; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc07g0189801 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc07g0189801
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr07:8551107..8551802
RNA-Seq ExpressionCmc07g0189801
SyntenyCmc07g0189801
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR041588 - Integrase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050493.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]9.2e-12491.74Show/hide
Query:  MHPGCTKMYRTLKKTYWWLGMKKEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPEWKWKHITIDFLFGLPRTSSEHDCIWVIVDRLTKTTRFIPVKATS
        MHPG TKMYRTLKKTYWW GMK+EIAEYVDRCLICQQVKPVRQR GGFLNPLPVPEWKW+HIT+DFLFGLPRTSS HD IWVIVDRLTKTTRFIP+K TS
Subjt:  MHPGCTKMYRTLKKTYWWLGMKKEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPEWKWKHITIDFLFGLPRTSSEHDCIWVIVDRLTKTTRFIPVKATS

Query:  TLDHIARLYVDKIVSQYGVPVSIVSNRDPRFTSKFWPSLQKAMGIGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKESWDTHLPLMEFAYNNGYQF
        TLD +ARLYVDKIVSQYGVPVSIVS+RDPRFTSKFWPSLQKAMG GLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLK SWDTHLPLMEFAYNN YQ 
Subjt:  TLDHIARLYVDKIVSQYGVPVSIVSNRDPRFTSKFWPSLQKAMGIGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKESWDTHLPLMEFAYNNGYQF

Query:  SIGKAPYEALYGRPCRTPVCWNEVGEWKLV
        SIG APYEALYGRPCRTPVCWNEVGE KLV
Subjt:  SIGKAPYEALYGRPCRTPVCWNEVGEWKLV

KAA0053246.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]9.2e-12491.74Show/hide
Query:  MHPGCTKMYRTLKKTYWWLGMKKEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPEWKWKHITIDFLFGLPRTSSEHDCIWVIVDRLTKTTRFIPVKATS
        MHPG TKMYRTLKKTYWW GMK+EIAEYVDRCLICQQVKPVRQR GGFLNPLPVPEWKW+HIT+DFLFGLPRTSS HD IWVIVDRLTKTTRFIP+K TS
Subjt:  MHPGCTKMYRTLKKTYWWLGMKKEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPEWKWKHITIDFLFGLPRTSSEHDCIWVIVDRLTKTTRFIPVKATS

Query:  TLDHIARLYVDKIVSQYGVPVSIVSNRDPRFTSKFWPSLQKAMGIGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKESWDTHLPLMEFAYNNGYQF
        TLD +ARLYVDKIVSQYGVPVSIVS+RDPRFTSKFWPSLQKAMG GLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLK SWDTHLPLMEFAYNN YQ 
Subjt:  TLDHIARLYVDKIVSQYGVPVSIVSNRDPRFTSKFWPSLQKAMGIGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKESWDTHLPLMEFAYNNGYQF

Query:  SIGKAPYEALYGRPCRTPVCWNEVGEWKLV
        SIG APYEALYGRPCRTPVCWNEVGE KLV
Subjt:  SIGKAPYEALYGRPCRTPVCWNEVGEWKLV

KAA0059912.1 reverse transcriptase [Cucumis melo var. makuwa]9.2e-12491.74Show/hide
Query:  MHPGCTKMYRTLKKTYWWLGMKKEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPEWKWKHITIDFLFGLPRTSSEHDCIWVIVDRLTKTTRFIPVKATS
        MHPG TKMYRTLKKTYWW GMK+EIAEYVDRCLICQQVKPVRQR GGFLNPLPVPEWKW+HIT+DFLFGLPRTSS HD IWVIVDRLTKTTRFIP+K TS
Subjt:  MHPGCTKMYRTLKKTYWWLGMKKEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPEWKWKHITIDFLFGLPRTSSEHDCIWVIVDRLTKTTRFIPVKATS

Query:  TLDHIARLYVDKIVSQYGVPVSIVSNRDPRFTSKFWPSLQKAMGIGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKESWDTHLPLMEFAYNNGYQF
        TLD +ARLYVDKIVSQYGVPVSIVS+RDPRFTSKFWPSLQKAMG GLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLK SWDTHLPLMEFAYNN YQ 
Subjt:  TLDHIARLYVDKIVSQYGVPVSIVSNRDPRFTSKFWPSLQKAMGIGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKESWDTHLPLMEFAYNNGYQF

Query:  SIGKAPYEALYGRPCRTPVCWNEVGEWKLV
        SIG APYEALYGRPCRTPVCWNEVGE KLV
Subjt:  SIGKAPYEALYGRPCRTPVCWNEVGEWKLV

KAA0064280.1 Gag protease polyprotein [Cucumis melo var. makuwa]8.5e-13899.57Show/hide
Query:  MHPGCTKMYRTLKKTYWWLGMKKEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPEWKWKHITIDFLFGLPRTSSEHDCIWVIVDRLTKTTRFIPVKATS
        MHPGCTKMYRTLKKTYWW GMKKEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPEWKWKHITIDFLFGLPRTSSEHDCIWVIVDRLTKTTRFIPVKATS
Subjt:  MHPGCTKMYRTLKKTYWWLGMKKEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPEWKWKHITIDFLFGLPRTSSEHDCIWVIVDRLTKTTRFIPVKATS

Query:  TLDHIARLYVDKIVSQYGVPVSIVSNRDPRFTSKFWPSLQKAMGIGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKESWDTHLPLMEFAYNNGYQF
        TLDHIARLYVDKIVSQYGVPVSIVSNRDPRFTSKFWPSLQKAMGIGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKESWDTHLPLMEFAYNNGYQF
Subjt:  TLDHIARLYVDKIVSQYGVPVSIVSNRDPRFTSKFWPSLQKAMGIGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKESWDTHLPLMEFAYNNGYQF

Query:  SIGKAPYEALYGRPCRTPVCWNEVGEWKLVS
        SIGKAPYEALYGRPCRTPVCWNEVGEWKLVS
Subjt:  SIGKAPYEALYGRPCRTPVCWNEVGEWKLVS

TYK01016.1 Gag protease polyprotein [Cucumis melo var. makuwa]2.9e-138100Show/hide
Query:  MHPGCTKMYRTLKKTYWWLGMKKEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPEWKWKHITIDFLFGLPRTSSEHDCIWVIVDRLTKTTRFIPVKATS
        MHPGCTKMYRTLKKTYWWLGMKKEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPEWKWKHITIDFLFGLPRTSSEHDCIWVIVDRLTKTTRFIPVKATS
Subjt:  MHPGCTKMYRTLKKTYWWLGMKKEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPEWKWKHITIDFLFGLPRTSSEHDCIWVIVDRLTKTTRFIPVKATS

Query:  TLDHIARLYVDKIVSQYGVPVSIVSNRDPRFTSKFWPSLQKAMGIGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKESWDTHLPLMEFAYNNGYQF
        TLDHIARLYVDKIVSQYGVPVSIVSNRDPRFTSKFWPSLQKAMGIGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKESWDTHLPLMEFAYNNGYQF
Subjt:  TLDHIARLYVDKIVSQYGVPVSIVSNRDPRFTSKFWPSLQKAMGIGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKESWDTHLPLMEFAYNNGYQF

Query:  SIGKAPYEALYGRPCRTPVCWNEVGEWKLVS
        SIGKAPYEALYGRPCRTPVCWNEVGEWKLVS
Subjt:  SIGKAPYEALYGRPCRTPVCWNEVGEWKLVS

TrEMBL top hitse value%identityAlignment
A0A5A7U2V7 Reverse transcriptase4.4e-12491.74Show/hide
Query:  MHPGCTKMYRTLKKTYWWLGMKKEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPEWKWKHITIDFLFGLPRTSSEHDCIWVIVDRLTKTTRFIPVKATS
        MHPG TKMYRTLKKTYWW GMK+EIAEYVDRCLICQQVKPVRQR GGFLNPLPVPEWKW+HIT+DFLFGLPRTSS HD IWVIVDRLTKTTRFIP+K TS
Subjt:  MHPGCTKMYRTLKKTYWWLGMKKEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPEWKWKHITIDFLFGLPRTSSEHDCIWVIVDRLTKTTRFIPVKATS

