; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc07g0193251 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc07g0193251
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTransposon Ty3-I Gag-Pol polyprotein
Genome locationCMiso1.1chr07:14654077..14654835
RNA-Seq ExpressionCmc07g0193251
SyntenyCmc07g0193251
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037227.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]1.7e-10780.8Show/hide
Query:  MVQWPQPTDITRLRGFLGLTRYYRRFVKGYGKIAAPLTKLLQNNSFKWDDEATLAFEDLKLAMTIIPVLALSDWSLPFVVETDASGSWLGAVLSQNGHPI
        M+QWPQP DIT LRGFLGLT YYRRFVK YG+IAAPLTKLLQ N+FKWD+EATLAFE LK AMT IPVLAL DWSLPF++ETDASGS LGAVLSQN HPI
Subjt:  MVQWPQPTDITRLRGFLGLTRYYRRFVKGYGKIAAPLTKLLQNNSFKWDDEATLAFEDLKLAMTIIPVLALSDWSLPFVVETDASGSWLGAVLSQNGHPI

Query:  AFFSQKLSMRAQNKSIYERELMAVVLAVQKWRHYLLGRRFTIMSDKKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQTGLQNKAADALSRVTTPSELN
        AFFSQKLS RAQ+KSIYERELM VVL+VQKWRHYLLGRRFTI+SD+KALKFLLEQREVQPQFQKWLTKLLGYDFEI+YQ GLQNKAADALSRV  P ELN
Subjt:  AFFSQKLSMRAQNKSIYERELMAVVLAVQKWRHYLLGRRFTIMSDKKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQTGLQNKAADALSRVTTPSELN

Query:  IMTTLGIVDMETVTKEVEGDEELQKIVEQLQSGNPSEGSYTWENGRCFIK
         M+T GIVDME VTKEVE DEELQ+I +QLQ   P EG Y+  NG+   K
Subjt:  IMTTLGIVDMETVTKEVEGDEELQKIVEQLQSGNPSEGSYTWENGRCFIK

KAA0045291.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]6.5e-139100Show/hide
Query:  MVQWPQPTDITRLRGFLGLTRYYRRFVKGYGKIAAPLTKLLQNNSFKWDDEATLAFEDLKLAMTIIPVLALSDWSLPFVVETDASGSWLGAVLSQNGHPI
        MVQWPQPTDITRLRGFLGLTRYYRRFVKGYGKIAAPLTKLLQNNSFKWDDEATLAFEDLKLAMTIIPVLALSDWSLPFVVETDASGSWLGAVLSQNGHPI
Subjt:  MVQWPQPTDITRLRGFLGLTRYYRRFVKGYGKIAAPLTKLLQNNSFKWDDEATLAFEDLKLAMTIIPVLALSDWSLPFVVETDASGSWLGAVLSQNGHPI

Query:  AFFSQKLSMRAQNKSIYERELMAVVLAVQKWRHYLLGRRFTIMSDKKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQTGLQNKAADALSRVTTPSELN
        AFFSQKLSMRAQNKSIYERELMAVVLAVQKWRHYLLGRRFTIMSDKKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQTGLQNKAADALSRVTTPSELN
Subjt:  AFFSQKLSMRAQNKSIYERELMAVVLAVQKWRHYLLGRRFTIMSDKKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQTGLQNKAADALSRVTTPSELN

Query:  IMTTLGIVDMETVTKEVEGDEELQKIVEQLQSGNPSEGSYTWENGRCFIKEE
        IMTTLGIVDMETVTKEVEGDEELQKIVEQLQSGNPSEGSYTWENGRCFIKEE
Subjt:  IMTTLGIVDMETVTKEVEGDEELQKIVEQLQSGNPSEGSYTWENGRCFIKEE

KAA0054754.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]1.1e-10681.6Show/hide
Query:  MVQWPQPTDITRLRGFLGLTRYYRRFVKGYGKIAAPLTKLLQNNSFKWDDEATLAFEDLKLAMTIIPVLALSDWSLPFVVETDASGSWLGAVLSQNGHPI
        M+QWPQP DITRLRGFL LT YYRRFVKGYG+I APLTKLLQ NSFKWD EA LAFE+LKL MT   VLAL DWSLPFVVETDASG  LGAVLSQNGHPI
Subjt:  MVQWPQPTDITRLRGFLGLTRYYRRFVKGYGKIAAPLTKLLQNNSFKWDDEATLAFEDLKLAMTIIPVLALSDWSLPFVVETDASGSWLGAVLSQNGHPI

