| GenBank top hits | e value | %identity | Alignment |
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| KAG8473177.1 hypothetical protein CXB51_035100 [Gossypium anomalum] | 7.9e-45 | 51.45 | Show/hide |
Query: MIEKQTDKEIKYLKTNNSLEFRGEFFNVFYMENGITRHKAVRYTPQQNRVSERLNRIIMERVRCLLSNAILEEKFWAKVVVYAMYTLKKSPHISLGFLTP
MIEKQT K+IKYL+T+N LEF + FN Y GI RH VR+TPQQN V+ER+NR IME+VRC+LSNA L + FWA+ A + + +SP +++ TP
Subjt: MIEKQTDKEIKYLKTNNSLEFRGEFFNVFYMENGITRHKAVRYTPQQNRVSERLNRIIMERVRCLLSNAILEEKFWAKVVVYAMYTLKKSPHISLGFLTP
Query: KEKWSKHRPNLNDLKVFGCVGYVHQNQGKLKARATKCMFVGFTKWVKGFKMWHPTDKKFIISRDVHFKEIRCL
+E WS + N +DLK+FGC Y H N GKL+ R+ KC+F+G+ VKG+K+W P ++K +ISRD+ F E L
Subjt: KEKWSKHRPNLNDLKVFGCVGYVHQNQGKLKARATKCMFVGFTKWVKGFKMWHPTDKKFIISRDVHFKEIRCL
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| KAG8487564.1 hypothetical protein CXB51_018489 [Gossypium anomalum] | 7.2e-46 | 52.6 | Show/hide |
Query: MIEKQTDKEIKYLKTNNSLEFRGEFFNVFYMENGITRHKAVRYTPQQNRVSERLNRIIMERVRCLLSNAILEEKFWAKVVVYAMYTLKKSPHISLGFLTP
MIEKQT K+IKYL+T+N LEF + FN FY GI RH VR+TPQQN V+ER+NR IME+VRC+LSNA L + FWA+ A + + +SP +++ TP
Subjt: MIEKQTDKEIKYLKTNNSLEFRGEFFNVFYMENGITRHKAVRYTPQQNRVSERLNRIIMERVRCLLSNAILEEKFWAKVVVYAMYTLKKSPHISLGFLTP
Query: KEKWSKHRPNLNDLKVFGCVGYVHQNQGKLKARATKCMFVGFTKWVKGFKMWHPTDKKFIISRDVHFKEIRCL
+E WS + N +DLK+FGC Y H N GKL+ R+ KC+F+G+ VKG+K+W P ++K +ISRDV F E L
Subjt: KEKWSKHRPNLNDLKVFGCVGYVHQNQGKLKARATKCMFVGFTKWVKGFKMWHPTDKKFIISRDVHFKEIRCL
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| KAG8499522.1 hypothetical protein CXB51_006046 [Gossypium anomalum] | 7.9e-45 | 52.02 | Show/hide |
Query: MIEKQTDKEIKYLKTNNSLEFRGEFFNVFYMENGITRHKAVRYTPQQNRVSERLNRIIMERVRCLLSNAILEEKFWAKVVVYAMYTLKKSPHISLGFLTP
MIEKQT K+IKYL+T+N LEF + FN GI RH VR+TPQQN V+ER+NR IME+VRC+LSNA L + FWA+ A + + +SP +++ TP
Subjt: MIEKQTDKEIKYLKTNNSLEFRGEFFNVFYMENGITRHKAVRYTPQQNRVSERLNRIIMERVRCLLSNAILEEKFWAKVVVYAMYTLKKSPHISLGFLTP
Query: KEKWSKHRPNLNDLKVFGCVGYVHQNQGKLKARATKCMFVGFTKWVKGFKMWHPTDKKFIISRDVHFKEIRCL
+E WS + N +DLK+FGC Y H N GKL+ R+ KC+F+G+ VKG+K+W P ++KF+ISRDV F E L
Subjt: KEKWSKHRPNLNDLKVFGCVGYVHQNQGKLKARATKCMFVGFTKWVKGFKMWHPTDKKFIISRDVHFKEIRCL
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| XP_038885954.1 uncharacterized protein LOC120076257 [Benincasa hispida] | 1.5e-48 | 66.42 | Show/hide |