Query:  TLDHIARLYVDKIVSQYGVPVSIVSNRDPRFTSKFWPSLQKAMGIGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKESWDTHLPLMEFAYNNGYQF
        TLD +ARLYVDKIVSQYGVPVSIVS+RDPRFTSKFWPSLQKAMG GLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLK SWDTHLPLMEFAYNN YQ 
Subjt:  TLDHIARLYVDKIVSQYGVPVSIVSNRDPRFTSKFWPSLQKAMGIGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKESWDTHLPLMEFAYNNGYQF

Query:  SIGKAPYEALYGRPCRTPVCWNEVGEWKLV
        SIG APYEALYGRPCRTPVCWNEVGE KLV
Subjt:  SIGKAPYEALYGRPCRTPVCWNEVGEWKLV

A0A5A7VAM6 Gag protease polyprotein4.1e-13899.57Show/hide
Query:  MHPGCTKMYRTLKKTYWWLGMKKEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPEWKWKHITIDFLFGLPRTSSEHDCIWVIVDRLTKTTRFIPVKATS
        MHPGCTKMYRTLKKTYWW GMKKEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPEWKWKHITIDFLFGLPRTSSEHDCIWVIVDRLTKTTRFIPVKATS
Subjt:  MHPGCTKMYRTLKKTYWWLGMKKEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPEWKWKHITIDFLFGLPRTSSEHDCIWVIVDRLTKTTRFIPVKATS

Query:  TLDHIARLYVDKIVSQYGVPVSIVSNRDPRFTSKFWPSLQKAMGIGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKESWDTHLPLMEFAYNNGYQF
        TLDHIARLYVDKIVSQYGVPVSIVSNRDPRFTSKFWPSLQKAMGIGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKESWDTHLPLMEFAYNNGYQF
Subjt:  TLDHIARLYVDKIVSQYGVPVSIVSNRDPRFTSKFWPSLQKAMGIGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKESWDTHLPLMEFAYNNGYQF

Query:  SIGKAPYEALYGRPCRTPVCWNEVGEWKLVS
        SIGKAPYEALYGRPCRTPVCWNEVGEWKLVS
Subjt:  SIGKAPYEALYGRPCRTPVCWNEVGEWKLVS

A0A5D3BHI1 Reverse transcriptase4.4e-12491.74Show/hide
Query:  MHPGCTKMYRTLKKTYWWLGMKKEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPEWKWKHITIDFLFGLPRTSSEHDCIWVIVDRLTKTTRFIPVKATS
        MHPG TKMYRTLKKTYWW GMK+EIAEYVDRCLICQQVKPVRQR GGFLNPLPVPEWKW+HIT+DFLFGLPRTSS HD IWVIVDRLTKTTRFIP+K TS
Subjt:  MHPGCTKMYRTLKKTYWWLGMKKEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPEWKWKHITIDFLFGLPRTSSEHDCIWVIVDRLTKTTRFIPVKATS

Query:  TLDHIARLYVDKIVSQYGVPVSIVSNRDPRFTSKFWPSLQKAMGIGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKESWDTHLPLMEFAYNNGYQF
        TLD +ARLYVDKIVSQYGVPVSIVS+RDPRFTSKFWPSLQKAMG GLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLK SWDTHLPLMEFAYNN YQ 
Subjt:  TLDHIARLYVDKIVSQYGVPVSIVSNRDPRFTSKFWPSLQKAMGIGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKESWDTHLPLMEFAYNNGYQF

Query:  SIGKAPYEALYGRPCRTPVCWNEVGEWKLV
        SIG APYEALYGRPCRTPVCWNEVGE KLV
Subjt:  SIGKAPYEALYGRPCRTPVCWNEVGEWKLV

A0A5D3BRZ5 Gag protease polyprotein1.4e-138100Show/hide
Query:  MHPGCTKMYRTLKKTYWWLGMKKEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPEWKWKHITIDFLFGLPRTSSEHDCIWVIVDRLTKTTRFIPVKATS
        MHPGCTKMYRTLKKTYWWLGMKKEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPEWKWKHITIDFLFGLPRTSSEHDCIWVIVDRLTKTTRFIPVKATS
Subjt:  MHPGCTKMYRTLKKTYWWLGMKKEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPEWKWKHITIDFLFGLPRTSSEHDCIWVIVDRLTKTTRFIPVKATS