Query:  AFFSQKLSMRAQNKSIYERELMAVVLAVQKWRHYLLGRRFTIMSDKKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQTGLQNKAADALSRVTTPSELN
        AFFSQKLS RAQ KSIY RELM VVL+VQKWRHYLLGR+FTIMSD+KALKFLLEQREVQPQFQKWLT LLGYDFEILYQ GLQNKAADALSR+ T  EL 
Subjt:  AFFSQKLSMRAQNKSIYERELMAVVLAVQKWRHYLLGRRFTIMSDKKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQTGLQNKAADALSRVTTPSELN

Query:  IMTTLGIVDMETVTKEVEGDEELQKIVEQLQSGNPSEGSYTWENGRCFIK
         MTT G VDMETV KEVE D +LQKIVEQLQ G P EG Y WENGR   K
Subjt:  IMTTLGIVDMETVTKEVEGDEELQKIVEQLQSGNPSEGSYTWENGRCFIK

TYK07972.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]9.4e-10680.4Show/hide
Query:  MVQWPQPTDITRLRGFLGLTRYYRRFVKGYGKIAAPLTKLLQNNSFKWDDEATLAFEDLKLAMTIIPVLALSDWSLPFVVETDASGSWLGAVLSQNGHPI
        M+QWPQP DIT LRGFLGLT YYRRFVK YG+IAAPLTKLLQ N+FKWD+ ATLAFE LK AMT I VLAL DWSLPF++ETDASGS LGAVLSQNGHPI
Subjt:  MVQWPQPTDITRLRGFLGLTRYYRRFVKGYGKIAAPLTKLLQNNSFKWDDEATLAFEDLKLAMTIIPVLALSDWSLPFVVETDASGSWLGAVLSQNGHPI

Query:  AFFSQKLSMRAQNKSIYERELMAVVLAVQKWRHYLLGRRFTIMSDKKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQTGLQNKAADALSRVTTPSELN
        AFFSQKLS RAQ+KS YERELMAVVL+VQKWRHYL+GRRFTI+SD+KALKFLLEQREVQPQFQKWLTKLLGYDFEILYQ GLQNKAADALSRV   SELN
Subjt:  AFFSQKLSMRAQNKSIYERELMAVVLAVQKWRHYLLGRRFTIMSDKKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQTGLQNKAADALSRVTTPSELN

Query:  IMTTLGIVDMETVTKEVEGDEELQKIVEQLQSGNPSEGSYTWENGRCFIK
         M+T GIVDMETVTKEVE DEELQ I +QLQ+    EG Y+  NG+   K
Subjt:  IMTTLGIVDMETVTKEVEGDEELQKIVEQLQSGNPSEGSYTWENGRCFIK

TYK31690.1 Transposon Tf2-6 polyprotein [Cucumis melo var. makuwa]1.3e-11896.05Show/hide
Query:  MVQWPQPTDITRLRGFLGLTRYYRRFVKGYGKIAAPLTKLLQNNSFKWDDEATLAFEDLKLAMTIIPVLALSDWSLPFVVETDASGSWLGAVLSQNGHPI
        MVQWPQPTDITRLRGFLGLT YYRRFVKGYGKIAAPLTKLLQ NSFKWDDEATLAFEDLKLAMT IPVLALSDWSLPFVVETDASGSWLGAVLSQNGHPI
Subjt:  MVQWPQPTDITRLRGFLGLTRYYRRFVKGYGKIAAPLTKLLQNNSFKWDDEATLAFEDLKLAMTIIPVLALSDWSLPFVVETDASGSWLGAVLSQNGHPI

Query:  AFFSQKLSMRAQNKSIYERELMAVVLAVQKWRHYLLGRRFTIMSDKKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQTGLQNKAADALSRVTTPSELN
        AFFSQKLSMRAQNKSIYERELMA+VLAVQKWRHY+LGRRFTIMSD+KALKFLLEQREVQPQFQKWLTKLLGYDFEILYQTGLQNKAADALSRVTTPSELN
Subjt:  AFFSQKLSMRAQNKSIYERELMAVVLAVQKWRHYLLGRRFTIMSDKKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQTGLQNKAADALSRVTTPSELN

Query:  IMTTLGIVDMETVTKEVEGDEELQKIVE
         MTT GI+DMETVTKEVEGDEELQKIVE
Subjt:  IMTTLGIVDMETVTKEVEGDEELQKIVE

TrEMBL top hitse value%identityAlignment
A0A5A7TUV0 Transposon Ty3-I Gag-Pol polyprotein3.1e-139100Show/hide
Query:  MVQWPQPTDITRLRGFLGLTRYYRRFVKGYGKIAAPLTKLLQNNSFKWDDEATLAFEDLKLAMTIIPVLALSDWSLPFVVETDASGSWLGAVLSQNGHPI
        MVQWPQPTDITRLRGFLGLTRYYRRFVKGYGKIAAPLTKLLQNNSFKWDDEATLAFEDLKLAMTIIPVLALSDWSLPFVVETDASGSWLGAVLSQNGHPI
Subjt:  MVQWPQPTDITRLRGFLGLTRYYRRFVKGYGKIAAPLTKLLQNNSFKWDDEATLAFEDLKLAMTIIPVLALSDWSLPFVVETDASGSWLGAVLSQNGHPI

Query:  AFFSQKLSMRAQNKSIYERELMAVVLAVQKWRHYLLGRRFTIMSDKKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQTGLQNKAADALSRVTTPSELN
        AFFSQKLSMRAQNKSIYERELMAVVLAVQKWRHYLLGRRFTIMSDKKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQTGLQNKAADALSRVTTPSELN
Subjt:  AFFSQKLSMRAQNKSIYERELMAVVLAVQKWRHYLLGRRFTIMSDKKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQTGLQNKAADALSRVTTPSELN

Query:  IMTTLGIVDMETVTKEVEGDEELQKIVEQLQSGNPSEGSYTWENGRCFIKEE
        IMTTLGIVDMETVTKEVEGDEELQKIVEQLQSGNPSEGSYTWENGRCFIKEE
Subjt:  IMTTLGIVDMETVTKEVEGDEELQKIVEQLQSGNPSEGSYTWENGRCFIKEE

A0A5A7TZ91 Transposon Ty3-G Gag-Pol polyprotein4.6e-10680.4Show/hide
Query:  MVQWPQPTDITRLRGFLGLTRYYRRFVKGYGKIAAPLTKLLQNNSFKWDDEATLAFEDLKLAMTIIPVLALSDWSLPFVVETDASGSWLGAVLSQNGHPI
        M+QWPQP DIT LRGFLGLT YYRRFVK YG+IAAPLTKLLQ N+FKWD+ ATLAFE LK AMT I VLAL DWSLPF++ETDASGS LGAVLSQNGHPI
Subjt:  MVQWPQPTDITRLRGFLGLTRYYRRFVKGYGKIAAPLTKLLQNNSFKWDDEATLAFEDLKLAMTIIPVLALSDWSLPFVVETDASGSWLGAVLSQNGHPI

Query:  AFFSQKLSMRAQNKSIYERELMAVVLAVQKWRHYLLGRRFTIMSDKKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQTGLQNKAADALSRVTTPSELN
        AFFSQKLS RAQ+KS YERELMAVVL+VQKWRHYL+GRRFTI+SD+KALKFLLEQREVQPQFQKWLTKLLGYDFEILYQ GLQNKAADALSRV   SELN
Subjt:  AFFSQKLSMRAQNKSIYERELMAVVLAVQKWRHYLLGRRFTIMSDKKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQTGLQNKAADALSRVTTPSELN

Query:  IMTTLGIVDMETVTKEVEGDEELQKIVEQLQSGNPSEGSYTWENGRCFIK
         M+T GIVDMETVTKEVE DEELQ I +QLQ+    EG Y+  NG+   K
Subjt:  IMTTLGIVDMETVTKEVEGDEELQKIVEQLQSGNPSEGSYTWENGRCFIK

