; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc07g0194121 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc07g0194121
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationCMiso1.1chr07:16503783..16505240
RNA-Seq ExpressionCmc07g0194121
SyntenyCmc07g0194121
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055376.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]4.1e-24387.86Show/hide
Query:  MPDQRPINVRPYKYGHVQKEEIENLVAEMLQDGIIRPSHSPYSSPVLLVKKKDGGWRFCVDYRKLNQATVSDKFPIPVIEELLDELHGAAVFSKLDLKSG
        +PDQ+PINVRPYKYGH+QK EIE LVAEMLQDG+IRPS SPYSSPVLLVKKK+GGWRFCVDYRKLNQAT+SDKFPIPVIEELLDEL+GAAVFSKLDLKSG
Subjt:  MPDQRPINVRPYKYGHVQKEEIENLVAEMLQDGIIRPSHSPYSSPVLLVKKKDGGWRFCVDYRKLNQATVSDKFPIPVIEELLDELHGAAVFSKLDLKSG

Query:  YHQIRMK-EDIEKTAFRTHDGHYEFLVMPFGLTNAPATFKSLMNQVFKPFLRRCVLVFFDDILVYSNDISEHEKHLGMVFTVLRDNQLYANQKKCVFTHS
        YHQIRMK EDIEKTAFRTH+GHYEFLVMPFGLTNAPATF+SLMNQVFKPFLRRCVLVFF DILVYS DI+EHEKHLGMVF VLRDNQLYAN KKCVF HS
Subjt:  YHQIRMK-EDIEKTAFRTHDGHYEFLVMPFGLTNAPATFKSLMNQVFKPFLRRCVLVFFDDILVYSNDISEHEKHLGMVFTVLRDNQLYANQKKCVFTHS

Query:  KIQYLGHQISKKGVEADEEKIRNMVSWSRPSDVSELRRFLGLTDYYRRFVKGYSNIATTLTKLLQKNAFKWEEEAETAFVKLKVAMTTIPVLALPDWTLP
        KIQYLGHQISK GVEADE+KIR+MV+W RP DV+ELR FL LT YYRRFVKGYSNIAT LTKLLQKNAFKW E+AETAFV+LKVAMTTIPVLALPDW+LP
Subjt:  KIQYLGHQISKKGVEADEEKIRNMVSWSRPSDVSELRRFLGLTDYYRRFVKGYSNIATTLTKLLQKNAFKWEEEAETAFVKLKVAMTTIPVLALPDWTLP

Query:  FTIETDASDSGLGAVLSQRGHPIAFFSQKLSQRAQAKSIYERELMAVVLSVQKWRHYLLGRKFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIL
        FTIETDAS SGLGAVLSQRGHPIAF+SQKLSQRAQAKSIYERELMAVVLSVQ+WRHYLLGRKF+I+SDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIL
Subjt:  FTIETDASDSGLGAVLSQRGHPIAFFSQKLSQRAQAKSIYERELMAVVLSVQKWRHYLLGRKFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIL

Query:  YQSRLLNKAADALSRVDTRVELNEMTTSEIVDMNTVSEEVENDEELQQIVEKLKKEQEVGGKFEWKNGRLLYKGRLVLSQTSSLIP
        YQ   LNKAADALSRV+ ++EL+EMTTS IVD++ V EEV+ DE LQ+IV KLKKEQEV GKFEWKNGRLLYKGRLVL QTSSLIP
Subjt:  YQSRLLNKAADALSRVDTRVELNEMTTSEIVDMNTVSEEVENDEELQQIVEKLKKEQEVGGKFEWKNGRLLYKGRLVLSQTSSLIP

KAA0061073.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]5.8e-24588.27Show/hide
Query:  MPDQRPINVRPYKYGHVQKEEIENLVAEMLQDGIIRPSHSPYSSPVLLVKKKDGGWRFCVDYRKLNQATVSDKFPIPVIEELLDELHGAAVFSKLDLKSG
        +PDQ+PINVRPYKYGH+QK EIE LVAEMLQDG+IRPS SPYSSPVLLVKKKDGGWRFCVDYRKLNQAT+SDKFPIPVIEELLDEL+GAAVFSKLDLKSG
Subjt:  MPDQRPINVRPYKYGHVQKEEIENLVAEMLQDGIIRPSHSPYSSPVLLVKKKDGGWRFCVDYRKLNQATVSDKFPIPVIEELLDELHGAAVFSKLDLKSG

Query:  YHQIRMK-EDIEKTAFRTHDGHYEFLVMPFGLTNAPATFKSLMNQVFKPFLRRCVLVFFDDILVYSNDISEHEKHLGMVFTVLRDNQLYANQKKCVFTHS
        YHQIRMK ED+EKTAFRTH+GHYEFLVMPFGLTNAPATF+SLMNQVFKPFLRRCVLVFFDDILVYS DI E EKHLGMVF VLRDNQLYAN KKCVF HS
Subjt:  YHQIRMK-EDIEKTAFRTHDGHYEFLVMPFGLTNAPATFKSLMNQVFKPFLRRCVLVFFDDILVYSNDISEHEKHLGMVFTVLRDNQLYANQKKCVFTHS

Query:  KIQYLGHQISKKGVEADEEKIRNMVSWSRPSDVSELRRFLGLTDYYRRFVKGYSNIATTLTKLLQKNAFKWEEEAETAFVKLKVAMTTIPVLALPDWTLP
        KIQYLGHQISK GVEADE+KIR+MV+W RPSDV+ELR FLGLT YYRRFVKGYSNIAT LTKLLQKNAFKW E+AETAFV+LKVAMTTIPVLALPDW+LP
Subjt:  KIQYLGHQISKKGVEADEEKIRNMVSWSRPSDVSELRRFLGLTDYYRRFVKGYSNIATTLTKLLQKNAFKWEEEAETAFVKLKVAMTTIPVLALPDWTLP

Query:  FTIETDASDSGLGAVLSQRGHPIAFFSQKLSQRAQAKSIYERELMAVVLSVQKWRHYLLGRKFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIL
        FTIETDAS SGLGAVLSQRGHPIAF+SQKLSQRAQAKSIYERELMAVVLSVQ+WRHYLLGRKF+I+SDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIL
Subjt:  FTIETDASDSGLGAVLSQRGHPIAFFSQKLSQRAQAKSIYERELMAVVLSVQKWRHYLLGRKFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIL

Query:  YQSRLLNKAADALSRVDTRVELNEMTTSEIVDMNTVSEEVENDEELQQIVEKLKKEQEVGGKFEWKNGRLLYKGRLVLSQTSSLIP
        YQ   LNKAADALSRV+ ++EL+EMTTS IVD++ V EEV+ DE LQ+IV KLKKEQEV GKFEWKNGRLLYKGRLVL QTSSLIP
Subjt:  YQSRLLNKAADALSRVDTRVELNEMTTSEIVDMNTVSEEVENDEELQQIVEKLKKEQEVGGKFEWKNGRLLYKGRLVLSQTSSLIP

