; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc07g0189701 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc07g0189701
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationCMiso1.1chr07:8416885..8417880
RNA-Seq ExpressionCmc07g0189701
SyntenyCmc07g0189701
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR041588 - Integrase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048288.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]1.5e-15682.18Show/hide
Query:  MSGELYRKRMKADIKSYVEQCEVCQRNKYKATKPARVLQPLPIPERNLEDWTMDFIEGLSKAGGMNVIIVVVDRLRKYAYFITLKHPFSAKQVAAKFIDK
        MSGEL+ K MK DIK+YVEQCE+CQRNKY+ TKP  VLQPLPIP+R LEDWTMDFIEGL KAGGMNVI+VVVDRL KYAYF+T+KHPFSAKQVA +FIDK
Subjt:  MSGELYRKRMKADIKSYVEQCEVCQRNKYKATKPARVLQPLPIPERNLEDWTMDFIEGLSKAGGMNVIIVVVDRLRKYAYFITLKHPFSAKQVAAKFIDK

Query:  VVRRHGIPKSIISGRGKNFLSNFWKELFYTMGTILKRSRSFHPQTDGQTDRVNQCLETYLRCFCNDQPSKWDQFIPRAELWYNTTFHASTCTTPFQVVYG
        +VRRHGIPKSIIS R K FLSNFWKELFY M TILKRS +FHPQTDGQT+RVN+CLETYLRCFCN+QP+KW QFIP AELWYNTTFHAST TTPFQ VYG
Subjt:  VVRRHGIPKSIISGRGKNFLSNFWKELFYTMGTILKRSRSFHPQTDGQTDRVNQCLETYLRCFCNDQPSKWDQFIPRAELWYNTTFHASTCTTPFQVVYG

Query:  RPPPPLLSYGEYKTSNNEVELLLKERDLAINALKENLHVAQNRMKKMASMKRRELKFKVGDEVFPKLKPYPQRSLARKRAEKLASRYYGPYRITETIGEV
        RPPPPL+SYG+ KT N+EVE LLKERDLAI+ALKENL +AQNRMKK A  KRRELKFKVGDEV+ KL+ Y QRSLA+K+AEKLA +YYGPYRITETIGEV
Subjt:  RPPPPLLSYGEYKTSNNEVELLLKERDLAINALKENLHVAQNRMKKMASMKRRELKFKVGDEVFPKLKPYPQRSLARKRAEKLASRYYGPYRITETIGEV

Query:  VYRLDLSPEASIHNVFHISQLKHKLGKQHTV
        VYRLDL PEASIHNVFHISQLK KL KQHTV
Subjt:  VYRLDLSPEASIHNVFHISQLKHKLGKQHTV

KAA0064292.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]2.1e-18597.28Show/hide
Query:  MSGELYRKRMKADIKSYVEQCEVCQRNKYKATKPARVLQPLPIPERNLEDWTMDFIEGLSKAGGMNVIIVVVDRLRKYAYFITLKHPFSAKQVAAKFIDK
        MSGELYRKRMK DIKSYVEQCEVCQRNKYKATKPARVLQPLPIPER LEDWTMDFIEGLSKAGGMNVIIVVVDRL KYAYFITLKHPFSAKQV AKFIDK
Subjt:  MSGELYRKRMKADIKSYVEQCEVCQRNKYKATKPARVLQPLPIPERNLEDWTMDFIEGLSKAGGMNVIIVVVDRLRKYAYFITLKHPFSAKQVAAKFIDK

Query:  VVRRHGIPKSIISGRGKNFLSNFWKELFYTMGTILKRSRSFHPQTDGQTDRVNQCLETYLRCFCNDQPSKWDQFIPRAELWYNTTFHASTCTTPFQVVYG
        VVRRHGIPKSIISGR KNFLSNFWKELFYTMGTILKRSRSFH QTDGQT+RVNQCLETYLRCFCNDQPSKWDQFIPRAELWYNTTFHASTCTTPFQVVYG
Subjt:  VVRRHGIPKSIISGRGKNFLSNFWKELFYTMGTILKRSRSFHPQTDGQTDRVNQCLETYLRCFCNDQPSKWDQFIPRAELWYNTTFHASTCTTPFQVVYG

Query:  RPPPPLLSYGEYKTSNNEVELLLKERDLAINALKENLHVAQNRMKKMASMKRRELKFKVGDEVFPKLKPYPQRSLARKRAEKLASRYYGPYRITETIGEV
        RPPPP+LSYGE KTSNNEVELLLKERDLAINALKENLHVAQNRMKKMASMKRRELKFKVGDEVFPKLKPYPQRSLARKRAEKLASRYYGPYRITETIGEV
Subjt:  RPPPPLLSYGEYKTSNNEVELLLKERDLAINALKENLHVAQNRMKKMASMKRRELKFKVGDEVFPKLKPYPQRSLARKRAEKLASRYYGPYRITETIGEV

