| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0026271.1 pol protein [Cucumis melo var. makuwa] | 4.9e-176 | 96.57 | Show/hide |
Query: MAPAQLKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPK
MAPA+LKELKVQL++LLDKGFIR SVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL+SGYHQLRIKDGDVPK
Subjt: MAPAQLKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPK
Query: TTFRFRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAKHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
T FR RYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEA+HEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TTFRFRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAKHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGASFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGA FVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt: VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGASFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Query: GCVLMQQGKVVAYASHQLKSH
GCVLMQQGKVVAYAS QLKSH
Subjt: GCVLMQQGKVVAYASHQLKSH
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| KAA0047433.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 2.0e-177 | 97.2 | Show/hide |
Query: MAPAQLKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPK
MAPA+LKELKVQL+ELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL+SGYHQLRIKDGDVPK
Subjt: MAPAQLKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPK
Query: TTFRFRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAKHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
T FR RYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEA+HEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TTFRFRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAKHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGASFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGA FVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt: VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGASFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Query: GCVLMQQGKVVAYASHQLKSH
GCVLMQQGKVVAYAS QLKSH
Subjt: GCVLMQQGKVVAYASHQLKSH
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| KAA0048687.1 pol protein [Cucumis melo var. makuwa] | 5.8e-177 | 97.2 | Show/hide |
Query: MAPAQLKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPK
MAPA+LKELKVQL+ELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL+SGYHQLRIKD DVPK
Subjt: MAPAQLKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPK
Query: TTFRFRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAKHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
T FR RYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEA+HEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TTFRFRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAKHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGASFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGA FVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt: VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGASFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Query: GCVLMQQGKVVAYASHQLKSH
GCVLMQQGKVVAYAS QLKSH
Subjt: GCVLMQQGKVVAYASHQLKSH
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| KAA0051051.1 reverse transcriptase [Cucumis melo var. makuwa] | 5.8e-177 | 96.88 | Show/hide |
Query: MAPAQLKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPK
MAPA+LKELKVQL+ELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL+SGYHQLRIK+GDVPK
Subjt: MAPAQLKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPK
Query: TTFRFRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAKHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
T FR RYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEA+HEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TTFRFRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAKHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGASFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGA FVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt: VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGASFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Query: GCVLMQQGKVVAYASHQLKSH
GCVLMQQGKVVAYAS QLKSH
Subjt: GCVLMQQGKVVAYASHQLKSH
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| TYK01613.1 pol protein [Cucumis melo var. makuwa] | 2.9e-176 | 96.88 | Show/hide |
Query: MAPAQLKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPK
MAPA+LKELKVQL+ELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL+SGYHQLRIKD DVPK
Subjt: MAPAQLKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPK
Query: TTFRFRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAKHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
T FR RYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEA+HEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TTFRFRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAKHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGASFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGA FVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt: VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGASFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Query: GCVLMQQGKVVAYASHQLKSH
GCVLMQQGKVVAYAS QLKSH
Subjt: GCVLMQQGKVVAYASHQLKSH
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SPZ2 Pol protein | 2.4e-176 | 96.57 | Show/hide |
Query: MAPAQLKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPK
MAPA+LKELKVQL++LLDKGFIR SVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL+SGYHQLRIKDGDVPK
Subjt: MAPAQLKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPK
Query: TTFRFRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAKHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
T FR RYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEA+HEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TTFRFRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAKHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGASFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGA FVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt: VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGASFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Query: GCVLMQQGKVVAYASHQLKSH
GCVLMQQGKVVAYAS QLKSH
Subjt: GCVLMQQGKVVAYASHQLKSH
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| A0A5A7TV57 Ty3-gypsy retrotransposon protein | 9.7e-178 | 97.2 | Show/hide |
Query: MAPAQLKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPK
MAPA+LKELKVQL+ELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL+SGYHQLRIKDGDVPK
Subjt: MAPAQLKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPK
Query: TTFRFRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAKHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
T FR RYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEA+HEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TTFRFRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAKHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGASFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGA FVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt: VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGASFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Query: GCVLMQQGKVVAYASHQLKSH
GCVLMQQGKVVAYAS QLKSH
Subjt: GCVLMQQGKVVAYASHQLKSH
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| A0A5A7U330 Reverse transcriptase | 2.8e-177 | 97.2 | Show/hide |
Query: MAPAQLKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPK
MAPA+LKELKVQL+ELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL+SGYHQLRIKD DVPK
Subjt: MAPAQLKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPK
Query: TTFRFRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAKHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
