; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc07g0190331 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc07g0190331
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationCMiso1.1chr07:9420638..9420985
RNA-Seq ExpressionCmc07g0190331
SyntenyCmc07g0190331
Gene Ontology termsGO:0000209 - protein polyubiquitination (biological process)
GO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0007034 - vacuolar transport (biological process)
GO:0009052 - pentose-phosphate shunt, non-oxidative branch (biological process)
GO:0015074 - DNA integration (biological process)
GO:0098869 - cellular oxidant detoxification (biological process)
GO:0005768 - endosome (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004601 - peroxidase activity (molecular function)
GO:0004751 - ribose-5-phosphate isomerase activity (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037155.1 peroxidase 64 [Cucumis melo var. makuwa]1.0e-4377.39Show/hide
Query:  MEEHIHHSELVFEVLREHKLYANKKKCNFTFQRAEYLSHIVSGQAVEVDPEKIRSIKQWPVTSNMRELRGFLGLTGYYWRFVQNYGSIAAPLTQLLKLRT
        MEEH +H ELV EVLREHKLYANKKKCNF +Q+ EYL HIVSG+ VEVDPEKIRSIKQWPV  N  E+RG LGLTGYY RFVQNYGSIAAPLTQ+LKL  
Subjt:  MEEHIHHSELVFEVLREHKLYANKKKCNFTFQRAEYLSHIVSGQAVEVDPEKIRSIKQWPVTSNMRELRGFLGLTGYYWRFVQNYGSIAAPLTQLLKLRT

Query:  FRWSEEAQLAFERLK
        F+W++EAQLAF RL+
Subjt:  FRWSEEAQLAFERLK

KAA0047225.1 reverse transcriptase [Cucumis melo var. makuwa]3.7e-4173.04Show/hide
Query:  MEEHIHHSELVFEVLREHKLYANKKKCNFTFQRAEYLSHIVSGQAVEVDPEKIRSIKQWPVTSNMRELRGFLGLTGYYWRFVQNYGSIAAPLTQLLKLRT
        M+EH+ H E+V EVLREHKLYANKKKC+F +QR EYL HIVS + VEVDP+KIRSIKQ PV +N+RE+RGFLGLTGYY RF+Q+YGSIAAPLTQLLKL  
Subjt:  MEEHIHHSELVFEVLREHKLYANKKKCNFTFQRAEYLSHIVSGQAVEVDPEKIRSIKQWPVTSNMRELRGFLGLTGYYWRFVQNYGSIAAPLTQLLKLRT

Query:  FRWSEEAQLAFERLK
        F+W+++AQLAF RL+
Subjt:  FRWSEEAQLAFERLK

KAA0061363.1 peroxidase 64 [Cucumis melo var. makuwa]8.0e-4479.65Show/hide
Query:  MEEHIHHSELVFEVLREHKLYANKKKCNFTFQRAEYLSHIVSGQAVEVDPEKIRSIKQWPVTSNMRELRGFLGLTGYYWRFVQNYGSIAAPLTQLLKLRT
        MEEHI+H ELV EVLREHKLYANKKKC+F FQ+ EYL HIVSGQ VEVDPEK RSIKQW V +N+REL GFLGL GYY RFVQNYGSI APLTQLLKL  
Subjt:  MEEHIHHSELVFEVLREHKLYANKKKCNFTFQRAEYLSHIVSGQAVEVDPEKIRSIKQWPVTSNMRELRGFLGLTGYYWRFVQNYGSIAAPLTQLLKLRT

Query:  FRWSEEAQLAFER
        F+W+EEAQLAF+R
Subjt:  FRWSEEAQLAFER

KAA0068083.1 peroxidase 64 [Cucumis melo var. makuwa]6.3e-4179.13Show/hide
Query:  MEEHIHHSELVFEVLREHKLYANKKKCNFTFQRAEYLSHIVSGQAVEVDPEKIRSIKQWPVTSNMRELRGFLGLTGYYWRFVQNYGSIAAPLTQLLKLRT
        +EEHI+H ELV EVLREHKLYAN KKC+F FQ+ EYL HIVS Q VEVDPEKIRSIKQW V +N+RELRGFLGLTGY  RFVQNYGSIAAPLTQLLKL  
Subjt:  MEEHIHHSELVFEVLREHKLYANKKKCNFTFQRAEYLSHIVSGQAVEVDPEKIRSIKQWPVTSNMRELRGFLGLTGYYWRFVQNYGSIAAPLTQLLKLRT

