV EMLQ GII+P+HSPFSSP+LLVKKKDGGWRFCVDY+KLNKIT
Subjt: MIRFLLNQYTNLFDTPKALPSKRLIDHRILTLPEQKPINVRPYKYDHAQKEEIEKLVAEMLQAGIIKPNHSPFSSPMLLVKKKDGGWRFCVDYQKLNKIT
Query: IADKFLIPVIEELLDELHGATIFSKLDLKSGYHQIRMKDEDIEKTAFRTHEGHYEFLVMPFGLMNTPATFQSLMNQ------------------------
IADKF IPVIEELLDELHGAT+FSKLDLKSGYHQIRM++EDIEKTAFRTHEGHYEF+VMPFGL N PATFQSLMNQ
Subjt: IADKFLIPVIEELLDELHGATIFSKLDLKSGYHQIRMKDEDIEKTAFRTHEGHYEFLVMPFGLMNTPATFQSLMNQ------------------------
Query: -----HLGIVFAILRDNQLYANRKKCVFAHSQIQYLGHNISKKGMEVD
HLG+VFA LRDNQLYANRKKCVFAHSQI YLGH ISK G+E D
Subjt: -----HLGIVFAILRDNQLYANRKKCVFAHSQIQYLGHNISKKGMEVD
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| A0A5D3E325 Ty3/gypsy retrotransposon protein | 2.5e-100 | 74.6 | Show/hide |
Query: MIRFLLNQYTNLFDTPKALPSKRLIDHRILTLPEQKPINVRPYKYDHAQKEEIEKLVAEMLQAGIIKPNHSPFSSPMLLVKKKDGGWRFCVDYQKLNKIT
MI+FLL+QY+++F++P LP KR+IDHRILTLP QKPINVRPYKY H QKEEIEKLV EMLQ GII+P+HSPFSSP+LLVKKKDGGWRFCVDY+KLNKIT
Subjt: MIRFLLNQYTNLFDTPKALPSKRLIDHRILTLPEQKPINVRPYKYDHAQKEEIEKLVAEMLQAGIIKPNHSPFSSPMLLVKKKDGGWRFCVDYQKLNKIT
Query: IADKFLIPVIEELLDELHGATIFSKLDLKSGYHQIRMKDEDIEKTAFRTHEGHYEFLVMPFGLMNTPATFQSLMNQ------------------------
IADKF IPVIEELLDELHGAT+FSKLDLKSGYHQIRM++EDIEKTAFRTHEGHYEF+VMPFGL N PATFQSLMNQ
Subjt: IADKFLIPVIEELLDELHGATIFSKLDLKSGYHQIRMKDEDIEKTAFRTHEGHYEFLVMPFGLMNTPATFQSLMNQ------------------------
Query: -----HLGIVFAILRDNQLYANRKKCVFAHSQIQYLGHNISKKGMEVD
HLG+VFA LRDNQLYANRKKCVFAHSQI YLGH ISK G+E D
Subjt: -----HLGIVFAILRDNQLYANRKKCVFAHSQIQYLGHNISKKGMEVD
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 1.1e-33 | 36.84 | Show/hide |
Query: YKYDHAQKEEIEKLVAEMLQAGIIKPNHSPFSSPMLLVKKKDGG-----WRFCVDYQKLNKITIADKFLIPVIEELLDELHGATIFSKLDLKSGYHQIRM
Y Y A ++E+E + +ML GII+ ++SP++SP+ +V KK +R +DY+KLN+IT+ D+ IP ++E+L +L F+ +DL G+HQI M
Subjt: YKYDHAQKEEIEKLVAEMLQAGIIKPNHSPFSSPMLLVKKKDGG-----WRFCVDYQKLNKITIADKFLIPVIEELLDELHGATIFSKLDLKSGYHQIRM
Query: KDEDIEKTAFRTHEGHYEFLVMPFGLMNTPATFQSLMN-----------------------------QHLGIVFAILRDNQLYANRKKCVFAHSQIQYLG
E + KTAF T GHYE+L MPFGL N PATFQ MN Q LG+VF L L KC F + +LG
Subjt: KDEDIEKTAFRTHEGHYEFLVMPFGLMNTPATFQSLMN-----------------------------QHLGIVFAILRDNQLYANRKKCVFAHSQIQYLG
Query: HNISKKGME
H ++ G++
Subjt: HNISKKGME
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 4.6e-35 | 35.46 | Show/hide |
Query: IRFLLNQYTNL-FDTPKALPSKRLIDHRILTLPEQKPINVRPYKYDHAQKEEIEKLVAEMLQAGIIKPNHSPFSSPMLLVKKKDGG-----WRFCVDYQK
++ LLN++ NL + + L I H +L PI + Y + E+E V EML G+I+ ++SP++SP +V KK +R +DY+K
Subjt: IRFLLNQYTNL-FDTPKALPSKRLIDHRILTLPEQKPINVRPYKYDHAQKEEIEKLVAEMLQAGIIKPNHSPFSSPMLLVKKKDGG-----WRFCVDYQK
Query: LNKITIADKFLIPVIEELLDELHGATIFSKLDLKSGYHQIRMKDEDIEKTAFRTHEGHYEFLVMPFGLMNTPATFQSLMN--------------------