A0A5A7UHY0 Transposon Ty3-G Gag-Pol polyprotein5.4e-10781.6Show/hide
Query:  MVQWPQPTDITRLRGFLGLTRYYRRFVKGYGKIAAPLTKLLQNNSFKWDDEATLAFEDLKLAMTIIPVLALSDWSLPFVVETDASGSWLGAVLSQNGHPI
        M+QWPQP DITRLRGFL LT YYRRFVKGYG+I APLTKLLQ NSFKWD EA LAFE+LKL MT   VLAL DWSLPFVVETDASG  LGAVLSQNGHPI
Subjt:  MVQWPQPTDITRLRGFLGLTRYYRRFVKGYGKIAAPLTKLLQNNSFKWDDEATLAFEDLKLAMTIIPVLALSDWSLPFVVETDASGSWLGAVLSQNGHPI

Query:  AFFSQKLSMRAQNKSIYERELMAVVLAVQKWRHYLLGRRFTIMSDKKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQTGLQNKAADALSRVTTPSELN
        AFFSQKLS RAQ KSIY RELM VVL+VQKWRHYLLGR+FTIMSD+KALKFLLEQREVQPQFQKWLT LLGYDFEILYQ GLQNKAADALSR+ T  EL 
Subjt:  AFFSQKLSMRAQNKSIYERELMAVVLAVQKWRHYLLGRRFTIMSDKKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQTGLQNKAADALSRVTTPSELN

Query:  IMTTLGIVDMETVTKEVEGDEELQKIVEQLQSGNPSEGSYTWENGRCFIK
         MTT G VDMETV KEVE D +LQKIVEQLQ G P EG Y WENGR   K
Subjt:  IMTTLGIVDMETVTKEVEGDEELQKIVEQLQSGNPSEGSYTWENGRCFIK

A0A5D3CPQ1 Transposon Ty3-G Gag-Pol polyprotein8.3e-10880.8Show/hide
Query:  MVQWPQPTDITRLRGFLGLTRYYRRFVKGYGKIAAPLTKLLQNNSFKWDDEATLAFEDLKLAMTIIPVLALSDWSLPFVVETDASGSWLGAVLSQNGHPI
        M+QWPQP DIT LRGFLGLT YYRRFVK YG+IAAPLTKLLQ N+FKWD+EATLAFE LK AMT IPVLAL DWSLPF++ETDASGS LGAVLSQN HPI
Subjt:  MVQWPQPTDITRLRGFLGLTRYYRRFVKGYGKIAAPLTKLLQNNSFKWDDEATLAFEDLKLAMTIIPVLALSDWSLPFVVETDASGSWLGAVLSQNGHPI

Query:  AFFSQKLSMRAQNKSIYERELMAVVLAVQKWRHYLLGRRFTIMSDKKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQTGLQNKAADALSRVTTPSELN
        AFFSQKLS RAQ+KSIYERELM VVL+VQKWRHYLLGRRFTI+SD+KALKFLLEQREVQPQFQKWLTKLLGYDFEI+YQ GLQNKAADALSRV  P ELN
Subjt:  AFFSQKLSMRAQNKSIYERELMAVVLAVQKWRHYLLGRRFTIMSDKKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQTGLQNKAADALSRVTTPSELN

Query:  IMTTLGIVDMETVTKEVEGDEELQKIVEQLQSGNPSEGSYTWENGRCFIK
         M+T GIVDME VTKEVE DEELQ+I +QLQ   P EG Y+  NG+   K
Subjt:  IMTTLGIVDMETVTKEVEGDEELQKIVEQLQSGNPSEGSYTWENGRCFIK

A0A5D3E7V3 Transposon Tf2-6 polyprotein6.1e-11996.05Show/hide
Query:  MVQWPQPTDITRLRGFLGLTRYYRRFVKGYGKIAAPLTKLLQNNSFKWDDEATLAFEDLKLAMTIIPVLALSDWSLPFVVETDASGSWLGAVLSQNGHPI
        MVQWPQPTDITRLRGFLGLT YYRRFVKGYGKIAAPLTKLLQ NSFKWDDEATLAFEDLKLAMT IPVLALSDWSLPFVVETDASGSWLGAVLSQNGHPI
Subjt:  MVQWPQPTDITRLRGFLGLTRYYRRFVKGYGKIAAPLTKLLQNNSFKWDDEATLAFEDLKLAMTIIPVLALSDWSLPFVVETDASGSWLGAVLSQNGHPI