Query:  TLDHIARLYVDKIVSQYGVPVSIVSNRDPRFTSKFWPSLQKAMGIGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKESWDTHLPLMEFAYNNGYQF
        TLDHIARLYVDKIVSQYGVPVSIVSNRDPRFTSKFWPSLQKAMGIGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKESWDTHLPLMEFAYNNGYQF
Subjt:  TLDHIARLYVDKIVSQYGVPVSIVSNRDPRFTSKFWPSLQKAMGIGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKESWDTHLPLMEFAYNNGYQF

Query:  SIGKAPYEALYGRPCRTPVCWNEVGEWKLVS
        SIGKAPYEALYGRPCRTPVCWNEVGEWKLVS
Subjt:  SIGKAPYEALYGRPCRTPVCWNEVGEWKLVS

A0A5D3BS67 Reverse transcriptase4.4e-12491.74Show/hide
Query:  MHPGCTKMYRTLKKTYWWLGMKKEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPEWKWKHITIDFLFGLPRTSSEHDCIWVIVDRLTKTTRFIPVKATS
        MHPG TKMYRTLKKTYWW GMK+EIAEYVDRCLICQQVKPVRQR GGFLNPLPVPEWKW+HIT+DFLFGLPRTSS HD IWVIVDRLTKTTRFIP+K TS
Subjt:  MHPGCTKMYRTLKKTYWWLGMKKEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPEWKWKHITIDFLFGLPRTSSEHDCIWVIVDRLTKTTRFIPVKATS

Query:  TLDHIARLYVDKIVSQYGVPVSIVSNRDPRFTSKFWPSLQKAMGIGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKESWDTHLPLMEFAYNNGYQF
        TLD +ARLYVDKIVSQYGVPVSIVS+RDPRFTSKFWPSLQKAMG GLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLK SWDTHLPLMEFAYNN YQ 
Subjt:  TLDHIARLYVDKIVSQYGVPVSIVSNRDPRFTSKFWPSLQKAMGIGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKESWDTHLPLMEFAYNNGYQF

Query:  SIGKAPYEALYGRPCRTPVCWNEVGEWKLV
        SIG APYEALYGRPCRTPVCWNEVGE KLV
Subjt:  SIGKAPYEALYGRPCRTPVCWNEVGEWKLV

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein1.1e-3432.23Show/hide
Query:  MHPGCTKMYRTLKKTYWWLGMKKEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPEWKWKHITIDFLFGLPRTSSEHDCIWVIVDRLTKTTRFIPVKATS
        +HPG   +   + + + W G++K+I EYV  C  CQ  K    +  G L P+P  E  W+ +++DF+  LP  SS ++ ++V+VDR +K    +P   + 
Subjt:  MHPGCTKMYRTLKKTYWWLGMKKEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPEWKWKHITIDFLFGLPRTSSEHDCIWVIVDRLTKTTRFIPVKATS

Query:  TLDHIARLYVDKIVSQYGVPVSIVSNRDPRFTSKFWPSLQKAMGIGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKESWDTHLPLMEFAYNNGYQF
        T +  AR++  ++++ +G P  I+++ D  FTS+ W          +KFS  + PQTDGQ+ERT QT+E +LR        +W  H+ L++ +YNN    
Subjt:  TLDHIARLYVDKIVSQYGVPVSIVSNRDPRFTSKFWPSLQKAMGIGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKESWDTHLPLMEFAYNNGYQF

Query:  SIGKAPYEALY
        +    P+E ++
Subjt:  SIGKAPYEALY

P0CT41 Transposon Tf2-12 polyprotein1.1e-3432.23Show/hide
Query:  MHPGCTKMYRTLKKTYWWLGMKKEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPEWKWKHITIDFLFGLPRTSSEHDCIWVIVDRLTKTTRFIPVKATS
        +HPG   +   + + + W G++K+I EYV  C  CQ  K    +  G L P+P  E  W+ +++DF+  LP  SS ++ ++V+VDR +K    +P   + 
Subjt:  MHPGCTKMYRTLKKTYWWLGMKKEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPEWKWKHITIDFLFGLPRTSSEHDCIWVIVDRLTKTTRFIPVKATS