Query:  VYRLDLSPEASIHNVFHISQLKHKLGKQHTV
        VYRLDLSPEASIHNVFHISQLKHKLGKQHTV
Subjt:  VYRLDLSPEASIHNVFHISQLKHKLGKQHTV

TYJ96663.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]1.5e-15682.48Show/hide
Query:  MSGELYRKRMKADIKSYVEQCEVCQRNKYKATKPARVLQPLPIPERNLEDWTMDFIEGLSKAGGMNVIIVVVDRLRKYAYFITLKHPFSAKQVAAKFIDK
        MSGEL+ K MK DIK YVEQCE+CQRNK +ATKPA VLQPLPIP+R LEDWTMDFIEGL KAGGMNVI+VVVDRL KYAYF+T+KHPFSAKQVA +FIDK
Subjt:  MSGELYRKRMKADIKSYVEQCEVCQRNKYKATKPARVLQPLPIPERNLEDWTMDFIEGLSKAGGMNVIIVVVDRLRKYAYFITLKHPFSAKQVAAKFIDK

Query:  VVRRHGIPKSIISGRGKNFLSNFWKELFYTMGTILKRSRSFHPQTDGQTDRVNQCLETYLRCFCNDQPSKWDQFIPRAELWYNTTFHASTCTTPFQVVYG
        +VRRHGIPKSIIS R K F+SNFWKELFY M TILKRS +FHPQTDGQT+RVNQCLETYLRCFCN+QP+KW QFIP AELWYNTTFH+ST TTPFQ VYG
Subjt:  VVRRHGIPKSIISGRGKNFLSNFWKELFYTMGTILKRSRSFHPQTDGQTDRVNQCLETYLRCFCNDQPSKWDQFIPRAELWYNTTFHASTCTTPFQVVYG

Query:  RPPPPLLSYGEYKTSNNEVELLLKERDLAINALKENLHVAQNRMKKMASMKRRELKFKVGDEVFPKLKPYPQRSLARKRAEKLASRYYGPYRITETIGEV
        RPPPPL+SYG+ KT N+EVE LLKERDLAI+ALKENL +AQNRMKK A  KRRELKFKVGDEV+ KL+PY QRSLARKRAEKLA +YYGPYRITETIGEV
Subjt:  RPPPPLLSYGEYKTSNNEVELLLKERDLAINALKENLHVAQNRMKKMASMKRRELKFKVGDEVFPKLKPYPQRSLARKRAEKLASRYYGPYRITETIGEV

Query:  VYRLDLSPEASIHNVFHISQLKHKLGKQHTV
         YRLDL PEASIHNVFHISQLK KLG QH V
Subjt:  VYRLDLSPEASIHNVFHISQLKHKLGKQHTV

TYK21035.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]1.5e-15682.48Show/hide
Query:  MSGELYRKRMKADIKSYVEQCEVCQRNKYKATKPARVLQPLPIPERNLEDWTMDFIEGLSKAGGMNVIIVVVDRLRKYAYFITLKHPFSAKQVAAKFIDK
        MSGEL+ K MK DIK YVEQCE+CQRNK +ATKPA VLQPLPIP+R LEDWTMDFIEGL KAGGMNVI+VVVDRL KYAYF+T+KHPFSAKQVA +FIDK
Subjt:  MSGELYRKRMKADIKSYVEQCEVCQRNKYKATKPARVLQPLPIPERNLEDWTMDFIEGLSKAGGMNVIIVVVDRLRKYAYFITLKHPFSAKQVAAKFIDK

Query:  VVRRHGIPKSIISGRGKNFLSNFWKELFYTMGTILKRSRSFHPQTDGQTDRVNQCLETYLRCFCNDQPSKWDQFIPRAELWYNTTFHASTCTTPFQVVYG
        +VRRHGIPKSIIS R K F+SNFWKELFY M TILKRS +FHPQTDGQT+RVNQCLETYLRCFCN+QP+KW QFIP AELWYNTTFH+ST TTPFQ VYG
Subjt:  VVRRHGIPKSIISGRGKNFLSNFWKELFYTMGTILKRSRSFHPQTDGQTDRVNQCLETYLRCFCNDQPSKWDQFIPRAELWYNTTFHASTCTTPFQVVYG

Query:  RPPPPLLSYGEYKTSNNEVELLLKERDLAINALKENLHVAQNRMKKMASMKRRELKFKVGDEVFPKLKPYPQRSLARKRAEKLASRYYGPYRITETIGEV
        RPPPPL+SYG+ KT N+EVE LLKERDLAI+ALKENL +AQNRMKK A  KRRELKFKVGDEV+ KL+PY QRSLARKRAEKLA +YYGPYRITETIGEV
Subjt:  RPPPPLLSYGEYKTSNNEVELLLKERDLAINALKENLHVAQNRMKKMASMKRRELKFKVGDEVFPKLKPYPQRSLARKRAEKLASRYYGPYRITETIGEV

Query:  VYRLDLSPEASIHNVFHISQLKHKLGKQHTV
         YRLDL PEASIHNVFHISQLK KLG QH V
Subjt:  VYRLDLSPEASIHNVFHISQLKHKLGKQHTV

TYK28944.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]1.5e-15682.48Show/hide
Query:  MSGELYRKRMKADIKSYVEQCEVCQRNKYKATKPARVLQPLPIPERNLEDWTMDFIEGLSKAGGMNVIIVVVDRLRKYAYFITLKHPFSAKQVAAKFIDK
        MSGEL+ K MK DIK YVEQCE+CQRNK +ATKPA VLQPLPIP+R LEDWTMDFIEGL KAGGMNVI+VVVDRL KYAYF+T+KHPFSAKQVA +FIDK
Subjt:  MSGELYRKRMKADIKSYVEQCEVCQRNKYKATKPARVLQPLPIPERNLEDWTMDFIEGLSKAGGMNVIIVVVDRLRKYAYFITLKHPFSAKQVAAKFIDK