Query:  AFFSQKLSMRAQNKSIYERELMAVVLAVQKWRHYLLGRRFTIMSDKKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQTGLQNKAADALSRVTTPSELN
        AFFSQKLSMRAQNKSIYERELMA+VLAVQKWRHY+LGRRFTIMSD+KALKFLLEQREVQPQFQKWLTKLLGYDFEILYQTGLQNKAADALSRVTTPSELN
Subjt:  AFFSQKLSMRAQNKSIYERELMAVVLAVQKWRHYLLGRRFTIMSDKKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQTGLQNKAADALSRVTTPSELN

Query:  IMTTLGIVDMETVTKEVEGDEELQKIVE
         MTT GI+DMETVTKEVEGDEELQKIVE
Subjt:  IMTTLGIVDMETVTKEVEGDEELQKIVE

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.61.4e-3542.27Show/hide
Query:  QWPQPTDITRLRGFLGLTRYYRRFVKGYGKIAAPLTKLLQNNSFKWD---DEATLAFEDLKLAMTIIPVLALSDWSLPFVVETDASGSWLGAVLSQNGHP
        ++P PT    ++ FLGLT YYR+F+  +  IA P+TK L+ N  K D    E   AF+ LK  ++  P+L + D++  F + TDAS   LGAVLSQ+GHP
Subjt:  QWPQPTDITRLRGFLGLTRYYRRFVKGYGKIAAPLTKLLQNNSFKWD---DEATLAFEDLKLAMTIIPVLALSDWSLPFVVETDASGSWLGAVLSQNGHP

Query:  IAFFSQKLSMRAQNKSIYERELMAVVLAVQKWRHYLLGRRFTIMSDKKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQTGLQNKAADALSRV
        +++ S+ L+    N S  E+EL+A+V A + +RHYLLGR F I SD + L +L   ++   +  +W  KL  +DF+I Y  G +N  ADALSR+
Subjt:  IAFFSQKLSMRAQNKSIYERELMAVVLAVQKWRHYLLGRRFTIMSDKKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQTGLQNKAADALSRV

P0CT41 Transposon Tf2-12 polyprotein5.9e-2631.33Show/hide
Query:  MVQWPQPTDITRLRGFLGLTRYYRRFVKGYGKIAAPLTKLLQNN-SFKWDDEATLAFEDLKLAMTIIPVLALSDWSLPFVVETDASGSWLGAVLSQNG--
        ++QW QP +   LR FLG   Y R+F+    ++  PL  LL+ +  +KW    T A E++K  +   PVL   D+S   ++ETDAS   +GAVLSQ    
Subjt:  MVQWPQPTDITRLRGFLGLTRYYRRFVKGYGKIAAPLTKLLQNN-SFKWDDEATLAFEDLKLAMTIIPVLALSDWSLPFVVETDASGSWLGAVLSQNG--

Query:  ---HPIAFFSQKLSMRAQNKSIYERELMAVVLAVQKWRHYLLG--RRFTIMSDKKAL--KFLLEQREVQPQFQKWLTKLLGYDFEILYQTGLQNKAADAL
           +P+ ++S K+S    N S+ ++E++A++ +++ WRHYL      F I++D + L  +   E      +  +W   L  ++FEI Y+ G  N  ADAL
Subjt:  ---HPIAFFSQKLSMRAQNKSIYERELMAVVLAVQKWRHYLLG--RRFTIMSDKKAL--KFLLEQREVQPQFQKWLTKLLGYDFEILYQTGLQNKAADAL

Query:  SRVTTPSE----------LNIMTTLGIVD--METVTKEVEGDEELQKIV
        SR+   +E          +N +  + I D     V  E   D +L  ++
Subjt:  SRVTTPSE----------LNIMTTLGIVD--METVTKEVEGDEELQKIV

P20825 Retrovirus-related Pol polyprotein from transposon 2971.1e-3745.41Show/hide
Query:  MVQWPQPTDITRLRGFLGLTRYYRRFVKGYGKIAAPLTKLLQNNSFKWDD---EATLAFEDLKLAMTIIPVLALSDWSLPFVVETDASGSWLGAVLSQNG
        +V +P PT    +R FLGLT YYR+F+  Y  IA P+T  L+  + K D    E   AFE LK  +   P+L L D+   FV+ TDAS   LGAVLSQNG
Subjt:  MVQWPQPTDITRLRGFLGLTRYYRRFVKGYGKIAAPLTKLLQNNSFKWDD---EATLAFEDLKLAMTIIPVLALSDWSLPFVVETDASGSWLGAVLSQNG