Query:  FRWSEEAQLAFERLK
        F+W+EEA LAF+RLK
Subjt:  FRWSEEAQLAFERLK

TYK21761.1 Transposon Tf2-6 polyprotein [Cucumis melo var. makuwa]3.7e-4173.04Show/hide
Query:  MEEHIHHSELVFEVLREHKLYANKKKCNFTFQRAEYLSHIVSGQAVEVDPEKIRSIKQWPVTSNMRELRGFLGLTGYYWRFVQNYGSIAAPLTQLLKLRT
        M+EH+ H E+V EVLREHKLYANKKKC+F +QR EYL HIVS + VEVDP+KIRSIKQ PV +N+RE+RGFLGLTGYY RF+Q+YGSIAAPLTQLLKL  
Subjt:  MEEHIHHSELVFEVLREHKLYANKKKCNFTFQRAEYLSHIVSGQAVEVDPEKIRSIKQWPVTSNMRELRGFLGLTGYYWRFVQNYGSIAAPLTQLLKLRT

Query:  FRWSEEAQLAFERLK
        F+W+++AQLAF RL+
Subjt:  FRWSEEAQLAFERLK

TrEMBL top hitse value%identityAlignment
A0A5A7T6Q1 Peroxidase 645.0e-4477.39Show/hide
Query:  MEEHIHHSELVFEVLREHKLYANKKKCNFTFQRAEYLSHIVSGQAVEVDPEKIRSIKQWPVTSNMRELRGFLGLTGYYWRFVQNYGSIAAPLTQLLKLRT
        MEEH +H ELV EVLREHKLYANKKKCNF +Q+ EYL HIVSG+ VEVDPEKIRSIKQWPV  N  E+RG LGLTGYY RFVQNYGSIAAPLTQ+LKL  
Subjt:  MEEHIHHSELVFEVLREHKLYANKKKCNFTFQRAEYLSHIVSGQAVEVDPEKIRSIKQWPVTSNMRELRGFLGLTGYYWRFVQNYGSIAAPLTQLLKLRT

Query:  FRWSEEAQLAFERLK
        F+W++EAQLAF RL+
Subjt:  FRWSEEAQLAFERLK

A0A5A7U0Q5 Reverse transcriptase1.8e-4173.04Show/hide
Query:  MEEHIHHSELVFEVLREHKLYANKKKCNFTFQRAEYLSHIVSGQAVEVDPEKIRSIKQWPVTSNMRELRGFLGLTGYYWRFVQNYGSIAAPLTQLLKLRT
        M+EH+ H E+V EVLREHKLYANKKKC+F +QR EYL HIVS + VEVDP+KIRSIKQ PV +N+RE+RGFLGLTGYY RF+Q+YGSIAAPLTQLLKL  
Subjt:  MEEHIHHSELVFEVLREHKLYANKKKCNFTFQRAEYLSHIVSGQAVEVDPEKIRSIKQWPVTSNMRELRGFLGLTGYYWRFVQNYGSIAAPLTQLLKLRT

Query:  FRWSEEAQLAFERLK
        F+W+++AQLAF RL+
Subjt:  FRWSEEAQLAFERLK

A0A5A7VJ08 Peroxidase 643.1e-4179.13Show/hide
Query:  MEEHIHHSELVFEVLREHKLYANKKKCNFTFQRAEYLSHIVSGQAVEVDPEKIRSIKQWPVTSNMRELRGFLGLTGYYWRFVQNYGSIAAPLTQLLKLRT
        +EEHI+H ELV EVLREHKLYAN KKC+F FQ+ EYL HIVS Q VEVDPEKIRSIKQW V +N+RELRGFLGLTGY  RFVQNYGSIAAPLTQLLKL  
Subjt:  MEEHIHHSELVFEVLREHKLYANKKKCNFTFQRAEYLSHIVSGQAVEVDPEKIRSIKQWPVTSNMRELRGFLGLTGYYWRFVQNYGSIAAPLTQLLKLRT