Query: ENGITRHKAVRYTPQQNRVSERLNRIIMERVRCLLSNAILEEKFWAKVVVYAMYTLKKSPHISLGFLTPKEKWSKHRPNLNDLKVFGCVGYVHQNQGKLK
ENGITRHK VRYTPQQN V ERLNR IMERVR LS+ IL E +W + Y +YTL + P+ SL FLT +EKW+ H PNL++LKVFGCVG+VHQN+GKLK
Subjt: ENGITRHKAVRYTPQQNRVSERLNRIIMERVRCLLSNAILEEKFWAKVVVYAMYTLKKSPHISLGFLTPKEKWSKHRPNLNDLKVFGCVGYVHQNQGKLK
Query: ARATKCMFVGFTKWVKGFKMWHPTDKKFIISRDVHFK
A+ KCMFVGFT+ VKG+KMWHP ++KFI+SRD+ F+
Subjt: ARATKCMFVGFTKWVKGFKMWHPTDKKFIISRDVHFK
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| XP_038904504.1 uncharacterized protein LOC120090876 [Benincasa hispida] | 5.3e-49 | 61.18 | Show/hide |
Query: SLEFRGEFFNVFYMENGITRHKAVRYTPQQNRVSERLNRIIMERVRCLLSNAILEEKFWAKVVVYAMYTLKKSPHISLGFLTPKEKWSKHRPNLNDLKVF
SL E FN F E ITRH+ +R+T Q+N V+ERLNR IMERVRCLLS+A L EK+WA+ Y ++TL + PH SL LT +EKW+KH PNL +L+VF
Subjt: SLEFRGEFFNVFYMENGITRHKAVRYTPQQNRVSERLNRIIMERVRCLLSNAILEEKFWAKVVVYAMYTLKKSPHISLGFLTPKEKWSKHRPNLNDLKVF
Query: GCVGYVHQNQGKLKARATKCMFVGFTKWVKGFKMWHPTDKKFIISRDVHFKE
GCVGY+HQ+QGKLK+R KCMFVGF++ VKGFKMW+P +K+FI+S+DV F+E
Subjt: GCVGYVHQNQGKLKARATKCMFVGFTKWVKGFKMWHPTDKKFIISRDVHFKE
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A5A7U2U7 Retrotransposon protein, putative, Ty1-copia sub-class | 2.2e-40 | 50.59 | Show/hide |
Query: IEKQTDKEIKYLKTNNSLEFRGEFFNVFYMENGITRHKAVRYTPQQNRVSERLNRIIMERVRCLLSNAILEEKFWAKVVVYAMYTLKKSPHISLGFLTPK
+E QT +++KYL+T+N LEF FN F GITRH V YTPQQN ++ER NR IMER RCLL+NA L KFW + A Y + +SP +L TP+
Subjt: IEKQTDKEIKYLKTNNSLEFRGEFFNVFYMENGITRHKAVRYTPQQNRVSERLNRIIMERVRCLLSNAILEEKFWAKVVVYAMYTLKKSPHISLGFLTPK
Query: EKWSKHRPNLNDLKVFGCVGYVHQNQGKLKARATKCMFVGFTKWVKGFKMW--HPTDKKFIISRDVHFKE
E W+ P+L L+VFGC Y H GKL RA KCMF+G+ + VKG+K+W K IISRDV F E
Subjt: EKWSKHRPNLNDLKVFGCVGYVHQNQGKLKARATKCMFVGFTKWVKGFKMW--HPTDKKFIISRDVHFKE
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| A0A5D3BMV3 Copia-like retrotransposable element | 8.6e-45 | 73.95 | Show/hide |
Query: MERVRCLLSNAILEEKFWAKVVVYAMYTLKKSPHISLGFLTPKEKWSKHRPNLNDLKVFGCVGYVHQNQGKLKARATKCMFVGFTKWVKGFKMWHPTDKK
M+RVRCLLS+AILE+K W +VV Y +YTL +SPH SL FLTPKE+W+KH PNLNDLKVFGCV YVHQ+QGK KA+ATKCMFVGF K VK FK+WH DKK
Subjt: MERVRCLLSNAILEEKFWAKVVVYAMYTLKKSPHISLGFLTPKEKWSKHRPNLNDLKVFGCVGYVHQNQGKLKARATKCMFVGFTKWVKGFKMWHPTDKK
Query: FIISRDVHFKEIRCLCKGK
FIISRDVHFKE + KGK
Subjt: FIISRDVHFKEIRCLCKGK
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| A0A5D3DNU1 Putative gag-pol polyprotein | 2.2e-40 | 50.59 | Show/hide |