Query:  VVRRHGIPKSIISGRGKNFLSNFWKELFYTMGTILKRSRSFHPQTDGQTDRVNQCLETYLRCFCNDQPSKWDQFIPRAELWYNTTFHASTCTTPFQVVYG
        +VRRHGIPKSIIS R K F+SNFWKELFY M TILKRS +FHPQTDGQT+RVNQCLETYLRCFCN+QP+KW QFIP AELWYNTTFH+ST TTPFQ VYG
Subjt:  VVRRHGIPKSIISGRGKNFLSNFWKELFYTMGTILKRSRSFHPQTDGQTDRVNQCLETYLRCFCNDQPSKWDQFIPRAELWYNTTFHASTCTTPFQVVYG

Query:  RPPPPLLSYGEYKTSNNEVELLLKERDLAINALKENLHVAQNRMKKMASMKRRELKFKVGDEVFPKLKPYPQRSLARKRAEKLASRYYGPYRITETIGEV
        RPPPPL+SYG+ KT N+EVE LLKERDLAI+ALKENL +AQNRMKK A  KRRELKFKVGDEV+ KL+PY QRSLARKRAEKLA +YYGPYRITETIGEV
Subjt:  RPPPPLLSYGEYKTSNNEVELLLKERDLAINALKENLHVAQNRMKKMASMKRRELKFKVGDEVFPKLKPYPQRSLARKRAEKLASRYYGPYRITETIGEV

Query:  VYRLDLSPEASIHNVFHISQLKHKLGKQHTV
         YRLDL PEASIHNVFHISQLK KLG QH V
Subjt:  VYRLDLSPEASIHNVFHISQLKHKLGKQHTV

TrEMBL top hitse value%identityAlignment
A0A5D3BBH7 Ty3/gypsy retrotransposon protein7.4e-15782.48Show/hide
Query:  MSGELYRKRMKADIKSYVEQCEVCQRNKYKATKPARVLQPLPIPERNLEDWTMDFIEGLSKAGGMNVIIVVVDRLRKYAYFITLKHPFSAKQVAAKFIDK
        MSGEL+ K MK DIK YVEQCE+CQRNK +ATKPA VLQPLPIP+R LEDWTMDFIEGL KAGGMNVI+VVVDRL KYAYF+T+KHPFSAKQVA +FIDK
Subjt:  MSGELYRKRMKADIKSYVEQCEVCQRNKYKATKPARVLQPLPIPERNLEDWTMDFIEGLSKAGGMNVIIVVVDRLRKYAYFITLKHPFSAKQVAAKFIDK

Query:  VVRRHGIPKSIISGRGKNFLSNFWKELFYTMGTILKRSRSFHPQTDGQTDRVNQCLETYLRCFCNDQPSKWDQFIPRAELWYNTTFHASTCTTPFQVVYG
        +VRRHGIPKSIIS R K F+SNFWKELFY M TILKRS +FHPQTDGQT+RVNQCLETYLRCFCN+QP+KW QFIP AELWYNTTFH+ST TTPFQ VYG
Subjt:  VVRRHGIPKSIISGRGKNFLSNFWKELFYTMGTILKRSRSFHPQTDGQTDRVNQCLETYLRCFCNDQPSKWDQFIPRAELWYNTTFHASTCTTPFQVVYG

Query:  RPPPPLLSYGEYKTSNNEVELLLKERDLAINALKENLHVAQNRMKKMASMKRRELKFKVGDEVFPKLKPYPQRSLARKRAEKLASRYYGPYRITETIGEV
        RPPPPL+SYG+ KT N+EVE LLKERDLAI+ALKENL +AQNRMKK A  KRRELKFKVGDEV+ KL+PY QRSLARKRAEKLA +YYGPYRITETIGEV
Subjt:  RPPPPLLSYGEYKTSNNEVELLLKERDLAINALKENLHVAQNRMKKMASMKRRELKFKVGDEVFPKLKPYPQRSLARKRAEKLASRYYGPYRITETIGEV

Query:  VYRLDLSPEASIHNVFHISQLKHKLGKQHTV
         YRLDL PEASIHNVFHISQLK KLG QH V
Subjt:  VYRLDLSPEASIHNVFHISQLKHKLGKQHTV

A0A5D3BPN9 Transposon Ty3-G Gag-Pol polyprotein1.0e-18597.28Show/hide
Query:  MSGELYRKRMKADIKSYVEQCEVCQRNKYKATKPARVLQPLPIPERNLEDWTMDFIEGLSKAGGMNVIIVVVDRLRKYAYFITLKHPFSAKQVAAKFIDK
        MSGELYRKRMK DIKSYVEQCEVCQRNKYKATKPARVLQPLPIPER LEDWTMDFIEGLSKAGGMNVIIVVVDRL KYAYFITLKHPFSAKQV AKFIDK
Subjt:  MSGELYRKRMKADIKSYVEQCEVCQRNKYKATKPARVLQPLPIPERNLEDWTMDFIEGLSKAGGMNVIIVVVDRLRKYAYFITLKHPFSAKQVAAKFIDK