KAA0061367.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]1.6e-25598.69Show/hide
Query:  MLQDGIIRPSHSPYSSPVLLVKKKDGGWRFCVDYRKLNQATVSDKFPIPVIEELLDELHGAAVFSKLDLKSGYHQIRMKEDIEKTAFRTHDGHYEFLVMP
        MLQDGIIRPSHSPYSSPVLLVKKKDGGWRFCVDYRKLNQATVSDKFPIPVIEELLDELHGAAVFSKLDLKSGYHQIRMKEDIEKTAFRTHDGHYEFLVMP
Subjt:  MLQDGIIRPSHSPYSSPVLLVKKKDGGWRFCVDYRKLNQATVSDKFPIPVIEELLDELHGAAVFSKLDLKSGYHQIRMKEDIEKTAFRTHDGHYEFLVMP

Query:  FGLTNAPATFKSLMNQVFKPFLRRCVLVFFDDILVYSNDISEHEKHLGMVFTVLRDNQLYANQKKCVFTHSKIQYLGHQISKKGVEADEEKIRNMVSWSR
        FGLTNA ATFKSLMNQ FKPFLRRCVLVFFDDILVYSNDISEHEKHLGMVFTVLRDNQLYANQKKCVFTHSKIQYLGHQISKKGVEADEEKIRNMVSWSR
Subjt:  FGLTNAPATFKSLMNQVFKPFLRRCVLVFFDDILVYSNDISEHEKHLGMVFTVLRDNQLYANQKKCVFTHSKIQYLGHQISKKGVEADEEKIRNMVSWSR

Query:  PSDVSELRRFLGLTDYYRRFVKGYSNIATTLTKLLQKNAFKWEEEAETAFVKLKVAMTTIPVLALPDWTLPFTIETDASDSGLGAVLSQRGHPIAFFSQK
        PSDVSELRRFLGLTDYYRRFVKGYSNIATTLTKLLQKNAFKWEEE ETAFVKLKVAMTTIPVLALPDWTLPFTIETDASDSGLGAVLSQRGHPIAFFSQK
Subjt:  PSDVSELRRFLGLTDYYRRFVKGYSNIATTLTKLLQKNAFKWEEEAETAFVKLKVAMTTIPVLALPDWTLPFTIETDASDSGLGAVLSQRGHPIAFFSQK

Query:  LSQRAQAKSIYERELMAVVLSVQKWRHYLLGRKFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQSRLLNKAADALSRVDTRVELNEMTTSE
        LSQRAQAKSIYERELM VVLSVQKWRHYLLGRKFTIMSDQKA KFLLEQREVQPQFQKWLTKLLGYDFEILYQSRLLNKAADALSRVDTRVELNEMTTSE
Subjt:  LSQRAQAKSIYERELMAVVLSVQKWRHYLLGRKFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQSRLLNKAADALSRVDTRVELNEMTTSE

Query:  IVDMNTVSEEVENDEELQQIVEKLKKEQEVGGKFEWKNGRLLYKGRLVLSQTSSLIP
        IVDMNT+SEEVENDEELQQIVEKLKKEQEVGGKFEWKNGRLLYKGRLVLSQTSSLIP
Subjt:  IVDMNTVSEEVENDEELQQIVEKLKKEQEVGGKFEWKNGRLLYKGRLVLSQTSSLIP

TYK14439.1 uncharacterized protein E5676_scaffold186G00980 [Cucumis melo var. makuwa]3.9e-24994.04Show/hide
Query:  MPDQRPINVRPYKYGHVQKEEIENLVAEMLQDGIIRPSHSPYSSPVLLVKKKDGGWRFCVDYRKLNQATVSDKFPIPVIEELLDELHGAAVFSKLDLKSG
        MPDQRPINVRPYKYGHVQKEEIENLVAEMLQDGIIRPSHSPYSSPVLLVK+KDGGWRFCVDYRKLNQATVSDKFPIPVIEELLDELHGAAVFSKLDLKSG
Subjt:  MPDQRPINVRPYKYGHVQKEEIENLVAEMLQDGIIRPSHSPYSSPVLLVKKKDGGWRFCVDYRKLNQATVSDKFPIPVIEELLDELHGAAVFSKLDLKSG

Query:  YHQIRMK-EDIEKTAFRTHDGHYEFLVMPFGLTNAPATFKSLMNQVFKPFLRRCVLVFFDDILVYSNDISEHEKHLGMVFTVLRDNQLYANQKKCVFTHS
        YHQIRMK EDIEKTAFRTH+GHYEFLVMPFGLTNA ATF+SLMNQVFKPFLRRCVLVF  DILVYSNDISEHEKHLGMVF +LRDNQLYANQKKCVF HS
Subjt:  YHQIRMK-EDIEKTAFRTHDGHYEFLVMPFGLTNAPATFKSLMNQVFKPFLRRCVLVFFDDILVYSNDISEHEKHLGMVFTVLRDNQLYANQKKCVFTHS

Query:  KIQYLGHQISKKGVEADEEKIRNMVSWSRPSDVSELRRFLGLTDYYRRFVKGYSNIATTLTKLLQKNAFKWEEEAETAFVKLKVAMTTIPVLALPDWTLP
        KIQYLGH ISKKGVEADEEKI++MVSW RPSDVSELR FLGLT YYRRFVKGYS+IAT LTKLLQKNAFKWEEEAETAFVKLKVAMTTIPVLALPDWTLP
Subjt:  KIQYLGHQISKKGVEADEEKIRNMVSWSRPSDVSELRRFLGLTDYYRRFVKGYSNIATTLTKLLQKNAFKWEEEAETAFVKLKVAMTTIPVLALPDWTLP

Query:  FTIETDASDSGLGAVLSQRGHPIAFFSQKLSQRAQAKSIYERELMAVVLSVQKWRHYLLGRKFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIL
        FTIETDAS SGLGAVLSQRGHPIAFFSQKLSQRAQ KSIYERELM VVLSVQKWRHYLLGRKF IMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIL
Subjt:  FTIETDASDSGLGAVLSQRGHPIAFFSQKLSQRAQAKSIYERELMAVVLSVQKWRHYLLGRKFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIL

Query:  YQSRLLNKAADALSRVDTRVELNEMTTSEIVDMNTVSEEVENDEELQQIVEKLKKEQEVGGKFEWKNGRL
        YQ  LLNKAADALSRVDTRVELNEMTTS IVDMNTVSEEVENDEELQQI+EKLKKE EVGGKFEWKNG L
Subjt:  YQSRLLNKAADALSRVDTRVELNEMTTSEIVDMNTVSEEVENDEELQQIVEKLKKEQEVGGKFEWKNGRL

TYK14722.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]2.6e-25398.47Show/hide
Query:  MLQDGIIRPSHSPYSSPVLLVKKKDGGWRFCVDYRKLNQATVSDKFPIPVIEELLDELHGAAVFSKLDLKSGYHQIRMKEDIEKTAFRTHDGHYEFLVMP
        MLQDGIIRPSHSPYSSPVLLVKKKDGGWRFCVDYRKLNQATVSDKFPIPVIEELLDELHGAAVFSKLDLKSGYHQIRMKEDIEKTAFRTHDGH EFLVMP
Subjt:  MLQDGIIRPSHSPYSSPVLLVKKKDGGWRFCVDYRKLNQATVSDKFPIPVIEELLDELHGAAVFSKLDLKSGYHQIRMKEDIEKTAFRTHDGHYEFLVMP