LN+ITI D++ IP ++E+L +L F+ +DL G+HQI M +E I KTAF T GHYE+L MPFGL N PATFQ MN
Subjt: LNKITIADKFLIPVIEELLDELHGATIFSKLDLKSGYHQIRMKDEDIEKTAFRTHEGHYEFLVMPFGLMNTPATFQSLMN--------------------
Query: ------QHLG---IVFAILRDNQLYANRKKCVFAHSQIQYLGHNISKKGME
+HL +VF L D L KC F + +LGH ++ G++
Subjt: ------QHLG---IVFAILRDNQLYANRKKCVFAHSQIQYLGHNISKKGME
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 4.9e-37 | 39.72 | Show/hide |
Query: IDHRILTLPEQKPINVRPYKYDHAQKEEIEKLVAEMLQAGIIKPNHSPFSSPMLLVKKKDGGWRFCVDYQKLNKITIADKFLIPVIEELLDELHGATIFS
+ H I P + ++PY ++EI K+V ++L I P+ SP SSP++LV KKDG +R CVDY+ LNK TI+D F +P I+ LL + A IF+
Subjt: IDHRILTLPEQKPINVRPYKYDHAQKEEIEKLVAEMLQAGIIKPNHSPFSSPMLLVKKKDGGWRFCVDYQKLNKITIADKFLIPVIEELLDELHGATIFS
Query: KLDLKSGYHQIRMKDEDIEKTAFRTHEGHYEFLVMPFGLMNTPATFQSLMN---------------------------QHLGIVFAILRDNQLYANRKKC
LDL SGYHQI M+ +D KTAF T G YE+ VMPFGL+N P+TF M +HL V L++ L +KKC
Subjt: KLDLKSGYHQIRMKDEDIEKTAFRTHEGHYEFLVMPFGLMNTPATFQSLMN---------------------------QHLGIVFAILRDNQLYANRKKC
Query: VFAHSQIQYLGHNI
FA + ++LG++I
Subjt: VFAHSQIQYLGHNI
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 6.0e-35 | 33.99 | Show/hide |
Query: MIRFLLNQYTNLFDTPKALPSKRLIDHRILTLPEQKPINVRPYKYDHAQKEEIEKLVAEMLQAGIIKPNHSPFSSPMLLVKKK-----DGGWRFCVDYQK
++ LL ++ +F+ P + S + Q PI + Y Y + E+E+ + E+LQ GII+P++SP++SP+ +V KK + +R VD+++
Subjt: MIRFLLNQYTNLFDTPKALPSKRLIDHRILTLPEQKPINVRPYKYDHAQKEEIEKLVAEMLQAGIIKPNHSPFSSPMLLVKKK-----DGGWRFCVDYQK
Query: LNKITIADKFLIPVIEELLDELHGATIFSKLDLKSGYHQIRMKDEDIEKTAFRTHEGHYEFLVMPFGLMNTPATFQ----SLMNQHLG------------
LN +TI D + IP I L L A F+ LDL SG+HQI MK+ DI KTAF T G YEFL +PFGL N PA FQ ++ +H+G
Subjt: LNKITIADKFLIPVIEELLDELHGATIFSKLDLKSGYHQIRMKDEDIEKTAFRTHEGHYEFLVMPFGLMNTPATFQ----SLMNQHLG------------
Query: -------------IVFAILRDNQLYANRKKCVFAHSQIQYLGHNISKKGMEVD
+V A L L N +K F +Q+++LG+ ++ G++ D
Subjt: -------------IVFAILRDNQLYANRKKCVFAHSQIQYLGHNISKKGMEVD
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 4.9e-37 | 39.72 | Show/hide |
Query: IDHRILTLPEQKPINVRPYKYDHAQKEEIEKLVAEMLQAGIIKPNHSPFSSPMLLVKKKDGGWRFCVDYQKLNKITIADKFLIPVIEELLDELHGATIFS
+ H I P + ++PY ++EI K+V ++L I P+ SP SSP++LV KKDG +R CVDY+ LNK TI+D F +P I+ LL + A IF+
Subjt: IDHRILTLPEQKPINVRPYKYDHAQKEEIEKLVAEMLQAGIIKPNHSPFSSPMLLVKKKDGGWRFCVDYQKLNKITIADKFLIPVIEELLDELHGATIFS
Query: KLDLKSGYHQIRMKDEDIEKTAFRTHEGHYEFLVMPFGLMNTPATFQSLMN---------------------------QHLGIVFAILRDNQLYANRKKC
LDL SGYHQI M+ +D KTAF T G YE+ VMPFGL+N P+TF M +HL V L++ L +KKC
Subjt: KLDLKSGYHQIRMKDEDIEKTAFRTHEGHYEFLVMPFGLMNTPATFQSLMN---------------------------QHLGIVFAILRDNQLYANRKKC
Query: VFAHSQIQYLGHNI
FA + ++LG++I
Subjt: VFAHSQIQYLGHNI
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