; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc07g0190861 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc07g0190861
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag-pol polyprotein
Genome locationCMiso1.1chr07:10223128..10223943
RNA-Seq ExpressionCmc07g0190861
SyntenyCmc07g0190861
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035157.1 gag-pol polyprotein [Cucumis melo var. makuwa]8.4e-10478.29Show/hide
Query:  MPSAHVKKNHLASCMIGDPSAGMQTRRKDKIDYLKMVADLCYICTIEPSTVD-SALKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWIFKNKT
        +PSAHVKKNH AS +IGDPSAGMQTRRKDKIDYLKMVADLCYI TIE STVD SALKDEYWLNAMQEELLQFRRNNVW LV KP GVNVIGTKWIFKNKT
Subjt:  MPSAHVKKNHLASCMIGDPSAGMQTRRKDKIDYLKMVADLCYICTIEPSTVD-SALKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWIFKNKT

Query:  DETGCATKNKARLVAQGYTQVEG--------------------------------MDVKSVFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQ
        DE GC TKNKARLVAQGYTQVEG                                MDVKS FLNGYLNEEVYVAQPKGFVD EHPKHVYKLNKALYGLKQ
Subjt:  DETGCATKNKARLVAQGYTQVEG--------------------------------MDVKSVFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQ

Query:  ALRAWYDRLTVYLRGRGYSRGEIDKTLFIHKKSDQLLVALIYVDDIIFGGFSQDLVNN
        A  AWYDRLTVYLRGRGYSRGEIDKTLFI  KSDQLLV  IYVDDIIFGGF Q L  N
Subjt:  ALRAWYDRLTVYLRGRGYSRGEIDKTLFIHKKSDQLLVALIYVDDIIFGGFSQDLVNN

KAA0053468.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.1e-10781.22Show/hide
Query:  MPSAHVKKNHLASCMIGDPSAGMQTRRKDKIDYLKMVADLCYICTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWIFKNKTD
        +PSAHVKKNH AS +IGDPSAGMQT+RK+KIDY+KMVADLCY  TIEPSTVDSA KDEYWLNAMQE+LLQFRR+NVWTLVSKPEGV VI TKW+FKNKTD
Subjt:  MPSAHVKKNHLASCMIGDPSAGMQTRRKDKIDYLKMVADLCYICTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWIFKNKTD

Query:  ETGCATKNKARLVAQGYTQVEGMDVKSVFLNGYLNE------EVYVAQPKGFVDSEHPKHVYKLNKALYGLKQALRAWYDRLTVYLRGRGYSRGEIDKTL
        E G  TKNKARLVAQGYTQVEG+D    F      E      EVYVAQP  FVDSEHPKHVY+LNKALY LKQALRAWY+RLTVYLRG+GYSRGEIDKTL
Subjt:  ETGCATKNKARLVAQGYTQVEGMDVKSVFLNGYLNE------EVYVAQPKGFVDSEHPKHVYKLNKALYGLKQALRAWYDRLTVYLRGRGYSRGEIDKTL

Query:  FIHKKSDQLLVALIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMV
        FIH+KSDQLL+A +YVDDIIFGGFS DLVNNFINIMQSEFEMSMV
Subjt:  FIHKKSDQLLVALIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMV

KAA0066164.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.7e-10976.58Show/hide
Query:  SAHVKKNHLASCMIGDPSAGMQTRRKDKIDYLKMVADLCYICTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWIFKNKTDET
        SAHVKKNH AS +IGDPS GMQTRRK+KIDY+KMVADLCYI T+EPSTVDSAL+DEYWLNAMQEELLQFR+NNVWTLVSKPEGVNVIGTKW+FKNKTDE 
Subjt:  SAHVKKNHLASCMIGDPSAGMQTRRKDKIDYLKMVADLCYICTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWIFKNKTDET

Query:  GCATKNKARLVAQGYTQVEG--------------------------------MDVKSVFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQALR
        GC TKNKA+LVAQGYTQVEG                                MDVKS FL+GYLNEEVYVAQPKGFVDSEHPKH+YKLNKALYGLKQA R
Subjt:  GCATKNKARLVAQGYTQVEG--------------------------------MDVKSVFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQALR

Query:  AWYDRLTVYLRGRGYSRGEIDKTLFIHKKSDQLLVALIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMV
        AWYD+LTVYLRG+GYSRGEIDKTLFI +KSDQLLVA IYVDDIIF GF  DLVNNFI     EFEMSMV
Subjt:  AWYDRLTVYLRGRGYSRGEIDKTLFIHKKSDQLLVALIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMV

TYJ98791.1 gag-pol polyprotein [Cucumis melo var. makuwa]7.1e-11177.99Show/hide
Query:  AHVKKNHLASCMIGDPSAGMQTRRKDKIDYLKMVADLCYICTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWIFKNKTDETG
        AHVKKNH AS +IGDPSAGMQTRRK+KIDY+KMVADLCYI T EPSTVD +L+DEY LNAMQEELLQF+RNNVWTLV KPEGVNVIGTKW+FKNKTDE G
Subjt:  AHVKKNHLASCMIGDPSAGMQTRRKDKIDYLKMVADLCYICTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWIFKNKTDETG

Query:  CATKNKARLVAQGYTQVEG--------------------------------MDVKSVFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQALRA
        C TKNKARLVAQGYTQVEG                                MDVKS FLNGYLNEEVYVAQPK FVDSEH KHVYKLNKALYGLKQA RA
Subjt:  CATKNKARLVAQGYTQVEG--------------------------------MDVKSVFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQALRA

Query:  WYDRLTVYLRGRGYSRGEIDKTLFIHKKSDQLLVALIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMV
        WYDRLTVYLRG+GYSRGEIDKTLFIH+KSDQLLVA IYVDDIIFGGF Q LVNNFI +MQSEFEMSMV
Subjt:  WYDRLTVYLRGRGYSRGEIDKTLFIHKKSDQLLVALIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMV

TYK19884.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.8e-10681.48Show/hide
Query:  SAHVKKNHLASCMIGDPSAGMQTRRKDKIDYLKMVADLCYICTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWIFKNKTDET
        SAHVKKNH AS +IGDPSAGMQT+RK+KIDY+KMVADLCY  TIEPSTVDSA KDEYWLNAMQE+LLQFRR+NVWTLVSKPEGV VI TKW+FKNKTDE 
Subjt:  SAHVKKNHLASCMIGDPSAGMQTRRKDKIDYLKMVADLCYICTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWIFKNKTDET

Query:  GCATKNKARLVAQGYTQVEGMDVKSVFLNGYLNE------EVYVAQPKGFVDSEHPKHVYKLNKALYGLKQALRAWYDRLTVYLRGRGYSRGEIDKTLFI
        G  TKNKARLVAQGYTQVEG+D    F      E      EVYVAQP  FVDSEHPKHVY+LNKALY LKQALRAWY+RLTVYLRG+GYSRGEIDKTLFI
Subjt:  GCATKNKARLVAQGYTQVEGMDVKSVFLNGYLNE------EVYVAQPKGFVDSEHPKHVYKLNKALYGLKQALRAWYDRLTVYLRGRGYSRGEIDKTLFI

Query:  HKKSDQLLVALIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMV
        H+KSDQLL+A +YVDDIIFGGFS DLVNNFINIMQSEFEMSMV
Subjt:  HKKSDQLLVALIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMV

TrEMBL top hitse value%identityAlignment
A0A5A7T0Q0 Gag-pol polyprotein4.0e-10478.29Show/hide
Query:  MPSAHVKKNHLASCMIGDPSAGMQTRRKDKIDYLKMVADLCYICTIEPSTVD-SALKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWIFKNKT
        +PSAHVKKNH AS +IGDPSAGMQTRRKDKIDYLKMVADLCYI TIE STVD SALKDEYWLNAMQEELLQFRRNNVW LV KP GVNVIGTKWIFKNKT
Subjt:  MPSAHVKKNHLASCMIGDPSAGMQTRRKDKIDYLKMVADLCYICTIEPSTVD-SALKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWIFKNKT

Query:  DETGCATKNKARLVAQGYTQVEG--------------------------------MDVKSVFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQ
        DE GC TKNKARLVAQGYTQVEG                                MDVKS FLNGYLNEEVYVAQPKGFVD EHPKHVYKLNKALYGLKQ
Subjt:  DETGCATKNKARLVAQGYTQVEG--------------------------------MDVKSVFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQ

Query:  ALRAWYDRLTVYLRGRGYSRGEIDKTLFIHKKSDQLLVALIYVDDIIFGGFSQDLVNN
        A  AWYDRLTVYLRGRGYSRGEIDKTLFI  KSDQLLV  IYVDDIIFGGF Q L  N
Subjt:  ALRAWYDRLTVYLRGRGYSRGEIDKTLFIHKKSDQLLVALIYVDDIIFGGFSQDLVNN

A0A5A7UEJ0 Gag-pol polyprotein1.0e-10781.22Show/hide
Query:  MPSAHVKKNHLASCMIGDPSAGMQTRRKDKIDYLKMVADLCYICTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWIFKNKTD
        +PSAHVKKNH AS +IGDPSAGMQT+RK+KIDY+KMVADLCY  TIEPSTVDSA KDEYWLNAMQE+LLQFRR+NVWTLVSKPEGV VI TKW+FKNKTD
Subjt:  MPSAHVKKNHLASCMIGDPSAGMQTRRKDKIDYLKMVADLCYICTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWIFKNKTD

Query:  ETGCATKNKARLVAQGYTQVEGMDVKSVFLNGYLNE------EVYVAQPKGFVDSEHPKHVYKLNKALYGLKQALRAWYDRLTVYLRGRGYSRGEIDKTL
        E G  TKNKARLVAQGYTQVEG+D    F      E      EVYVAQP  FVDSEHPKHVY+LNKALY LKQALRAWY+RLTVYLRG+GYSRGEIDKTL
Subjt:  ETGCATKNKARLVAQGYTQVEGMDVKSVFLNGYLNE------EVYVAQPKGFVDSEHPKHVYKLNKALYGLKQALRAWYDRLTVYLRGRGYSRGEIDKTL

Query:  FIHKKSDQLLVALIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMV
        FIH+KSDQLL+A +YVDDIIFGGFS DLVNNFINIMQSEFEMSMV
Subjt:  FIHKKSDQLLVALIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMV

A0A5D3BJA9 Gag-pol polyprotein3.4e-11177.99Show/hide
Query:  AHVKKNHLASCMIGDPSAGMQTRRKDKIDYLKMVADLCYICTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWIFKNKTDETG
        AHVKKNH AS +IGDPSAGMQTRRK+KIDY+KMVADLCYI T EPSTVD +L+DEY LNAMQEELLQF+RNNVWTLV KPEGVNVIGTKW+FKNKTDE G
Subjt:  AHVKKNHLASCMIGDPSAGMQTRRKDKIDYLKMVADLCYICTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWIFKNKTDETG

Query:  CATKNKARLVAQGYTQVEG--------------------------------MDVKSVFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQALRA
        C TKNKARLVAQGYTQVEG                                MDVKS FLNGYLNEEVYVAQPK FVDSEH KHVYKLNKALYGLKQA RA
Subjt:  CATKNKARLVAQGYTQVEG--------------------------------MDVKSVFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQALRA

Query:  WYDRLTVYLRGRGYSRGEIDKTLFIHKKSDQLLVALIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMV
        WYDRLTVYLRG+GYSRGEIDKTLFIH+KSDQLLVA IYVDDIIFGGF Q LVNNFI +MQSEFEMSMV
Subjt:  WYDRLTVYLRGRGYSRGEIDKTLFIHKKSDQLLVALIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMV

A0A5D3CXU0 Gag-pol polyprotein8.4e-11076.58Show/hide
Query:  SAHVKKNHLASCMIGDPSAGMQTRRKDKIDYLKMVADLCYICTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWIFKNKTDET
        SAHVKKNH AS +IGDPS GMQTRRK+KIDY+KMVADLCYI T+EPSTVDSAL+DEYWLNAMQEELLQFR+NNVWTLVSKPEGVNVIGTKW+FKNKTDE 
Subjt:  SAHVKKNHLASCMIGDPSAGMQTRRKDKIDYLKMVADLCYICTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWIFKNKTDET

Query:  GCATKNKARLVAQGYTQVEG--------------------------------MDVKSVFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQALR
        GC TKNKA+LVAQGYTQVEG                                MDVKS FL+GYLNEEVYVAQPKGFVDSEHPKH+YKLNKALYGLKQA R
Subjt:  GCATKNKARLVAQGYTQVEG--------------------------------MDVKSVFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQALR

Query:  AWYDRLTVYLRGRGYSRGEIDKTLFIHKKSDQLLVALIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMV
        AWYD+LTVYLRG+GYSRGEIDKTLFI +KSDQLLVA IYVDDIIF GF  DLVNNFI     EFEMSMV
Subjt:  AWYDRLTVYLRGRGYSRGEIDKTLFIHKKSDQLLVALIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMV

A0A5D3D8L4 Gag-pol polyprotein8.7e-10781.48Show/hide
Query:  SAHVKKNHLASCMIGDPSAGMQTRRKDKIDYLKMVADLCYICTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWIFKNKTDET
        SAHVKKNH AS +IGDPSAGMQT+RK+KIDY+KMVADLCY  TIEPSTVDSA KDEYWLNAMQE+LLQFRR+NVWTLVSKPEGV VI TKW+FKNKTDE 
Subjt:  SAHVKKNHLASCMIGDPSAGMQTRRKDKIDYLKMVADLCYICTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWIFKNKTDET

Query:  GCATKNKARLVAQGYTQVEGMDVKSVFLNGYLNE------EVYVAQPKGFVDSEHPKHVYKLNKALYGLKQALRAWYDRLTVYLRGRGYSRGEIDKTLFI
        G  TKNKARLVAQGYTQVEG+D    F      E      EVYVAQP  FVDSEHPKHVY+LNKALY LKQALRAWY+RLTVYLRG+GYSRGEIDKTLFI
Subjt:  GCATKNKARLVAQGYTQVEGMDVKSVFLNGYLNE------EVYVAQPKGFVDSEHPKHVYKLNKALYGLKQALRAWYDRLTVYLRGRGYSRGEIDKTLFI

Query:  HKKSDQLLVALIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMV
        H+KSDQLL+A +YVDDIIFGGFS DLVNNFINIMQSEFEMSMV
Subjt:  HKKSDQLLVALIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMV

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.9e-2632.55Show/hide
Query:  WLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWIFKNKTDETGCATKNKARLVAQGYTQ--------------------------------VEGMDVKS
        W  A+  EL   + NN WT+  +PE  N++ ++W+F  K +E G   + KARLVA+G+TQ                                V  MDVK+
Subjt:  WLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWIFKNKTDETGCATKNKARLVAQGYTQ--------------------------------VEGMDVKS

Query:  VFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQALRAWYDRLTVYLRGRGYSRGEIDKTLFIHKKS--DQLLVALIYVDDIIFGGFSQDLVNN
         FLNG L EE+Y+  P+G   S +  +V KLNKA+YGLKQA R W++     L+   +    +D+ ++I  K   ++ +  L+YVDD++        +NN
Subjt:  VFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQALRAWYDRLTVYLRGRGYSRGEIDKTLFIHKKS--DQLLVALIYVDDIIFGGFSQDLVNN

Query:  FINIMQSEFEMS
        F   +  +F M+
Subjt:  FINIMQSEFEMS

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-943.1e-2429.2Show/hide
Query:  MQTRRKDKIDYLKMVADLCYICTIEPSTVDSAL---KDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWIFKNKTDETGCATKNKARLVAQGYTQ
        +++RR    +Y+ +  D       EP ++   L   +    + AMQEE+   ++N  + LV  P+G   +  KW+FK K D      + KARLV +G+ Q
Subjt:  MQTRRKDKIDYLKMVADLCYICTIEPSTVDSAL---KDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWIFKNKTDETGCATKNKARLVAQGYTQ

Query:  --------------------------------VEGMDVKSVFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQALRAWYDRLTVYLRGRGYSR
                                        VE +DVK+ FL+G L EE+Y+ QP+GF  +     V KLNK+LYGLKQA R WY +   +++ + Y +
Subjt:  --------------------------------VEGMDVKSVFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQALRAWYDRLTVYLRGRGYSR

Query:  GEIDKTLFIHKKSD-QLLVALIYVDDIIFGGFSQDLVNNFINIMQSEFEM
           D  ++  + S+   ++ L+YVDD++  G  + L+      +   F+M
Subjt:  GEIDKTLFIHKKSD-QLLVALIYVDDIIFGGFSQDLVNNFINIMQSEFEM