Query:  FGLTNAPATFKSLMNQVFKPFLRRCVLVFFDDILVYSNDISEHEKHLGMVFTVLRDNQLYANQKKCVFTHSKIQYLGHQISKKGVEADEEKIRNMVSWSR
        FGLTNA ATFKSLMNQ FKPFLRRCVLVFFDDILVYSNDISEHEKHLGMVFTVLRDNQLYANQKKCVFTHSKIQYLGHQISKKGVEADEEKIRNMVSWSR
Subjt:  FGLTNAPATFKSLMNQVFKPFLRRCVLVFFDDILVYSNDISEHEKHLGMVFTVLRDNQLYANQKKCVFTHSKIQYLGHQISKKGVEADEEKIRNMVSWSR

Query:  PSDVSELRRFLGLTDYYRRFVKGYSNIATTLTKLLQKNAFKWEEEAETAFVKLKVAMTTIPVLALPDWTLPFTIETDASDSGLGAVLSQRGHPIAFFSQK
        PSDVSELRRFLGLTDYYRRFVKGYSNIATTLTKLLQKNAFKWEEE ETAFVKLKVAMTTIPVLALPDWTLPFTIETDASDSGLGAVLSQRGHPIAFFSQK
Subjt:  PSDVSELRRFLGLTDYYRRFVKGYSNIATTLTKLLQKNAFKWEEEAETAFVKLKVAMTTIPVLALPDWTLPFTIETDASDSGLGAVLSQRGHPIAFFSQK

Query:  LSQRAQAKSIYERELMAVVLSVQKWRHYLLGRKFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQSRLLNKAADALSRVDTRVELNEMTTSE
        LSQRAQAKSIYERELM VVLSVQKWRHYLLGRKFTIMSDQKA KFLLEQREVQPQFQKWLTKLLGYDFEILYQSRLLNKAADALSRVDTRVELNEMTTSE
Subjt:  LSQRAQAKSIYERELMAVVLSVQKWRHYLLGRKFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQSRLLNKAADALSRVDTRVELNEMTTSE

Query:  IVDMNTVSEEVENDEELQQIVEKLKKEQEVGGKFEWKNGRLLYKGRLVLSQTSSLIP
        IVDMNT+SEEVENDEELQQIVEKLKKEQEVGGKFEWKNGRLLYKGRLVLSQTSSLIP
Subjt:  IVDMNTVSEEVENDEELQQIVEKLKKEQEVGGKFEWKNGRLLYKGRLVLSQTSSLIP

TrEMBL top hitse value%identityAlignment
A0A5A7UYM1 Ty3/gypsy retrotransposon protein2.8e-24588.27Show/hide
Query:  MPDQRPINVRPYKYGHVQKEEIENLVAEMLQDGIIRPSHSPYSSPVLLVKKKDGGWRFCVDYRKLNQATVSDKFPIPVIEELLDELHGAAVFSKLDLKSG
        +PDQ+PINVRPYKYGH+QK EIE LVAEMLQDG+IRPS SPYSSPVLLVKKKDGGWRFCVDYRKLNQAT+SDKFPIPVIEELLDEL+GAAVFSKLDLKSG
Subjt:  MPDQRPINVRPYKYGHVQKEEIENLVAEMLQDGIIRPSHSPYSSPVLLVKKKDGGWRFCVDYRKLNQATVSDKFPIPVIEELLDELHGAAVFSKLDLKSG

Query:  YHQIRMK-EDIEKTAFRTHDGHYEFLVMPFGLTNAPATFKSLMNQVFKPFLRRCVLVFFDDILVYSNDISEHEKHLGMVFTVLRDNQLYANQKKCVFTHS
        YHQIRMK ED+EKTAFRTH+GHYEFLVMPFGLTNAPATF+SLMNQVFKPFLRRCVLVFFDDILVYS DI E EKHLGMVF VLRDNQLYAN KKCVF HS
Subjt:  YHQIRMK-EDIEKTAFRTHDGHYEFLVMPFGLTNAPATFKSLMNQVFKPFLRRCVLVFFDDILVYSNDISEHEKHLGMVFTVLRDNQLYANQKKCVFTHS

Query:  KIQYLGHQISKKGVEADEEKIRNMVSWSRPSDVSELRRFLGLTDYYRRFVKGYSNIATTLTKLLQKNAFKWEEEAETAFVKLKVAMTTIPVLALPDWTLP
        KIQYLGHQISK GVEADE+KIR+MV+W RPSDV+ELR FLGLT YYRRFVKGYSNIAT LTKLLQKNAFKW E+AETAFV+LKVAMTTIPVLALPDW+LP
Subjt:  KIQYLGHQISKKGVEADEEKIRNMVSWSRPSDVSELRRFLGLTDYYRRFVKGYSNIATTLTKLLQKNAFKWEEEAETAFVKLKVAMTTIPVLALPDWTLP

Query:  FTIETDASDSGLGAVLSQRGHPIAFFSQKLSQRAQAKSIYERELMAVVLSVQKWRHYLLGRKFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIL
        FTIETDAS SGLGAVLSQRGHPIAF+SQKLSQRAQAKSIYERELMAVVLSVQ+WRHYLLGRKF+I+SDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIL
Subjt:  FTIETDASDSGLGAVLSQRGHPIAFFSQKLSQRAQAKSIYERELMAVVLSVQKWRHYLLGRKFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIL

Query:  YQSRLLNKAADALSRVDTRVELNEMTTSEIVDMNTVSEEVENDEELQQIVEKLKKEQEVGGKFEWKNGRLLYKGRLVLSQTSSLIP
        YQ   LNKAADALSRV+ ++EL+EMTTS IVD++ V EEV+ DE LQ+IV KLKKEQEV GKFEWKNGRLLYKGRLVL QTSSLIP
Subjt:  YQSRLLNKAADALSRVDTRVELNEMTTSEIVDMNTVSEEVENDEELQQIVEKLKKEQEVGGKFEWKNGRLLYKGRLVLSQTSSLIP

A0A5A7V3B9 Transposon Ty3-G Gag-Pol polyprotein7.9e-25698.69Show/hide
Query:  MLQDGIIRPSHSPYSSPVLLVKKKDGGWRFCVDYRKLNQATVSDKFPIPVIEELLDELHGAAVFSKLDLKSGYHQIRMKEDIEKTAFRTHDGHYEFLVMP
        MLQDGIIRPSHSPYSSPVLLVKKKDGGWRFCVDYRKLNQATVSDKFPIPVIEELLDELHGAAVFSKLDLKSGYHQIRMKEDIEKTAFRTHDGHYEFLVMP
Subjt:  MLQDGIIRPSHSPYSSPVLLVKKKDGGWRFCVDYRKLNQATVSDKFPIPVIEELLDELHGAAVFSKLDLKSGYHQIRMKEDIEKTAFRTHDGHYEFLVMP

Query:  FGLTNAPATFKSLMNQVFKPFLRRCVLVFFDDILVYSNDISEHEKHLGMVFTVLRDNQLYANQKKCVFTHSKIQYLGHQISKKGVEADEEKIRNMVSWSR
        FGLTNA ATFKSLMNQ FKPFLRRCVLVFFDDILVYSNDISEHEKHLGMVFTVLRDNQLYANQKKCVFTHSKIQYLGHQISKKGVEADEEKIRNMVSWSR
Subjt:  FGLTNAPATFKSLMNQVFKPFLRRCVLVFFDDILVYSNDISEHEKHLGMVFTVLRDNQLYANQKKCVFTHSKIQYLGHQISKKGVEADEEKIRNMVSWSR