Query:  VVRRHGIPKSIISGRGKNFLSNFWKELFYTMGTILKRSRSFHPQTDGQTDRVNQCLETYLRCFCNDQPSKWDQFIPRAELWYNTTFHASTCTTPFQVVYG
        VVRRHGIPKSIISGR KNFLSNFWKELFYTMGTILKRSRSFH QTDGQT+RVNQCLETYLRCFCNDQPSKWDQFIPRAELWYNTTFHASTCTTPFQVVYG
Subjt:  VVRRHGIPKSIISGRGKNFLSNFWKELFYTMGTILKRSRSFHPQTDGQTDRVNQCLETYLRCFCNDQPSKWDQFIPRAELWYNTTFHASTCTTPFQVVYG

Query:  RPPPPLLSYGEYKTSNNEVELLLKERDLAINALKENLHVAQNRMKKMASMKRRELKFKVGDEVFPKLKPYPQRSLARKRAEKLASRYYGPYRITETIGEV
        RPPPP+LSYGE KTSNNEVELLLKERDLAINALKENLHVAQNRMKKMASMKRRELKFKVGDEVFPKLKPYPQRSLARKRAEKLASRYYGPYRITETIGEV
Subjt:  RPPPPLLSYGEYKTSNNEVELLLKERDLAINALKENLHVAQNRMKKMASMKRRELKFKVGDEVFPKLKPYPQRSLARKRAEKLASRYYGPYRITETIGEV

Query:  VYRLDLSPEASIHNVFHISQLKHKLGKQHTV
        VYRLDLSPEASIHNVFHISQLKHKLGKQHTV
Subjt:  VYRLDLSPEASIHNVFHISQLKHKLGKQHTV

A0A5D3DWA9 Ty3/gypsy retrotransposon protein7.4e-15782.48Show/hide
Query:  MSGELYRKRMKADIKSYVEQCEVCQRNKYKATKPARVLQPLPIPERNLEDWTMDFIEGLSKAGGMNVIIVVVDRLRKYAYFITLKHPFSAKQVAAKFIDK
        MSGEL+ K MK DIK YVEQCE+CQRNK +ATKPA VLQPLPIP+R LEDWTMDFIEGL KAGGMNVI+VVVDRL KYAYF+T+KHPFSAKQVA +FIDK
Subjt:  MSGELYRKRMKADIKSYVEQCEVCQRNKYKATKPARVLQPLPIPERNLEDWTMDFIEGLSKAGGMNVIIVVVDRLRKYAYFITLKHPFSAKQVAAKFIDK

Query:  VVRRHGIPKSIISGRGKNFLSNFWKELFYTMGTILKRSRSFHPQTDGQTDRVNQCLETYLRCFCNDQPSKWDQFIPRAELWYNTTFHASTCTTPFQVVYG
        +VRRHGIPKSIIS R K F+SNFWKELFY M TILKRS +FHPQTDGQT+RVNQCLETYLRCFCN+QP+KW QFIP AELWYNTTFH+ST TTPFQ VYG
Subjt:  VVRRHGIPKSIISGRGKNFLSNFWKELFYTMGTILKRSRSFHPQTDGQTDRVNQCLETYLRCFCNDQPSKWDQFIPRAELWYNTTFHASTCTTPFQVVYG

Query:  RPPPPLLSYGEYKTSNNEVELLLKERDLAINALKENLHVAQNRMKKMASMKRRELKFKVGDEVFPKLKPYPQRSLARKRAEKLASRYYGPYRITETIGEV
        RPPPPL+SYG+ KT N+EVE LLKERDLAI+ALKENL +AQNRMKK A  KRRELKFKVGDEV+ KL+PY QRSLARKRAEKLA +YYGPYRITETIGEV
Subjt:  RPPPPLLSYGEYKTSNNEVELLLKERDLAINALKENLHVAQNRMKKMASMKRRELKFKVGDEVFPKLKPYPQRSLARKRAEKLASRYYGPYRITETIGEV

Query:  VYRLDLSPEASIHNVFHISQLKHKLGKQHTV
         YRLDL PEASIHNVFHISQLK KLG QH V
Subjt:  VYRLDLSPEASIHNVFHISQLKHKLGKQHTV

A0A5D3DZK6 Ty3/gypsy retrotransposon protein7.4e-15782.48Show/hide
Query:  MSGELYRKRMKADIKSYVEQCEVCQRNKYKATKPARVLQPLPIPERNLEDWTMDFIEGLSKAGGMNVIIVVVDRLRKYAYFITLKHPFSAKQVAAKFIDK
        MSGEL+ K MK DIK YVEQCE+CQRNK +ATKPA VLQPLPIP+R LEDWTMDFIEGL KAGGMNVI+VVVDRL KYAYF+T+KHPFSAKQVA +FIDK
Subjt:  MSGELYRKRMKADIKSYVEQCEVCQRNKYKATKPARVLQPLPIPERNLEDWTMDFIEGLSKAGGMNVIIVVVDRLRKYAYFITLKHPFSAKQVAAKFIDK

