| GenBank top hits | e value | %identity | Alignment |
|---|
| AAO45752.1 pol protein [Cucumis melo subsp. melo] | 1.6e-235 | 98.55 | Show/hide |
Query: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTV+NRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Query: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
TAFRSRYGHY+FIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDLAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
VSVD AKIEAVTGW RPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSG+FVIYSDASKKGL
Subjt: VSVDLAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Query: GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt: GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Query: LSRKVSHSAALITR
LSRKVSHSAALITR
Subjt: LSRKVSHSAALITR
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| KAA0037244.1 reverse transcriptase [Cucumis melo var. makuwa] | 9.3e-236 | 98.79 | Show/hide |
Query: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTV+NRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Query: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTE EHEEHLRMVLQTLRDNKLYAKF KCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDLAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
VSVD AKIEAVTGW RPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt: VSVDLAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Query: GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt: GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Query: LSRKVSHSAALITR
LSRKVSHSAALITR
Subjt: LSRKVSHSAALITR
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| KAA0040689.1 pol protein [Cucumis melo var. makuwa] | 2.1e-235 | 98.55 | Show/hide |
Query: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
MAPAELKELKVQLQELLDKGFIRPS+SPWGAPVLFVKKKDGSMRLCIDYRELNKVTV+NRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Query: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDLAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
VSVD KIEAVTGW RPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVL VPDGSGSFVIYSDASKKGL
Subjt: VSVDLAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Query: GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt: GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Query: LSRKVSHSAALITR
LSRKVSHSAALITR
Subjt: LSRKVSHSAALITR
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| KAA0048687.1 pol protein [Cucumis melo var. makuwa] | 6.5e-237 | 99.28 | Show/hide |
Query: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTV+NRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Query: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDLAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
VSVD AKIEAVTGW RPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt: VSVDLAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Query: GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt: GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Query: LSRKVSHSAALITR
LSRKVSHSAALITR
Subjt: LSRKVSHSAALITR
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| TYK01613.1 pol protein [Cucumis melo var. makuwa] | 3.2e-236 | 99.03 | Show/hide |
Query: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTV+NRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Query: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDLAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
VSVD AKIEAVTGW RPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt: VSVDLAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Query: GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt: GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Query: LSRKVSHSAALITR
LSRKVSHSAALITR
Subjt: LSRKVSHSAALITR
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A5A7T190 Reverse transcriptase | 4.5e-236 | 98.79 | Show/hide |
Query: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTV+NRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Query: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTE EHEEHLRMVLQTLRDNKLYAKF KCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDLAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
VSVD AKIEAVTGW RPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt: VSVDLAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Query: GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt: GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Query: LSRKVSHSAALITR
LSRKVSHSAALITR
Subjt: LSRKVSHSAALITR
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| A0A5A7THE6 Reverse transcriptase | 1.0e-235 | 98.55 | Show/hide |
Query: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
MAPAELKELKVQLQELLDKGFIRPS+SPWGAPVLFVKKKDGSMRLCIDYRELNKVTV+NRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Query: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDLAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
VSVD KIEAVTGW RPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVL VPDGSGSFVIYSDASKKGL
Subjt: VSVDLAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Query: GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt: GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Query: LSRKVSHSAALITR
LSRKVSHSAALITR
Subjt: LSRKVSHSAALITR
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| A0A5A7U330 Reverse transcriptase | 3.1e-237 | 99.28 | Show/hide |
Query: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTV+NRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Query: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDLAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
VSVD AKIEAVTGW RPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt: VSVDLAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Query: GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt: GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Query: LSRKVSHSAALITR
LSRKVSHSAALITR
Subjt: LSRKVSHSAALITR
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| A0A5D3BPI1 Reverse transcriptase | 1.6e-236 | 99.03 | Show/hide |
Query: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTV+NRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Query: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDLAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
VSVD AKIEAVTGW RPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt: VSVDLAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Query: GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt: GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Query: LSRKVSHSAALITR
LSRKVSHSAALITR
Subjt: LSRKVSHSAALITR
