| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0032248.1 pol protein [Cucumis melo var. makuwa] | 5.6e-195 | 83.69 | Show/hide |
Query: MAPTEPKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVRDSDIPK
MAP E KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN YPLPRIDDLFDQLQGATVFSKIDL SGYHQLR+RD DIPK
Subjt: MAPTEPKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVRDSDIPK
Query: TAFRSRYGYYEFIVMSFGLTNAPAVFMDLMNMVFKDFLDSFIIVFIDDILIYSKTEAEHEEHLHQVLETLRSNKLYAKFSKCEFWLKKVTFLGHVVSSEG
TAFRSRYG+YEF+VMSFGLTNAPAVFMDLMN VFKDFLDSF+IVFIDDILIYSKTEAEHEEHLHQVL+TLR+NKLYAKFSKCEFWL+KVTFLGHVVSSEG
Subjt: TAFRSRYGYYEFIVMSFGLTNAPAVFMDLMNMVFKDFLDSFIIVFIDDILIYSKTEAEHEEHLHQVLETLRSNKLYAKFSKCEFWLKKVTFLGHVVSSEG
Query: VSVDPAKIEAVTNWPRRL--------------------------------------------RFVIYSDASKKGLGCVLMQQGKVVVYASRQLKSHEQNY
VSVDPAKIEAVTNWPR FVIYSDASKKGLGCVLMQQGKVV YASRQLK HEQNY
Subjt: VSVDPAKIEAVTNWPRRL--------------------------------------------RFVIYSDASKKGLGCVLMQQGKVVVYASRQLKSHEQNY
Query: PTHDLELATVVFALKIWRHYLYSEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSKKVAHSAAFITKQAPLLRDFERA
PTHDLELA VVFALKIWRHYLY EKIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYH GKANVVADALS+KVAHSAA ITKQ PLLRDFERA
Subjt: PTHDLELATVVFALKIWRHYLYSEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSKKVAHSAAFITKQAPLLRDFERA
Query: EIAVSVGEVTSQLAQLSVQPTLR
EIAVSVGEVTSQLAQLSVQPTLR
Subjt: EIAVSVGEVTSQLAQLSVQPTLR
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| KAA0032541.1 pol protein [Cucumis melo var. makuwa] | 4.7e-194 | 79.69 | Show/hide |
Query: MAPTEPKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVRDSDIPK
MAP E KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLR+RD DIPK
Subjt: MAPTEPKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVRDSDIPK
Query: TAFRSRYGYYEFIVMSFGLTNAPAVFMDLMNMVFKDFLDSFIIVFIDDILIYSKTEAEHEEHLHQVLETLRSNKLYAKFSKCEFWLKKVTFLGHVVSSEG
TAFRSRYG+Y+F+VMSFGLTNAPAVFMDLMN VFKDFLDSF+IVFIDDILIYSKTEAEHEEHLHQVLETLR+NKLYAKFSKCEFWL+KVTFLGHVVSSEG
Subjt: TAFRSRYGYYEFIVMSFGLTNAPAVFMDLMNMVFKDFLDSFIIVFIDDILIYSKTEAEHEEHLHQVLETLRSNKLYAKFSKCEFWLKKVTFLGHVVSSEG
Query: VSVDPAKIEAVTNWPR-------------------------RL--------------------------------------------RFVIYSDASKKGL
VSVDPAKIEAVTNWPR R+ FVIYSDASKKGL
Subjt: VSVDPAKIEAVTNWPR-------------------------RL--------------------------------------------RFVIYSDASKKGL
Query: GCVLMQQGKVVVYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYSEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADA
GCVLMQQGKVV YASRQLK HEQNYPTHDLELA VVFALKIWRHYLYSEKIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYH GKANVVADA
Subjt: GCVLMQQGKVVVYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYSEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADA
Query: LSKKVAHSAAFITKQAPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLR
LS+KVAHSAA ITKQ PLLRDFERAEIAVSVGEVT+QLAQLSVQPTLR
Subjt: LSKKVAHSAAFITKQAPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLR
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| KAA0045284.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 2.5e-203 | 93.33 | Show/hide |
Query: MAPTEPKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVRDSDIPK
MAPTEPKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVRDSDIPK
Subjt: MAPTEPKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVRDSDIPK
Query: TAFRSRYGYYEFIVMSFGLTNAPAVFMDLMNMVFKDFLDSFIIVFIDDILIYSKTEAEHEEHLHQVLETLRSNKLYAKFSKCEFWLKKVTFLGHVVSSEG
TAFRSRYGYYEFIVMSFGLTNAPAVFMDLMNMVFKDFLDSFIIVFIDDILIYSKTEAEHEEHLHQVLETLRSNKLYAKFSKCEFWLKKVTFLGHVVSSEG
Subjt: TAFRSRYGYYEFIVMSFGLTNAPAVFMDLMNMVFKDFLDSFIIVFIDDILIYSKTEAEHEEHLHQVLETLRSNKLYAKFSKCEFWLKKVTFLGHVVSSEG
Query: VSVDPAKIEAVTNWPRRLR-------------------------FVIYSDASKKGLGCVLMQQGKVVVYASRQLKSHEQNYPTHDLELATVVFALKIWRH
VSVDPAKIEAVTNWPRRLR FVIYSDASKKGLGCVLMQQGKVVVYASRQLKSHEQNYPTHDLELATVVFALKIWRH
Subjt: VSVDPAKIEAVTNWPRRLR-------------------------FVIYSDASKKGLGCVLMQQGKVVVYASRQLKSHEQNYPTHDLELATVVFALKIWRH
Query: YLYSEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSKKVAHSAAFITKQAPLLRDFERAEIAVSVGEV
YLYSEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSKKVAHSAAFITKQAPLLRDFERAEIAVSVGE+
Subjt: YLYSEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSKKVAHSAAFITKQAPLLRDFERAEIAVSVGEV
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| KAA0065652.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 2.5e-195 | 83.69 | Show/hide |
Query: MAPTEPKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVRDSDIPK
MAP E KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLR+RD DIPK
Subjt: MAPTEPKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVRDSDIPK
Query: TAFRSRYGYYEFIVMSFGLTNAPAVFMDLMNMVFKDFLDSFIIVFIDDILIYSKTEAEHEEHLHQVLETLRSNKLYAKFSKCEFWLKKVTFLGHVVSSEG
TAFRSRYG+YEF+VMSFGLTNAPAVFMDLMN VFKDFLDSFIIVFIDDILIYSKTEAEHEEHLHQVLETLR+NKLYAKFSKCEFWL+KV FLGHVVS EG
Subjt: TAFRSRYGYYEFIVMSFGLTNAPAVFMDLMNMVFKDFLDSFIIVFIDDILIYSKTEAEHEEHLHQVLETLRSNKLYAKFSKCEFWLKKVTFLGHVVSSEG
Query: VSVDPAKIEAVTNWPRRL--------------------------------------------RFVIYSDASKKGLGCVLMQQGKVVVYASRQLKSHEQNY
VSVDPAKIEAVTNWPR FVIYSDASKKGLGCVLMQQGKVV YASRQLK HEQNY
Subjt: VSVDPAKIEAVTNWPRRL--------------------------------------------RFVIYSDASKKGLGCVLMQQGKVVVYASRQLKSHEQNY
Query: PTHDLELATVVFALKIWRHYLYSEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSKKVAHSAAFITKQAPLLRDFERA
PTHDLELA VVFALKIWRHYLY EKIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYH GKANVVADALS+KVAHSAA ITKQ PLLRDFERA
Subjt: PTHDLELATVVFALKIWRHYLYSEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSKKVAHSAAFITKQAPLLRDFERA
Query: EIAVSVGEVTSQLAQLSVQPTLR
EIAVSVGEVT+QLAQLSVQP LR
Subjt: EIAVSVGEVTSQLAQLSVQPTLR
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| KAA0066451.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.6e-194 | 86.53 | Show/hide |