Query:  PSDVSELRRFLGLTDYYRRFVKGYSNIATTLTKLLQKNAFKWEEEAETAFVKLKVAMTTIPVLALPDWTLPFTIETDASDSGLGAVLSQRGHPIAFFSQK
        PSDVSELRRFLGLTDYYRRFVKGYSNIATTLTKLLQKNAFKWEEE ETAFVKLKVAMTTIPVLALPDWTLPFTIETDASDSGLGAVLSQRGHPIAFFSQK
Subjt:  PSDVSELRRFLGLTDYYRRFVKGYSNIATTLTKLLQKNAFKWEEEAETAFVKLKVAMTTIPVLALPDWTLPFTIETDASDSGLGAVLSQRGHPIAFFSQK

Query:  LSQRAQAKSIYERELMAVVLSVQKWRHYLLGRKFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQSRLLNKAADALSRVDTRVELNEMTTSE
        LSQRAQAKSIYERELM VVLSVQKWRHYLLGRKFTIMSDQKA KFLLEQREVQPQFQKWLTKLLGYDFEILYQSRLLNKAADALSRVDTRVELNEMTTSE
Subjt:  LSQRAQAKSIYERELMAVVLSVQKWRHYLLGRKFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQSRLLNKAADALSRVDTRVELNEMTTSE

Query:  IVDMNTVSEEVENDEELQQIVEKLKKEQEVGGKFEWKNGRLLYKGRLVLSQTSSLIP
        IVDMNT+SEEVENDEELQQIVEKLKKEQEVGGKFEWKNGRLLYKGRLVLSQTSSLIP
Subjt:  IVDMNTVSEEVENDEELQQIVEKLKKEQEVGGKFEWKNGRLLYKGRLVLSQTSSLIP

A0A5D3CTG3 Transposon Ty3-G Gag-Pol polyprotein1.3e-25398.47Show/hide
Query:  MLQDGIIRPSHSPYSSPVLLVKKKDGGWRFCVDYRKLNQATVSDKFPIPVIEELLDELHGAAVFSKLDLKSGYHQIRMKEDIEKTAFRTHDGHYEFLVMP
        MLQDGIIRPSHSPYSSPVLLVKKKDGGWRFCVDYRKLNQATVSDKFPIPVIEELLDELHGAAVFSKLDLKSGYHQIRMKEDIEKTAFRTHDGH EFLVMP
Subjt:  MLQDGIIRPSHSPYSSPVLLVKKKDGGWRFCVDYRKLNQATVSDKFPIPVIEELLDELHGAAVFSKLDLKSGYHQIRMKEDIEKTAFRTHDGHYEFLVMP

Query:  FGLTNAPATFKSLMNQVFKPFLRRCVLVFFDDILVYSNDISEHEKHLGMVFTVLRDNQLYANQKKCVFTHSKIQYLGHQISKKGVEADEEKIRNMVSWSR
        FGLTNA ATFKSLMNQ FKPFLRRCVLVFFDDILVYSNDISEHEKHLGMVFTVLRDNQLYANQKKCVFTHSKIQYLGHQISKKGVEADEEKIRNMVSWSR
Subjt:  FGLTNAPATFKSLMNQVFKPFLRRCVLVFFDDILVYSNDISEHEKHLGMVFTVLRDNQLYANQKKCVFTHSKIQYLGHQISKKGVEADEEKIRNMVSWSR

Query:  PSDVSELRRFLGLTDYYRRFVKGYSNIATTLTKLLQKNAFKWEEEAETAFVKLKVAMTTIPVLALPDWTLPFTIETDASDSGLGAVLSQRGHPIAFFSQK
        PSDVSELRRFLGLTDYYRRFVKGYSNIATTLTKLLQKNAFKWEEE ETAFVKLKVAMTTIPVLALPDWTLPFTIETDASDSGLGAVLSQRGHPIAFFSQK
Subjt:  PSDVSELRRFLGLTDYYRRFVKGYSNIATTLTKLLQKNAFKWEEEAETAFVKLKVAMTTIPVLALPDWTLPFTIETDASDSGLGAVLSQRGHPIAFFSQK

Query:  LSQRAQAKSIYERELMAVVLSVQKWRHYLLGRKFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQSRLLNKAADALSRVDTRVELNEMTTSE
        LSQRAQAKSIYERELM VVLSVQKWRHYLLGRKFTIMSDQKA KFLLEQREVQPQFQKWLTKLLGYDFEILYQSRLLNKAADALSRVDTRVELNEMTTSE
Subjt:  LSQRAQAKSIYERELMAVVLSVQKWRHYLLGRKFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQSRLLNKAADALSRVDTRVELNEMTTSE

Query:  IVDMNTVSEEVENDEELQQIVEKLKKEQEVGGKFEWKNGRLLYKGRLVLSQTSSLIP
        IVDMNT+SEEVENDEELQQIVEKLKKEQEVGGKFEWKNGRLLYKGRLVLSQTSSLIP
Subjt:  IVDMNTVSEEVENDEELQQIVEKLKKEQEVGGKFEWKNGRLLYKGRLVLSQTSSLIP

A0A5D3CW02 Uncharacterized protein1.9e-24994.04Show/hide
Query:  MPDQRPINVRPYKYGHVQKEEIENLVAEMLQDGIIRPSHSPYSSPVLLVKKKDGGWRFCVDYRKLNQATVSDKFPIPVIEELLDELHGAAVFSKLDLKSG
        MPDQRPINVRPYKYGHVQKEEIENLVAEMLQDGIIRPSHSPYSSPVLLVK+KDGGWRFCVDYRKLNQATVSDKFPIPVIEELLDELHGAAVFSKLDLKSG
Subjt:  MPDQRPINVRPYKYGHVQKEEIENLVAEMLQDGIIRPSHSPYSSPVLLVKKKDGGWRFCVDYRKLNQATVSDKFPIPVIEELLDELHGAAVFSKLDLKSG

Query:  YHQIRMK-EDIEKTAFRTHDGHYEFLVMPFGLTNAPATFKSLMNQVFKPFLRRCVLVFFDDILVYSNDISEHEKHLGMVFTVLRDNQLYANQKKCVFTHS
        YHQIRMK EDIEKTAFRTH+GHYEFLVMPFGLTNA ATF+SLMNQVFKPFLRRCVLVF  DILVYSNDISEHEKHLGMVF +LRDNQLYANQKKCVF HS
Subjt:  YHQIRMK-EDIEKTAFRTHDGHYEFLVMPFGLTNAPATFKSLMNQVFKPFLRRCVLVFFDDILVYSNDISEHEKHLGMVFTVLRDNQLYANQKKCVFTHS