Query:  VVRRHGIPKSIISGRGKNFLSNFWKELFYTMGTILKRSRSFHPQTDGQTDRVNQCLETYLRCFCNDQPSKWDQFIPRAELWYNTTFHASTCTTPFQVVYG
        +VRRHGIPKSIIS R K F+SNFWKELFY M TILKRS +FHPQTDGQT+RVNQCLETYLRCFCN+QP+KW QFIP AELWYNTTFH+ST TTPFQ VYG
Subjt:  VVRRHGIPKSIISGRGKNFLSNFWKELFYTMGTILKRSRSFHPQTDGQTDRVNQCLETYLRCFCNDQPSKWDQFIPRAELWYNTTFHASTCTTPFQVVYG

Query:  RPPPPLLSYGEYKTSNNEVELLLKERDLAINALKENLHVAQNRMKKMASMKRRELKFKVGDEVFPKLKPYPQRSLARKRAEKLASRYYGPYRITETIGEV
        RPPPPL+SYG+ KT N+EVE LLKERDLAI+ALKENL +AQNRMKK A  KRRELKFKVGDEV+ KL+PY QRSLARKRAEKLA +YYGPYRITETIGEV
Subjt:  RPPPPLLSYGEYKTSNNEVELLLKERDLAINALKENLHVAQNRMKKMASMKRRELKFKVGDEVFPKLKPYPQRSLARKRAEKLASRYYGPYRITETIGEV

Query:  VYRLDLSPEASIHNVFHISQLKHKLGKQHTV
         YRLDL PEASIHNVFHISQLK KLG QH V
Subjt:  VYRLDLSPEASIHNVFHISQLKHKLGKQHTV

A0A5D3E325 Ty3/gypsy retrotransposon protein7.4e-15782.48Show/hide
Query:  MSGELYRKRMKADIKSYVEQCEVCQRNKYKATKPARVLQPLPIPERNLEDWTMDFIEGLSKAGGMNVIIVVVDRLRKYAYFITLKHPFSAKQVAAKFIDK
        MSGEL+ K MK DIK YVEQCE+CQRNK +ATKPA VLQPLPIP+R LEDWTMDFIEGL KAGGMNVI+VVVDRL KYAYF+T+KHPFSAKQVA +FIDK
Subjt:  MSGELYRKRMKADIKSYVEQCEVCQRNKYKATKPARVLQPLPIPERNLEDWTMDFIEGLSKAGGMNVIIVVVDRLRKYAYFITLKHPFSAKQVAAKFIDK

Query:  VVRRHGIPKSIISGRGKNFLSNFWKELFYTMGTILKRSRSFHPQTDGQTDRVNQCLETYLRCFCNDQPSKWDQFIPRAELWYNTTFHASTCTTPFQVVYG
        +VRRHGIPKSIIS R K F+SNFWKELFY M TILKRS +FHPQTDGQT+RVNQCLETYLRCFCN+QP+KW QFIP AELWYNTTFH+ST TTPFQ VYG
Subjt:  VVRRHGIPKSIISGRGKNFLSNFWKELFYTMGTILKRSRSFHPQTDGQTDRVNQCLETYLRCFCNDQPSKWDQFIPRAELWYNTTFHASTCTTPFQVVYG

Query:  RPPPPLLSYGEYKTSNNEVELLLKERDLAINALKENLHVAQNRMKKMASMKRRELKFKVGDEVFPKLKPYPQRSLARKRAEKLASRYYGPYRITETIGEV
        RPPPPL+SYG+ KT N+EVE LLKERDLAI+ALKENL +AQNRMKK A  KRRELKFKVGDEV+ KL+PY QRSLARKRAEKLA +YYGPYRITETIGEV
Subjt:  RPPPPLLSYGEYKTSNNEVELLLKERDLAINALKENLHVAQNRMKKMASMKRRELKFKVGDEVFPKLKPYPQRSLARKRAEKLASRYYGPYRITETIGEV

Query:  VYRLDLSPEASIHNVFHISQLKHKLGKQHTV
         YRLDL PEASIHNVFHISQLK KLG QH V
Subjt:  VYRLDLSPEASIHNVFHISQLKHKLGKQHTV

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein8.2e-4434.17Show/hide
Query:  KRMKADIKSYVEQCEVCQRNKYKATKPARVLQPLPIPERNLEDWTMDFIEGLSKAGGMNVIIVVVDRLRKYAYFITLKHPFSAKQVAAKFIDKVVRRHGI
        K ++  I+ YV+ C  CQ NK +  KP   LQP+P  ER  E  +MDFI  L ++ G N + VVVDR  K A  +      +A+Q A  F  +V+   G 
Subjt:  KRMKADIKSYVEQCEVCQRNKYKATKPARVLQPLPIPERNLEDWTMDFIEGLSKAGGMNVIIVVVDRLRKYAYFITLKHPFSAKQVAAKFIDKVVRRHGI

