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Cmc07g0190201 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc07g0190201
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionAutophagy-related protein
Genome locationCMiso1.1chr07:9218307..9222333
RNA-Seq ExpressionCmc07g0190201
SyntenyCmc07g0190201
Gene Ontology termsGO:0006914 - autophagy (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR004241 - Autophagy protein Atg8 ubiquitin-like
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6780927.1 hypothetical protein POTOM_013806 [Populus tomentosa]2.0e-1554.95Show/hide
Query:  VIVEKVERSDIPNIDKKKYLVPADLTI------------------------------GSLMSAIYDERKDEDEFLYVTYSRENTFGCRLPL
        VIVEK ERSDIPNIDKKKYLVPADLT+                              G++MSAIY+E+KDED FLYVTYS ENTFG ++PL
Subjt:  VIVEKVERSDIPNIDKKKYLVPADLTI------------------------------GSLMSAIYDERKDEDEFLYVTYSRENTFGCRLPL

KVH95513.1 Autophagy protein Atg8 ubiquitin-like protein [Cynara cardunculus var. scolymus]2.6e-1883.93Show/hide
Query:  VIVEKVERSDIPNIDKKKYLVPADLTIGSLMSAIYDERKDEDEFLYVTYSRENTFG
        VIVEK ERSD+PNIDKKKYLVPADLT+G++MSAIY+E+KDED FLYVTYS ENTFG
Subjt:  VIVEKVERSDIPNIDKKKYLVPADLTIGSLMSAIYDERKDEDEFLYVTYSRENTFG

XP_008391211.1 autophagy-related protein 8f [Malus domestica]9.1e-1656.04Show/hide
Query:  VIVEKVERSDIPNIDKKKYLVPADLTI------------------------------GSLMSAIYDERKDEDEFLYVTYSRENTFGCRLPL
        VIVEKVERSDIPNIDKKKYLVPADLT+                              G++MSAIY+E+KDED FLYVTYS ENTFG ++PL
Subjt:  VIVEKVERSDIPNIDKKKYLVPADLTI------------------------------GSLMSAIYDERKDEDEFLYVTYSRENTFGCRLPL

XP_011018299.1 PREDICTED: autophagy-related protein 8f-like [Populus euphratica]2.0e-1554.95Show/hide
Query:  VIVEKVERSDIPNIDKKKYLVPADLTI------------------------------GSLMSAIYDERKDEDEFLYVTYSRENTFGCRLPL
        VIVEK ERSDIPNIDKKKYLVPADLT+                              G++MSAIY+E+KDED FLYVTYS ENTFG ++PL
Subjt:  VIVEKVERSDIPNIDKKKYLVPADLTI------------------------------GSLMSAIYDERKDEDEFLYVTYSRENTFGCRLPL

XP_011033957.1 PREDICTED: autophagy-related protein 8f [Populus euphratica]2.0e-1554.95Show/hide
Query:  VIVEKVERSDIPNIDKKKYLVPADLTI------------------------------GSLMSAIYDERKDEDEFLYVTYSRENTFGCRLPL
        VIVEK ERSDIPNIDKKKYLVPADLT+                              G++MSAIY+E+KDED FLYVTYS ENTFG ++PL
Subjt:  VIVEKVERSDIPNIDKKKYLVPADLTI------------------------------GSLMSAIYDERKDEDEFLYVTYSRENTFGCRLPL

TrEMBL top hitse value%identityAlignment
A0A103XRE3 Autophagy-related protein1.2e-1883.93Show/hide
Query:  VIVEKVERSDIPNIDKKKYLVPADLTIGSLMSAIYDERKDEDEFLYVTYSRENTFG
        VIVEK ERSD+PNIDKKKYLVPADLT+G++MSAIY+E+KDED FLYVTYS ENTFG
Subjt:  VIVEKVERSDIPNIDKKKYLVPADLTIGSLMSAIYDERKDEDEFLYVTYSRENTFG

A0A438IW87 Autophagy-related protein9.8e-1654.44Show/hide
Query:  VIVEKVERSDIPNIDKKKYLVPADLTI------------------------------GSLMSAIYDERKDEDEFLYVTYSRENTFGCRLP
        VIVEK ERSDIPNIDKKKYLVPADLT+                              G++MS IYDE+KD D FLYVTYS ENTFGC++P
Subjt:  VIVEKVERSDIPNIDKKKYLVPADLTI------------------------------GSLMSAIYDERKDEDEFLYVTYSRENTFGCRLP

A0A498JQ66 Autophagy-related protein4.4e-1656.04Show/hide
Query:  VIVEKVERSDIPNIDKKKYLVPADLTI------------------------------GSLMSAIYDERKDEDEFLYVTYSRENTFGCRLPL
        VIVEKVERSDIPNIDKKKYLVPADLT+                              G++MSAIY+E+KDED FLYVTYS ENTFG ++PL
Subjt:  VIVEKVERSDIPNIDKKKYLVPADLTI------------------------------GSLMSAIYDERKDEDEFLYVTYSRENTFGCRLPL