T FR RYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEA+HEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TTFRFRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAKHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGASFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGA FVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt: VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGASFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Query: GCVLMQQGKVVAYASHQLKSH
GCVLMQQGKVVAYAS QLKSH
Subjt: GCVLMQQGKVVAYASHQLKSH
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| A0A5A7UC07 Reverse transcriptase | 2.8e-177 | 96.88 | Show/hide |
Query: MAPAQLKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPK
MAPA+LKELKVQL+ELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL+SGYHQLRIK+GDVPK
Subjt: MAPAQLKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPK
Query: TTFRFRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAKHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
T FR RYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEA+HEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TTFRFRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAKHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGASFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGA FVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt: VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGASFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Query: GCVLMQQGKVVAYASHQLKSH
GCVLMQQGKVVAYAS QLKSH
Subjt: GCVLMQQGKVVAYASHQLKSH
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| A0A5D3BPI1 Reverse transcriptase | 1.4e-176 | 96.88 | Show/hide |
Query: MAPAQLKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPK
MAPA+LKELKVQL+ELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL+SGYHQLRIKD DVPK
Subjt: MAPAQLKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPK
Query: TTFRFRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAKHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
T FR RYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEA+HEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TTFRFRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAKHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGASFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGA FVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt: VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGASFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Query: GCVLMQQGKVVAYASHQLKSH
GCVLMQQGKVVAYAS QLKSH
Subjt: GCVLMQQGKVVAYASHQLKSH
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| SwissProt top hits | e value | %identity | Alignment |
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| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 3.7e-65 | 38.63 | Show/hide |
Query: KELKVQLRELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKT
+E++ Q++++L++G IR S SP+ +P+ V KK+D S R+ IDYR+LN++TV +R+P+P +D++ +L F+ IDL G+HQ+ + V KT
Subjt: KELKVQLRELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKT
Query: TFRFRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAKHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGV
F ++GHYE++ M FGL NAPA F MN + R L+ +V++DDI+++S + +H + L +V + L L + KCEF ++ +FLGHV++ G+
Subjt: TFRFRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAKHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGV
Query: SVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGASFVWSKACEDS-FQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
+P KIEA+ + P+ E+++FLGL GYYR+F+ NF+ IA P+T+ +K + DS F+ LK + P+L VPD + F + +DAS L
Subjt: SVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGASFVWSKACEDS-FQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Query: GCVLMQQGKVVAYASHQLKSH
G VL Q G ++Y S L H
Subjt: GCVLMQQGKVVAYASHQLKSH
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| P0CT34 Transposon Tf2-1 polyprotein | 1.9e-61 | 37.13 | Show/hide |
Query: MAPAQLKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPK
+ P +++ + ++ + L G IR S + PV+FV KK+G++R+ +DY+ LNK N YPLP I+ L ++QG+T+F+K+DL+S YH +R++ GD K
Subjt: MAPAQLKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPK
Query: TTFRFRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAKHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
FR G +E++VM +G++ APA F +N + E ++ V+ ++DDILI+SK+E++H +H++ VLQ L++ L +KCEF QV F+G+ +S+ G
Subjt: TTFRFRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAKHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGASFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
+ I+ V W +P E+R FLG Y R+F+ S++ PL L +K + W+ + +N+KQ LV+ PVL D S ++ +DAS +
Subjt: VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGASFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Query: GCVLMQQ
G VL Q+
Subjt: GCVLMQQ
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| P0CT35 Transposon Tf2-2 polyprotein | 1.9e-61 | 37.13 | Show/hide |
Query: MAPAQLKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPK
+ P +++ + ++ + L G IR S + PV+FV KK+G++R+ +DY+ LNK N YPLP I+ L ++QG+T+F+K+DL+S YH +R++ GD K
Subjt: MAPAQLKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPK
Query: TTFRFRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAKHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
FR G +E++VM +G++ APA F +N + E ++ V+ ++DDILI+SK+E++H +H++ VLQ L++ L +KCEF QV F+G+ +S+ G
Subjt: TTFRFRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAKHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGASFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
+ I+ V W +P E+R FLG Y R+F+ S++ PL L +K + W+ + +N+KQ LV+ PVL D S ++ +DAS +
Subjt: VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGASFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Query: GCVLMQQ
G VL Q+
Subjt: GCVLMQQ
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| P0CT41 Transposon Tf2-12 polyprotein | 1.9e-61 | 37.13 | Show/hide |
Query: MAPAQLKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPK
+ P +++ + ++ + L G IR S + PV+FV KK+G++R+ +DY+ LNK N YPLP I+ L ++QG+T+F+K+DL+S YH +R++ GD K
Subjt: MAPAQLKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPK
Query: TTFRFRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAKHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
FR G +E++VM +G++ APA F +N + E ++ V+ ++DDILI+SK+E++H +H++ VLQ L++ L +KCEF QV F+G+ +S+ G
Subjt: TTFRFRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAKHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGASFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
+ I+ V W +P E+R FLG Y R+F+ S++ PL L +K + W+ + +N+KQ LV+ PVL D S ++ +DAS +
Subjt: VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGASFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Query: GCVLMQQ
G VL Q+
Subjt: GCVLMQQ
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 4.3e-66 | 37.73 | Show/hide |
Query: AQLKELKV--QLRELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDG
AQ E++V Q++E+L++G IR S SP+ +P V KK R+ IDYR+LN++T+ +RYP+P +D++ +L F+ IDL G+HQ+ + +
Subjt: AQLKELKV--QLRELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDG
Query: DVPKTTFRFRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAKHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVV
+ KT F + GHYE++ M FGL NAPA F MN + R L+ +V++DDI+I+S + +H +++V L D L + KCEF K+ +FLGH+V
Subjt: DVPKTTFRFRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAKHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVV
Query: SKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGASFVWSK-ACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDA
+ G+ +P K++A+ + P+ E+R+FLGL GYYR+F+ N++ IA P+T +K K ++F+ LK ++ P+L +PD FV+ +DA
Subjt: SKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGASFVWSK-ACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDA
Query: SKKGLGCVLMQQGKVVAYASHQLKSH
S LG VL Q G +++ S L H
Subjt: SKKGLGCVLMQQGKVVAYASHQLKSH
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