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| Q84KB0 Pol protein | 7.7e-236 | 98.55 | Show/hide |
Query: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTV+NRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt: MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Query: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
TAFRSRYGHY+FIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDLAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
VSVD AKIEAVTGW RPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSG+FVIYSDASKKGL
Subjt: VSVDLAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Query: GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt: GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Query: LSRKVSHSAALITR
LSRKVSHSAALITR
Subjt: LSRKVSHSAALITR
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| SwissProt top hits | e value | %identity | Alignment |
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| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 1.2e-87 | 40.69 | Show/hide |
Query: KELKVQLQELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKT
+E++ Q+Q++L++G IR S SP+ +P+ V KK+D S R+ IDYR+LN++TV +R+P+P +D++ +L F+ IDL G+HQ+ + E V KT
Subjt: KELKVQLQELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKT
Query: AFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGV
AF +++GHYE++ M FGL NAPA F MN + R L+ +V++DDI+++S + EH + L +V + L L + KCEF ++ +FLGHV++ G+
Subjt: AFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGV
Query: SVDLAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDS-FQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
+ KIEA+ + P+ E+++FLGL GYYR+F+ NF+ IA P+T+ +K + DS F+ LK + P+L VPD + F + +DAS L
Subjt: SVDLAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDS-FQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Query: GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
G VL Q G ++Y SR L HE NY T + EL A+V+A K +RHYL G +I +DH+ L + + K+ N + RW + ++D +I Y GK N VADA
Subjt: GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Query: LSR
LSR
Subjt: LSR
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 1.7e-86 | 39.55 | Show/hide |
Query: ELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA
E++ Q+QE+L++G IR S SP+ +P V KK R+ IDYR+LN++T+ +RYP+P +D++ +L F+ IDL G+HQ+ + +E + KTA
Subjt: ELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA
Query: FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVS
F ++ GHYE++ M FGL NAPA F MN + R L+ +V++DDI+I+S + EH +++V L D L + KCEF K+ +FLGH+V+ G+
Subjt: FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVS
Query: VDLAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSK-ACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLG
+ K++A+ + P+ E+R+FLGL GYYR+F+ N++ IA P+T +K K ++F+ LK ++ P+L +PD FV+ +DAS LG
Subjt: VDLAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSK-ACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLG
Query: CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADAL
VL Q G +++ SR L HE NY + EL A+V+A K +RHYL G + I +DH+ L++ KE + RW + +Y +I Y GK N VADAL
Subjt: CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADAL
Query: SR
SR
Subjt: SR
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 2.0e-79 | 39.51 | Show/hide |
Query: KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSR
+E+ +Q+LLD FI PS SP +PV+ V KKDG+ RLC+DYR LNK T+ + +PLPRID+L ++ A +F+ +DL SGYHQ+ ++ +D KTAF +
Subjt: KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSR
Query: YGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLA
G YE+ VM FGL NAP+ F M FR+ FV V++DDILI+S++ EH +HL VL+ L++ L K KC+F ++ FLG+ + ++
Subjt: YGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLA
Query: KIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQ
K A+ + P TV + + FLG+ YYRRF+ N S+IA P+ + W++ + + + LK L +PVL + ++ + +DASK G+G VL +
Subjt: KIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQ
Query: QGK------VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
VV Y S+ L+S ++NYP +LEL ++ AL +R+ L+G+ + TDH SL + E R +RWL+ + YD + Y G NVVADA
Subjt: QGK------VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Query: LSRKV
+SR +
Subjt: LSRKV
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 2.5e-82 | 37.17 | Show/hide |
Query: ELKVQLQELLDKGFIRPSVSPWGAPVLFVKKK-----DGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA
E++ Q+ ELL G IRPS SP+ +P+ V KK + R+ +D++ LN VT+ + YP+P I+ L A F+ +DL SG+HQ+ +K+ D+PKTA
Subjt: ELKVQLQELLDKGFIRPSVSPWGAPVLFVKKK-----DGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA
Query: FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVS
F + G YEF+ + FGL NAPA+F +++ + RE + V+IDDI+++S+ H ++LR+VL +L L K F QV FLG++V+ G+
Subjt: FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVS
Query: VDLAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTR-----------KGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVI
D K+ A++ P++V E++ FLG+ YYR+F+++++++A PLT LTR P + SF +LK L ++ +L P + F +
Subjt: VDLAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTR-----------KGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVI
Query: YSDASKKGLGCVLMQ----QGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGE-KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCE
+DAS +G VL Q + + +AY SR L E+NY T + E+ A++++L R YLYG I+++TDH+ L + + N + +RW +++Y+CE
Subjt: YSDASKKGLGCVLMQ----QGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGE-KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCE
Query: ILYHPGKANVVADALSR
++Y PGK+NVVADALSR
Subjt: ILYHPGKANVVADALSR
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 2.0e-79 | 39.75 | Show/hide |
Query: KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSR
+E+ +Q+LLD FI PS SP +PV+ V KKDG+ RLC+DYR LNK T+ + +PLPRID+L ++ A +F+ +DL SGYHQ+ ++ +D KTAF +
Subjt: KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSR
Query: YGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLA
G YE+ VM FGL NAP+ F M FR+ FV V++DDILI+S++ EH +HL VL+ L++ L K KC+F ++ FLG+ + ++
Subjt: YGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLA
Query: KIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQ
K A+ + P TV + + FLG+ YYRRF+ N S+IA P+ + W++ + + LK L +PVL + ++ + +DASK G+G VL +
Subjt: KIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQ
Query: QGK------VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
VV Y S+ L+S ++NYP +LEL ++ AL +R+ L+G+ + TDH SL + E R +RWL+ + YD + Y G NVVADA
Subjt: QGK------VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Query: LSRKV
+SR V
Subjt: LSRKV
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