A0A540NQC8 Autophagy-related protein4.4e-1656.04Show/hide
Query:  VIVEKVERSDIPNIDKKKYLVPADLTI------------------------------GSLMSAIYDERKDEDEFLYVTYSRENTFGCRLPL
        VIVEKVERSDIPNIDKKKYLVPADLT+                              G++MSAIY+E+KDED FLYVTYS ENTFG ++PL
Subjt:  VIVEKVERSDIPNIDKKKYLVPADLTI------------------------------GSLMSAIYDERKDEDEFLYVTYSRENTFGCRLPL

A0A5N5HX63 Autophagy-related protein4.4e-1656.04Show/hide
Query:  VIVEKVERSDIPNIDKKKYLVPADLTI------------------------------GSLMSAIYDERKDEDEFLYVTYSRENTFGCRLPL
        VIVEKVERSDIPNIDKKKYLVPADLT+                              G++MSAIY+E+KDED FLYVTYS ENTFG ++PL
Subjt:  VIVEKVERSDIPNIDKKKYLVPADLTI------------------------------GSLMSAIYDERKDEDEFLYVTYSRENTFGCRLPL

SwissProt top hitse value%identityAlignment
A2XXR7 Autophagy-related protein 8B1.2e-1554.65Show/hide
Query:  VIVEKVERSDIPNIDKKKYLVPADLTIG------------------------------SLMSAIYDERKDEDEFLYVTYSRENTFG
        VIVEK ERSDIP+IDKKKYLVPADLT+G                              +LMSAIY+E KDED FLY+TYS ENTFG
Subjt:  VIVEKVERSDIPNIDKKKYLVPADLTIG------------------------------SLMSAIYDERKDEDEFLYVTYSRENTFG

A2YS06 Autophagy-related protein 8C1.2e-1554.65Show/hide
Query:  VIVEKVERSDIPNIDKKKYLVPADLTIG------------------------------SLMSAIYDERKDEDEFLYVTYSRENTFG
        VIVEK ERSDIP+IDKKKYLVPADLT+G                              +LMSAIY+E KDED FLY+TYS ENTFG
Subjt:  VIVEKVERSDIPNIDKKKYLVPADLTIG------------------------------SLMSAIYDERKDEDEFLYVTYSRENTFG

Q6Z1D5 Autophagy-related protein 8C1.2e-1554.65Show/hide
Query:  VIVEKVERSDIPNIDKKKYLVPADLTIG------------------------------SLMSAIYDERKDEDEFLYVTYSRENTFG
        VIVEK ERSDIP+IDKKKYLVPADLT+G                              +LMSAIY+E KDED FLY+TYS ENTFG
Subjt:  VIVEKVERSDIPNIDKKKYLVPADLTIG------------------------------SLMSAIYDERKDEDEFLYVTYSRENTFG

Q7XPR1 Autophagy-related protein 8B1.2e-1554.65Show/hide
Query:  VIVEKVERSDIPNIDKKKYLVPADLTIG------------------------------SLMSAIYDERKDEDEFLYVTYSRENTFG
        VIVEK ERSDIP+IDKKKYLVPADLT+G                              +LMSAIY+E KDED FLY+TYS ENTFG
Subjt:  VIVEKVERSDIPNIDKKKYLVPADLTIG------------------------------SLMSAIYDERKDEDEFLYVTYSRENTFG

Q8S927 Autophagy-related protein 8c5.6e-1653.49Show/hide
Query:  VIVEKVERSDIPNIDKKKYLVPADLTIG------------------------------SLMSAIYDERKDEDEFLYVTYSRENTFG
        VIVE+ ERSD+PNIDKKKYLVPADLT+G                              ++MSAIYDE KDED FLY+TYS ENTFG
Subjt:  VIVEKVERSDIPNIDKKKYLVPADLTIG------------------------------SLMSAIYDERKDEDEFLYVTYSRENTFG

Arabidopsis top hitse value%identityAlignment
AT1G62040.1 Ubiquitin-like superfamily protein4.0e-1753.49Show/hide
Query:  VIVEKVERSDIPNIDKKKYLVPADLTIG------------------------------SLMSAIYDERKDEDEFLYVTYSRENTFG
        VIVE+ ERSD+PNIDKKKYLVPADLT+G                              ++MSAIYDE KDED FLY+TYS ENTFG
Subjt:  VIVEKVERSDIPNIDKKKYLVPADLTIG------------------------------SLMSAIYDERKDEDEFLYVTYSRENTFG

AT1G62040.2 Ubiquitin-like superfamily protein4.0e-1753.49Show/hide
Query:  VIVEKVERSDIPNIDKKKYLVPADLTIG------------------------------SLMSAIYDERKDEDEFLYVTYSRENTFG
        VIVE+ ERSD+PNIDKKKYLVPADLT+G                              ++MSAIYDE KDED FLY+TYS ENTFG
Subjt:  VIVEKVERSDIPNIDKKKYLVPADLTIG------------------------------SLMSAIYDERKDEDEFLYVTYSRENTFG

