| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0037369.1 pol protein [Cucumis melo var. makuwa] | 2.2e-210 | 91.26 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSDYHQLRIRDSDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNRVFKDFLDSFV
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS YHQLRIRD DIPKTAFRSRYGHYEFVVMSFGLT AP VFMDLMNR+FKDFLDSFV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSDYHQLRIRDSDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNRVFKDFLDSFV
Query: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKF------------------HVVPSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFLR
IVFIDDILIYSKTEAEHEEHLHQVLETLRANK HVV SEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDF R
Subjt: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKF------------------HVVPSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFLR
Query: IANPLTQLTRKGTPFVWSPAYESSFQELKQKLVTAPVLTVPNGSGSFVIYSDASKKGLGCVLMQRGKVVAYASRQLKIHEQNYPTHDLELAAVVFAMKIW
IANPLTQLTRKG PFVWSPA ESSFQELKQKLVTAPVLTVP+GSG+FVIYSDASKKGLGCVLMQ+GKVVAYASRQLKIHEQNYPTHDLELAAVVFA+KIW
Subjt: IANPLTQLTRKGTPFVWSPAYESSFQELKQKLVTAPVLTVPNGSGSFVIYSDASKKGLGCVLMQRGKVVAYASRQLKIHEQNYPTHDLELAAVVFAMKIW
Query: RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCDILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTSQLAQLS
RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDC+ILYHPGKANVVADALSRKVAHSAALITKQTPLL+DFERAEIAVSVGEVT+QLAQLS
Subjt: RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCDILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTSQLAQLS
Query: VQPTLRQKIIVA
VQPTLRQKII A
Subjt: VQPTLRQKIIVA
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| KAA0046150.1 pol protein [Cucumis melo var. makuwa] | 2.7e-216 | 97.72 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSDYHQLRIRDSDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNRVFKDFLDSFV
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSDYHQLRIRDSDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNRVFKDFLDSFV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSDYHQLRIRDSDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNRVFKDFLDSFV
Query: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKFHVVPSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFLRIANPLTQLTRKGTPFVWS
IVFIDDILIYSKTEAEHEEHLHQV HVVPSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFLRIANPLTQLTRKGTPFVWS
Subjt: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKFHVVPSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFLRIANPLTQLTRKGTPFVWS
Query: PAYESSFQELKQKLVTAPVLTVPNGSGSFVIYSDASKKGLGCVLMQRGKVVAYASRQLKIHEQNYPTHDLELAAVVFAMKIWRHYLYGEKIQIYTDHKSL
PAYESSFQELKQKLVTAPVLTVPNGSGSFVIYSDASKKGLGCVLMQRGKVVAYASRQLKIHEQNYPTHDLELAAVVFAMKIWRHYLYGEKIQIYTDHKSL
Subjt: PAYESSFQELKQKLVTAPVLTVPNGSGSFVIYSDASKKGLGCVLMQRGKVVAYASRQLKIHEQNYPTHDLELAAVVFAMKIWRHYLYGEKIQIYTDHKSL
Query: KYFFTQKELNMRQRRWLELVKDYDCDILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQKIIVA
KYFFTQKELNMRQRRWLELVKDYDCDILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQKIIVA
Subjt: KYFFTQKELNMRQRRWLELVKDYDCDILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQKIIVA
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| KAA0060745.1 pol protein [Cucumis melo var. makuwa] | 7.6e-211 | 91.5 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSDYHQLRIRDSDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNRVFKDFLDSFV
MRLCIDYRELNKVTVKNRYPLP+IDDLFDQLQGATVFSKIDLRS YHQLRIRD DIPKTAFRSRYGHYEFVVMSFGLTNAP VFMDLMNRVFKDFLDSFV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSDYHQLRIRDSDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNRVFKDFLDSFV
Query: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKF------------------HVVPSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFLR
IVFIDDILIYSKTEAEHEEHLHQVLETLRANK HVV SEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDF R
Subjt: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKF------------------HVVPSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFLR
Query: IANPLTQLTRKGTPFVWSPAYESSFQELKQKLVTAPVLTVPNGSGSFVIYSDASKKGLGCVLMQRGKVVAYASRQLKIHEQNYPTHDLELAAVVFAMKIW
IA+PLTQLTRKGTPFVWSPA ESSFQELKQKLV APVLTVP+GSG+FVIYSDASKKGLGCVLMQ+GKVVAYASRQLKIHEQNYPTHDLELAAVVFA+KIW
Subjt: IANPLTQLTRKGTPFVWSPAYESSFQELKQKLVTAPVLTVPNGSGSFVIYSDASKKGLGCVLMQRGKVVAYASRQLKIHEQNYPTHDLELAAVVFAMKIW
Query: RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCDILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTSQLAQLS
RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDC+ILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVT+QLAQLS
Subjt: RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCDILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTSQLAQLS
Query: VQPTLRQKIIVA
VQPTLRQKII A
Subjt: VQPTLRQKIIVA
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| KAA0063793.1 pol protein [Cucumis melo var. makuwa] | 5.8e-211 | 91.5 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSDYHQLRIRDSDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNRVFKDFLDSFV
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS YHQLRIRD DIPKTAFRSRYGHYEFVVMSFGLTNAP VFMDLMNRVFKDFLDSFV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSDYHQLRIRDSDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNRVFKDFLDSFV
Query: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKF------------------HVVPSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFLR
IVFIDDILIYSKTEAEHEEHLHQVLETLRANK HVV SEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDF R
Subjt: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKF------------------HVVPSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFLR
Query: IANPLTQLTRKGTPFVWSPAYESSFQELKQKLVTAPVLTVPNGSGSFVIYSDASKKGLGCVLMQRGKVVAYASRQLKIHEQNYPTHDLELAAVVFAMKIW
IA+PLTQLTRKGTPFVWSPA E SFQELKQKLVTAPVLTVP+GSG+FVIYSDASKKGLGCVLMQ+GKVVAYASRQLKIHEQNYPTHDLELAAVVFA+KIW
Subjt: IANPLTQLTRKGTPFVWSPAYESSFQELKQKLVTAPVLTVPNGSGSFVIYSDASKKGLGCVLMQRGKVVAYASRQLKIHEQNYPTHDLELAAVVFAMKIW
Query: RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCDILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTSQLAQLS
RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDC+ILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVT+QLAQL+
Subjt: RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCDILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTSQLAQLS
Query: VQPTLRQKIIVA
VQPTLRQKII A
Subjt: VQPTLRQKIIVA
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| KAA0066951.1 pol protein [Cucumis melo var. makuwa] | 2.2e-210 | 91.26 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSDYHQLRIRDSDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNRVFKDFLDSFV
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS YHQLRIRD DI KTAFRSRYGHY+FVVMSFGLTNAP VFMDLMNRVFKDFLDSFV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSDYHQLRIRDSDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNRVFKDFLDSFV
Query: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKF------------------HVVPSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFLR
IVFIDDILIYSKTEAEHEEHLHQVLETLRANK HVV SEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDF R
Subjt: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKF------------------HVVPSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFLR
Query: IANPLTQLTRKGTPFVWSPAYESSFQELKQKLVTAPVLTVPNGSGSFVIYSDASKKGLGCVLMQRGKVVAYASRQLKIHEQNYPTHDLELAAVVFAMKIW
IA+PLTQLTRKGTPFVWSPA ESSFQELKQKLVTAPVLTVP+GSG+FVIYSDASKKGLGCVLMQ+GKVVAYASRQLK+HEQNYPTHDLELAAVVFA+KIW
Subjt: IANPLTQLTRKGTPFVWSPAYESSFQELKQKLVTAPVLTVPNGSGSFVIYSDASKKGLGCVLMQRGKVVAYASRQLKIHEQNYPTHDLELAAVVFAMKIW