Query:  KIQYLGHQISKKGVEADEEKIRNMVSWSRPSDVSELRRFLGLTDYYRRFVKGYSNIATTLTKLLQKNAFKWEEEAETAFVKLKVAMTTIPVLALPDWTLP
        KIQYLGH ISKKGVEADEEKI++MVSW RPSDVSELR FLGLT YYRRFVKGYS+IAT LTKLLQKNAFKWEEEAETAFVKLKVAMTTIPVLALPDWTLP
Subjt:  KIQYLGHQISKKGVEADEEKIRNMVSWSRPSDVSELRRFLGLTDYYRRFVKGYSNIATTLTKLLQKNAFKWEEEAETAFVKLKVAMTTIPVLALPDWTLP

Query:  FTIETDASDSGLGAVLSQRGHPIAFFSQKLSQRAQAKSIYERELMAVVLSVQKWRHYLLGRKFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIL
        FTIETDAS SGLGAVLSQRGHPIAFFSQKLSQRAQ KSIYERELM VVLSVQKWRHYLLGRKF IMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIL
Subjt:  FTIETDASDSGLGAVLSQRGHPIAFFSQKLSQRAQAKSIYERELMAVVLSVQKWRHYLLGRKFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIL

Query:  YQSRLLNKAADALSRVDTRVELNEMTTSEIVDMNTVSEEVENDEELQQIVEKLKKEQEVGGKFEWKNGRL
        YQ  LLNKAADALSRVDTRVELNEMTTS IVDMNTVSEEVENDEELQQI+EKLKKE EVGGKFEWKNG L
Subjt:  YQSRLLNKAADALSRVDTRVELNEMTTSEIVDMNTVSEEVENDEELQQIVEKLKKEQEVGGKFEWKNGRL

A0A5D3DZZ7 Ty3/gypsy retrotransposon protein2.0e-24388.27Show/hide
Query:  MPDQRPINVRPYKYGHVQKEEIENLVAEMLQDGIIRPSHSPYSSPVLLVKKKDGGWRFCVDYRKLNQATVSDKFPIPVIEELLDELHGAAVFSKLDLKSG
        MP+QRPINVRPYKYGHVQK EIE LV EMLQDGIIRPS SPYSSPVLLVKKKDGGW FCVDYRKLNQATVSDKFPIP+IEELLDEL+GAAVFSKLDLKSG
Subjt:  MPDQRPINVRPYKYGHVQKEEIENLVAEMLQDGIIRPSHSPYSSPVLLVKKKDGGWRFCVDYRKLNQATVSDKFPIPVIEELLDELHGAAVFSKLDLKSG

Query:  YHQIRMK-EDIEKTAFRTHDGHYEFLVMPFGLTNAPATFKSLMNQVFKPFLRRCVLVFFDDILVYSNDISEHEKHLGMVFTVLRDNQLYANQKKCVFTHS
        YHQIRMK EDIEKTAFRTH+GHYEFLVMPFGLTNAP TF+SLMNQVFKPFLRRCVLVFFDDILVYS+DI+EHEKHLGMVF  LRDNQLYAN KKCVF HS
Subjt:  YHQIRMK-EDIEKTAFRTHDGHYEFLVMPFGLTNAPATFKSLMNQVFKPFLRRCVLVFFDDILVYSNDISEHEKHLGMVFTVLRDNQLYANQKKCVFTHS

Query:  KIQYLGHQISKKGVEADEEKIRNMVSWSRPSDVSELRRFLGLTDYYRRFVKGYSNIATTLTKLLQKNAFKWEEEAETAFVKLKVAMTTIPVLALPDWTLP
        KIQYLGHQISK GVEADE+KIR+MV+W RPSDV+ELR FLGL  YYRRFV+GYSNIAT LTKLLQKNAFKW EEAETAFVKLKVAMTTIPVLALPDW LP
Subjt:  KIQYLGHQISKKGVEADEEKIRNMVSWSRPSDVSELRRFLGLTDYYRRFVKGYSNIATTLTKLLQKNAFKWEEEAETAFVKLKVAMTTIPVLALPDWTLP

Query:  FTIETDASDSGLGAVLSQRGHPIAFFSQKLSQRAQAKSIYERELMAVVLSVQKWRHYLLGRKFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIL
        FTIETDAS SGLGAVLSQRGHPIAF+SQKLSQRAQ KSIYERELMAVVLSVQ+WRHYLLGRKF+I+SDQKALKFL EQREVQ +FQKWLTKLLGYDFEIL
Subjt:  FTIETDASDSGLGAVLSQRGHPIAFFSQKLSQRAQAKSIYERELMAVVLSVQKWRHYLLGRKFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIL

Query:  YQSRLLNKAADALSRVDTRVELNEMTTSEIVDMNTVSEEVENDEELQQIVEKLKKEQEVGGKFEWKNGRLLYKGRLVLSQTSSLIP
        YQ  LLNKAADALSRV+ R+EL+EMTTS IVD++ V EEV+ DEELQQIV KLKKEQEVGGKFEWKN RLLYKGRLVL +TSSLIP
Subjt:  YQSRLLNKAADALSRVDTRVELNEMTTSEIVDMNTVSEEVENDEELQQIVEKLKKEQEVGGKFEWKNGRLLYKGRLVLSQTSSLIP

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.61.3e-9041.07Show/hide
Query:  YKYGHVQKEEIENLVAEMLQDGIIRPSHSPYSSPVLLVKKKDGG-----WRFCVDYRKLNQATVSDKFPIPVIEELLDELHGAAVFSKLDLKSGYHQIRM
        Y Y    ++E+E+ + +ML  GIIR S+SPY+SP+ +V KK        +R  +DYRKLN+ TV D+ PIP ++E+L +L     F+ +DL  G+HQI M
Subjt:  YKYGHVQKEEIENLVAEMLQDGIIRPSHSPYSSPVLLVKKKDGG-----WRFCVDYRKLNQATVSDKFPIPVIEELLDELHGAAVFSKLDLKSGYHQIRM

Query:  -KEDIEKTAFRTHDGHYEFLVMPFGLTNAPATFKSLMNQVFKPFLRRCVLVFFDDILVYSNDISEHEKHLGMVFTVLRDNQLYANQKKCVFTHSKIQYLG
          E + KTAF T  GHYE+L MPFGL NAPATF+  MN + +P L +  LV+ DDI+V+S  + EH + LG+VF  L    L     KC F   +  +LG
Subjt:  -KEDIEKTAFRTHDGHYEFLVMPFGLTNAPATFKSLMNQVFKPFLRRCVLVFFDDILVYSNDISEHEKHLGMVFTVLRDNQLYANQKKCVFTHSKIQYLG

Query:  HQISKKGVEADEEKIRNMVSWSRPSDVSELRRFLGLTDYYRRFVKGYSNIATTLTKLLQKN--AFKWEEEAETAFVKLKVAMTTIPVLALPDWTLPFTIE
        H ++  G++ + EKI  +  +  P+   E++ FLGLT YYR+F+  +++IA  +TK L+KN        E ++AF KLK  ++  P+L +PD+T  FT+ 
Subjt:  HQISKKGVEADEEKIRNMVSWSRPSDVSELRRFLGLTDYYRRFVKGYSNIATTLTKLLQKN--AFKWEEEAETAFVKLKVAMTTIPVLALPDWTLPFTIE

Query:  TDASDSGLGAVLSQRGHPIAFFSQKLSQRAQAKSIYERELMAVVLSVQKWRHYLLGRKFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQSR
        TDASD  LGAVLSQ GHP+++ S+ L++     S  E+EL+A+V + + +RHYLLGR F I SD + L +L   ++   +  +W  KL  +DF+I Y   
Subjt:  TDASDSGLGAVLSQRGHPIAFFSQKLSQRAQAKSIYERELMAVVLSVQKWRHYLLGRKFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQSR

Query:  LLNKAADALSRVDTRVELNEMTTSEIVDMNTVSEEVENDEELQQIVEK
          N  ADALS    R++L E   SE     T     E++ +L  I E+
Subjt:  LLNKAADALSRVDTRVELNEMTTSEIVDMNTVSEEVENDEELQQIVEK

P10401 Retrovirus-related Pol polyprotein from transposon gypsy5.5e-7335.75Show/hide
Query:  DQRPINVRPYKYGHVQKEEIENLVAEMLQDGIIRPSHSPYSSPVLLVKKK------DGGWRFCVDYRKLNQATVSDKFPIPVIEELLDELHGAAVFSKLD
        D  P+  R Y       + + N V ++L+DGIIRPS SPY+SP  +V KK      +   R  +D+RKLN+ T+ D++P+P I  +L  L  A  F+ LD
Subjt:  DQRPINVRPYKYGHVQKEEIENLVAEMLQDGIIRPSHSPYSSPVLLVKKK------DGGWRFCVDYRKLNQATVSDKFPIPVIEELLDELHGAAVFSKLD

Query:  LKSGYHQIRMKE-DIEKTAFRTHDGHYEFLVMPFGLTNAPATFKSLMNQVFKPFLRRCVLVFFDDILVYSNDISEHEKHLGMVFTVLRDNQLYANQKKCV
        LKSGYHQI + E D EKT+F  + G YEF  +PFGL NA + F+  ++ V +  + +   V+ DD++++S + S+H +H+  V   L D  +  +Q+K  
Subjt:  LKSGYHQIRMKE-DIEKTAFRTHDGHYEFLVMPFGLTNAPATFKSLMNQVFKPFLRRCVLVFFDDILVYSNDISEHEKHLGMVFTVLRDNQLYANQKKCV

Query:  FTHSKIQYLGHQISKKGVEADEEKIRNMVSWSRPSDVSELRRFLGLTDYYRRFVKGYSNIATTLTKLL------------QKNAFKWEEEAETAFVKLK-
        F    ++YLG  +SK G ++D EK++ +  +  P  V ++R FLGL  YYR F+K ++ IA  +T +L            +K   ++ E    AF +L+ 
Subjt:  FTHSKIQYLGHQISKKGVEADEEKIRNMVSWSRPSDVSELRRFLGLTDYYRRFVKGYSNIATTLTKLL------------QKNAFKWEEEAETAFVKLK-

Query:  VAMTTIPVLALPDWTLPFTIETDASDSGLGAVLSQRGHPIAFFSQKLSQRAQAKSIYERELMAVVLSVQKWRHYLLG-RKFTIMSDQKALKFLLEQREVQ
        +  +   +L  PD+  PF + TDAS SG+GAVLSQ G PI   S+ L Q  Q  +  EREL+A+V ++ K +++L G R+  I +D + L F +  R   
Subjt:  VAMTTIPVLALPDWTLPFTIETDASDSGLGAVLSQRGHPIAFFSQKLSQRAQAKSIYERELMAVVLSVQKWRHYLLG-RKFTIMSDQKALKFLLEQREVQ

Query:  PQFQKWLTKLLGYDFEILYQSRLLNKAADALSRVDTRVELNE
         + ++W + +  ++ ++ Y+    N  ADALSR +     NE
Subjt:  PQFQKWLTKLLGYDFEILYQSRLLNKAADALSRVDTRVELNE

P20825 Retrovirus-related Pol polyprotein from transposon 2973.8e-9040.53Show/hide
Query:  PINVRPYKYGHVQKEEIENLVAEMLQDGIIRPSHSPYSSPVLLVKKKDGG-----WRFCVDYRKLNQATVSDKFPIPVIEELLDELHGAAVFSKLDLKSG
        PI  + Y      + E+EN V EML  G+IR S+SPY+SP  +V KK        +R  +DYRKLN+ T+ D++PIP ++E+L +L     F+ +DL  G
Subjt:  PINVRPYKYGHVQKEEIENLVAEMLQDGIIRPSHSPYSSPVLLVKKKDGG-----WRFCVDYRKLNQATVSDKFPIPVIEELLDELHGAAVFSKLDLKSG

Query:  YHQIRM-KEDIEKTAFRTHDGHYEFLVMPFGLTNAPATFKSLMNQVFKPFLRRCVLVFFDDILVYSNDISEHEKHLGMVFTVLRDNQLYANQKKCVFTHS
        +HQI M +E I KTAF T  GHYE+L MPFGL NAPATF+  MN + +P L +  LV+ DDI+++S  ++EH   + +VFT L D  L     KC F   
Subjt:  YHQIRM-KEDIEKTAFRTHDGHYEFLVMPFGLTNAPATFKSLMNQVFKPFLRRCVLVFFDDILVYSNDISEHEKHLGMVFTVLRDNQLYANQKKCVFTHS

Query:  KIQYLGHQISKKGVEADEEKIRNMVSWSRPSDVSELRRFLGLTDYYRRFVKGYSNIATTLTKLLQKNAFKWEEEAE--TAFVKLKVAMTTIPVLALPDWT
        +  +LGH ++  G++ +  K++ +VS+  P+   E+R FLGLT YYR+F+  Y++IA  +T  L+K      ++ E   AF KLK  +   P+L LPD+ 
Subjt:  KIQYLGHQISKKGVEADEEKIRNMVSWSRPSDVSELRRFLGLTDYYRRFVKGYSNIATTLTKLLQKNAFKWEEEAE--TAFVKLKVAMTTIPVLALPDWT

Query:  LPFTIETDASDSGLGAVLSQRGHPIAFFSQKLSQRAQAKSIYERELMAVVLSVQKWRHYLLGRKFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFE
          F + TDAS+  LGAVLSQ GHPI+F S+ L+      S  E+EL+A+V + + +RHYLLGR+F I SD + L++L   +E   + ++W  +L  Y F+
Subjt:  LPFTIETDASDSGLGAVLSQRGHPIAFFSQKLSQRAQAKSIYERELMAVVLSVQKWRHYLLGRKFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFE

Query:  ILYQSRLLNKAADALSRVDTRVELNEMTTSEIVDMNTVSEEVENDEELQQIVEK
        I Y     N  ADALSR+  ++E N  + +      T     E++  L  + EK
Subjt:  ILYQSRLLNKAADALSRVDTRVELNEMTTSEIVDMNTVSEEVENDEELQQIVEK

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein2.5e-7335.6Show/hide
Query:  PDQRPINVRPYKYGHVQKEEIENLVAEMLQDGIIRPSHSPYSSPVLLVKKKDGGWRFCVDYRKLNQATVSDKFPIPVIEELLDELHGAAVFSKLDLKSGY
        P  R   ++PY      ++EI  +V ++L +  I PS SP SSPV+LV KKDG +R CVDYR LN+AT+SD FP+P I+ LL  +  A +F+ LDL SGY
Subjt:  PDQRPINVRPYKYGHVQKEEIENLVAEMLQDGIIRPSHSPYSSPVLLVKKKDGGWRFCVDYRKLNQATVSDKFPIPVIEELLDELHGAAVFSKLDLKSGY