AT3G60640.1 Ubiquitin-like superfamily protein2.0e-1653.49Show/hide
Query:  VIVEKVERSDIPNIDKKKYLVPADLTI------------------------------GSLMSAIYDERKDEDEFLYVTYSRENTFG
        VIVEK E+SDIPNIDKKKYLVPADLT+                              G++MS IYDE K+ED FLYVTYS ENTFG
Subjt:  VIVEKVERSDIPNIDKKKYLVPADLTI------------------------------GSLMSAIYDERKDEDEFLYVTYSRENTFG

AT4G16520.1 Ubiquitin-like superfamily protein2.0e-1650Show/hide
Query:  VIVEKVERSDIPNIDKKKYLVPADLTI------------------------------GSLMSAIYDERKDEDEFLYVTYSRENTFGCRLP
        VIVEK E+SDIP IDKKKYLVPADLT+                              G+LMS++Y+E+KD+D FLYVTYS ENTFG   P
Subjt:  VIVEKVERSDIPNIDKKKYLVPADLTI------------------------------GSLMSAIYDERKDEDEFLYVTYSRENTFGCRLP

AT4G16520.2 Ubiquitin-like superfamily protein2.0e-1650Show/hide
Query:  VIVEKVERSDIPNIDKKKYLVPADLTI------------------------------GSLMSAIYDERKDEDEFLYVTYSRENTFGCRLP
        VIVEK E+SDIP IDKKKYLVPADLT+                              G+LMS++Y+E+KD+D FLYVTYS ENTFG   P
Subjt:  VIVEKVERSDIPNIDKKKYLVPADLTI------------------------------GSLMSAIYDERKDEDEFLYVTYSRENTFGCRLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGGGAGAAGGTAATTGTGGAGAAGGTAGAAAGAAGTGATATTCCCAACATTGACAAGAAAAAGTATCTAGTGCCTGCTGACCTGACTATTGGATCACTGATGTC
TGCAATCTATGATGAGAGGAAGGATGAGGATGAGTTTCTCTATGTTACATATAGTAGAGAGAACACGTTTGGATGCCGTTTACCATTGTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATTCAAAGCCCTAGATGTGTCTCTGCCCCTTTTGAAATTGCAAGTTCCACCAAATCCCTCACTTTTGCTGTGTTCACCGTTCGTCCGTCCCCGTTCACCATCGTGTTCCA
CCTCTCCAAAAACGCGTACCAGATTCTTTACATTCTGTTCGTCCGTCCAACTCTCTGCCTGACATTTCCCTCTCCGATTATCTGCCTGCCGCCGTCTTCGACTCTCTCTC
TGTCGCCCTATTTTTATCTCTCTCGTCTTCCTCTCAATCTACATTTTGGTTTTTAATCGTAGCTTGTGGTTTGTCACATTACAACCTGAAGAGTTCTTTCTCGTCTGTTC
AAGGAATTCAACTTGCTCTTCTTAGTTATCAACTTGTGTGTTGTATTATCTTTTAGAGTTGAACTATTTACAACTCTCTCAATTCAGTTGCAAGGTGGTAAATTTGATCA
CACTGATCATTGGATGTTTTTGGATATTTCTGGTGCTTGGAATCAAGTTCTAGAAGATATGAGTGATTTGAAGGAATTAGTACAACAACGTGCCACACAAGATCAAATTG
CCTACTTTGGTCAAACTCCATCTCAACTTCTGACTGTGCCTCATTTGAGGAAGAAGCCCTTAGCTGATGTTTTTCATCTGTAGGGAAGCGACGAAGGTGTCCTCTCTTCT
TTCTTTGCTTGAGGGTATATTCTTATGGAGGGGGAGAAGGTAATTGTGGAGAAGGTAGAAAGAAGTGATATTCCCAACATTGACAAGAAAAAGTATCTAGTGCCTGCTGA
CCTGACTATTGGATCACTGATGTCTGCAATCTATGATGAGAGGAAGGATGAGGATGAGTTTCTCTATGTTACATATAGTAGAGAGAACACGTTTGGATGCCGTTTACCAT
TGTTCTGAAACTTTGTTGTGGTTGCCATTCTGAAAATTTATGTATATAGATGTGAAACTTTATTTATATAGATGGTATACTTTTGGGCTAAGTTAGTTAATTAGAGGATG
TTGAGTTGAATTCTTGGAAATTTGATGGAATTGTTTATATTAGTTTTGTAAATGATATGAATATTTGCAAAGTTTTGGAAATGATATGGTGAAAGGTTTTATATTTGATG
AACATTTTCGTTTATATGTATTTATG
Protein sequenceShow/hide protein sequence
MEGEKVIVEKVERSDIPNIDKKKYLVPADLTIGSLMSAIYDERKDEDEFLYVTYSRENTFGCRLPLF