| GenBank top hits | e value | %identity | Alignment |
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| AQY61295.1 Pol [Coffea arabica] | 2.2e-65 | 81.46 | Show/hide |
Query: MDKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVLYLSAIGALMYLANNTRPDITFSVNLLARYNSSPTKRHWNGVKHVLRYLRGTIDIGLFYSNKS
MDKAH L+ PMVVRSLD KD FRPRE+NEE+LGPEV YLSAIGALMYLAN TRPDI+F+VNLLAR++SSPT+RHWNG+KH+ RYL+GTID+GLFYSNKS
Subjt: MDKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVLYLSAIGALMYLANNTRPDITFSVNLLARYNSSPTKRHWNGVKHVLRYLRGTIDIGLFYSNKS
Query: NFDLVGYADAGYLSDPHKARSQTGYLFTCGGTAISWRSVKQTMTATSSNHA
+LVGYADAGYLSDPHKARSQTGYLFT GGTAISWRS KQ++ ATSSNHA
Subjt: NFDLVGYADAGYLSDPHKARSQTGYLFTCGGTAISWRSVKQTMTATSSNHA
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| KAA0038947.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 6.1e-76 | 95.36 | Show/hide |
Query: MDKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVLYLSAIGALMYLANNTRPDITFSVNLLARYNSSPTKRHWNGVKHVLRYLRGTIDIGLFYSNKS
MDKAH LNIPMVVRSLDVKKDIFRPREDNEELLGPEV YL+AIGALMYLANNTRPDI+FSVNLLARY+SSPTKRHWN VKHVLRYLRGTIDIGLFYSNKS
Subjt: MDKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVLYLSAIGALMYLANNTRPDITFSVNLLARYNSSPTKRHWNGVKHVLRYLRGTIDIGLFYSNKS
Query: NFDLVGYADAGYLSDPHKARSQTGYLFTCGGTAISWRSVKQTMTATSSNHA
NFDLVGYADAGYLSDP KARSQTGYLFTCGGTAISWRSVKQTMTATSSNHA
Subjt: NFDLVGYADAGYLSDPHKARSQTGYLFTCGGTAISWRSVKQTMTATSSNHA
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| KAA0067250.1 Pol [Cucumis melo var. makuwa] | 4.4e-74 | 94.04 | Show/hide |
Query: MDKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVLYLSAIGALMYLANNTRPDITFSVNLLARYNSSPTKRHWNGVKHVLRYLRGTIDIGLFYSNKS
MDKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEV YLSAIGALM LANNTRPDI FSVNLLARY+SSPTKRHWNGVKHVLRYLRGTID+ LFYSNKS
Subjt: MDKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVLYLSAIGALMYLANNTRPDITFSVNLLARYNSSPTKRHWNGVKHVLRYLRGTIDIGLFYSNKS
Query: NFDLVGYADAGYLSDPHKARSQTGYLFTCGGTAISWRSVKQTMTATSSNHA
NFDLVGYADAGYLSDP KARSQ GYLFT GGTAISWRSVKQTMTATSSNHA
Subjt: NFDLVGYADAGYLSDPHKARSQTGYLFTCGGTAISWRSVKQTMTATSSNHA
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| KAF7137709.1 hypothetical protein RHSIM_Rhsim07G0041900 [Rhododendron simsii] | 2.8e-65 | 80.13 | Show/hide |
Query: MDKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVLYLSAIGALMYLANNTRPDITFSVNLLARYNSSPTKRHWNGVKHVLRYLRGTIDIGLFYSNKS
MDKAHPL+ PMVVRSLDV KD FRP E+ E++LGPEV Y+SAIGALMYLAN TRPDI FSVNLLARY+S+PT+RHW G+KH+ RYLRGTID+GLFYSN S
Subjt: MDKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVLYLSAIGALMYLANNTRPDITFSVNLLARYNSSPTKRHWNGVKHVLRYLRGTIDIGLFYSNKS
