| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0026271.1 pol protein [Cucumis melo var. makuwa] | 3.8e-232 | 97.58 | Show/hide |
Query: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
MAPAELKELKVQLQ+LLDKGFIR SVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
Subjt: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
Query: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEVEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDI IYSKTE EHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEVEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVYPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKGL
VSV PAKIEAVTGWTRPSTVSEV SFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVT PVLTVPDGSGSFVIYSDASKKGL
Subjt: VSVYPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKGL
Query: GCVLMQQGKVVAYASRLLKSHEQNYSTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
GCVLMQQGKVVAYASR LKSHEQNY THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt: GCVLMQQGKVVAYASRLLKSHEQNYSTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Query: LSRKVSHSAALITR
LSRKVSHSAALITR
Subjt: LSRKVSHSAALITR
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| KAA0037244.1 reverse transcriptase [Cucumis melo var. makuwa] | 7.7e-233 | 98.07 | Show/hide |
Query: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPK
Subjt: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
Query: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEVEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDI IYSKTEVEHEEHLRMVLQTLRDNKLYAKF KCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEVEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVYPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKGL
VSV PAKIEAVTGWTRPSTVSEV SFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVT PVLTVPDGSGSFVIYSDASKKGL
Subjt: VSVYPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKGL
Query: GCVLMQQGKVVAYASRLLKSHEQNYSTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
GCVLMQQGKVVAYASR LKSHEQNY THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt: GCVLMQQGKVVAYASRLLKSHEQNYSTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Query: LSRKVSHSAALITR
LSRKVSHSAALITR
Subjt: LSRKVSHSAALITR
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| KAA0048687.1 pol protein [Cucumis melo var. makuwa] | 4.5e-233 | 98.07 | Show/hide |
Query: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPK
Subjt: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
Query: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEVEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDI IYSKTE EHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEVEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVYPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKGL
VSV PAKIEAVTGWTRPSTVSEV SFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVT PVLTVPDGSGSFVIYSDASKKGL
Subjt: VSVYPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKGL
Query: GCVLMQQGKVVAYASRLLKSHEQNYSTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
GCVLMQQGKVVAYASR LKSHEQNY THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt: GCVLMQQGKVVAYASRLLKSHEQNYSTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Query: LSRKVSHSAALITR
LSRKVSHSAALITR
Subjt: LSRKVSHSAALITR
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| KAA0054785.1 pol protein [Cucumis melo var. makuwa] | 3.1e-250 | 100 | Show/hide |
Query: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
Subjt: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
Query: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEVEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEVEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEVEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVYPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKGL
VSVYPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKGL
Subjt: VSVYPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKGL
Query: GCVLMQQGKVVAYASRLLKSHEQNYSTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
GCVLMQQGKVVAYASRLLKSHEQNYSTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt: GCVLMQQGKVVAYASRLLKSHEQNYSTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Query: LSRKVSHSAALITRHVTPPPGLPATLDRKMA
LSRKVSHSAALITRHVTPPPGLPATLDRKMA
Subjt: LSRKVSHSAALITRHVTPPPGLPATLDRKMA
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| TYK01613.1 pol protein [Cucumis melo var. makuwa] | 2.2e-232 | 97.83 | Show/hide |
Query: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPK
Subjt: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
Query: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEVEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDI IYSKTE EHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEVEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVYPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKGL
VSV PAKIEAVTGWTRPSTVSEV SFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVT PVLTVPDGSGSFVIYSDASKKGL
Subjt: VSVYPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKGL
Query: GCVLMQQGKVVAYASRLLKSHEQNYSTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
GCVLMQQGKVVAYASR LKSHEQNY THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt: GCVLMQQGKVVAYASRLLKSHEQNYSTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Query: LSRKVSHSAALITR
LSRKVSHSAALITR
Subjt: LSRKVSHSAALITR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T190 Reverse transcriptase | 3.7e-233 | 98.07 | Show/hide |
Query: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPK
Subjt: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
