| GenBank top hits | e value | %identity | Alignment |
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| AAO73521.1 gag-pol polyprotein [Glycine max] | 5.1e-47 | 70.87 | Show/hide |
Query: MGNNLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIPQNLMTLYCDNMSAIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRS
+GNNLISWF+KKQNCVSLST EAEYIA GS+C+QL+WMK M+KEY + Q++MTLYCDNMSAI+ISKN VQHSRTKHIDIRHH+IR L++DK+I+L+H+ +
Subjt: MGNNLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIPQNLMTLYCDNMSAIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRS
Query: NLQLADIFTKPFDVNFFEHLRVGLGVC
Q+ADIFTK D N FE LR LG+C
Subjt: NLQLADIFTKPFDVNFFEHLRVGLGVC
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| AAO73523.1 gag-pol polyprotein [Glycine max] | 5.1e-47 | 70.87 | Show/hide |
Query: MGNNLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIPQNLMTLYCDNMSAIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRS
+GNNLISWF+KKQNCVSLST EAEYIA GS+C+QL+WMK M+KEY + Q++MTLYCDNMSAI+ISKN VQHSRTKHIDIRHH+IR L++DK+I+L+H+ +
Subjt: MGNNLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIPQNLMTLYCDNMSAIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRS
Query: NLQLADIFTKPFDVNFFEHLRVGLGVC
Q+ADIFTK D N FE LR LG+C
Subjt: NLQLADIFTKPFDVNFFEHLRVGLGVC
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| AAO73527.1 gag-pol polyprotein [Glycine max] | 5.1e-47 | 70.87 | Show/hide |
Query: MGNNLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIPQNLMTLYCDNMSAIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRS
+GNNLISWF+KKQNCVSLST EAEYIA GS+C+QL+WMK M+KEY + Q++MTLYCDNMSAI+ISKN VQHSRTKHIDIRHH+IR L++DK+I+L+H+ +
Subjt: MGNNLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIPQNLMTLYCDNMSAIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRS
Query: NLQLADIFTKPFDVNFFEHLRVGLGVC
Q+ADIFTK D N FE LR LG+C
Subjt: NLQLADIFTKPFDVNFFEHLRVGLGVC
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| KAA0048308.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 4.6e-48 | 77.42 | Show/hide |
Query: MGNNLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIPQNLMTLYCDNMSAIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRS
+GNNLISWF+KKQN VSLST EAEYIAVGS CTQLIWMKNM+ EY I Q++MT+YCDNM+AIDISKN +Q SRTK+IDIRHHFIR+LIE+KII+L+HIRS
Subjt: MGNNLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIPQNLMTLYCDNMSAIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRS
Query: NLQLADIFTKPFDVNFFEHLRVGL
N QLADIFTKP D F+HLR GL
Subjt: NLQLADIFTKPFDVNFFEHLRVGL
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| KAA0055610.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 1.8e-52 | 78.91 | Show/hide |
Query: MGNNLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIPQNLMTLYCDNMSAIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRS
+GNNLISW +KKQNCVSLST EAEYIA GS CTQLIWMKNM+ EYG Q+ MTLYCDN SAIDISKN VQHSRTKHIDIRHHFIR+L+EDK+I L HIRS
Subjt: MGNNLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIPQNLMTLYCDNMSAIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRS
Query: NLQLADIFTKPFDVNFFEHLRVGLGVCK
NLQL DIFTKP D + FE+LR GLGVC+
Subjt: NLQLADIFTKPFDVNFFEHLRVGLGVCK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TZB3 Gag-pol polyprotein | 2.2e-48 | 77.42 | Show/hide |
Query: MGNNLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIPQNLMTLYCDNMSAIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRS
+GNNLISWF+KKQN VSLST EAEYIAVGS CTQLIWMKNM+ EY I Q++MT+YCDNM+AIDISKN +Q SRTK+IDIRHHFIR+LIE+KII+L+HIRS
Subjt: MGNNLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIPQNLMTLYCDNMSAIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRS
Query: NLQLADIFTKPFDVNFFEHLRVGL
N QLADIFTKP D F+HLR GL
Subjt: NLQLADIFTKPFDVNFFEHLRVGL
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| A0A5D3DLL1 Gag-pol polyprotein | 8.7e-53 | 78.91 | Show/hide |
Query: MGNNLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIPQNLMTLYCDNMSAIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRS
+GNNLISW +KKQNCVSLST EAEYIA GS CTQLIWMKNM+ EYG Q+ MTLYCDN SAIDISKN VQHSRTKHIDIRHHFIR+L+EDK+I L HIRS