Query: NFDLVGYADAGYLSDPHKARSQTGYLFTCGGTAISWRSVKQTMTATSSNHA
L+GYADAGYLSDPHKARSQTGY+FTCGG AISWRSVKQT+TATSSNH+
Subjt: NFDLVGYADAGYLSDPHKARSQTGYLFTCGGTAISWRSVKQTMTATSSNHA
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| TYK21506.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.1e-69 | 94.33 | Show/hide |
Query: MVVRSLDVKKDIFRPREDNEELLGPEVLYLSAIGALMYLANNTRPDITFSVNLLARYNSSPTKRHWNGVKHVLRYLRGTIDIGLFYSNKSNFDLVGYADA
M+VRSLDVKKDIFRPREDNEELLGPEV YLSAIGALMYLANNTRPDI FSVNLLARY+ SPTKRHWNGVKHVLRYLRGTID+GLFYSNKSNFDLVGYADA
Subjt: MVVRSLDVKKDIFRPREDNEELLGPEVLYLSAIGALMYLANNTRPDITFSVNLLARYNSSPTKRHWNGVKHVLRYLRGTIDIGLFYSNKSNFDLVGYADA
Query: GYLSDPHKARSQTGYLFTCGGTAISWRSVKQTMTATSSNHA
G+LSDPHKARSQTGYLFTC GTAISWRSVKQTMTATSSNHA
Subjt: GYLSDPHKARSQTGYLFTCGGTAISWRSVKQTMTATSSNHA
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A2N9FK49 Reverse transcriptase Ty1/copia-type domain-containing protein | 9.5e-67 | 84.77 | Show/hide |
Query: MDKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVLYLSAIGALMYLANNTRPDITFSVNLLARYNSSPTKRHWNGVKHVLRYLRGTIDIGLFYSNKS
MDKAHPL+ PMVVRSLDVKKD FRP+E EE LGPEV YLSAIGALMYLAN TRPDI FSVNLLARY+S+PT RHWNGVKHVLRYLRGT D+GLFY NKS
Subjt: MDKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVLYLSAIGALMYLANNTRPDITFSVNLLARYNSSPTKRHWNGVKHVLRYLRGTIDIGLFYSNKS
Query: NFDLVGYADAGYLSDPHKARSQTGYLFTCGGTAISWRSVKQTMTATSSNHA
N LVGYADAGYLSDPHK RSQTGYLFTCG TAISWRSVKQT++ATSSNH+
Subjt: NFDLVGYADAGYLSDPHKARSQTGYLFTCGGTAISWRSVKQTMTATSSNHA
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| A0A2N9J4G7 Reverse transcriptase Ty1/copia-type domain-containing protein | 9.5e-67 | 84.77 | Show/hide |
Query: MDKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVLYLSAIGALMYLANNTRPDITFSVNLLARYNSSPTKRHWNGVKHVLRYLRGTIDIGLFYSNKS
MDKAHPL+ PMVVRSLDVKKD FRP+E EE LGPEV YLSAIGALMYLAN TRPDI FSVNLLARY+S+PT RHWNGVKHVLRYLRGT D+GLFY NKS
Subjt: MDKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVLYLSAIGALMYLANNTRPDITFSVNLLARYNSSPTKRHWNGVKHVLRYLRGTIDIGLFYSNKS
Query: NFDLVGYADAGYLSDPHKARSQTGYLFTCGGTAISWRSVKQTMTATSSNHA
N LVGYADAGYLSDPHK RSQTGYLFTCG TAISWRSVKQT++ATSSNH+
Subjt: NFDLVGYADAGYLSDPHKARSQTGYLFTCGGTAISWRSVKQTMTATSSNHA
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| A0A5D3CGU0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.9e-76 | 95.36 | Show/hide |
Query: MDKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVLYLSAIGALMYLANNTRPDITFSVNLLARYNSSPTKRHWNGVKHVLRYLRGTIDIGLFYSNKS
MDKAH LNIPMVVRSLDVKKDIFRPREDNEELLGPEV YL+AIGALMYLANNTRPDI+FSVNLLARY+SSPTKRHWN VKHVLRYLRGTIDIGLFYSNKS
