; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc07g0189821 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc07g0189821
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag/pol protein
Genome locationCMiso1.1chr07:8594175..8594957
RNA-Seq ExpressionCmc07g0189821
SyntenyCmc07g0189821
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa]4.0e-13693.44Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVKLCTRLDICYAVG
        MKDLGEAQYVLGIQIIRDRKNK LALSQATYIDK+LVRYSMQNSKKGLLPFRHGVHLSKEQ PKTPQEVEDMRRIPYASAVGSLMY  LCTR DICYAVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVKLCTRLDICYAVG

Query:  IVSRYQSNPGLDHWTTVKIILKYLRRTKDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRNIKQGCIADSTMEAEYVAACEVAKKA
        IVSRYQSNPGLDHWT VKI+LKYLRRT+DYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWR+IKQGCIADSTMEAEYVAACE AK+A
Subjt:  IVSRYQSNPGLDHWTTVKIILKYLRRTKDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRNIKQGCIADSTMEAEYVAACEVAKKA

Query:  VWFRKFLHDLEVFPNMNWPITLYCDNSGAVANSKEPHSHKRGKHIEMKYHLIREIVQRG
        VW RKFLHDLEV PNMN PITLYCDNSGAVANSKEP SHKRGKHIE KYHLIREIVQRG
Subjt:  VWFRKFLHDLEVFPNMNWPITLYCDNSGAVANSKEPHSHKRGKHIEMKYHLIREIVQRG

KAA0042496.1 gag/pol protein [Cucumis melo var. makuwa]1.1e-13694.21Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVKLCTRLDICYAVG
        MKDLGEAQYVLGIQIIRDRKNK LALSQATYIDK+LVRYSMQNSKKGLLPFRHGVHLSKEQ PKTPQEVEDMRRIPYASAVGSLMYV LCTR DICYAVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVKLCTRLDICYAVG

Query:  IVSRYQSNPGLDHWTTVKIILKYLRRTKDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRNIKQGCIADSTMEAEYVAACEVAKKA
        IVSRYQSNPGLDHWT VKIILKYLRRT+DYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWR+IKQGCIADSTMEAEYVAACE AK+A
Subjt:  IVSRYQSNPGLDHWTTVKIILKYLRRTKDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRNIKQGCIADSTMEAEYVAACEVAKKA

Query:  VWFRKFLHDLEVFPNMNWPITLYCDNSGAVANSKEPHSHKRGKHIEMKYHLIREIVQRG
        VW RKFLHDLEV PNMN PITLYCDNSGAVANSKEP SHKRGKHIE KYHLIREIVQRG
Subjt:  VWFRKFLHDLEVFPNMNWPITLYCDNSGAVANSKEPHSHKRGKHIEMKYHLIREIVQRG

KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa]4.0e-13693.44Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVKLCTRLDICYAVG
        MKDLGEAQYVLGIQIIRDRKNK LALSQATYIDK+LVRYSMQNSKKGLLPFRHGVHLSKEQ PKTPQEVEDMRRIPYASAVGSLMY  LCTR DICYAVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVKLCTRLDICYAVG

Query:  IVSRYQSNPGLDHWTTVKIILKYLRRTKDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRNIKQGCIADSTMEAEYVAACEVAKKA
        IVSRYQSNPGLDHWT VKI+LKYLRRT+DYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWR+IKQGCIADSTMEAEYVAACE AK+A
Subjt:  IVSRYQSNPGLDHWTTVKIILKYLRRTKDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRNIKQGCIADSTMEAEYVAACEVAKKA

Query:  VWFRKFLHDLEVFPNMNWPITLYCDNSGAVANSKEPHSHKRGKHIEMKYHLIREIVQRG
        VW RKFLHDLEV PNMN PITLYCDNSGAVANSKEP SHKRGKHIE KYHLIREIVQRG
Subjt:  VWFRKFLHDLEVFPNMNWPITLYCDNSGAVANSKEPHSHKRGKHIEMKYHLIREIVQRG