Query:  PKSIISGRGKNFLSNFWKELFYTMGTILKRSRSFHPQTDGQTDRVNQCLETYLRCFCNDQPSKWDQFIPRAELWYNTTFHASTCTTPFQVVYGRPPPPLL
        PK II+     F S  WK+  +    ++K S  + PQTDGQT+R NQ +E  LRC C+  P+ W   I   +  YN   H++T  TPF++V+     P L
Subjt:  PKSIISGRGKNFLSNFWKELFYTMGTILKRSRSFHPQTDGQTDRVNQCLETYLRCFCNDQPSKWDQFIPRAELWYNTTFHASTCTTPFQVVYGRPPPPLL

Query:  SYGEYKTSNNEVELLLKERDLAINALKENLHVAQNRMKKMASMKRREL-KFKVGDEVFPKLKPYPQRSLARKRAEKLASRYYGPYRITETIGEVVYRLDL
        S  E  + +++ +   +E       +KE+L+    +MKK   MK +E+ +F+ GD V  K      ++    ++ KLA  + GP+ + +  G   Y LDL
Subjt:  SYGEYKTSNNEVELLLKERDLAINALKENLHVAQNRMKKMASMKRREL-KFKVGDEVFPKLKPYPQRSLARKRAEKLASRYYGPYRITETIGEVVYRLDL

Query:  SPEASIH---NVFHISQLK
         P++  H   + FH+S L+
Subjt:  SPEASIH---NVFHISQLK

P0CT35 Transposon Tf2-2 polyprotein8.2e-4434.17Show/hide
Query:  KRMKADIKSYVEQCEVCQRNKYKATKPARVLQPLPIPERNLEDWTMDFIEGLSKAGGMNVIIVVVDRLRKYAYFITLKHPFSAKQVAAKFIDKVVRRHGI
        K ++  I+ YV+ C  CQ NK +  KP   LQP+P  ER  E  +MDFI  L ++ G N + VVVDR  K A  +      +A+Q A  F  +V+   G 
Subjt:  KRMKADIKSYVEQCEVCQRNKYKATKPARVLQPLPIPERNLEDWTMDFIEGLSKAGGMNVIIVVVDRLRKYAYFITLKHPFSAKQVAAKFIDKVVRRHGI

Query:  PKSIISGRGKNFLSNFWKELFYTMGTILKRSRSFHPQTDGQTDRVNQCLETYLRCFCNDQPSKWDQFIPRAELWYNTTFHASTCTTPFQVVYGRPPPPLL
        PK II+     F S  WK+  +    ++K S  + PQTDGQT+R NQ +E  LRC C+  P+ W   I   +  YN   H++T  TPF++V+     P L
Subjt:  PKSIISGRGKNFLSNFWKELFYTMGTILKRSRSFHPQTDGQTDRVNQCLETYLRCFCNDQPSKWDQFIPRAELWYNTTFHASTCTTPFQVVYGRPPPPLL

Query:  SYGEYKTSNNEVELLLKERDLAINALKENLHVAQNRMKKMASMKRREL-KFKVGDEVFPKLKPYPQRSLARKRAEKLASRYYGPYRITETIGEVVYRLDL
        S  E  + +++ +   +E       +KE+L+    +MKK   MK +E+ +F+ GD V  K      ++    ++ KLA  + GP+ + +  G   Y LDL
Subjt:  SYGEYKTSNNEVELLLKERDLAINALKENLHVAQNRMKKMASMKRREL-KFKVGDEVFPKLKPYPQRSLARKRAEKLASRYYGPYRITETIGEVVYRLDL

Query:  SPEASIH---NVFHISQLK
         P++  H   + FH+S L+
Subjt:  SPEASIH---NVFHISQLK

P0CT36 Transposon Tf2-3 polyprotein8.2e-4434.17Show/hide
Query:  KRMKADIKSYVEQCEVCQRNKYKATKPARVLQPLPIPERNLEDWTMDFIEGLSKAGGMNVIIVVVDRLRKYAYFITLKHPFSAKQVAAKFIDKVVRRHGI
        K ++  I+ YV+ C  CQ NK +  KP   LQP+P  ER  E  +MDFI  L ++ G N + VVVDR  K A  +      +A+Q A  F  +V+   G 
Subjt:  KRMKADIKSYVEQCEVCQRNKYKATKPARVLQPLPIPERNLEDWTMDFIEGLSKAGGMNVIIVVVDRLRKYAYFITLKHPFSAKQVAAKFIDKVVRRHGI

Query:  PKSIISGRGKNFLSNFWKELFYTMGTILKRSRSFHPQTDGQTDRVNQCLETYLRCFCNDQPSKWDQFIPRAELWYNTTFHASTCTTPFQVVYGRPPPPLL
        PK II+     F S  WK+  +    ++K S  + PQTDGQT+R NQ +E  LRC C+  P+ W   I   +  YN   H++T  TPF++V+     P L
Subjt:  PKSIISGRGKNFLSNFWKELFYTMGTILKRSRSFHPQTDGQTDRVNQCLETYLRCFCNDQPSKWDQFIPRAELWYNTTFHASTCTTPFQVVYGRPPPPLL