Query:  HPIAFFSQKLSMRAQNKSIYERELMAVVLAVQKWRHYLLGRRFTIMSDKKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQTGLQNKAADALSRV
        HPI+F S+ L+    N S  E+EL+A+V A + +RHYLLGR+F I SD + L++L   +E   + ++W  +L  Y F+I Y  G +N  ADALSR+
Subjt:  HPIAFFSQKLSMRAQNKSIYERELMAVVLAVQKWRHYLLGRRFTIMSDKKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQTGLQNKAADALSRV

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus6.3e-2834.25Show/hide
Query:  QWPQPTDITRLRGFLGLTRYYRRFVKGYGKIAAPLTKLLQ--------NNSFK----WDDEATLAFEDLKLAMTIIPVLALSDWSLPFVVETDASGSWLG
        + P PT +  L+ FLG+T YYR+F++ Y K+A PLT L +        + S K     D+ A  +F DLK  +    +LA   ++ PF + TDAS   +G
Subjt:  QWPQPTDITRLRGFLGLTRYYRRFVKGYGKIAAPLTKLLQ--------NNSFK----WDDEATLAFEDLKLAMTIIPVLALSDWSLPFVVETDASGSWLG

Query:  AVLSQN----GHPIAFFSQKLSMRAQNKSIYERELMAVVLAVQKWRHYLLGR-RFTIMSDKKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQTGLQNK
        AVLSQ+      PIA+ S+ L+   +N +  E+E++A++ ++   R YL G     + +D + L F L  R    + ++W  ++  Y+ E++Y+ G  N 
Subjt:  AVLSQN----GHPIAFFSQKLSMRAQNKSIYERELMAVVLAVQKWRHYLLGR-RFTIMSDKKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQTGLQNK

Query:  AADALSRVTTPSELNIMTT
         ADALSR+  P +LN ++T
Subjt:  AADALSRVTTPSELNIMTT

Q9UR07 Transposon Tf2-11 polyprotein5.9e-2631.33Show/hide
Query:  MVQWPQPTDITRLRGFLGLTRYYRRFVKGYGKIAAPLTKLLQNN-SFKWDDEATLAFEDLKLAMTIIPVLALSDWSLPFVVETDASGSWLGAVLSQNG--
        ++QW QP +   LR FLG   Y R+F+    ++  PL  LL+ +  +KW    T A E++K  +   PVL   D+S   ++ETDAS   +GAVLSQ    
Subjt:  MVQWPQPTDITRLRGFLGLTRYYRRFVKGYGKIAAPLTKLLQNN-SFKWDDEATLAFEDLKLAMTIIPVLALSDWSLPFVVETDASGSWLGAVLSQNG--

Query:  ---HPIAFFSQKLSMRAQNKSIYERELMAVVLAVQKWRHYLLG--RRFTIMSDKKAL--KFLLEQREVQPQFQKWLTKLLGYDFEILYQTGLQNKAADAL
           +P+ ++S K+S    N S+ ++E++A++ +++ WRHYL      F I++D + L  +   E      +  +W   L  ++FEI Y+ G  N  ADAL
Subjt:  ---HPIAFFSQKLSMRAQNKSIYERELMAVVLAVQKWRHYLLG--RRFTIMSDKKAL--KFLLEQREVQPQFQKWLTKLLGYDFEILYQTGLQNKAADAL

Query:  SRVTTPSE----------LNIMTTLGIVD--METVTKEVEGDEELQKIV
        SR+   +E          +N +  + I D     V  E   D +L  ++
Subjt:  SRVTTPSE----------LNIMTTLGIVD--METVTKEVEGDEELQKIV