Query: MAPTEPKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVRDSDIPK
MAP E KELKVQLQELLDKGFIRP+VSPWGAPVLF KK DGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLR+RDSDIPK
Subjt: MAPTEPKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVRDSDIPK
Query: TAFRSRYGYYEFIVMSFGLTNAPAVFMDLMNMVFKDFLDSFIIVFIDDILIYSKTEAEHEEHLHQVLETLRSNKLYAKFSKCEFWLKKVTFLGHVVSSEG
AFRSRYG+Y+FIVMSFGLTNAPAVFMDLMN VFKDFLDSF+IVFIDDILIYSKTEAEHEEHLHQVLETLR+NKLYAKFSKCEFW++KVTFLGHVVSSEG
Subjt: TAFRSRYGYYEFIVMSFGLTNAPAVFMDLMNMVFKDFLDSFIIVFIDDILIYSKTEAEHEEHLHQVLETLRSNKLYAKFSKCEFWLKKVTFLGHVVSSEG
Query: VSVDPAKIEAVTNWPRRL----------------------RFVIYSDASKKGLGCVLMQQGKVVVYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLY
VSVDPAKIEA+TNWPR +FVIYSDAS+KGLGCVLMQQGKVV YA RQLKSHEQNYPTHDLELA VVFALKIWRHYLY
Subjt: VSVDPAKIEAVTNWPRRL----------------------RFVIYSDASKKGLGCVLMQQGKVVVYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLY
Query: SEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSKKVAHSAAFITKQAPLLRDFERAEIAVSVGEVTSQLAQLSVQPTL
EKIQI+TDHKS KYFFTQKELNMRQRRWLELVKDYDCEILYH GKANVVAD LS+KVAHSAA ITKQ PLL DFER EIAVSVGEVTSQLAQLSVQPTL
Subjt: SEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSKKVAHSAAFITKQAPLLRDFERAEIAVSVGEVTSQLAQLSVQPTL
Query: R
R
Subjt: R
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SNR3 Reverse transcriptase | 2.7e-195 | 83.69 | Show/hide |
Query: MAPTEPKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVRDSDIPK
MAP E KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN YPLPRIDDLFDQLQGATVFSKIDL SGYHQLR+RD DIPK
Subjt: MAPTEPKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVRDSDIPK
Query: TAFRSRYGYYEFIVMSFGLTNAPAVFMDLMNMVFKDFLDSFIIVFIDDILIYSKTEAEHEEHLHQVLETLRSNKLYAKFSKCEFWLKKVTFLGHVVSSEG
TAFRSRYG+YEF+VMSFGLTNAPAVFMDLMN VFKDFLDSF+IVFIDDILIYSKTEAEHEEHLHQVL+TLR+NKLYAKFSKCEFWL+KVTFLGHVVSSEG
Subjt: TAFRSRYGYYEFIVMSFGLTNAPAVFMDLMNMVFKDFLDSFIIVFIDDILIYSKTEAEHEEHLHQVLETLRSNKLYAKFSKCEFWLKKVTFLGHVVSSEG
Query: VSVDPAKIEAVTNWPRRL--------------------------------------------RFVIYSDASKKGLGCVLMQQGKVVVYASRQLKSHEQNY
VSVDPAKIEAVTNWPR FVIYSDASKKGLGCVLMQQGKVV YASRQLK HEQNY
Subjt: VSVDPAKIEAVTNWPRRL--------------------------------------------RFVIYSDASKKGLGCVLMQQGKVVVYASRQLKSHEQNY
Query: PTHDLELATVVFALKIWRHYLYSEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSKKVAHSAAFITKQAPLLRDFERA
PTHDLELA VVFALKIWRHYLY EKIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYH GKANVVADALS+KVAHSAA ITKQ PLLRDFERA
Subjt: PTHDLELATVVFALKIWRHYLYSEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSKKVAHSAAFITKQAPLLRDFERA
Query: EIAVSVGEVTSQLAQLSVQPTLR
EIAVSVGEVTSQLAQLSVQPTLR
Subjt: EIAVSVGEVTSQLAQLSVQPTLR
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| A0A5A7SSL3 Reverse transcriptase | 2.3e-194 | 79.69 | Show/hide |
Query: MAPTEPKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVRDSDIPK
MAP E KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLR+RD DIPK