Subjt: MDKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVLYLSAIGALMYLANNTRPDITFSVNLLARYNSSPTKRHWNGVKHVLRYLRGTIDIGLFYSNKS
Query: NFDLVGYADAGYLSDPHKARSQTGYLFTCGGTAISWRSVKQTMTATSSNHA
NFDLVGYADAGYLSDP KARSQTGYLFTCGGTAISWRSVKQTMTATSSNHA
Subjt: NFDLVGYADAGYLSDPHKARSQTGYLFTCGGTAISWRSVKQTMTATSSNHA
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| A0A5D3CKU4 Pol | 2.1e-74 | 94.04 | Show/hide |
Query: MDKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVLYLSAIGALMYLANNTRPDITFSVNLLARYNSSPTKRHWNGVKHVLRYLRGTIDIGLFYSNKS
MDKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEV YLSAIGALM LANNTRPDI FSVNLLARY+SSPTKRHWNGVKHVLRYLRGTID+ LFYSNKS
Subjt: MDKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVLYLSAIGALMYLANNTRPDITFSVNLLARYNSSPTKRHWNGVKHVLRYLRGTIDIGLFYSNKS
Query: NFDLVGYADAGYLSDPHKARSQTGYLFTCGGTAISWRSVKQTMTATSSNHA
NFDLVGYADAGYLSDP KARSQ GYLFT GGTAISWRSVKQTMTATSSNHA
Subjt: NFDLVGYADAGYLSDPHKARSQTGYLFTCGGTAISWRSVKQTMTATSSNHA
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| A0A5D3DD63 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.4e-70 | 94.33 | Show/hide |
Query: MVVRSLDVKKDIFRPREDNEELLGPEVLYLSAIGALMYLANNTRPDITFSVNLLARYNSSPTKRHWNGVKHVLRYLRGTIDIGLFYSNKSNFDLVGYADA
M+VRSLDVKKDIFRPREDNEELLGPEV YLSAIGALMYLANNTRPDI FSVNLLARY+ SPTKRHWNGVKHVLRYLRGTID+GLFYSNKSNFDLVGYADA
Subjt: MVVRSLDVKKDIFRPREDNEELLGPEVLYLSAIGALMYLANNTRPDITFSVNLLARYNSSPTKRHWNGVKHVLRYLRGTIDIGLFYSNKSNFDLVGYADA
Query: GYLSDPHKARSQTGYLFTCGGTAISWRSVKQTMTATSSNHA
G+LSDPHKARSQTGYLFTC GTAISWRSVKQTMTATSSNHA
Subjt: GYLSDPHKARSQTGYLFTCGGTAISWRSVKQTMTATSSNHA
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 4.3e-16 | 40.35 | Show/hide |
Query: SAIGALMYLANNTRPDITFSVNLLARYNSSPTKRHWNGVKHVLRYLRGTIDIGLFYSNKSNFD--LVGYADAGYLSDPHKARSQTGYLFTC-GGTAISWR
S IG LMY+ TRPD+T +VN+L+RY+S W +K VLRYL+GTID+ L + F+ ++GY D+ + +S TGYLF I W
Subjt: SAIGALMYLANNTRPDITFSVNLLARYNSSPTKRHWNGVKHVLRYLRGTIDIGLFYSNKSNFD--LVGYADAGYLSDPHKARSQTGYLFTC-GGTAISWR
Query: SVKQTMTATSSNHA
+ +Q A SS A
Subjt: SVKQTMTATSSNHA
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| P0CV72 Secreted RxLR effector protein 161 | 1.5e-21 | 46.43 | Show/hide |
Query: VLYLSAIGALMYLANNTRPDITFSVNLLARYNSSPTKRHWNGVKHVLRYLRGTIDIGLFYSNKSNFDLVGYADAGYLSDPHKARSQTGYLFTCGGTAISW
V YLSA+GA+MYL TRPD+ +V +L+++ S P HW +K VLRYL+ T GL ++ LVGY+DA + D RS +GYLF G +SW
Subjt: VLYLSAIGALMYLANNTRPDITFSVNLLARYNSSPTKRHWNGVKHVLRYLRGTIDIGLFYSNKSNFDLVGYADAGYLSDPHKARSQTGYLFTCGGTAISW
Query: RSVKQTMTATSS
RS KQ A SS
Subjt: RSVKQTMTATSS
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.4e-19 | 40.4 | Show/hide |
Query: MDKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVLYLSAIGALMYLANNTRPDITFSVNLLARYNSSPTKRHWNGVKHVLRYLRGTIDIGLFYSNKS