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein2.5e-2461.36Show/hide
Query:  MVQWPQPTDITRLRGFLGLTRYYRRFVKGYGKIAAPLTKLLQNNSFKWDDEATLAFEDLKLAMTIIPVLALSDWSLPFVVETDASGSW
        MV WP+P + T LRGFLGLT YYRRFVK YGKI  PLT+LL+ NS KW + A LAF+ LK A+T +PVLAL D  LPFV      G W
Subjt:  MVQWPQPTDITRLRGFLGLTRYYRRFVKGYGKIAAPLTKLLQNNSFKWDDEATLAFEDLKLAMTIIPVLALSDWSLPFVVETDASGSW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTACAATGGCCACAACCTACTGACATCACGAGATTAAGGGGATTCCTAGGGTTGACTAGATATTACCGACGATTTGTCAAAGGATATGGGAAAATCGCAGCTCCCTT
AACTAAACTATTGCAGAACAACTCGTTTAAGTGGGATGACGAAGCCACTCTAGCATTTGAAGACCTTAAACTGGCCATGACCATAATCCCCGTGCTAGCCCTATCGGATT
GGTCCCTGCCTTTTGTGGTCGAAACCGATGCATCAGGAAGCTGGTTGGGCGCAGTTCTATCACAAAATGGCCATCCTATAGCTTTCTTTAGCCAAAAGTTGTCTATGAGG
GCGCAAAATAAGTCAATTTATGAACGGGAACTTATGGCTGTCGTCCTAGCTGTGCAGAAATGGAGGCATTATCTTTTGGGGAGGAGATTTACAATTATGTCAGATAAAAA
AGCCTTAAAGTTTTTGTTGGAGCAAAGGGAGGTTCAACCACAGTTTCAAAAATGGTTAACCAAGCTACTGGGCTATGACTTTGAAATATTGTATCAAACAGGGCTACAAA
ACAAGGCTGCTGATGCTCTTTCAAGAGTAACCACCCCTTCTGAACTGAACATAATGACTACATTAGGAATCGTGGATATGGAAACCGTGACCAAGGAGGTTGAGGGGGAT
GAGGAACTACAGAAAATTGTAGAACAGCTACAGAGTGGGAACCCAAGCGAAGGAAGTTATACGTGGGAAAATGGAAGGTGCTTTATAAAGGAAGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTACAATGGCCACAACCTACTGACATCACGAGATTAAGGGGATTCCTAGGGTTGACTAGATATTACCGACGATTTGTCAAAGGATATGGGAAAATCGCAGCTCCCTT
AACTAAACTATTGCAGAACAACTCGTTTAAGTGGGATGACGAAGCCACTCTAGCATTTGAAGACCTTAAACTGGCCATGACCATAATCCCCGTGCTAGCCCTATCGGATT
GGTCCCTGCCTTTTGTGGTCGAAACCGATGCATCAGGAAGCTGGTTGGGCGCAGTTCTATCACAAAATGGCCATCCTATAGCTTTCTTTAGCCAAAAGTTGTCTATGAGG
GCGCAAAATAAGTCAATTTATGAACGGGAACTTATGGCTGTCGTCCTAGCTGTGCAGAAATGGAGGCATTATCTTTTGGGGAGGAGATTTACAATTATGTCAGATAAAAA
AGCCTTAAAGTTTTTGTTGGAGCAAAGGGAGGTTCAACCACAGTTTCAAAAATGGTTAACCAAGCTACTGGGCTATGACTTTGAAATATTGTATCAAACAGGGCTACAAA
ACAAGGCTGCTGATGCTCTTTCAAGAGTAACCACCCCTTCTGAACTGAACATAATGACTACATTAGGAATCGTGGATATGGAAACCGTGACCAAGGAGGTTGAGGGGGAT
GAGGAACTACAGAAAATTGTAGAACAGCTACAGAGTGGGAACCCAAGCGAAGGAAGTTATACGTGGGAAAATGGAAGGTGCTTTATAAAGGAAGAATAG
Protein sequenceShow/hide protein sequence
MVQWPQPTDITRLRGFLGLTRYYRRFVKGYGKIAAPLTKLLQNNSFKWDDEATLAFEDLKLAMTIIPVLALSDWSLPFVVETDASGSWLGAVLSQNGHPIAFFSQKLSMR
AQNKSIYERELMAVVLAVQKWRHYLLGRRFTIMSDKKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQTGLQNKAADALSRVTTPSELNIMTTLGIVDMETVTKEVEGD
EELQKIVEQLQSGNPSEGSYTWENGRCFIKEE