Subjt: MAPTEPKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVRDSDIPK
Query: TAFRSRYGYYEFIVMSFGLTNAPAVFMDLMNMVFKDFLDSFIIVFIDDILIYSKTEAEHEEHLHQVLETLRSNKLYAKFSKCEFWLKKVTFLGHVVSSEG
TAFRSRYG+Y+F+VMSFGLTNAPAVFMDLMN VFKDFLDSF+IVFIDDILIYSKTEAEHEEHLHQVLETLR+NKLYAKFSKCEFWL+KVTFLGHVVSSEG
Subjt: TAFRSRYGYYEFIVMSFGLTNAPAVFMDLMNMVFKDFLDSFIIVFIDDILIYSKTEAEHEEHLHQVLETLRSNKLYAKFSKCEFWLKKVTFLGHVVSSEG
Query: VSVDPAKIEAVTNWPR-------------------------RL--------------------------------------------RFVIYSDASKKGL
VSVDPAKIEAVTNWPR R+ FVIYSDASKKGL
Subjt: VSVDPAKIEAVTNWPR-------------------------RL--------------------------------------------RFVIYSDASKKGL
Query: GCVLMQQGKVVVYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYSEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADA
GCVLMQQGKVV YASRQLK HEQNYPTHDLELA VVFALKIWRHYLYSEKIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYH GKANVVADA
Subjt: GCVLMQQGKVVVYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYSEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADA
Query: LSKKVAHSAAFITKQAPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLR
LS+KVAHSAA ITKQ PLLRDFERAEIAVSVGEVT+QLAQLSVQPTLR
Subjt: LSKKVAHSAAFITKQAPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLR
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| A0A5A7TQ85 Reverse transcriptase | 1.2e-203 | 93.33 | Show/hide |
Query: MAPTEPKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVRDSDIPK
MAPTEPKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVRDSDIPK
Subjt: MAPTEPKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVRDSDIPK
Query: TAFRSRYGYYEFIVMSFGLTNAPAVFMDLMNMVFKDFLDSFIIVFIDDILIYSKTEAEHEEHLHQVLETLRSNKLYAKFSKCEFWLKKVTFLGHVVSSEG
TAFRSRYGYYEFIVMSFGLTNAPAVFMDLMNMVFKDFLDSFIIVFIDDILIYSKTEAEHEEHLHQVLETLRSNKLYAKFSKCEFWLKKVTFLGHVVSSEG
Subjt: TAFRSRYGYYEFIVMSFGLTNAPAVFMDLMNMVFKDFLDSFIIVFIDDILIYSKTEAEHEEHLHQVLETLRSNKLYAKFSKCEFWLKKVTFLGHVVSSEG
Query: VSVDPAKIEAVTNWPRRLR-------------------------FVIYSDASKKGLGCVLMQQGKVVVYASRQLKSHEQNYPTHDLELATVVFALKIWRH
VSVDPAKIEAVTNWPRRLR FVIYSDASKKGLGCVLMQQGKVVVYASRQLKSHEQNYPTHDLELATVVFALKIWRH
Subjt: VSVDPAKIEAVTNWPRRLR-------------------------FVIYSDASKKGLGCVLMQQGKVVVYASRQLKSHEQNYPTHDLELATVVFALKIWRH
Query: YLYSEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSKKVAHSAAFITKQAPLLRDFERAEIAVSVGEV
YLYSEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSKKVAHSAAFITKQAPLLRDFERAEIAVSVGE+
Subjt: YLYSEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSKKVAHSAAFITKQAPLLRDFERAEIAVSVGEV
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| A0A5A7VBI7 Reverse transcriptase | 1.2e-195 | 83.69 | Show/hide |
Query: MAPTEPKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVRDSDIPK
MAP E KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLR+RD DIPK
Subjt: MAPTEPKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVRDSDIPK
Query: TAFRSRYGYYEFIVMSFGLTNAPAVFMDLMNMVFKDFLDSFIIVFIDDILIYSKTEAEHEEHLHQVLETLRSNKLYAKFSKCEFWLKKVTFLGHVVSSEG
TAFRSRYG+YEF+VMSFGLTNAPAVFMDLMN VFKDFLDSFIIVFIDDILIYSKTEAEHEEHLHQVLETLR+NKLYAKFSKCEFWL+KV FLGHVVS EG
Subjt: TAFRSRYGYYEFIVMSFGLTNAPAVFMDLMNMVFKDFLDSFIIVFIDDILIYSKTEAEHEEHLHQVLETLRSNKLYAKFSKCEFWLKKVTFLGHVVSSEG
Query: VSVDPAKIEAVTNWPRRL--------------------------------------------RFVIYSDASKKGLGCVLMQQGKVVVYASRQLKSHEQNY
VSVDPAKIEAVTNWPR FVIYSDASKKGLGCVLMQQGKVV YASRQLK HEQNY
Subjt: VSVDPAKIEAVTNWPRRL--------------------------------------------RFVIYSDASKKGLGCVLMQQGKVVVYASRQLKSHEQNY
Query: PTHDLELATVVFALKIWRHYLYSEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSKKVAHSAAFITKQAPLLRDFERA
PTHDLELA VVFALKIWRHYLY EKIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYH GKANVVADALS+KVAHSAA ITKQ PLLRDFERA
Subjt: PTHDLELATVVFALKIWRHYLYSEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSKKVAHSAAFITKQAPLLRDFERA
Query: EIAVSVGEVTSQLAQLSVQPTLR
EIAVSVGEVT+QLAQLSVQP LR
Subjt: EIAVSVGEVTSQLAQLSVQPTLR
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| A0A5A7VLF2 Reverse transcriptase | 7.9e-195 | 86.53 | Show/hide |
Query: MAPTEPKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVRDSDIPK
MAP E KELKVQLQELLDKGFIRP+VSPWGAPVLF KK DGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLR+RDSDIPK
Subjt: MAPTEPKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVRDSDIPK
Query: TAFRSRYGYYEFIVMSFGLTNAPAVFMDLMNMVFKDFLDSFIIVFIDDILIYSKTEAEHEEHLHQVLETLRSNKLYAKFSKCEFWLKKVTFLGHVVSSEG
AFRSRYG+Y+FIVMSFGLTNAPAVFMDLMN VFKDFLDSF+IVFIDDILIYSKTEAEHEEHLHQVLETLR+NKLYAKFSKCEFW++KVTFLGHVVSSEG
Subjt: TAFRSRYGYYEFIVMSFGLTNAPAVFMDLMNMVFKDFLDSFIIVFIDDILIYSKTEAEHEEHLHQVLETLRSNKLYAKFSKCEFWLKKVTFLGHVVSSEG
Query: VSVDPAKIEAVTNWPRRL----------------------RFVIYSDASKKGLGCVLMQQGKVVVYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLY
VSVDPAKIEA+TNWPR +FVIYSDAS+KGLGCVLMQQGKVV YA RQLKSHEQNYPTHDLELA VVFALKIWRHYLY
Subjt: VSVDPAKIEAVTNWPRRL----------------------RFVIYSDASKKGLGCVLMQQGKVVVYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLY
Query: SEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSKKVAHSAAFITKQAPLLRDFERAEIAVSVGEVTSQLAQLSVQPTL
EKIQI+TDHKS KYFFTQKELNMRQRRWLELVKDYDCEILYH GKANVVAD LS+KVAHSAA ITKQ PLL DFER EIAVSVGEVTSQLAQLSVQPTL
Subjt: SEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSKKVAHSAAFITKQAPLLRDFERAEIAVSVGEVTSQLAQLSVQPTL
Query: R
R
Subjt: R
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| SwissProt top hits | e value | %identity | Alignment |
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| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 1.3e-61 | 33.25 | Show/hide |
Query: KELKVQLQELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVRDSDIPKT
+E++ Q+Q++L++G IR S SP+ +P+ V KK+D S R+ IDYR+LN++TV +R+P+P +D++ +L F+ IDL G+HQ+ + + KT
Subjt: KELKVQLQELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVRDSDIPKT
Query: AFRSRYGYYEFIVMSFGLTNAPAVFMDLMNMVFKDFLDSFIIVFIDDILIYSKTEAEHEEHLHQVLETLRSNKLYAKFSKCEFWLKKVTFLGHVVSSEGV
AF +++G+YE++ M FGL NAPA F MN + + L+ +V++DDI+++S + EH + L V E L L + KCEF ++ TFLGHV++ +G+
Subjt: AFRSRYGYYEFIVMSFGLTNAPAVFMDLMNMVFKDFLDSFIIVFIDDILIYSKTEAEHEEHLHQVLETLRSNKLYAKFSKCEFWLKKVTFLGHVVSSEGV
Query: SVDPAKIEAVTNWP-----------------------------------------------------RRL-----------------RFVIYSDASKKGL
+P KIEA+ +P ++L +F + +DAS L
Subjt: SVDPAKIEAVTNWP-----------------------------------------------------RRL-----------------RFVIYSDASKKGL
Query: GCVLMQQGKVVVYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYSEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADA
G VL Q G + Y SR L HE NY T + EL +V+A K +RHYL +I +DH+ L + + K+ N + RW + ++D +I Y GK N VADA
Subjt: GCVLMQQGKVVVYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYSEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADA
Query: LSK
LS+
Subjt: LSK
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| P10401 Retrovirus-related Pol polyprotein from transposon gypsy | 8.5e-53 | 30.34 | Show/hide |
Query: QLQELLDKGFIRPSVSPWGAPVLFVKKK------DGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVRDSDIPKTAFRS
++++LL G IRPS SP+ +P V KK + + RL ID+R+LN+ T+ +RYP+P I + L A F+ +DL+SGYHQ+ + + D KT+F
Subjt: QLQELLDKGFIRPSVSPWGAPVLFVKKK------DGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVRDSDIPKTAFRS
Query: RYGYYEFIVMSFGLTNAPAVFMDLMNMVFKDFLDSFIIVFIDDILIYSKTEAEHEEHLHQVLETLRSNKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDP
G YEF + FGL NA ++F ++ V ++ + V++DD++I+S+ E++H H+ VL+ L + K F+ + V +LG +VS +G DP
Subjt: RYGYYEFIVMSFGLTNAPAVFMDLMNMVFKDFLDSFIIVFIDDILIYSKTEAEHEEHLHQVLETLRSNKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDP
Query: AKIEAVTNWP---------------------------------------------------------------RRLR------------------FVIYS
K++A+ +P +RLR F + +
Subjt: AKIEAVTNWP---------------------------------------------------------------RRLR------------------FVIYS
Query: DASKKGLGCVLMQQGKVVVYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLY-SEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLG
DAS G+G VL Q+G+ + SR LK EQNY T++ EL +V+AL +++LY S +I IFTDH+ L + + N + +RW + ++ ++ Y G
Subjt: DASKKGLGCVLMQQGKVVVYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLY-SEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLG
Query: KANVVADALSKK
K N VADALS++
Subjt: KANVVADALSKK
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 1.6e-59 | 32.27 | Show/hide |
Query: MAPTEPKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVRD
+A T E++ Q+QE+L++G IR S SP+ +P V KK R+ IDYR+LN++T+ +RYP+P +D++ +L F+ IDL G+HQ+ + +
Subjt: MAPTEPKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVRD
Query: SDIPKTAFRSRYGYYEFIVMSFGLTNAPAVFMDLMNMVFKDFLDSFIIVFIDDILIYSKTEAEHEEHLHQVLETLRSNKLYAKFSKCEFWLKKVTFLGHV
I KTAF ++ G+YE++ M FGL NAPA F MN + + L+ +V++DDI+I+S + EH + V L L + KCEF K+ FLGH+