Query:  HQIRMK-EDIEKTAFRTHDGHYEFLVMPFGLTNAPATFKSLMNQVFKPFLRRCVLVFFDDILVYSNDISEHEKHLGMVFTVLRDNQLYANQKKCVFTHSK
        HQI M+ +D  KTAF T  G YE+ VMPFGL NAP+TF   M   F+    R V V+ DDIL++S    EH KHL  V   L++  L   +KKC F   +
Subjt:  HQIRMK-EDIEKTAFRTHDGHYEFLVMPFGLTNAPATFKSLMNQVFKPFLRRCVLVFFDDILVYSNDISEHEKHLGMVFTVLRDNQLYANQKKCVFTHSK

Query:  IQYLGHQISKKGVEADEEKIRNMVSWSRPSDVSELRRFLGLTDYYRRFVKGYSNIATTLTKLLQKNAFKWEEEAETAFVKLKVAMTTIPVLALPDWTLPF
         ++LG+ I  + +   + K   +  +  P  V + +RFLG+ +YYRRF+   S IA  + +L   +  +W E+ + A  KLK A+   PVL   +    +
Subjt:  IQYLGHQISKKGVEADEEKIRNMVSWSRPSDVSELRRFLGLTDYYRRFVKGYSNIATTLTKLLQKNAFKWEEEAETAFVKLKVAMTTIPVLALPDWTLPF

Query:  TIETDASDSGLGAVLSQRGHP------IAFFSQKLSQRAQAKSIYERELMAVVLSVQKWRHYLLGRKFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGY
         + TDAS  G+GAVL +  +       + +FS+ L    +     E EL+ ++ ++  +R+ L G+ FT+ +D  +L  L  + E   + Q+WL  L  Y
Subjt:  TIETDASDSGLGAVLSQRGHP------IAFFSQKLSQRAQAKSIYERELMAVVLSVQKWRHYLLGRKFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGY

Query:  DFEILYQSRLLNKAADALSRVDTRVELNEMTTSEIVDMNTVSEEVENDEELQQIVEKLKKEQEVGGKFEWKNGRLLYKGRLVLSQT
        DF + Y +   N  ADA+SR    +      TS  +D  +     ++D     ++  +K+  +     E  +    Y+ +L LS+T
Subjt:  DFEILYQSRLLNKAADALSRVDTRVELNEMTTSEIVDMNTVSEEVENDEELQQIVEKLKKEQEVGGKFEWKNGRLLYKGRLVLSQT

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus2.7e-8037.67Show/hide
Query:  QRPINVRPYKYGHVQKEEIENLVAEMLQDGIIRPSHSPYSSPVLLVKKK-----DGGWRFCVDYRKLNQATVSDKFPIPVIEELLDELHGAAVFSKLDLK
        Q PI  + Y Y    + E+E  + E+LQDGIIRPS+SPY+SP+ +V KK     +  +R  VD+++LN  T+ D +PIP I   L  L  A  F+ LDL 
Subjt:  QRPINVRPYKYGHVQKEEIENLVAEMLQDGIIRPSHSPYSSPVLLVKKK-----DGGWRFCVDYRKLNQATVSDKFPIPVIEELLDELHGAAVFSKLDLK

Query:  SGYHQIRMKE-DIEKTAFRTHDGHYEFLVMPFGLTNAPATFKSLMNQVFKPFLRRCVLVFFDDILVYSNDISEHEKHLGMVFTVLRDNQLYANQKKCVFT
        SG+HQI MKE DI KTAF T +G YEFL +PFGL NAPA F+ +++ + +  + +   V+ DDI+V+S D   H K+L +V   L    L  N +K  F 
Subjt:  SGYHQIRMKE-DIEKTAFRTHDGHYEFLVMPFGLTNAPATFKSLMNQVFKPFLRRCVLVFFDDILVYSNDISEHEKHLGMVFTVLRDNQLYANQKKCVFT

Query:  HSKIQYLGHQISKKGVEADEEKIRNMVSWSRPSDVSELRRFLGLTDYYRRFVKGYSNIATTLTKLLQ------------KNAFKWEEEAETAFVKLKVAM
         +++++LG+ ++  G++AD +K+R +     P+ V EL+RFLG+T YYR+F++ Y+ +A  LT L +            K     +E A  +F  LK  +
Subjt:  HSKIQYLGHQISKKGVEADEEKIRNMVSWSRPSDVSELRRFLGLTDYYRRFVKGYSNIATTLTKLLQ------------KNAFKWEEEAETAFVKLKVAM

Query:  TTIPVLALPDWTLPFTIETDASDSGLGAVLSQ----RGHPIAFFSQKLSQRAQAKSIYERELMAVVLSVQKWRHYLLGR-KFTIMSDQKALKFLLEQREV
         +  +LA P +T PF + TDAS+  +GAVLSQ    R  PIA+ S+ L++  +  +  E+E++A++ S+   R YL G     + +D + L F L  R  
Subjt:  TTIPVLALPDWTLPFTIETDASDSGLGAVLSQ----RGHPIAFFSQKLSQRAQAKSIYERELMAVVLSVQKWRHYLLGR-KFTIMSDQKALKFLLEQREV

Query:  QPQFQKWLTKLLGYDFEILYQSRLLNKAADALSRVDTRVELNEMTT
          + ++W  ++  Y+ E++Y+    N  ADALSR+    +LN+++T
Subjt:  QPQFQKWLTKLLGYDFEILYQSRLLNKAADALSRVDTRVELNEMTT

Arabidopsis top hitse value%identityAlignment
ATMG00850.1 DNA/RNA polymerases superfamily protein1.1e-0760Show/hide
Query:  VQKEEIENLVAEMLQDGIIRPSHSPYSSPVLLVKKKDGGW
        +++  ++N + EML+  II+PS SPYSSPVLLV+KKDGGW
Subjt:  VQKEEIENLVAEMLQDGIIRPSHSPYSSPVLLVKKKDGGW

ATMG00860.1 DNA/RNA polymerases superfamily protein5.2e-3456.59Show/hide
Query:  HLGMVFTVLRDNQLYANQKKCVFTHSKIQYLGHQ--ISKKGVEADEEKIRNMVSWSRPSDVSELRRFLGLTDYYRRFVKGYSNIATTLTKLLQKNAFKWE
        HLGMV  +   +Q YAN+KKC F   +I YLGH+  IS +GV AD  K+  MV W  P + +ELR FLGLT YYRRFVK Y  I   LT+LL+KN+ KW 
Subjt:  HLGMVFTVLRDNQLYANQKKCVFTHSKIQYLGHQ--ISKKGVEADEEKIRNMVSWSRPSDVSELRRFLGLTDYYRRFVKGYSNIATTLTKLLQKNAFKWE