Query:  TLDHIARLYVDKIVSQYGVPVSIVSNRDPRFTSKFWPSLQKAMGIGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKESWDTHLPLMEFAYNNGYQF
        T +  AR++  ++++ +G P  I+++ D  FTS+ W          +KFS  + PQTDGQ+ERT QT+E +LR        +W  H+ L++ +YNN    
Subjt:  TLDHIARLYVDKIVSQYGVPVSIVSNRDPRFTSKFWPSLQKAMGIGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKESWDTHLPLMEFAYNNGYQF

Query:  SIGKAPYEALY
        +    P+E ++
Subjt:  SIGKAPYEALY

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein4.5e-4140.09Show/hide
Query:  HPGCTKMYRTLKKTYWWLGMKKEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPEWKWKHITIDFLFGLPRTSSEHDCIWVIVDRLTKTTRFIPVKATST
        H G T     +   Y+W  ++  I +Y+  C+ CQ +K  R RL G L PLP+ E +W  I++DF+ GLP TS+  + I V+VDR +K   FI  + T  
Subjt:  HPGCTKMYRTLKKTYWWLGMKKEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPEWKWKHITIDFLFGLPRTSSEHDCIWVIVDRLTKTTRFIPVKATST

Query:  LDHIARLYVDKIVSQYGVPVSIVSNRDPRFTSKFWPSLQKAMGIGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKESWDTHLPLMEFAYNNGYQFS
           +  L    I S +G P +I S+RD R T+  +  L K +GI    S++ HPQTDGQSERTIQTL  +LRA V    ++W  +LP +EF YN+    +
Subjt:  LDHIARLYVDKIVSQYGVPVSIVSNRDPRFTSKFWPSLQKAMGIGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKESWDTHLPLMEFAYNNGYQFS

Query:  IGKAPYEALYGRPCRTP
        +GK+P+E   G    TP
Subjt:  IGKAPYEALYGRPCRTP

Q99315 Transposon Ty3-G Gag-Pol polyprotein1.3e-4039.63Show/hide
Query:  HPGCTKMYRTLKKTYWWLGMKKEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPEWKWKHITIDFLFGLPRTSSEHDCIWVIVDRLTKTTRFIPVKATST
        H G T     +   Y+W  ++  I +Y+  C+ CQ +K  R RL G L PLP+ E +W  I++DF+ GLP TS+  + I V+VDR +K   FI  + T  
Subjt:  HPGCTKMYRTLKKTYWWLGMKKEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPEWKWKHITIDFLFGLPRTSSEHDCIWVIVDRLTKTTRFIPVKATST

Query:  LDHIARLYVDKIVSQYGVPVSIVSNRDPRFTSKFWPSLQKAMGIGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKESWDTHLPLMEFAYNNGYQFS
           +  L    I S +G P +I S+RD R T+  +  L K +GI    S++ HPQTDGQSERTIQTL  +LRA      ++W  +LP +EF YN+    +
Subjt:  LDHIARLYVDKIVSQYGVPVSIVSNRDPRFTSKFWPSLQKAMGIGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKESWDTHLPLMEFAYNNGYQFS

Query:  IGKAPYEALYGRPCRTP
        +GK+P+E   G    TP
Subjt:  IGKAPYEALYGRPCRTP

Q9UR07 Transposon Tf2-11 polyprotein1.1e-3432.23Show/hide
Query:  MHPGCTKMYRTLKKTYWWLGMKKEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPEWKWKHITIDFLFGLPRTSSEHDCIWVIVDRLTKTTRFIPVKATS
        +HPG   +   + + + W G++K+I EYV  C  CQ  K    +  G L P+P  E  W+ +++DF+  LP  SS ++ ++V+VDR +K    +P   + 
Subjt:  MHPGCTKMYRTLKKTYWWLGMKKEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPEWKWKHITIDFLFGLPRTSSEHDCIWVIVDRLTKTTRFIPVKATS