KAA0061170.1 gag/pol protein [Cucumis melo var. makuwa]6.9e-13693.82Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVKLCTRLDICYAVG
        MKDLGEAQYVLGIQIIRDRKNK LALSQATYIDK+LVRYSMQNSKKGLLPFRHGVHLSKEQ PKTPQEVEDMRRIPYASAVGSLMY  LCTR DICYAVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVKLCTRLDICYAVG

Query:  IVSRYQSNPGLDHWTTVKIILKYLRRTKDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRNIKQGCIADSTMEAEYVAACEVAKKA
        IVSRYQSNPGLDHWTTVKIILKYLRRT+DYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLN GAVVWR+IKQGCIADSTMEAEYVAACE AK+A
Subjt:  IVSRYQSNPGLDHWTTVKIILKYLRRTKDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRNIKQGCIADSTMEAEYVAACEVAKKA

Query:  VWFRKFLHDLEVFPNMNWPITLYCDNSGAVANSKEPHSHKRGKHIEMKYHLIREIVQRG
        VW RKFLHDLEV PNMN PITLYCDNSGAVANSKEP SHKRGKHIE KYHLIREIVQRG
Subjt:  VWFRKFLHDLEVFPNMNWPITLYCDNSGAVANSKEPHSHKRGKHIEMKYHLIREIVQRG

KAA0064276.1 gag/pol protein [Cucumis melo var. makuwa]3.4e-135100Show/hide
Query:  MLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVKLCTRLDICYAVGIVSRYQSNPGLDHWTTVKIILK
        MLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVKLCTRLDICYAVGIVSRYQSNPGLDHWTTVKIILK
Subjt:  MLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVKLCTRLDICYAVGIVSRYQSNPGLDHWTTVKIILK

Query:  YLRRTKDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRNIKQGCIADSTMEAEYVAACEVAKKAVWFRKFLHDLEVFPNMNWPITL
        YLRRTKDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRNIKQGCIADSTMEAEYVAACEVAKKAVWFRKFLHDLEVFPNMNWPITL
Subjt:  YLRRTKDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRNIKQGCIADSTMEAEYVAACEVAKKAVWFRKFLHDLEVFPNMNWPITL

Query:  YCDNSGAVANSKEPHSHKRGKHIEMKYHLIREIVQRGM
        YCDNSGAVANSKEPHSHKRGKHIEMKYHLIREIVQRGM
Subjt:  YCDNSGAVANSKEPHSHKRGKHIEMKYHLIREIVQRGM

TrEMBL top hitse value%identityAlignment
A0A5A7TKM4 Gag/pol protein5.2e-13794.21Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVKLCTRLDICYAVG
        MKDLGEAQYVLGIQIIRDRKNK LALSQATYIDK+LVRYSMQNSKKGLLPFRHGVHLSKEQ PKTPQEVEDMRRIPYASAVGSLMYV LCTR DICYAVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVKLCTRLDICYAVG

Query:  IVSRYQSNPGLDHWTTVKIILKYLRRTKDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRNIKQGCIADSTMEAEYVAACEVAKKA
        IVSRYQSNPGLDHWT VKIILKYLRRT+DYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWR+IKQGCIADSTMEAEYVAACE AK+A
Subjt:  IVSRYQSNPGLDHWTTVKIILKYLRRTKDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRNIKQGCIADSTMEAEYVAACEVAKKA

Query:  VWFRKFLHDLEVFPNMNWPITLYCDNSGAVANSKEPHSHKRGKHIEMKYHLIREIVQRG
        VW RKFLHDLEV PNMN PITLYCDNSGAVANSKEP SHKRGKHIE KYHLIREIVQRG
Subjt:  VWFRKFLHDLEVFPNMNWPITLYCDNSGAVANSKEPHSHKRGKHIEMKYHLIREIVQRG

A0A5A7TZD0 Gag/pol protein2.0e-13693.44Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVKLCTRLDICYAVG
        MKDLGEAQYVLGIQIIRDRKNK LALSQATYIDK+LVRYSMQNSKKGLLPFRHGVHLSKEQ PKTPQEVEDMRRIPYASAVGSLMY  LCTR DICYAVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVKLCTRLDICYAVG

Query:  IVSRYQSNPGLDHWTTVKIILKYLRRTKDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRNIKQGCIADSTMEAEYVAACEVAKKA
        IVSRYQSNPGLDHWT VKI+LKYLRRT+DYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWR+IKQGCIADSTMEAEYVAACE AK+A
Subjt:  IVSRYQSNPGLDHWTTVKIILKYLRRTKDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRNIKQGCIADSTMEAEYVAACEVAKKA

Query:  VWFRKFLHDLEVFPNMNWPITLYCDNSGAVANSKEPHSHKRGKHIEMKYHLIREIVQRG
        VW RKFLHDLEV PNMN PITLYCDNSGAVANSKEP SHKRGKHIE KYHLIREIVQRG
Subjt:  VWFRKFLHDLEVFPNMNWPITLYCDNSGAVANSKEPHSHKRGKHIEMKYHLIREIVQRG

A0A5A7UYE8 Gag/pol protein2.0e-13693.44Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVKLCTRLDICYAVG
        MKDLGEAQYVLGIQIIRDRKNK LALSQATYIDK+LVRYSMQNSKKGLLPFRHGVHLSKEQ PKTPQEVEDMRRIPYASAVGSLMY  LCTR DICYAVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVKLCTRLDICYAVG

Query:  IVSRYQSNPGLDHWTTVKIILKYLRRTKDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRNIKQGCIADSTMEAEYVAACEVAKKA
        IVSRYQSNPGLDHWT VKI+LKYLRRT+DYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWR+IKQGCIADSTMEAEYVAACE AK+A
Subjt:  IVSRYQSNPGLDHWTTVKIILKYLRRTKDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRNIKQGCIADSTMEAEYVAACEVAKKA

Query:  VWFRKFLHDLEVFPNMNWPITLYCDNSGAVANSKEPHSHKRGKHIEMKYHLIREIVQRG
        VW RKFLHDLEV PNMN PITLYCDNSGAVANSKEP SHKRGKHIE KYHLIREIVQRG
Subjt:  VWFRKFLHDLEVFPNMNWPITLYCDNSGAVANSKEPHSHKRGKHIEMKYHLIREIVQRG

A0A5A7V1F5 Gag/pol protein3.3e-13693.82Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVKLCTRLDICYAVG
        MKDLGEAQYVLGIQIIRDRKNK LALSQATYIDK+LVRYSMQNSKKGLLPFRHGVHLSKEQ PKTPQEVEDMRRIPYASAVGSLMY  LCTR DICYAVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVKLCTRLDICYAVG

Query:  IVSRYQSNPGLDHWTTVKIILKYLRRTKDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRNIKQGCIADSTMEAEYVAACEVAKKA
        IVSRYQSNPGLDHWTTVKIILKYLRRT+DYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLN GAVVWR+IKQGCIADSTMEAEYVAACE AK+A
Subjt:  IVSRYQSNPGLDHWTTVKIILKYLRRTKDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRNIKQGCIADSTMEAEYVAACEVAKKA

Query:  VWFRKFLHDLEVFPNMNWPITLYCDNSGAVANSKEPHSHKRGKHIEMKYHLIREIVQRG
        VW RKFLHDLEV PNMN PITLYCDNSGAVANSKEP SHKRGKHIE KYHLIREIVQRG
Subjt:  VWFRKFLHDLEVFPNMNWPITLYCDNSGAVANSKEPHSHKRGKHIEMKYHLIREIVQRG

A0A5A7VD16 Gag/pol protein1.7e-135100Show/hide
Query:  MLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVKLCTRLDICYAVGIVSRYQSNPGLDHWTTVKIILK
        MLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVKLCTRLDICYAVGIVSRYQSNPGLDHWTTVKIILK
Subjt:  MLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVKLCTRLDICYAVGIVSRYQSNPGLDHWTTVKIILK