Query:  FRWSEEAQLAFERLK
        F+W+EEA LAF+RLK
Subjt:  FRWSEEAQLAFERLK

A0A5D3CU29 Peroxidase 643.9e-4479.65Show/hide
Query:  MEEHIHHSELVFEVLREHKLYANKKKCNFTFQRAEYLSHIVSGQAVEVDPEKIRSIKQWPVTSNMRELRGFLGLTGYYWRFVQNYGSIAAPLTQLLKLRT
        MEEHI+H ELV EVLREHKLYANKKKC+F FQ+ EYL HIVSGQ VEVDPEK RSIKQW V +N+REL GFLGL GYY RFVQNYGSI APLTQLLKL  
Subjt:  MEEHIHHSELVFEVLREHKLYANKKKCNFTFQRAEYLSHIVSGQAVEVDPEKIRSIKQWPVTSNMRELRGFLGLTGYYWRFVQNYGSIAAPLTQLLKLRT

Query:  FRWSEEAQLAFER
        F+W+EEAQLAF+R
Subjt:  FRWSEEAQLAFER

A0A5D3DDL8 Transposon Tf2-6 polyprotein1.8e-4173.04Show/hide
Query:  MEEHIHHSELVFEVLREHKLYANKKKCNFTFQRAEYLSHIVSGQAVEVDPEKIRSIKQWPVTSNMRELRGFLGLTGYYWRFVQNYGSIAAPLTQLLKLRT
        M+EH+ H E+V EVLREHKLYANKKKC+F +QR EYL HIVS + VEVDP+KIRSIKQ PV +N+RE+RGFLGLTGYY RF+Q+YGSIAAPLTQLLKL  
Subjt:  MEEHIHHSELVFEVLREHKLYANKKKCNFTFQRAEYLSHIVSGQAVEVDPEKIRSIKQWPVTSNMRELRGFLGLTGYYWRFVQNYGSIAAPLTQLLKLRT

Query:  FRWSEEAQLAFERLK
        F+W+++AQLAF RL+
Subjt:  FRWSEEAQLAFERLK

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.68.6e-1735.9Show/hide
Query:  MEEHIHHSELVFEVLREHKLYANKKKCNFTFQRAEYLSHIVSGQAVEVDPEKIRSIKQWPVTSNMRELRGFLGLTGYYWRFVQNYGSIAAPLTQLLK--L
        ++EH+    LVFE L +  L     KC F  Q   +L H+++   ++ +PEKI +I+++P+ +  +E++ FLGLTGYY +F+ N+  IA P+T+ LK  +
Subjt:  MEEHIHHSELVFEVLREHKLYANKKKCNFTFQRAEYLSHIVSGQAVEVDPEKIRSIKQWPVTSNMRELRGFLGLTGYYWRFVQNYGSIAAPLTQLLK--L

Query:  RTFRWSEEAQLAFERLK
        +    + E   AF++LK
Subjt:  RTFRWSEEAQLAFERLK

P10401 Retrovirus-related Pol polyprotein from transposon gypsy2.9e-1233.68Show/hide
Query:  EHIHHSELVFEVLREHKLYANKKKCNFTFQRAEYLSHIVSGQAVEVDPEKIRSIKQWPVTSNMRELRGFLGLTGYYWRFVQNYGSIAAPLTQLLK
        +H+ H + V + L +  +  +++K  F  +  EYL  IVS    + DPEK+++I+++P    + ++R FLGL  YY  F++++ +IA P+T +LK
Subjt:  EHIHHSELVFEVLREHKLYANKKKCNFTFQRAEYLSHIVSGQAVEVDPEKIRSIKQWPVTSNMRELRGFLGLTGYYWRFVQNYGSIAAPLTQLLK

P20825 Retrovirus-related Pol polyprotein from transposon 2973.0e-1738.46Show/hide
Query:  MEEHIHHSELVFEVLREHKLYANKKKCNFTFQRAEYLSHIVSGQAVEVDPEKIRSIKQWPVTSNMRELRGFLGLTGYYWRFVQNYGSIAAPLTQLLKLRT
        + EH++  +LVF  L +  L     KC F  + A +L HIV+   ++ +P K+++I  +P+ +  +E+R FLGLTGYY +F+ NY  IA P+T  LK RT
Subjt:  MEEHIHHSELVFEVLREHKLYANKKKCNFTFQRAEYLSHIVSGQAVEVDPEKIRSIKQWPVTSNMRELRGFLGLTGYYWRFVQNYGSIAAPLTQLLKLRT