Subjt: SDIPKTAFRSRYGYYEFIVMSFGLTNAPAVFMDLMNMVFKDFLDSFIIVFIDDILIYSKTEAEHEEHLHQVLETLRSNKLYAKFSKCEFWLKKVTFLGHV
Query: VSSEGVSVDPAKIEAVTNWP--------------------------------------------RRL--------------------------RFVIYSD
V+ +G+ +P K++A+ ++P ++L +FV+ +D
Subjt: VSSEGVSVDPAKIEAVTNWP--------------------------------------------RRL--------------------------RFVIYSD
Query: ASKKGLGCVLMQQGKVVVYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYSEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKA
AS LG VL Q G + + SR L HE NY + EL +V+A K +RHYL + I +DH+ L++ KE + RW + +Y +I Y GK
Subjt: ASKKGLGCVLMQQGKVVVYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYSEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKA
Query: NVVADALSK
N VADALS+
Subjt: NVVADALSK
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 1.2e-54 | 29.98 | Show/hide |
Query: ELKVQLQELLDKGFIRPSVSPWGAPVLFVKKK-----DGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVRDSDIPKTA
E++ Q+ ELL G IRPS SP+ +P+ V KK + R+ +D++ LN VT+ + YP+P I+ L A F+ +DL SG+HQ+ +++SDIPKTA
Subjt: ELKVQLQELLDKGFIRPSVSPWGAPVLFVKKK-----DGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVRDSDIPKTA
Query: FRSRYGYYEFIVMSFGLTNAPAVFMDLMNMVFKDFLDSFIIVFIDDILIYSKTEAEHEEHLHQVLETLRSNKLYAKFSKCEFWLKKVTFLGHVVSSEGVS
F + G YEF+ + FGL NAPA+F +++ + ++ + V+IDDI+++S+ H ++L VL +L L K F +V FLG++V+++G+
Subjt: FRSRYGYYEFIVMSFGLTNAPAVFMDLMNMVFKDFLDSFIIVFIDDILIYSKTEAEHEEHLHQVLETLRSNKLYAKFSKCEFWLKKVTFLGHVVSSEGVS
Query: VDPAKIEAVTNWP-----RRLR---------------------------------------------------------------------------FVI
DP K+ A++ P + L+ F +
Subjt: VDPAKIEAVTNWP-----RRLR---------------------------------------------------------------------------FVI
Query: YSDASKKGLGCVLMQ----QGKVVVYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLY-SEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCE
+DAS +G VL Q + + + Y SR L E+NY T + E+ ++++L R YLY + I+++TDH+ L + + N + +RW +++Y+CE
Subjt: YSDASKKGLGCVLMQ----QGKVVVYASRQLKSHEQNYPTHDLELATVVFALKIWRHYLY-SEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCE
Query: ILYHLGKANVVADALSK
++Y GK+NVVADALS+
Subjt: ILYHLGKANVVADALSK
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 1.4e-44 | 43.54 | Show/hide |
Query: KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVRDSDIPKTAFRSR
+E+ +Q+LLD FI PS SP +PV+ V KKDG+ RLC+DYR LNK T+ + +PLPRID+L ++ A +F+ +DL SGYHQ+ + D KTAF +
Subjt: KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVRDSDIPKTAFRSR
Query: YGYYEFIVMSFGLTNAPAVFMDLMNMVFKDFLDSFIIVFIDDILIYSKTEAEHEEHLHQVLETLRSNKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPA
G YE+ VM FGL NAP+ F M F+D F+ V++DDILI+S++ EH +HL VLE L++ L K KC+F ++ FLG+ + + ++
Subjt: YGYYEFIVMSFGLTNAPAVFMDLMNMVFKDFLDSFIIVFIDDILIYSKTEAEHEEHLHQVLETLRSNKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPA
Query: KIEAVTNWP
K A+ ++P
Subjt: KIEAVTNWP
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