Query:  YLRRTKDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRNIKQGCIADSTMEAEYVAACEVAKKAVWFRKFLHDLEVFPNMNWPITL
        YLRRTKDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRNIKQGCIADSTMEAEYVAACEVAKKAVWFRKFLHDLEVFPNMNWPITL
Subjt:  YLRRTKDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRNIKQGCIADSTMEAEYVAACEVAKKAVWFRKFLHDLEVFPNMNWPITL

Query:  YCDNSGAVANSKEPHSHKRGKHIEMKYHLIREIVQRGM
        YCDNSGAVANSKEPHSHKRGKHIEMKYHLIREIVQRGM
Subjt:  YCDNSGAVANSKEPHSHKRGKHIEMKYHLIREIVQRGM

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.3e-3633.58Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHL----SKEQCPKTPQEVEDMRRIPYASAVGSLMYVKLCTRLDIC
        M DL E ++ +GI+I  + +   + LSQ+ Y+ K+L +++M+N      P    ++     S E C             P  S +G LMY+ LCTR D+ 
Subjt:  MKDLGEAQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHL----SKEQCPKTPQEVEDMRRIPYASAVGSLMYVKLCTRLDIC

Query:  YAVGIVSRYQSNPGLDHWTTVKIILKYLRRTKDYMLVYG---AKDLILTGYTDSDFQTDKDSRKSTSGSVFTL-NGGAVVWRNIKQGCIADSTMEAEYVA
         AV I+SRY S    + W  +K +L+YL+ T D  L++    A +  + GY DSD+   +  RKST+G +F + +   + W   +Q  +A S+ EAEY+A
Subjt:  YAVGIVSRYQSNPGLDHWTTVKIILKYLRRTKDYMLVYG---AKDLILTGYTDSDFQTDKDSRKSTSGSVFTL-NGGAVVWRNIKQGCIADSTMEAEYVA

Query:  ACEVAKKAVWFRKFLHDLEVFPNMNWPITLYCDNSGAVANSKEPHSHKRGKHIEMKYHLIREIVQRGM
          E  ++A+W +  L  + +   +  PI +Y DN G ++ +  P  HKR KHI++KYH  RE VQ  +
Subjt:  ACEVAKKAVWFRKFLHDLEVFPNMNWPITLYCDNSGAVANSKEPHSHKRGKHIEMKYHLIREIVQRGM

P0CV72 Secreted RxLR effector protein 1611.6e-2645.45Show/hide
Query:  MRRIPYASAVGSLMYVKLCTRLDICYAVGIVSRYQSNPGLDHWTTVKIILKYLRRTKDYMLVY-GAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGA
        M+ +PY SAVG++MY+ + TR D+  AVG++S++ S+P   HW  +K +L+YL+ T+ Y L +  A    L GY+D+D+  D +SR+STSG +F LNGG 
Subjt:  MRRIPYASAVGSLMYVKLCTRLDICYAVGIVSRYQSNPGLDHWTTVKIILKYLRRTKDYMLVY-GAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGA

Query:  VVWRNIKQGCIADSTMEAEYVAACEVAKKAVW
        V WR+ KQ  +A S+ E EY+A  E  ++AVW
Subjt:  VVWRNIKQGCIADSTMEAEYVAACEVAKKAVW

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.3e-6547.66Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVKLCTRLDICYAVG
        MKDLG AQ +LG++I+R+R ++ L LSQ  YI+++L R++M+N+K    P    + LSK+ CP T +E  +M ++PY+SAVGSLMY  +CTR DI +AVG
Subjt:  MKDLGEAQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVKLCTRLDICYAVG

Query:  IVSRYQSNPGLDHWTTVKIILKYLRRTKDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRNIKQGCIADSTMEAEYVAACEVAKKA
        +VSR+  NPG +HW  VK IL+YLR T    L +G  D IL GYTD+D   D D+RKS++G +FT +GGA+ W++  Q C+A ST EAEY+AA E  K+ 
Subjt:  IVSRYQSNPGLDHWTTVKIILKYLRRTKDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRNIKQGCIADSTMEAEYVAACEVAKKA