Query:  FRWSEEAQL--AFERLK
           +++ +   AFE+LK
Subjt:  FRWSEEAQL--AFERLK

P92523 Uncharacterized mitochondrial protein AtMg008602.7e-2649.56Show/hide
Query:  IHHSELVFEVLREHKLYANKKKCNFTFQRAEYLS--HIVSGQAVEVDPEKIRSIKQWPVTSNMRELRGFLGLTGYYWRFVQNYGSIAAPLTQLLKLRTFR
        ++H  +V ++  +H+ YAN+KKC F   +  YL   HI+SG+ V  DP K+ ++  WP   N  ELRGFLGLTGYY RFV+NYG I  PLT+LLK  + +
Subjt:  IHHSELVFEVLREHKLYANKKKCNFTFQRAEYLS--HIVSGQAVEVDPEKIRSIKQWPVTSNMRELRGFLGLTGYYWRFVQNYGSIAAPLTQLLKLRTFR

Query:  WSEEAQLAFERLK
        W+E A LAF+ LK
Subjt:  WSEEAQLAFERLK

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus1.5e-1335.42Show/hide
Query:  EEHIHHSELVFEVLREHKLYANKKKCNFTFQRAEYLSHIVSGQAVEVDPEKIRSIKQWPVTSNMRELRGFLGLTGYYWRFVQNYGSIAAPLTQLLK
        + H  +  LV   L +  L  N +K +F   + E+L +IV+   ++ DP+K+R+I + P  ++++EL+ FLG+T YY +F+Q+Y  +A PLT L +
Subjt:  EEHIHHSELVFEVLREHKLYANKKKCNFTFQRAEYLSHIVSGQAVEVDPEKIRSIKQWPVTSNMRELRGFLGLTGYYWRFVQNYGSIAAPLTQLLK

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein1.9e-2749.56Show/hide
Query:  IHHSELVFEVLREHKLYANKKKCNFTFQRAEYLS--HIVSGQAVEVDPEKIRSIKQWPVTSNMRELRGFLGLTGYYWRFVQNYGSIAAPLTQLLKLRTFR
        ++H  +V ++  +H+ YAN+KKC F   +  YL   HI+SG+ V  DP K+ ++  WP   N  ELRGFLGLTGYY RFV+NYG I  PLT+LLK  + +
Subjt:  IHHSELVFEVLREHKLYANKKKCNFTFQRAEYLS--HIVSGQAVEVDPEKIRSIKQWPVTSNMRELRGFLGLTGYYWRFVQNYGSIAAPLTQLLKLRTFR

Query:  WSEEAQLAFERLK
        W+E A LAF+ LK
Subjt:  WSEEAQLAFERLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAGCATATACATCATTCAGAGTTGGTATTTGAAGTATTACGGGAACATAAACTCTATGCTAATAAGAAGAAGTGCAACTTCACATTTCAAAGAGCGGAGTATCT
TAGCCATATCGTTTCAGGTCAAGCAGTAGAGGTTGACCCGGAGAAGATAAGATCCATTAAACAATGGCCAGTGACTTCAAACATGAGAGAATTGAGGGGATTCTTGGGGC
TCACTGGTTACTATTGGAGGTTTGTACAAAATTATGGGTCCATTGCTGCTCCATTAACTCAGTTGTTGAAATTGAGGACTTTTAGATGGAGTGAAGAAGCTCAATTGGCT
TTTGAAAGACTGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAGCATATACATCATTCAGAGTTGGTATTTGAAGTATTACGGGAACATAAACTCTATGCTAATAAGAAGAAGTGCAACTTCACATTTCAAAGAGCGGAGTATCT
TAGCCATATCGTTTCAGGTCAAGCAGTAGAGGTTGACCCGGAGAAGATAAGATCCATTAAACAATGGCCAGTGACTTCAAACATGAGAGAATTGAGGGGATTCTTGGGGC
TCACTGGTTACTATTGGAGGTTTGTACAAAATTATGGGTCCATTGCTGCTCCATTAACTCAGTTGTTGAAATTGAGGACTTTTAGATGGAGTGAAGAAGCTCAATTGGCT
TTTGAAAGACTGAAGTAA
Protein sequenceShow/hide protein sequence
MEEHIHHSELVFEVLREHKLYANKKKCNFTFQRAEYLSHIVSGQAVEVDPEKIRSIKQWPVTSNMRELRGFLGLTGYYWRFVQNYGSIAAPLTQLLKLRTFRWSEEAQLA
FERLK