Query:  TLDHIARLYVDKIVSQYGVPVSIVSNRDPRFTSKFWPSLQKAMGIGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKESWDTHLPLMEFAYNNGYQF
        T +  AR++  ++++ +G P  I+++ D  FTS+ W          +KFS  + PQTDGQ+ERT QT+E +LR        +W  H+ L++ +YNN    
Subjt:  TLDHIARLYVDKIVSQYGVPVSIVSNRDPRFTSKFWPSLQKAMGIGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKESWDTHLPLMEFAYNNGYQF

Query:  SIGKAPYEALY
        +    P+E ++
Subjt:  SIGKAPYEALY

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATCCAGGTTGCACCAAGATGTATAGAACTTTAAAGAAGACTTATTGGTGGCTTGGAATGAAGAAAGAGATAGCTGAATATGTTGATAGATGTTTGATTTGTCAACA
GGTTAAACCAGTAAGACAGAGGCTAGGAGGATTTCTTAATCCTTTGCCAGTGCCAGAGTGGAAGTGGAAGCATATTACTATAGATTTTCTGTTTGGATTACCTCGTACAT
CTAGTGAACATGATTGTATATGGGTAATAGTAGACAGACTCACCAAGACGACACGATTTATACCGGTTAAAGCAACATCTACGTTAGACCATATAGCTAGATTATATGTC
GATAAGATTGTGAGTCAGTATGGAGTACCAGTGTCCATAGTTTCAAATAGGGATCCGAGGTTTACTTCTAAATTTTGGCCTAGTTTACAGAAAGCAATGGGAATAGGACT
AAAGTTTAGTACATCATTTCATCCCCAAACAGATGGTCAGTCCGAGAGGACCATCCAAACTTTAGAGGACATGTTGAGAGCATGTGTCCTTCAACTTAAAGAAAGTTGGG
ATACCCACTTGCCACTTATGGAGTTTGCTTATAATAATGGCTATCAGTTTAGTATCGGTAAGGCACCATATGAGGCCTTATATGGAAGACCATGCAGAACTCCTGTGTGC
TGGAATGAAGTGGGAGAGTGGAAGTTAGTATCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCATCCAGGTTGCACCAAGATGTATAGAACTTTAAAGAAGACTTATTGGTGGCTTGGAATGAAGAAAGAGATAGCTGAATATGTTGATAGATGTTTGATTTGTCAACA
GGTTAAACCAGTAAGACAGAGGCTAGGAGGATTTCTTAATCCTTTGCCAGTGCCAGAGTGGAAGTGGAAGCATATTACTATAGATTTTCTGTTTGGATTACCTCGTACAT
CTAGTGAACATGATTGTATATGGGTAATAGTAGACAGACTCACCAAGACGACACGATTTATACCGGTTAAAGCAACATCTACGTTAGACCATATAGCTAGATTATATGTC
GATAAGATTGTGAGTCAGTATGGAGTACCAGTGTCCATAGTTTCAAATAGGGATCCGAGGTTTACTTCTAAATTTTGGCCTAGTTTACAGAAAGCAATGGGAATAGGACT
AAAGTTTAGTACATCATTTCATCCCCAAACAGATGGTCAGTCCGAGAGGACCATCCAAACTTTAGAGGACATGTTGAGAGCATGTGTCCTTCAACTTAAAGAAAGTTGGG
ATACCCACTTGCCACTTATGGAGTTTGCTTATAATAATGGCTATCAGTTTAGTATCGGTAAGGCACCATATGAGGCCTTATATGGAAGACCATGCAGAACTCCTGTGTGC
TGGAATGAAGTGGGAGAGTGGAAGTTAGTATCCTGA
Protein sequenceShow/hide protein sequence
MHPGCTKMYRTLKKTYWWLGMKKEIAEYVDRCLICQQVKPVRQRLGGFLNPLPVPEWKWKHITIDFLFGLPRTSSEHDCIWVIVDRLTKTTRFIPVKATSTLDHIARLYV
DKIVSQYGVPVSIVSNRDPRFTSKFWPSLQKAMGIGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKESWDTHLPLMEFAYNNGYQFSIGKAPYEALYGRPCRTPVC
WNEVGEWKLVS