Query:  VWFRKFLHDLEVFPNMNWPITLYCDNSGAVANSKEPHSHKRGKHIEMKYHLIREIV
        +W ++FL +L +         +YCD+  A+  SK    H R KHI+++YH IRE+V
Subjt:  VWFRKFLHDLEVFPNMNWPITLYCDNSGAVANSKEPHSHKRGKHIEMKYHLIREIV

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE12.1e-2633.85Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVKLCTRLDICYAVG
        +KD  E  Y LGI+    R    L LSQ  YI  +L R +M  +K    P      LS     K     E      Y   VGSL Y+   TR DI YAV 
Subjt:  MKDLGEAQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVKLCTRLDICYAVG

Query:  IVSRYQSNPGLDHWTTVKIILKYLRRTKDY-MLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRNIKQGCIADSTMEAEYVAACEVAKK
         +S++   P  +H   +K IL+YL  T ++ + +     L L  Y+D+D+  DKD   ST+G +  L    + W + KQ  +  S+ EAEY +    + +
Subjt:  IVSRYQSNPGLDHWTTVKIILKYLRRTKDY-MLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRNIKQGCIADSTMEAEYVAACEVAKK

Query:  AVWFRKFLHDLEVFPNMNWPITLYCDNSGAVANSKEPHSHKRGKHIEMKYHLIREIVQRG
          W    L +L +   +  P  +YCDN GA      P  H R KHI + YH IR  VQ G
Subjt:  AVWFRKFLHDLEVFPNMNWPITLYCDNSGAVANSKEPHSHKRGKHIEMKYHLIREIVQRG

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.7e-2833.08Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVKLCTRLDICYAVG
        +K+  +  Y LGI+    R  + L LSQ  Y   +L R +M  +K    P      L+     K P   E      Y   VGSL Y+   TR D+ YAV 
Subjt:  MKDLGEAQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVKLCTRLDICYAVG

Query:  IVSRYQSNPGLDHWTTVKIILKYLRRTKDY-MLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRNIKQGCIADSTMEAEYVAACEVAKK
         +S+Y   P  DHW  +K +L+YL  T D+ + +     L L  Y+D+D+  D D   ST+G +  L    + W + KQ  +  S+ EAEY +    + +
Subjt:  IVSRYQSNPGLDHWTTVKIILKYLRRTKDY-MLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRNIKQGCIADSTMEAEYVAACEVAKK

Query:  AVWFRKFLHDLEVFPNMNWPITLYCDNSGAVANSKEPHSHKRGKHIEMKYHLIREIVQRG
          W    L +L +   ++ P  +YCDN GA      P  H R KHI + YH IR  VQ G
Subjt:  AVWFRKFLHDLEVFPNMNWPITLYCDNSGAVANSKEPHSHKRGKHIEMKYHLIREIVQRG

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 89.6e-2730.2Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVKLCTRLDICYAVG
        ++DLG  +Y LG++I R      + + Q  Y   +L    +   K   +P    V  S      +  +  D +   Y   +G LMY+++ TRLDI +AV 
Subjt:  MKDLGEAQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVKLCTRLDICYAVG

Query:  IVSRYQSNPGLDHWTTVKIILKYLRRTKDYMLVYGAK-DLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRNIKQGCIADSTMEAEYVAACEVAKK
         +S++   P L H   V  IL Y++ T    L Y ++ ++ L  ++D+ FQ+ KD+R+ST+G    L    + W++ KQ  ++ S+ EAEY A      +
Subjt:  IVSRYQSNPGLDHWTTVKIILKYLRRTKDYMLVYGAK-DLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRNIKQGCIADSTMEAEYVAACEVAKK

Query:  AVWFRKFLHDLEVFPNMNWPITLYCDNSGAVANSKEPHSHKRGKHIEMKYHLIRE
         +W  +F  +L++   ++ P  L+CDN+ A+  +     H+R KHIE   H +RE
Subjt:  AVWFRKFLHDLEVFPNMNWPITLYCDNSGAVANSKEPHSHKRGKHIEMKYHLIRE