Query:  SYGEYKTSNNEVELLLKERDLAINALKENLHVAQNRMKKMASMKRREL-KFKVGDEVFPKLKPYPQRSLARKRAEKLASRYYGPYRITETIGEVVYRLDL
        S  E  + +++ +   +E       +KE+L+    +MKK   MK +E+ +F+ GD V  K      ++    ++ KLA  + GP+ + +  G   Y LDL
Subjt:  SYGEYKTSNNEVELLLKERDLAINALKENLHVAQNRMKKMASMKRREL-KFKVGDEVFPKLKPYPQRSLARKRAEKLASRYYGPYRITETIGEVVYRLDL

Query:  SPEASIH---NVFHISQLK
         P++  H   + FH+S L+
Subjt:  SPEASIH---NVFHISQLK

P0CT41 Transposon Tf2-12 polyprotein8.2e-4434.17Show/hide
Query:  KRMKADIKSYVEQCEVCQRNKYKATKPARVLQPLPIPERNLEDWTMDFIEGLSKAGGMNVIIVVVDRLRKYAYFITLKHPFSAKQVAAKFIDKVVRRHGI
        K ++  I+ YV+ C  CQ NK +  KP   LQP+P  ER  E  +MDFI  L ++ G N + VVVDR  K A  +      +A+Q A  F  +V+   G 
Subjt:  KRMKADIKSYVEQCEVCQRNKYKATKPARVLQPLPIPERNLEDWTMDFIEGLSKAGGMNVIIVVVDRLRKYAYFITLKHPFSAKQVAAKFIDKVVRRHGI

Query:  PKSIISGRGKNFLSNFWKELFYTMGTILKRSRSFHPQTDGQTDRVNQCLETYLRCFCNDQPSKWDQFIPRAELWYNTTFHASTCTTPFQVVYGRPPPPLL
        PK II+     F S  WK+  +    ++K S  + PQTDGQT+R NQ +E  LRC C+  P+ W   I   +  YN   H++T  TPF++V+     P L
Subjt:  PKSIISGRGKNFLSNFWKELFYTMGTILKRSRSFHPQTDGQTDRVNQCLETYLRCFCNDQPSKWDQFIPRAELWYNTTFHASTCTTPFQVVYGRPPPPLL

Query:  SYGEYKTSNNEVELLLKERDLAINALKENLHVAQNRMKKMASMKRREL-KFKVGDEVFPKLKPYPQRSLARKRAEKLASRYYGPYRITETIGEVVYRLDL
        S  E  + +++ +   +E       +KE+L+    +MKK   MK +E+ +F+ GD V  K      ++    ++ KLA  + GP+ + +  G   Y LDL
Subjt:  SYGEYKTSNNEVELLLKERDLAINALKENLHVAQNRMKKMASMKRREL-KFKVGDEVFPKLKPYPQRSLARKRAEKLASRYYGPYRITETIGEVVYRLDL

Query:  SPEASIH---NVFHISQLK
         P++  H   + FH+S L+
Subjt:  SPEASIH---NVFHISQLK

Q9UR07 Transposon Tf2-11 polyprotein8.2e-4434.17Show/hide
Query:  KRMKADIKSYVEQCEVCQRNKYKATKPARVLQPLPIPERNLEDWTMDFIEGLSKAGGMNVIIVVVDRLRKYAYFITLKHPFSAKQVAAKFIDKVVRRHGI
        K ++  I+ YV+ C  CQ NK +  KP   LQP+P  ER  E  +MDFI  L ++ G N + VVVDR  K A  +      +A+Q A  F  +V+   G 
Subjt:  KRMKADIKSYVEQCEVCQRNKYKATKPARVLQPLPIPERNLEDWTMDFIEGLSKAGGMNVIIVVVDRLRKYAYFITLKHPFSAKQVAAKFIDKVVRRHGI

Query:  PKSIISGRGKNFLSNFWKELFYTMGTILKRSRSFHPQTDGQTDRVNQCLETYLRCFCNDQPSKWDQFIPRAELWYNTTFHASTCTTPFQVVYGRPPPPLL
        PK II+     F S  WK+  +    ++K S  + PQTDGQT+R NQ +E  LRC C+  P+ W   I   +  YN   H++T  TPF++V+     P L
Subjt:  PKSIISGRGKNFLSNFWKELFYTMGTILKRSRSFHPQTDGQTDRVNQCLETYLRCFCNDQPSKWDQFIPRAELWYNTTFHASTCTTPFQVVYGRPPPPLL

Query:  SYGEYKTSNNEVELLLKERDLAINALKENLHVAQNRMKKMASMKRREL-KFKVGDEVFPKLKPYPQRSLARKRAEKLASRYYGPYRITETIGEVVYRLDL
        S  E  + +++ +   +E       +KE+L+    +MKK   MK +E+ +F+ GD V  K      ++    ++ KLA  + GP+ + +  G   Y LDL
Subjt:  SYGEYKTSNNEVELLLKERDLAINALKENLHVAQNRMKKMASMKRREL-KFKVGDEVFPKLKPYPQRSLARKRAEKLASRYYGPYRITETIGEVVYRLDL