Subjt: MGNNLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIPQNLMTLYCDNMSAIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRS
Query: NLQLADIFTKPFDVNFFEHLRVGLGVCK
NLQL DIFTKP D + FE+LR GLGVC+
Subjt: NLQLADIFTKPFDVNFFEHLRVGLGVCK
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| Q84VH8 Gag-pol polyprotein | 2.5e-47 | 70.87 | Show/hide |
Query: MGNNLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIPQNLMTLYCDNMSAIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRS
+GNNLISWF+KKQNCVSLST EAEYIA GS+C+QL+WMK M+KEY + Q++MTLYCDNMSAI+ISKN VQHSRTKHIDIRHH+IR L++DK+I+L+H+ +
Subjt: MGNNLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIPQNLMTLYCDNMSAIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRS
Query: NLQLADIFTKPFDVNFFEHLRVGLGVC
Q+ADIFTK D N FE LR LG+C
Subjt: NLQLADIFTKPFDVNFFEHLRVGLGVC
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| Q84VI2 Gag-pol polyprotein | 2.5e-47 | 70.87 | Show/hide |
Query: MGNNLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIPQNLMTLYCDNMSAIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRS
+GNNLISWF+KKQNCVSLST EAEYIA GS+C+QL+WMK M+KEY + Q++MTLYCDNMSAI+ISKN VQHSRTKHIDIRHH+IR L++DK+I+L+H+ +
Subjt: MGNNLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIPQNLMTLYCDNMSAIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRS
Query: NLQLADIFTKPFDVNFFEHLRVGLGVC
Q+ADIFTK D N FE LR LG+C
Subjt: NLQLADIFTKPFDVNFFEHLRVGLGVC
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| Q84VI4 Gag-pol polyprotein | 2.5e-47 | 70.87 | Show/hide |
Query: MGNNLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIPQNLMTLYCDNMSAIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRS
+GNNLISWF+KKQNCVSLST EAEYIA GS+C+QL+WMK M+KEY + Q++MTLYCDNMSAI+ISKN VQHSRTKHIDIRHH+IR L++DK+I+L+H+ +
Subjt: MGNNLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIPQNLMTLYCDNMSAIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRS
Query: NLQLADIFTKPFDVNFFEHLRVGLGVC
Q+ADIFTK D N FE LR LG+C
Subjt: NLQLADIFTKPFDVNFFEHLRVGLGVC
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 8.5e-21 | 41.94 | Show/hide |
Query: NLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIP-QNLMTLYCDNMSAIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRSNL
NLI W K+QN V+ S+ EAEY+A+ A + +W+K ++ I +N + +Y DN I I+ N H R KHIDI++HF R+ +++ +I L++I +
Subjt: NLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIP-QNLMTLYCDNMSAIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRSNL
Query: QLADIFTKPFDVNFFEHLRVGLGV
QLADIFTKP F LR LG+
Subjt: QLADIFTKPFDVNFFEHLRVGLGV
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.6e-24 | 46.9 | Show/hide |
Query: ISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIPQNLMTLYCDNMSAIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRSNLQLA
ISW +K Q CV+LST EAEYIA ++IW+K ++E G+ Q +YCD+ SAID+SKN + H+RTKHID+R+H+IR++++D+ + + I +N A
Subjt: ISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIPQNLMTLYCDNMSAIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIRSNLQLA
Query: DIFTKPFDVNFFE
D+ TK N FE
Subjt: DIFTKPFDVNFFE
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.5e-17 | 36.15 | Show/hide |
Query: MGNNLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIP-QNLMTLYCDNMSAIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIR
+G++ ISW +KKQ V S+ EAEY +V + +++ W+ +++ E GI +YCDN+ A + N V HSR KHI I +HFIR ++ + + H+
Subjt: MGNNLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIP-QNLMTLYCDNMSAIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIR
Query: SNLQLADIFTKPFDVNFFEHLRVGLGVCKI
++ QLAD TKP F++ +GV ++
Subjt: SNLQLADIFTKPFDVNFFEHLRVGLGVCKI
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 8.8e-18 | 36.92 | Show/hide |
Query: MGNNLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIP-QNLMTLYCDNMSAIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIR
+G++ ISW +KKQ V S+ EAEY +V + ++L W+ +++ E GI + +YCDN+ A + N V HSR KHI + +HFIR ++ + + H+
Subjt: MGNNLISWFNKKQNCVSLSTMEAEYIAVGSACTQLIWMKNMVKEYGIP-QNLMTLYCDNMSAIDISKNLVQHSRTKHIDIRHHFIRKLIEDKIISLQHIR
Query: SNLQLADIFTKPFDVNFFEHLRVGLGVCKI
++ QLAD TKP F++ +GV K+
Subjt: SNLQLADIFTKPFDVNFFEHLRVGLGVCKI
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