Query: IEKQTDKEIKYLKTNNSLEFRGEFFNVFYMENGITRHKAVRYTPQQNRVSERLNRIIMERVRCLLSNAILEEKFWAKVVVYAMYTLKKSPHISLGFLTPK
+E QT +++KYL+T+N LEF FN F GITRH V YTPQQN ++ER NR IMER RCLL+NA L KFW + A Y + +SP +L TP+
Subjt: IEKQTDKEIKYLKTNNSLEFRGEFFNVFYMENGITRHKAVRYTPQQNRVSERLNRIIMERVRCLLSNAILEEKFWAKVVVYAMYTLKKSPHISLGFLTPK
Query: EKWSKHRPNLNDLKVFGCVGYVHQNQGKLKARATKCMFVGFTKWVKGFKMW--HPTDKKFIISRDVHFKE
E W+ P+L L+VFGC Y H GKL RA KCMF+G+ + VKG+K+W K IISRDV F E
Subjt: EKWSKHRPNLNDLKVFGCVGYVHQNQGKLKARATKCMFVGFTKWVKGFKMW--HPTDKKFIISRDVHFKE
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| A0A6V7P941 Integrase catalytic domain-containing protein | 6.6e-45 | 52.33 | Show/hide |
Query: IEKQTDKEIKYLKTNNSLEFRGEFFNVFYMENGITRHKAVRYTPQQNRVSERLNRIIMERVRCLLSNAILEEKFWAKVVVYAMYTLKKSPHISLGFLTPK
IEKQT K+IK+L+T+N LEF FN F + GI RH+ V YTPQQN V+ER+NR ++E+ RCLLSNA E+FWA+ A Y + +SP S+ TPK
Subjt: IEKQTDKEIKYLKTNNSLEFRGEFFNVFYMENGITRHKAVRYTPQQNRVSERLNRIIMERVRCLLSNAILEEKFWAKVVVYAMYTLKKSPHISLGFLTPK
Query: EKWSKHRPNLNDLKVFGCVGYVHQNQGKLKARATKCMFVGFTKWVKGFKMWHPTDKKFIISRDVHFKEIRCL
E WS H P+ +DL++FGC Y H +Q KLK R+ +C F+G+ KGF++W P DKK IISRDV F E L
Subjt: EKWSKHRPNLNDLKVFGCVGYVHQNQGKLKARATKCMFVGFTKWVKGFKMWHPTDKKFIISRDVHFKEIRCL
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| W9RE40 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.5e-41 | 50.29 | Show/hide |
Query: MIEKQTDKEIKYLKTNNSLEFRGEFFNVFYMENGITRHKAVRYTPQQNRVSERLNRIIMERVRCLLSNAILEEKFWAKVVVYAMYTLKKSPHISLGFLTP
MIE QT K+IK L+T+N LEF G+ FN F + + RHK VR TPQQN ++ER+NR ++ERVRC+L A L ++FW +VV A Y + + P ++ F TP
Subjt: MIEKQTDKEIKYLKTNNSLEFRGEFFNVFYMENGITRHKAVRYTPQQNRVSERLNRIIMERVRCLLSNAILEEKFWAKVVVYAMYTLKKSPHISLGFLTP
Query: KEKWSKHRPNLNDLKVFGCVGYVHQNQGKLKARATKCMFVGFTKWVKGFKMW--HPTDKKFIISRDVHFKE
+E W+ + N +LKVFGC Y HQ +GKL RA KCMFVG+ + VKG+K+W + K ISRDV F+E
Subjt: KEKWSKHRPNLNDLKVFGCVGYVHQNQGKLKARATKCMFVGFTKWVKGFKMW--HPTDKKFIISRDVHFKE
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 8.0e-24 | 37.13 | Show/hide |
Query: EKQTDKEIKYLKTNNSLEFRGEFFNVFYMENGITRHKAVRYTPQQNRVSERLNRIIMERVRCLLSNAILEEKFWAKVVVYAMYTLKKSPHISL--GFLTP
E + ++ YL +N E+ F ++ GI+ H V +TPQ N VSER+ R I E+ R ++S A L++ FW + V+ A Y + + P +L TP
Subjt: EKQTDKEIKYLKTNNSLEFRGEFFNVFYMENGITRHKAVRYTPQQNRVSERLNRIIMERVRCLLSNAILEEKFWAKVVVYAMYTLKKSPHISL--GFLTP
Query: KEKWSKHRPNLNDLKVFGCVGYVH--QNQGKLKARATKCMFVGFTKWVKGFKMWHPTDKKFIISRDV