M A P++ P+ KK P E+ +V Y SA+G+LMY TRPDI +V +++R+ +P K HW VK +LRYLRGT L + S
Subjt: MDKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVLYLSAIGALMYLANNTRPDITFSVNLLARYNSSPTKRHWNGVKHVLRYLRGTIDIGLFYSNKS
Query: NFDLVGYADAGYLSDPHKARSQTGYLFTCGGTAISWRSVKQTMTATSSNHA
+ L GY DA D +S TGYLFT G AISW+S Q A S+ A
Subjt: NFDLVGYADAGYLSDPHKARSQTGYLFTCGGTAISWRSVKQTMTATSSNHA
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.8e-14 | 38.94 | Show/hide |
Query: YLSAIGALMYLANNTRPDITFSVNLLARYNSSPTKRHWNGVKHVLRYLRGTIDIGLFYSNKSNFDLVGYADAGYLSDPHKARSQTGYLFTCGGTAISWRS
Y +G+L YLA TRPDI+++VN L+++ PT+ H +K +LRYL GT + G+F + L Y+DA + D S GY+ G ISW S
Subjt: YLSAIGALMYLANNTRPDITFSVNLLARYNSSPTKRHWNGVKHVLRYLRGTIDIGLFYSNKSNFDLVGYADAGYLSDPHKARSQTGYLFTCGGTAISWRS
Query: VKQTMTATSSNHA
KQ SS A
Subjt: VKQTMTATSSNHA
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 3.9e-17 | 42.48 | Show/hide |
Query: YLSAIGALMYLANNTRPDITFSVNLLARYNSSPTKRHWNGVKHVLRYLRGTIDIGLFYSNKSNFDLVGYADAGYLSDPHKARSQTGYLFTCGGTAISWRS
Y +G+L YLA TRPD++++VN L++Y PT HWN +K VLRYL GT D G+F + L Y+DA + D S GY+ G ISW S
Subjt: YLSAIGALMYLANNTRPDITFSVNLLARYNSSPTKRHWNGVKHVLRYLRGTIDIGLFYSNKSNFDLVGYADAGYLSDPHKARSQTGYLFTCGGTAISWRS
Query: VKQTMTATSSNHA
KQ SS A
Subjt: VKQTMTATSSNHA
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 1.5e-16 | 39.82 | Show/hide |
Query: YLSAIGALMYLANNTRPDITFSVNLLARYNSSPTKRHWNGVKHVLRYLRGTIDIGLFYSNKSNFDLVGYADAGYLSDPHKARSQTGYLFTCGGTAISWRS
Y IG LMYL TR DI+F+VN L++++ +P H V +L Y++GT+ GLFYS+++ L ++DA + S RS GY G + ISW+S
Subjt: YLSAIGALMYLANNTRPDITFSVNLLARYNSSPTKRHWNGVKHVLRYLRGTIDIGLFYSNKSNFDLVGYADAGYLSDPHKARSQTGYLFTCGGTAISWRS
Query: VKQTMTATSSNHA
KQ + + SS A
Subjt: VKQTMTATSSNHA
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| ATMG00240.1 Gag-Pol-related retrotransposon family protein | 3.3e-11 | 43.04 | Show/hide |
Query: MYLANNTRPDITFSVNLLARYNSSPTKRHWNGVKHVLRYLRGTIDIGLFYSNKSNFDLVGYADAGYLSDPHKARSQTGY
MYL TRPD+TF+VN L++++S+ V VL Y++GT+ GLFYS S+ L +AD+ + S P RS TG+
Subjt: MYLANNTRPDITFSVNLLARYNSSPTKRHWNGVKHVLRYLRGTIDIGLFYSNKSNFDLVGYADAGYLSDPHKARSQTGY
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 3.0e-12 | 34.55 | Show/hide |
Query: YLSAIGALMYLANNTRPDITFSVNLLARYNSSPTKRHWNGVKHVLRYLRGTIDIGLFYSNKSNFDLVGYADAGYLSDPHKARSQTGYLFTCGGTAISWRS
+ S +GAL YL TRPDI+++VN++ + PT ++ +K VLRY++GTI GL+ S ++ + D+ + RS TG+ G ISW +
Subjt: YLSAIGALMYLANNTRPDITFSVNLLARYNSSPTKRHWNGVKHVLRYLRGTIDIGLFYSNKSNFDLVGYADAGYLSDPHKARSQTGYLFTCGGTAISWRS
Query: VKQTMTATSS
+Q + SS
Subjt: VKQTMTATSS
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