Query:  EEAETAFVKLKVAMTTIPVLALPDWTLPF
        E A  AF  LK A+TT+PVLALPD  LPF
Subjt:  EEAETAFVKLKVAMTTIPVLALPDWTLPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCGACCAAAGACCTATCAATGTAAGACCATATAAGTATGGACATGTCCAGAAGGAAGAAATCGAAAACTTAGTAGCTGAAATGCTACAAGATGGAATCATT
CGGCCTAGCCATAGCCCCTATTCAAGCCCTGTTCTATTGGTTAAGAAAAAAGATGGAGGATGGCGATTTTGCGTAGACTACCGGAAATTGAATCAAGCCACAGTC
TCTGACAAATTCCCAATCCCAGTAATCGAAGAATTATTAGATGAACTACATGGAGCAGCTGTTTTCTCGAAGTTGGATCTCAAATCGGGATATCACCAAATTAGA
ATGAAGGAGGATATAGAAAAAACAGCTTTCCGCACACATGATGGCCACTATGAATTTTTGGTGATGCCGTTCGGTCTAACGAATGCCCCAGCAACCTTCAAATCA
TTGATGAACCAGGTTTTTAAACCCTTCCTTAGACGTTGTGTTTTGGTATTCTTTGATGATATCTTAGTGTACAGCAATGACATAAGTGAGCATGAGAAACACCTA
GGGATGGTTTTCACTGTGCTAAGGGATAATCAACTCTACGCAAATCAGAAGAAATGTGTCTTTACCCACTCTAAAATTCAATACTTGGGGCACCAGATATCAAAG
AAAGGGGTGGAAGCAGATGAAGAAAAGATTAGAAACATGGTCAGTTGGTCAAGACCTTCAGATGTATCAGAATTAAGAAGGTTCTTGGGGTTGACAGACTATTAC
CGAAGGTTTGTTAAAGGTTACAGTAACATTGCGACGACCCTCACTAAGCTCTTACAGAAAAATGCATTTAAATGGGAAGAAGAAGCCGAAACAGCATTCGTGAAA
CTAAAGGTAGCCATGACCACTATACCCGTATTAGCATTACCGGACTGGACTCTACCTTTCACCATAGAAACAGATGCATCAGACAGCGGATTGGGAGCAGTGTTA
TCTCAAAGAGGACATCCCATAGCTTTCTTTAGTCAGAAGTTGTCGCAGAGAGCTCAGGCGAAGTCCATTTATGAAAGGGAATTGATGGCTGTGGTGTTATCCGTA
CAAAAGTGGCGTCACTACTTGTTGGGAAGGAAATTCACCATCATGTCTGACCAGAAGGCTTTGAAATTTTTGCTAGAACAGAGAGAAGTACAGCCACAATTCCAG
AAATGGTTGACCAAGCTCCTCGGGTATGACTTCGAAATCCTTTATCAATCAAGGTTGTTAAACAAAGCGGCAGATGCTCTCTCACGGGTTGACACAAGGGTAGAG
CTCAATGAGATGACAACCTCTGAAATTGTGGACATGAATACTGTGAGTGAAGAAGTGGAAAATGATGAGGAACTCCAACAAATTGTCGAGAAGTTGAAGAAGGAA
CAGGAAGTTGGGGGAAAATTCGAATGGAAGAATGGTAGATTACTATACAAAGGAAGACTGGTCTTGTCACAAACTTCTTCCCTCATTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCGACCAAAGACCTATCAATGTAAGACCATATAAGTATGGACATGTCCAGAAGGAAGAAATCGAAAACTTAGTAGCTGAAATGCTACAAGATGGAATCATT
CGGCCTAGCCATAGCCCCTATTCAAGCCCTGTTCTATTGGTTAAGAAAAAAGATGGAGGATGGCGATTTTGCGTAGACTACCGGAAATTGAATCAAGCCACAGTC
TCTGACAAATTCCCAATCCCAGTAATCGAAGAATTATTAGATGAACTACATGGAGCAGCTGTTTTCTCGAAGTTGGATCTCAAATCGGGATATCACCAAATTAGA
ATGAAGGAGGATATAGAAAAAACAGCTTTCCGCACACATGATGGCCACTATGAATTTTTGGTGATGCCGTTCGGTCTAACGAATGCCCCAGCAACCTTCAAATCA
TTGATGAACCAGGTTTTTAAACCCTTCCTTAGACGTTGTGTTTTGGTATTCTTTGATGATATCTTAGTGTACAGCAATGACATAAGTGAGCATGAGAAACACCTA
GGGATGGTTTTCACTGTGCTAAGGGATAATCAACTCTACGCAAATCAGAAGAAATGTGTCTTTACCCACTCTAAAATTCAATACTTGGGGCACCAGATATCAAAG
AAAGGGGTGGAAGCAGATGAAGAAAAGATTAGAAACATGGTCAGTTGGTCAAGACCTTCAGATGTATCAGAATTAAGAAGGTTCTTGGGGTTGACAGACTATTAC
CGAAGGTTTGTTAAAGGTTACAGTAACATTGCGACGACCCTCACTAAGCTCTTACAGAAAAATGCATTTAAATGGGAAGAAGAAGCCGAAACAGCATTCGTGAAA
CTAAAGGTAGCCATGACCACTATACCCGTATTAGCATTACCGGACTGGACTCTACCTTTCACCATAGAAACAGATGCATCAGACAGCGGATTGGGAGCAGTGTTA
TCTCAAAGAGGACATCCCATAGCTTTCTTTAGTCAGAAGTTGTCGCAGAGAGCTCAGGCGAAGTCCATTTATGAAAGGGAATTGATGGCTGTGGTGTTATCCGTA
CAAAAGTGGCGTCACTACTTGTTGGGAAGGAAATTCACCATCATGTCTGACCAGAAGGCTTTGAAATTTTTGCTAGAACAGAGAGAAGTACAGCCACAATTCCAG
AAATGGTTGACCAAGCTCCTCGGGTATGACTTCGAAATCCTTTATCAATCAAGGTTGTTAAACAAAGCGGCAGATGCTCTCTCACGGGTTGACACAAGGGTAGAG
CTCAATGAGATGACAACCTCTGAAATTGTGGACATGAATACTGTGAGTGAAGAAGTGGAAAATGATGAGGAACTCCAACAAATTGTCGAGAAGTTGAAGAAGGAA
CAGGAAGTTGGGGGAAAATTCGAATGGAAGAATGGTAGATTACTATACAAAGGAAGACTGGTCTTGTCACAAACTTCTTCCCTCATTCCTTGA
Protein sequenceShow/hide protein sequence
MPDQRPINVRPYKYGHVQKEEIENLVAEMLQDGIIRPSHSPYSSPVLLVKKKDGGWRFCVDYRKLNQATVSDKFPIPVIEELLDELHGAAVFSKLDLKSGYHQIR
MKEDIEKTAFRTHDGHYEFLVMPFGLTNAPATFKSLMNQVFKPFLRRCVLVFFDDILVYSNDISEHEKHLGMVFTVLRDNQLYANQKKCVFTHSKIQYLGHQISK
KGVEADEEKIRNMVSWSRPSDVSELRRFLGLTDYYRRFVKGYSNIATTLTKLLQKNAFKWEEEAETAFVKLKVAMTTIPVLALPDWTLPFTIETDASDSGLGAVL
SQRGHPIAFFSQKLSQRAQAKSIYERELMAVVLSVQKWRHYLLGRKFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQSRLLNKAADALSRVDTRVE
LNEMTTSEIVDMNTVSEEVENDEELQQIVEKLKKEQEVGGKFEWKNGRLLYKGRLVLSQTSSLIP