Query: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEVEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDI IYSKTEVEHEEHLRMVLQTLRDNKLYAKF KCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEVEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVYPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKGL
VSV PAKIEAVTGWTRPSTVSEV SFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVT PVLTVPDGSGSFVIYSDASKKGL
Subjt: VSVYPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKGL
Query: GCVLMQQGKVVAYASRLLKSHEQNYSTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
GCVLMQQGKVVAYASR LKSHEQNY THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt: GCVLMQQGKVVAYASRLLKSHEQNYSTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Query: LSRKVSHSAALITR
LSRKVSHSAALITR
Subjt: LSRKVSHSAALITR
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| A0A5A7TB42 Reverse transcriptase | 1.8e-232 | 97.11 | Show/hide |
Query: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
Subjt: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
Query: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEVEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVF+EFLDTFVIVFIDDI IYSK E EHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEVEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVYPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKGL
VSV PAKIEAVTGWTRPSTVSEV SFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVT PVLTVPDGSGSFVIYSDASKKGL
Subjt: VSVYPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKGL
Query: GCVLMQQGKVVAYASRLLKSHEQNYSTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
G VLMQQGKVVAYASR LKSHEQNY THDLELAAV+FALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt: GCVLMQQGKVVAYASRLLKSHEQNYSTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Query: LSRKVSHSAALITRH
LSRKVSHSAALITRH
Subjt: LSRKVSHSAALITRH
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| A0A5A7U330 Reverse transcriptase | 2.2e-233 | 98.07 | Show/hide |
Query: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPK
Subjt: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
Query: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEVEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDI IYSKTE EHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEVEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVYPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKGL
VSV PAKIEAVTGWTRPSTVSEV SFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVT PVLTVPDGSGSFVIYSDASKKGL
Subjt: VSVYPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKGL
Query: GCVLMQQGKVVAYASRLLKSHEQNYSTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
GCVLMQQGKVVAYASR LKSHEQNY THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt: GCVLMQQGKVVAYASRLLKSHEQNYSTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Query: LSRKVSHSAALITR
LSRKVSHSAALITR
Subjt: LSRKVSHSAALITR
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| A0A5A7UM74 Pol protein | 1.5e-250 | 100 | Show/hide |
Query: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
Subjt: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
Query: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEVEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEVEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEVEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVYPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKGL
VSVYPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKGL
Subjt: VSVYPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKGL
Query: GCVLMQQGKVVAYASRLLKSHEQNYSTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
GCVLMQQGKVVAYASRLLKSHEQNYSTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt: GCVLMQQGKVVAYASRLLKSHEQNYSTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Query: LSRKVSHSAALITRHVTPPPGLPATLDRKMA
LSRKVSHSAALITRHVTPPPGLPATLDRKMA
Subjt: LSRKVSHSAALITRHVTPPPGLPATLDRKMA
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| A0A5D3BPI1 Reverse transcriptase | 1.1e-232 | 97.83 | Show/hide |
Query: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPK
Subjt: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
Query: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEVEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDI IYSKTE EHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEVEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVYPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKGL
VSV PAKIEAVTGWTRPSTVSEV SFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVT PVLTVPDGSGSFVIYSDASKKGL
Subjt: VSVYPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKGL
Query: GCVLMQQGKVVAYASRLLKSHEQNYSTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
GCVLMQQGKVVAYASR LKSHEQNY THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt: GCVLMQQGKVVAYASRLLKSHEQNYSTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Query: LSRKVSHSAALITR
LSRKVSHSAALITR
Subjt: LSRKVSHSAALITR
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| SwissProt top hits | e value | %identity | Alignment |
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| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 2.1e-87 | 40.94 | Show/hide |
Query: KELKVQLQELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKT
+E++ Q+Q++L++G IR S SP+ +P+ V KK+D S R+ IDYR+LN++TV +R+P+P +D++ +L F+ IDL G+HQ+ + V KT
Subjt: KELKVQLQELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKT
Query: AFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEVEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGV
AF +++GHYE++ M FGL NAPA F MN + R L+ +V++DDI ++S + EH + L +V + L L + KCEF ++ +FLGHV++ G+
Subjt: AFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEVEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGV
Query: SVYPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDS-FQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKGL
P KIEA+ + P+ E+ +FLGL GYYR+F+ NF+ IA P+T+ +K + DS F+ LK + P+L VPD + F + +DAS L
Subjt: SVYPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDS-FQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKGL
Query: GCVLMQQGKVVAYASRLLKSHEQNYSTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
G VL Q G ++Y SR L HE NYST + EL A+V+A K +RHYL G +I +DH+ L + + K+ N + RW + ++D +I Y GK N VADA
Subjt: GCVLMQQGKVVAYASRLLKSHEQNYSTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Query: LSR
LSR
Subjt: LSR
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| P0CT34 Transposon Tf2-1 polyprotein | 4.6e-79 | 37.41 | Show/hide |
Query: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
+ P +++ + ++ + L G IR S + PV+FV KK+G++R+ +DY+ LNK N YPLP I+ L ++QG+T+F+K+DL+S YH +R++ GD K
Subjt: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
Query: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEVEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
AFR G +E++VM +G++ APA F +N + E ++ V+ ++DDI I+SK+E EH +H++ VLQ L++ L +KCEF QV F+G+ +S+ G
Subjt: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEVEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVYPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKGL
+ I+ V W +P E+ FLG Y R+F+ S++ PL L +K + W+ + +N+KQ LV+ PVL D S ++ +DAS +
Subjt: VSVYPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKGL
Query: GCVLMQQGK-----VVAYASRLLKSHEQNYSTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
G VL Q+ V Y S + + NYS D E+ A++ +LK WRHYL E +I TDH++L T + N R RW ++D++ EI Y P
Subjt: GCVLMQQGK-----VVAYASRLLKSHEQNYSTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
Query: GKANVVADALSRKVSHS
G AN +ADALSR V +
Subjt: GKANVVADALSRKVSHS
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| P0CT41 Transposon Tf2-12 polyprotein | 4.6e-79 | 37.41 | Show/hide |
Query: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
+ P +++ + ++ + L G IR S + PV+FV KK+G++R+ +DY+ LNK N YPLP I+ L ++QG+T+F+K+DL+S YH +R++ GD K
Subjt: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
Query: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEVEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
AFR G +E++VM +G++ APA F +N + E ++ V+ ++DDI I+SK+E EH +H++ VLQ L++ L +KCEF QV F+G+ +S+ G
Subjt: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEVEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVYPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKGL
+ I+ V W +P E+ FLG Y R+F+ S++ PL L +K + W+ + +N+KQ LV+ PVL D S ++ +DAS +
Subjt: VSVYPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKGL
Query: GCVLMQQGK-----VVAYASRLLKSHEQNYSTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
G VL Q+ V Y S + + NYS D E+ A++ +LK WRHYL E +I TDH++L T + N R RW ++D++ EI Y P
Subjt: GCVLMQQGK-----VVAYASRLLKSHEQNYSTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
Query: GKANVVADALSRKVSHS
G AN +ADALSR V +
Subjt: GKANVVADALSRKVSHS
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 5.1e-86 | 39.55 | Show/hide |
Query: ELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA
E++ Q+QE+L++G IR S SP+ +P V KK R+ IDYR+LN++T+ +RYP+P +D++ +L F+ IDL G+HQ+ + + + KTA
Subjt: ELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA
Query: FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEVEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVS
F ++ GHYE++ M FGL NAPA F MN + R L+ +V++DDI I+S + EH +++V L D L + KCEF K+ +FLGH+V+ G+
Subjt: FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEVEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVS
Query: VYPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSK-ACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKGLG
P K++A+ + P+ E+ +FLGL GYYR+F+ N++ IA P+T +K K ++F+ LK ++ P+L +PD FV+ +DAS LG
Subjt: VYPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSK-ACEDSFQNLKQKLVTTPVLTVPDGSGSFVIYSDASKKGLG
Query: CVLMQQGKVVAYASRLLKSHEQNYSTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADAL
VL Q G +++ SR L HE NYS + EL A+V+A K +RHYL G + I +DH+ L++ KE + RW + +Y +I Y GK N VADAL
Subjt: CVLMQQGKVVAYASRLLKSHEQNYSTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADAL
Query: SR
SR
Subjt: SR
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 1.7e-81 | 37.17 | Show/hide |
Query: ELKVQLQELLDKGFIRPSVSPWGAPVLFVKKK-----DGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA
E++ Q+ ELL G IRPS SP+ +P+ V KK + R+ +D++ LN VT+ + YP+P I+ L A F+ +DL SG+HQ+ +K+ D+PKTA
Subjt: ELKVQLQELLDKGFIRPSVSPWGAPVLFVKKK-----DGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA
Query: FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEVEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVS
F + G YEF+ + FGL NAPA+F +++ + RE + V+IDDI ++S+ H ++LR+VL +L L K F QV FLG++V+ G+
Subjt: FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIFIYSKTEVEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVS
Query: VYPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRRFVENFSRIATPLTQLTR-----------KGAPFVWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVI
P K+ A++ P++V E+ FLG+ YYR+F+++++++A PLT LTR P + SF +LK L ++ +L P + F +
Subjt: VYPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRRFVENFSRIATPLTQLTR-----------KGAPFVWSKACEDSFQNLKQKLVTTPVLTVPDGSGSFVI
Query: YSDASKKGLGCVLMQ----QGKVVAYASRLLKSHEQNYSTHDLELAAVVFALKIWRHYLYGE-KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCE
+DAS +G VL Q + + +AY SR L E+NY+T + E+ A++++L R YLYG I+++TDH+ L + + N + +RW +++Y+CE
Subjt: YSDASKKGLGCVLMQ----QGKVVAYASRLLKSHEQNYSTHDLELAAVVFALKIWRHYLYGE-KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCE
Query: ILYHPGKANVVADALSR
++Y PGK+NVVADALSR
Subjt: ILYHPGKANVVADALSR
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