E W +P L L+VFG YVH QGK ++ K +FVG+ GFK+W ++KFI++RDV
Subjt: KEKWSKHRPNLNDLKVFGCVGYVH--QNQGKLKARATKCMFVGFTKWVKGFKMWHPTDKKFIISRDV
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.8e-28 | 36.05 | Show/hide |
Query: MIEKQTDKEIKYLKTNNSLEFRGEFFNVFYMENGITRHKAVRYTPQQNRVSERLNRIIMERVRCLLSNAILEEKFWAKVVVYAMYTLKKSPHISLGFLTP
++E++T +++K L+++N E+ F + +GI K V TPQ N V+ER+NR I+E+VR +L A L + FW + V A Y + +SP + L F P
Subjt: MIEKQTDKEIKYLKTNNSLEFRGEFFNVFYMENGITRHKAVRYTPQQNRVSERLNRIIMERVRCLLSNAILEEKFWAKVVVYAMYTLKKSPHISLGFLTP
Query: KEKWSKHRPNLNDLKVFGCVGYVH---QNQGKLKARATKCMFVGFTKWVKGFKMWHPTDKKFIISRDVHFKE
+ W+ + + LKVFGC + H + + KL ++ C+F+G+ G+++W P KK I SRDV F+E
Subjt: KEKWSKHRPNLNDLKVFGCVGYVH---QNQGKLKARATKCMFVGFTKWVKGFKMWHPTDKKFIISRDVHFKE
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| P92512 Uncharacterized mitochondrial protein AtMg00710 | 8.6e-10 | 38.55 | Show/hide |
Query: LNRIIMERVRCLLSNAILEEKFWAKVVVYAMYTLKKSPHISLGFLTPKEKWSKHRPNLNDLKVFGCVGYVHQNQGKLKARATK
+NR I+E+VR +L L + F A A++ + K P ++ F P E W + P + L+ FGCV Y+H ++GKLK RA K
Subjt: LNRIIMERVRCLLSNAILEEKFWAKVVVYAMYTLKKSPHISLGFLTPKEKWSKHRPNLNDLKVFGCVGYVHQNQGKLKARATK
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.7e-13 | 30.92 | Show/hide |
Query: GEFFNV--FYMENGITRHKAVRYTPQQNRVSERLNRIIMERVRCLLSNAILEEKFWAKVVVYAMYTLKKSPHISLGFLTPKEKWSKHRPNLNDLKVFGCV
GEF + ++ ++GI+ + +TP+ N +SER +R I+E LLS+A + + +W A+Y + + P L +P +K PN + L+VFGC
Subjt: GEFFNV--FYMENGITRHKAVRYTPQQNRVSERLNRIIMERVRCLLSNAILEEKFWAKVVVYAMYTLKKSPHISLGFLTPKEKWSKHRPNLNDLKVFGCV
Query: GYV---HQNQGKLKARATKCMFVGFTKWVKGFKMWHPTDKKFIISRDVHFKE
Y NQ KL ++ +C+F+G++ + H + ISR V F E
Subjt: GYV---HQNQGKLKARATKCMFVGFTKWVKGFKMWHPTDKKFIISRDVHFKE
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.4e-12 | 29.14 | Show/hide |
Query: MIEKQTDKEIKYLKTNNSLEFRGEFFNVFYMENGITRHKAVRYTPQQNRVSERLNRIIMERVRCLLSNAILEEKFWAKVVVYAMYTLKKSPHISLGFLTP
++E + I L ++N EF + ++GI+ + +TP+ N +SER +R I+E LLS+A + + +W A+Y + + P L +P
Subjt: MIEKQTDKEIKYLKTNNSLEFRGEFFNVFYMENGITRHKAVRYTPQQNRVSERLNRIIMERVRCLLSNAILEEKFWAKVVVYAMYTLKKSPHISLGFLTP
Query: KEKWSKHRPNLNDLKVFGCVGYV---HQNQGKLKARATKCMFVGFTKWVKGFKMWHPTDKKFIISRDVHFKEIRC
+K PN LKVFGC Y N+ KL+ ++ +C F+G++ + H + SR V F E RC
Subjt: KEKWSKHRPNLNDLKVFGCVGYV---HQNQGKLKARATKCMFVGFTKWVKGFKMWHPTDKKFIISRDVHFKEIRC
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