P92520 Uncharacterized mitochondrial protein AtMg008207.5e-1545.63Show/hide
Query:  MQTRRKDKIDYLKMVADLCYICTI--EPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWIFKNKTDETGCATKNKARLVAQGYTQV
        M TR K  I+ L     L    TI  EP +V  ALKD  W  AMQEEL    RN  W LV  P   N++G KW+FK K    G   + KARLVA+G+ Q 
Subjt:  MQTRRKDKIDYLKMVADLCYICTI--EPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWIFKNKTDETGCATKNKARLVAQGYTQV

Query:  EGM
        EG+
Subjt:  EGM

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE17.3e-3436.77Show/hide
Query:  EPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKPEG-VNVIGTKWIFKNKTDETGCATKNKARLVAQGYTQVEG-----------------------
        EP T   ALKDE W NAM  E+     N+ W LV  P   V ++G +WIF  K +  G   + KARLVA+GY Q  G                       
Subjt:  EPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKPEG-VNVIGTKWIFKNKTDETGCATKNKARLVAQGYTQVEG-----------------------

Query:  ---------MDVKSVFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQALRAWYDRLTVYLRGRGYSRGEIDKTLFIHKKSDQLLVALIYVDDI
                 +DV + FL G L ++VY++QP GF+D + P +V KL KALYGLKQA RAWY  L  YL   G+     D +LF+ ++   ++  L+YVDDI
Subjt:  ---------MDVKSVFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQALRAWYDRLTVYLRGRGYSRGEIDKTLFIHKKSDQLLVALIYVDDI

Query:  IFGGFSQDLVNNFINIMQSEFEM
        +  G    L++N ++ +   F +
Subjt:  IFGGFSQDLVNNFINIMQSEFEM

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE23.0e-3233.86Show/hide
Query:  MQTRRKD-------KIDYLKMVADLCYICTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLV-SKPEGVNVIGTKWIFKNKTDETGCATKNKARLVA
        M TR KD       K  Y   +A        EP T   A+KD+ W  AM  E+     N+ W LV   P  V ++G +WIF  K +  G   + KARLVA
Subjt:  MQTRRKD-------KIDYLKMVADLCYICTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLV-SKPEGVNVIGTKWIFKNKTDETGCATKNKARLVA

Query:  QGYTQVEG--------------------------------MDVKSVFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQALRAWYDRLTVYLRG
        +GY Q  G                                +DV + FL G L +EVY++QP GFVD + P +V +L KA+YGLKQA RAWY  L  YL  
Subjt:  QGYTQVEG--------------------------------MDVKSVFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQALRAWYDRLTVYLRG

Query:  RGYSRGEIDKTLFIHKKSDQLLVALIYVDDIIFGGFSQDLVNNFINIMQSEFEM
         G+     D +LF+ ++   ++  L+YVDDI+  G    L+ + ++ +   F +
Subjt:  RGYSRGEIDKTLFIHKKSDQLLVALIYVDDIIFGGFSQDLVNNFINIMQSEFEM

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 82.3e-2731.76Show/hide
Query:  LCYICTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWIFKNKTDETGCATKNKARLVAQGYTQVEG-----------------
        +C     EPST + A +   W  AM +E+      + W + + P     IG KW++K K +  G   + KARLVA+GYTQ EG                 
Subjt:  LCYICTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWIFKNKTDETGCATKNKARLVAQGYTQVEG-----------------

Query:  ---------------MDVKSVFLNGYLNEEVYVAQPKGFV----DSEHPKHVYKLNKALYGLKQALRAWYDRLTVYLRGRGYSRGEIDKTLFIHKKSDQL
                       +D+ + FLNG L+EE+Y+  P G+     DS  P  V  L K++YGLKQA R W+ + +V L G G+ +   D T F+   +   
Subjt:  ---------------MDVKSVFLNGYLNEEVYVAQPKGFV----DSEHPKHVYKLNKALYGLKQALRAWYDRLTVYLRGRGYSRGEIDKTLFIHKKSDQL

Query:  LVALIYVDDIIFGGFSQDLVNNFINIMQSEFEM
        L  L+YVDDII    +   V+   + ++S F++
Subjt:  LVALIYVDDIIFGGFSQDLVNNFINIMQSEFEM