Query:  SPEASIH---NVFHISQLK
         P++  H   + FH+S L+
Subjt:  SPEASIH---NVFHISQLK

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGGTGAGCTCTATAGGAAGAGAATGAAGGCAGACATTAAAAGCTATGTAGAGCAATGCGAGGTATGTCAAAGAAATAAGTACAAAGCTACCAAGCCAGCA
AGGGTTCTTCAACCTCTCCCCATACCAGAAAGAAATTTGGAAGACTGGACTATGGACTTTATAGAAGGACTTTCTAAAGCAGGGGGCATGAATGTAATTATTGTT
GTGGTGGATCGATTAAGAAAATATGCTTATTTCATCACTTTGAAACACCCATTCTCAGCAAAGCAAGTAGCAGCGAAATTCATTGATAAGGTAGTAAGAAGGCAT
GGAATTCCTAAGTCTATCATCTCGGGTAGAGGCAAAAATTTTCTTAGCAACTTTTGGAAGGAGTTATTCTACACTATGGGAACCATACTCAAAAGGAGCAGGTCC
TTTCACCCACAAACAGATGGACAAACAGATAGAGTAAACCAGTGTTTAGAGACATATTTAAGGTGTTTCTGTAATGATCAGCCTAGTAAATGGGATCAGTTCATA
CCCCGGGCGGAGCTGTGGTATAATACAACTTTCCATGCCTCTACGTGCACAACCCCTTTCCAGGTCGTATATGGTCGGCCACCACCACCCCTGCTATCATACGGA
GAATATAAGACATCAAACAATGAGGTTGAATTGTTGCTGAAGGAAAGGGACTTGGCAATTAATGCACTGAAGGAAAATCTACATGTCGCTCAAAACCGAATGAAG
AAAATGGCAAGTATGAAAAGAAGGGAACTCAAATTTAAAGTCGGAGATGAAGTGTTTCCGAAACTAAAACCATACCCCCAACGTTCATTAGCAAGGAAAAGAGCA
GAAAAGCTAGCTTCTAGATATTATGGCCCTTATCGGATCACTGAAACAATTGGAGAAGTAGTATATAGACTCGATCTTTCTCCAGAAGCATCAATTCACAATGTC
TTTCATATTTCCCAACTGAAACATAAATTGGGAAAACAACACACAGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGGTGAGCTCTATAGGAAGAGAATGAAGGCAGACATTAAAAGCTATGTAGAGCAATGCGAGGTATGTCAAAGAAATAAGTACAAAGCTACCAAGCCAGCA
AGGGTTCTTCAACCTCTCCCCATACCAGAAAGAAATTTGGAAGACTGGACTATGGACTTTATAGAAGGACTTTCTAAAGCAGGGGGCATGAATGTAATTATTGTT
GTGGTGGATCGATTAAGAAAATATGCTTATTTCATCACTTTGAAACACCCATTCTCAGCAAAGCAAGTAGCAGCGAAATTCATTGATAAGGTAGTAAGAAGGCAT
GGAATTCCTAAGTCTATCATCTCGGGTAGAGGCAAAAATTTTCTTAGCAACTTTTGGAAGGAGTTATTCTACACTATGGGAACCATACTCAAAAGGAGCAGGTCC
TTTCACCCACAAACAGATGGACAAACAGATAGAGTAAACCAGTGTTTAGAGACATATTTAAGGTGTTTCTGTAATGATCAGCCTAGTAAATGGGATCAGTTCATA
CCCCGGGCGGAGCTGTGGTATAATACAACTTTCCATGCCTCTACGTGCACAACCCCTTTCCAGGTCGTATATGGTCGGCCACCACCACCCCTGCTATCATACGGA
GAATATAAGACATCAAACAATGAGGTTGAATTGTTGCTGAAGGAAAGGGACTTGGCAATTAATGCACTGAAGGAAAATCTACATGTCGCTCAAAACCGAATGAAG
AAAATGGCAAGTATGAAAAGAAGGGAACTCAAATTTAAAGTCGGAGATGAAGTGTTTCCGAAACTAAAACCATACCCCCAACGTTCATTAGCAAGGAAAAGAGCA
GAAAAGCTAGCTTCTAGATATTATGGCCCTTATCGGATCACTGAAACAATTGGAGAAGTAGTATATAGACTCGATCTTTCTCCAGAAGCATCAATTCACAATGTC
TTTCATATTTCCCAACTGAAACATAAATTGGGAAAACAACACACAGTATAA
Protein sequenceShow/hide protein sequence
MSGELYRKRMKADIKSYVEQCEVCQRNKYKATKPARVLQPLPIPERNLEDWTMDFIEGLSKAGGMNVIIVVVDRLRKYAYFITLKHPFSAKQVAAKFIDKVVRRH
GIPKSIISGRGKNFLSNFWKELFYTMGTILKRSRSFHPQTDGQTDRVNQCLETYLRCFCNDQPSKWDQFIPRAELWYNTTFHASTCTTPFQVVYGRPPPPLLSYG
EYKTSNNEVELLLKERDLAINALKENLHVAQNRMKKMASMKRRELKFKVGDEVFPKLKPYPQRSLARKRAEKLASRYYGPYRITETIGEVVYRLDLSPEASIHNV
FHISQLKHKLGKQHTV