ATMG00810.1 DNA/RNA polymerases superfamily protein3.2e-1431.22Show/hide
Query:  MKDLGEAQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSK--KGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVKLCTRLDICYA
        MKDLG   Y LGIQI        L LSQ  Y +++L    M + K     LP +    +S  + P    +  D R     S VG+L Y+ L TR DI YA
Subjt:  MKDLGEAQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSK--KGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVKLCTRLDICYA

Query:  VGIVSRYQSNPGLDHWTTVKIILKYLRRTKDY-MLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRNIKQGCIADSTMEAEYVAACEVA
        V IV +    P L  +  +K +L+Y++ T  + + ++    L +  + DSD+     +R+ST+G    L    + W   +Q  ++ S+ E EY A    A
Subjt:  VGIVSRYQSNPGLDHWTTVKIILKYLRRTKDY-MLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRNIKQGCIADSTMEAEYVAACEVA

Query:  KKAVW
         +  W
Subjt:  KKAVW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGATTTAGGAGAGGCACAATATGTTCTTGGAATCCAAATCATAAGGGATCGTAAGAACAAAATGCTAGCATTGTCTCAAGCAACCTATATCGACAAAATGTTGGT
TCGATATTCGATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGGGTTCACTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGAC
GTATTCCCTATGCCTCAGCTGTGGGCAGCTTAATGTATGTTAAGCTCTGCACTAGGCTAGACATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAGTCCAACCCAGGG
TTAGACCATTGGACGACGGTTAAAATTATTCTCAAGTATCTTAGGAGAACGAAAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTC
TGATTTCCAAACCGATAAGGATTCTAGGAAATCCACATCGGGATCAGTGTTTACCCTAAATGGGGGAGCTGTAGTATGGCGTAACATCAAGCAAGGATGCATTGCAGACT
CTACAATGGAGGCTGAATACGTCGCTGCTTGTGAAGTAGCAAAAAAAGCAGTTTGGTTTAGGAAGTTCCTACATGATTTGGAAGTTTTTCCAAACATGAACTGGCCCATC
ACTCTATATTGTGATAACAGTGGGGCAGTAGCCAATTCTAAAGAACCTCACAGCCATAAACGAGGGAAACACATAGAGATGAAGTATCACCTGATACGAGAGATTGTGCA
ACGAGGGATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGATTTAGGAGAGGCACAATATGTTCTTGGAATCCAAATCATAAGGGATCGTAAGAACAAAATGCTAGCATTGTCTCAAGCAACCTATATCGACAAAATGTTGGT
TCGATATTCGATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGGGTTCACTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGAC
GTATTCCCTATGCCTCAGCTGTGGGCAGCTTAATGTATGTTAAGCTCTGCACTAGGCTAGACATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAGTCCAACCCAGGG
TTAGACCATTGGACGACGGTTAAAATTATTCTCAAGTATCTTAGGAGAACGAAAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTC
TGATTTCCAAACCGATAAGGATTCTAGGAAATCCACATCGGGATCAGTGTTTACCCTAAATGGGGGAGCTGTAGTATGGCGTAACATCAAGCAAGGATGCATTGCAGACT
CTACAATGGAGGCTGAATACGTCGCTGCTTGTGAAGTAGCAAAAAAAGCAGTTTGGTTTAGGAAGTTCCTACATGATTTGGAAGTTTTTCCAAACATGAACTGGCCCATC
ACTCTATATTGTGATAACAGTGGGGCAGTAGCCAATTCTAAAGAACCTCACAGCCATAAACGAGGGAAACACATAGAGATGAAGTATCACCTGATACGAGAGATTGTGCA
ACGAGGGATGTGA
Protein sequenceShow/hide protein sequence
MKDLGEAQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVKLCTRLDICYAVGIVSRYQSNPG
LDHWTTVKIILKYLRRTKDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRNIKQGCIADSTMEAEYVAACEVAKKAVWFRKFLHDLEVFPNMNWPI
TLYCDNSGAVANSKEPHSHKRGKHIEMKYHLIREIVQRGM