Query: RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCDILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTSQLAQLS
RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDC+ILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVT+QLAQLS
Subjt: RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCDILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTSQLAQLS
Query: VQPTLRQKIIVA
VQPTLRQKII A
Subjt: VQPTLRQKIIVA
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T7M0 Reverse transcriptase | 1.1e-210 | 91.26 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSDYHQLRIRDSDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNRVFKDFLDSFV
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS YHQLRIRD DIPKTAFRSRYGHYEFVVMSFGLT AP VFMDLMNR+FKDFLDSFV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSDYHQLRIRDSDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNRVFKDFLDSFV
Query: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKF------------------HVVPSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFLR
IVFIDDILIYSKTEAEHEEHLHQVLETLRANK HVV SEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDF R
Subjt: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKF------------------HVVPSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFLR
Query: IANPLTQLTRKGTPFVWSPAYESSFQELKQKLVTAPVLTVPNGSGSFVIYSDASKKGLGCVLMQRGKVVAYASRQLKIHEQNYPTHDLELAAVVFAMKIW
IANPLTQLTRKG PFVWSPA ESSFQELKQKLVTAPVLTVP+GSG+FVIYSDASKKGLGCVLMQ+GKVVAYASRQLKIHEQNYPTHDLELAAVVFA+KIW
Subjt: IANPLTQLTRKGTPFVWSPAYESSFQELKQKLVTAPVLTVPNGSGSFVIYSDASKKGLGCVLMQRGKVVAYASRQLKIHEQNYPTHDLELAAVVFAMKIW
Query: RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCDILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTSQLAQLS
RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDC+ILYHPGKANVVADALSRKVAHSAALITKQTPLL+DFERAEIAVSVGEVT+QLAQLS
Subjt: RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCDILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTSQLAQLS
Query: VQPTLRQKIIVA
VQPTLRQKII A
Subjt: VQPTLRQKIIVA
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| A0A5A7TSL8 Pol protein | 1.3e-216 | 97.72 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSDYHQLRIRDSDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNRVFKDFLDSFV
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSDYHQLRIRDSDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNRVFKDFLDSFV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSDYHQLRIRDSDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNRVFKDFLDSFV
Query: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKFHVVPSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFLRIANPLTQLTRKGTPFVWS
IVFIDDILIYSKTEAEHEEHLHQV HVVPSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFLRIANPLTQLTRKGTPFVWS
Subjt: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKFHVVPSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFLRIANPLTQLTRKGTPFVWS
Query: PAYESSFQELKQKLVTAPVLTVPNGSGSFVIYSDASKKGLGCVLMQRGKVVAYASRQLKIHEQNYPTHDLELAAVVFAMKIWRHYLYGEKIQIYTDHKSL
PAYESSFQELKQKLVTAPVLTVPNGSGSFVIYSDASKKGLGCVLMQRGKVVAYASRQLKIHEQNYPTHDLELAAVVFAMKIWRHYLYGEKIQIYTDHKSL
Subjt: PAYESSFQELKQKLVTAPVLTVPNGSGSFVIYSDASKKGLGCVLMQRGKVVAYASRQLKIHEQNYPTHDLELAAVVFAMKIWRHYLYGEKIQIYTDHKSL
Query: KYFFTQKELNMRQRRWLELVKDYDCDILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQKIIVA
KYFFTQKELNMRQRRWLELVKDYDCDILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQKIIVA
Subjt: KYFFTQKELNMRQRRWLELVKDYDCDILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQKIIVA
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| A0A5A7V4E4 Reverse transcriptase | 3.7e-211 | 91.5 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSDYHQLRIRDSDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNRVFKDFLDSFV
MRLCIDYRELNKVTVKNRYPLP+IDDLFDQLQGATVFSKIDLRS YHQLRIRD DIPKTAFRSRYGHYEFVVMSFGLTNAP VFMDLMNRVFKDFLDSFV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSDYHQLRIRDSDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNRVFKDFLDSFV
Query: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKF------------------HVVPSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFLR
IVFIDDILIYSKTEAEHEEHLHQVLETLRANK HVV SEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDF R
Subjt: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKF------------------HVVPSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFLR
Query: IANPLTQLTRKGTPFVWSPAYESSFQELKQKLVTAPVLTVPNGSGSFVIYSDASKKGLGCVLMQRGKVVAYASRQLKIHEQNYPTHDLELAAVVFAMKIW
IA+PLTQLTRKGTPFVWSPA ESSFQELKQKLV APVLTVP+GSG+FVIYSDASKKGLGCVLMQ+GKVVAYASRQLKIHEQNYPTHDLELAAVVFA+KIW
Subjt: IANPLTQLTRKGTPFVWSPAYESSFQELKQKLVTAPVLTVPNGSGSFVIYSDASKKGLGCVLMQRGKVVAYASRQLKIHEQNYPTHDLELAAVVFAMKIW
Query: RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCDILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTSQLAQLS
RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDC+ILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVT+QLAQLS
Subjt: RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCDILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTSQLAQLS
Query: VQPTLRQKIIVA
VQPTLRQKII A
Subjt: VQPTLRQKIIVA
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| A0A5A7V6R2 Reverse transcriptase | 2.8e-211 | 91.5 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSDYHQLRIRDSDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNRVFKDFLDSFV
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS YHQLRIRD DIPKTAFRSRYGHYEFVVMSFGLTNAP VFMDLMNRVFKDFLDSFV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSDYHQLRIRDSDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNRVFKDFLDSFV
Query: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKF------------------HVVPSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFLR
IVFIDDILIYSKTEAEHEEHLHQVLETLRANK HVV SEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDF R
Subjt: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKF------------------HVVPSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFLR
Query: IANPLTQLTRKGTPFVWSPAYESSFQELKQKLVTAPVLTVPNGSGSFVIYSDASKKGLGCVLMQRGKVVAYASRQLKIHEQNYPTHDLELAAVVFAMKIW
IA+PLTQLTRKGTPFVWSPA E SFQELKQKLVTAPVLTVP+GSG+FVIYSDASKKGLGCVLMQ+GKVVAYASRQLKIHEQNYPTHDLELAAVVFA+KIW
Subjt: IANPLTQLTRKGTPFVWSPAYESSFQELKQKLVTAPVLTVPNGSGSFVIYSDASKKGLGCVLMQRGKVVAYASRQLKIHEQNYPTHDLELAAVVFAMKIW
Query: RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCDILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTSQLAQLS
RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDC+ILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVT+QLAQL+
Subjt: RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCDILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTSQLAQLS
Query: VQPTLRQKIIVA
VQPTLRQKII A
Subjt: VQPTLRQKIIVA
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| A0A5A7VMR4 Reverse transcriptase | 1.1e-210 | 91.26 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSDYHQLRIRDSDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNRVFKDFLDSFV
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS YHQLRIRD DI KTAFRSRYGHY+FVVMSFGLTNAP VFMDLMNRVFKDFLDSFV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSDYHQLRIRDSDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNRVFKDFLDSFV
Query: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKF------------------HVVPSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFLR
IVFIDDILIYSKTEAEHEEHLHQVLETLRANK HVV SEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDF R
Subjt: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKF------------------HVVPSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFLR
Query: IANPLTQLTRKGTPFVWSPAYESSFQELKQKLVTAPVLTVPNGSGSFVIYSDASKKGLGCVLMQRGKVVAYASRQLKIHEQNYPTHDLELAAVVFAMKIW
IA+PLTQLTRKGTPFVWSPA ESSFQELKQKLVTAPVLTVP+GSG+FVIYSDASKKGLGCVLMQ+GKVVAYASRQLK+HEQNYPTHDLELAAVVFA+KIW
Subjt: IANPLTQLTRKGTPFVWSPAYESSFQELKQKLVTAPVLTVPNGSGSFVIYSDASKKGLGCVLMQRGKVVAYASRQLKIHEQNYPTHDLELAAVVFAMKIW
Query: RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCDILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTSQLAQLS
RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDC+ILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVT+QLAQLS
Subjt: RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCDILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTSQLAQLS
Query: VQPTLRQKIIVA
VQPTLRQKII A
Subjt: VQPTLRQKIIVA
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| SwissProt top hits | e value | %identity | Alignment |
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| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 1.0e-72 | 39.34 | Show/hide |
Query: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSDYHQLRIRDSDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNRVFKDFLDSFVI
R+ IDYR+LN++TV +R+P+P +D++ +L F+ IDL +HQ+ + + KTAF +++GHYE++ M FGL NAP F MN + + L+ +
Subjt: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSDYHQLRIRDSDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNRVFKDFLDSFVI
Query: VFIDDILIYSKTEAEHEEHLHQVLETL-RAN--------KF---------HVVPSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFLRI
V++DDI+++S + EH + L V E L +AN +F HV+ +G+ +P KIEA+ +P P+ EI++FLGL GYYR+F+ +F I
Subjt: VFIDDILIYSKTEAEHEEHLHQVLETL-RAN--------KF---------HVVPSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFLRI
Query: ANPLTQLTRKGTPF-VWSPAYESSFQELKQKLVTAPVLTVPNGSGSFVIYSDASKKGLGCVLMQRGKVVAYASRQLKIHEQNYPTHDLELAAVVFAMKIW
A P+T+ +K +P Y+S+F++LK + P+L VP+ + F + +DAS LG VL Q G ++Y SR L HE NY T + EL A+V+A K +
Subjt: ANPLTQLTRKGTPF-VWSPAYESSFQELKQKLVTAPVLTVPNGSGSFVIYSDASKKGLGCVLMQRGKVVAYASRQLKIHEQNYPTHDLELAAVVFAMKIW
Query: RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCDILYHPGKANVVADALSR
RHYL G +I +DH+ L + + K+ N + RW + ++D DI Y GK N VADALSR
Subjt: RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCDILYHPGKANVVADALSR
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| P10401 Retrovirus-related Pol polyprotein from transposon gypsy | 5.0e-64 | 35.29 | Show/hide |
Query: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSDYHQLRIRDSDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNRVFKDFLDSFVI
RL ID+R+LN+ T+ +RYP+P I + L A F+ +DL+S YHQ+ + + D KT+F G YEF + FGL NA ++F ++ V ++ +
Subjt: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSDYHQLRIRDSDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNRVFKDFLDSFVI
Query: VFIDDILIYSKTEAEHEEHLHQVLETL---------RANKF---------HVVPSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFLRI
V++DD++I+S+ E++H H+ VL+ L +F +V +G DP K++A+ +P P V ++RSFLGLA YYR F++DF I
Subjt: VFIDDILIYSKTEAEHEEHLHQVLETL---------RANKF---------HVVPSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFLRI
Query: ANPLTQLTR-----------KGTPFVWSPAYESSFQELKQKLVTAPV-LTVPNGSGSFVIYSDASKKGLGCVLMQRGKVVAYASRQLKIHEQNYPTHDLE
A P+T + + K P ++ ++FQ L+ L + V L P+ F + +DAS G+G VL Q G+ + SR LK EQNY T++ E
Subjt: ANPLTQLTR-----------KGTPFVWSPAYESSFQELKQKLVTAPV-LTVPNGSGSFVIYSDASKKGLGCVLMQRGKVVAYASRQLKIHEQNYPTHDLE
Query: LAAVVFAMKIWRHYLYGEK-IQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCDILYHPGKANVVADALSRK
L A+V+A+ +++LYG + I I+TDH+ L + + N + +RW + ++ + Y PGK N VADALSR+
Subjt: LAAVVFAMKIWRHYLYGEK-IQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCDILYHPGKANVVADALSRK
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 1.5e-68 | 37.4 | Show/hide |
Query: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSDYHQLRIRDSDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNRVFKDFLDSFVI
R+ IDYR+LN++T+ +RYP+P +D++ +L F+ IDL +HQ+ + + I KTAF ++ GHYE++ M FGL NAP F MN + + L+ +
Subjt: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSDYHQLRIRDSDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNRVFKDFLDSFVI
Query: VFIDDILIYSKTEAEHEEHLHQVLETL-----------------RANKF-HVVPSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFLRI
V++DDI+I+S + EH + V L AN H+V +G+ +P K++A+ ++P P+ EIR+FLGL GYYR+F+ ++ I
Subjt: VFIDDILIYSKTEAEHEEHLHQVLETL-----------------RANKF-HVVPSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFLRI
Query: ANPLTQLTRKGTPF-VWSPAYESSFQELKQKLVTAPVLTVPNGSGSFVIYSDASKKGLGCVLMQRGKVVAYASRQLKIHEQNYPTHDLELAAVVFAMKIW
A P+T +K T Y +F++LK ++ P+L +P+ FV+ +DAS LG VL Q G +++ SR L HE NY + EL A+V+A K +
Subjt: ANPLTQLTRKGTPF-VWSPAYESSFQELKQKLVTAPVLTVPNGSGSFVIYSDASKKGLGCVLMQRGKVVAYASRQLKIHEQNYPTHDLELAAVVFAMKIW
Query: RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCDILYHPGKANVVADALSR
RHYL G + I +DH+ L++ KE + RW + +Y I Y GK N VADALSR
Subjt: RHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCDILYHPGKANVVADALSR
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 7.4e-68 | 35.64 | Show/hide |
Query: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSDYHQLRIRDSDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNRVFKDFLDSFVI
R+ +D++ LN VT+ + YP+P I+ L A F+ +DL S +HQ+ +++SDIPKTAF + G YEF+ + FGL NAP +F +++ + ++ +
Subjt: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSDYHQLRIRDSDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNRVFKDFLDSFVI
Query: VFIDDILIYSKTEAEHEEHLHQVLETL-RAN------KFH-----------VVPSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFLRI
V+IDDI+++S+ H ++L VL +L +AN K H +V ++G+ DP K+ A++ P P++V E++ FLG+ YYR+F++D+ ++
Subjt: VFIDDILIYSKTEAEHEEHLHQVLETL-RAN------KFH-----------VVPSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFLRI
Query: ANPLTQLTR-----------KGTPFVWSPAYESSFQELKQKLVTAPVLTVPNGSGSFVIYSDASKKGLGCVLMQ----RGKVVAYASRQLKIHEQNYPTH
A PLT LTR P SF +LK L ++ +L P + F + +DAS +G VL Q R + +AY SR L E+NY T
Subjt: ANPLTQLTR-----------KGTPFVWSPAYESSFQELKQKLVTAPVLTVPNGSGSFVIYSDASKKGLGCVLMQ----RGKVVAYASRQLKIHEQNYPTH
Query: DLELAAVVFAMKIWRHYLYGE-KIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCDILYHPGKANVVADALSR
+ E+ A+++++ R YLYG I++YTDH+ L + + N + +RW +++Y+C+++Y PGK+NVVADALSR
Subjt: DLELAAVVFAMKIWRHYLYGE-KIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCDILYHPGKANVVADALSR
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 5.1e-61 | 38.04 | Show/hide |
Query: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSDYHQLRIRDSDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNRVFKDFLDSFVI
RLC+DYR LNK T+ + +PLPRID+L ++ A +F+ +DL S YHQ+ + D KTAF + G YE+ VM FGL NAP+ F M F+D FV
Subjt: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSDYHQLRIRDSDIPKTAFRSRYGHYEFVVMSFGLTNAPTVFMDLMNRVFKDFLDSFVI
Query: VFIDDILIYSKTEAEHEEHLHQVLETLRAN---------KFHVVPSE--GVSVDPAKI-------EAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFLRI
V++DDILI+S++ EH +HL VLE L+ KF +E G S+ KI A+ ++P P TV + + FLG+ YYRRF+ + +I
Subjt: VFIDDILIYSKTEAEHEEHLHQVLETLRAN---------KFHVVPSE--GVSVDPAKI-------EAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFLRI
Query: ANPLTQLTRKGTPFVWSPAYESSFQELKQKLVTAPVLTVPNGSGSFVIYSDASKKGLGCVLMQ---RGK---VVAYASRQLKIHEQNYPTHDLELAAVVF
A P+ + W+ + + +LK L +PVL N ++ + +DASK G+G VL + + K VV Y S+ L+ ++NYP +LEL ++
Subjt: ANPLTQLTRKGTPFVWSPAYESSFQELKQKLVTAPVLTVPNGSGSFVIYSDASKKGLGCVLMQ---RGK---VVAYASRQLKIHEQNYPTHDLELAAVVF
Query: AMKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCDILYHPGKANVVADALSRKV
A+ +R+ L+G+ + TDH SL + E R +RWL+ + YD + Y G NVVADA+SR V
Subjt: AMKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCDILYHPGKANVVADALSRKV
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