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)5.4e-1645.63Show/hide
Query:  MQTRRKDKIDYLKMVADLCYICTI--EPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWIFKNKTDETGCATKNKARLVAQGYTQV
        M TR K  I+ L     L    TI  EP +V  ALKD  W  AMQEEL    RN  W LV  P   N++G KW+FK K    G   + KARLVA+G+ Q 
Subjt:  MQTRRKDKIDYLKMVADLCYICTI--EPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWIFKNKTDETGCATKNKARLVAQGYTQV

Query:  EGM
        EG+
Subjt:  EGM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTCAGCTCATGTAAAGAAAAATCATCTAGCAAGCTGTATGATAGGTGATCCATCAGCTGGGATGCAGACCAGAAGGAAAGATAAGATTGACTATTTGAAG
ATGGTTGCTGATTTGTGTTATATTTGCACCATTGAACCTTCGACTGTTGACTCTGCTCTCAAGGATGAGTATTGGTTAAATGCAATGCAAGAGGAGCTACTGCAA
TTTAGACGAAATAATGTCTGGACGTTAGTCTCAAAGCCAGAAGGTGTAAACGTTATTGGCACCAAATGGATATTTAAAAATAAGACTGATGAAACTGGATGTGCG
ACGAAAAATAAAGCCAGATTAGTAGCTCAAGGGTATACTCAAGTTGAAGGTATGGATGTAAAGAGTGTCTTCTTAAATGGGTACTTGAATGAGGAGGTTTATGTT
GCTCAACCAAAAGGTTTTGTAGATTCCGAGCACCCAAAGCATGTGTATAAGCTCAACAAAGCCTTATATGGACTAAAGCAAGCTCTGAGAGCTTGGTATGACCGG
CTAACTGTATACTTGAGAGGTAGAGGATATTCCAGAGGAGAAATTGACAAGACCTTGTTCATACACAAGAAATCTGACCAATTGTTGGTGGCTCTAATTTATGTT
GATGACATCATTTTTGGAGGATTTTCTCAGGATCTAGTAAATAACTTCATTAATATTATGCAGTCAGAATTCGAAATGAGCATGGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTTCAGCTCATGTAAAGAAAAATCATCTAGCAAGCTGTATGATAGGTGATCCATCAGCTGGGATGCAGACCAGAAGGAAAGATAAGATTGACTATTTGAAG
ATGGTTGCTGATTTGTGTTATATTTGCACCATTGAACCTTCGACTGTTGACTCTGCTCTCAAGGATGAGTATTGGTTAAATGCAATGCAAGAGGAGCTACTGCAA
TTTAGACGAAATAATGTCTGGACGTTAGTCTCAAAGCCAGAAGGTGTAAACGTTATTGGCACCAAATGGATATTTAAAAATAAGACTGATGAAACTGGATGTGCG
ACGAAAAATAAAGCCAGATTAGTAGCTCAAGGGTATACTCAAGTTGAAGGTATGGATGTAAAGAGTGTCTTCTTAAATGGGTACTTGAATGAGGAGGTTTATGTT
GCTCAACCAAAAGGTTTTGTAGATTCCGAGCACCCAAAGCATGTGTATAAGCTCAACAAAGCCTTATATGGACTAAAGCAAGCTCTGAGAGCTTGGTATGACCGG
CTAACTGTATACTTGAGAGGTAGAGGATATTCCAGAGGAGAAATTGACAAGACCTTGTTCATACACAAGAAATCTGACCAATTGTTGGTGGCTCTAATTTATGTT
GATGACATCATTTTTGGAGGATTTTCTCAGGATCTAGTAAATAACTTCATTAATATTATGCAGTCAGAATTCGAAATGAGCATGGTTTGA
Protein sequenceShow/hide protein sequence
MPSAHVKKNHLASCMIGDPSAGMQTRRKDKIDYLKMVADLCYICTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWIFKNKTDETGCA
TKNKARLVAQGYTQVEGMDVKSVFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQALRAWYDRLTVYLRGRGYSRGEIDKTLFIHKKSDQLLVALIYV
DDIIFGGFSQDLVNNFINIMQSEFEMSMV