| GenBank top hits | e value | %identity | Alignment |
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| KAA0055406.1 RNA-directed DNA polymerase-like protein [Cucumis melo var. makuwa] | 6.0e-64 | 75.14 | Show/hide |
Query: MTPPALAELRKQLDELLNAGFIGPAKAPYGASVLFQKKKDGSLRLCIDYRVLNKLT-------GDEPKTTCVTKYGAFEFLVMPFGLTNALATFCTLMNQ
M PP AEL KQLDELLNAGFI PAKA YGA VLFQKKKDGSLRLCIDYRVLNKLT G EPKTT VT+YGAFEFL+MPFGLTNA TFCTLMNQ
Subjt: MTPPALAELRKQLDELLNAGFIGPAKAPYGASVLFQKKKDGSLRLCIDYRVLNKLT-------GDEPKTTCVTKYGAFEFLVMPFGLTNALATFCTLMNQ
Query: VFHEYLDKFVVVYLDDIVVYSTTMEDHRDHLQKVFQKLKENQLYVKIEKLGWQKGRLLRYATAQYRNQSQSYAPSLG
VFHEYLDKFVVVYLDDIVVYSTTME+HRDHLQK + +L W+KGRLLRYAT Q +NQS+SYAPS G
Subjt: VFHEYLDKFVVVYLDDIVVYSTTMEDHRDHLQKVFQKLKENQLYVKIEKLGWQKGRLLRYATAQYRNQSQSYAPSLG
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| KAA0066677.1 uncharacterized protein E6C27_scaffold271G00020 [Cucumis melo var. makuwa] | 2.7e-64 | 62.67 | Show/hide |
Query: MTPPALAELRKQLDELLNAGFIGPAKAPYGASVLFQKKKDGSLRLCIDYRVLNKLT---------------------------------------GDEPK
M PP LAELRKQLDELLN GFI PAKAPYGA VLFQKKKDGSLRLCIDYR LNKLT GDEPK
Subjt: MTPPALAELRKQLDELLNAGFIGPAKAPYGASVLFQKKKDGSLRLCIDYRVLNKLT---------------------------------------GDEPK
Query: TTCVTKYGAFEFLVMPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEDHRDHLQKVFQKLKENQLYVKIEK-------------------
TTCVT+YGAFEFLVMPFGLTNA AT CTLMNQVFHEYLDKFVVVYLDDIVVYSTTME+HRDH QKVFQKLKENQLYVK EK
Subjt: TTCVTKYGAFEFLVMPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEDHRDHLQKVFQKLKENQLYVKIEK-------------------
Query: LGWQKGRLLRYATAQYRNQSQSYAP
+G ++G++ Q RNQS+SYAP
Subjt: LGWQKGRLLRYATAQYRNQSQSYAP
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| KAA0066680.1 RNA-directed DNA polymerase-like protein [Cucumis melo var. makuwa] | 7.9e-64 | 61.78 | Show/hide |
Query: MTPPALAELRKQLDELLNAGFIGPAKAPYGASVLFQKKKDGSLRLCIDYRVLNKLT---------------------------------------GDEPK
M PP LAELRKQLDELLNAGFI P KAPYGA VLFQKKKDGSLRLCIDY LNKLT GDEPK
Subjt: MTPPALAELRKQLDELLNAGFIGPAKAPYGASVLFQKKKDGSLRLCIDYRVLNKLT---------------------------------------GDEPK
Query: TTCVTKYGAFEFLVMPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEDHRDHLQKVFQKLKENQLYVKIEK-------------------
TTCVT+YGAFEFL+MPFGLTNA +TFCTLMNQVF+EYLDKFVVVYLDDIVVYSTTME+HRDHLQKVFQKLKENQLYVK EK
Subjt: TTCVTKYGAFEFLVMPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEDHRDHLQKVFQKLKENQLYVKIEK-------------------
Query: LGWQKGRLLRYATAQYRNQSQSYAP
+G ++G++ Q RNQS+SYAP
Subjt: LGWQKGRLLRYATAQYRNQSQSYAP
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| TYK07954.1 reverse transcriptase [Cucumis melo var. makuwa] | 1.0e-63 | 70.9 | Show/hide |
Query: MTPPALAELRKQLDELLNAGFIGPAKAPYGASVLFQKKKDGSLRLCIDYRVLNKLT---------------------------------------GDEPK
M PP LAELRKQLDELLNAGFI PAKAPYGA VLFQKKKDGSLRLCIDYR LNKLT GDEPK
Subjt: MTPPALAELRKQLDELLNAGFIGPAKAPYGASVLFQKKKDGSLRLCIDYRVLNKLT---------------------------------------GDEPK
Query: TTCVTKYGAFEFLVMPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEDHRDHLQKVFQKLKENQLYVKIEKLGWQKGRL
TTCVT+YGAFEFLVMPFGLTNA ATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTME+HRDHLQKVFQKLKENQLYVK EK + + R+
Subjt: TTCVTKYGAFEFLVMPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEDHRDHLQKVFQKLKENQLYVKIEKLGWQKGRL
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| TYK28653.1 reverse transcriptase [Cucumis melo var. makuwa] | 1.0e-63 | 70.9 | Show/hide |
Query: MTPPALAELRKQLDELLNAGFIGPAKAPYGASVLFQKKKDGSLRLCIDYRVLNKLT---------------------------------------GDEPK
M PP LAELRKQLDELLNAGFI PAKAPYGA VLFQKKKDGSLRLCIDYR LNKLT GDEPK
Subjt: MTPPALAELRKQLDELLNAGFIGPAKAPYGASVLFQKKKDGSLRLCIDYRVLNKLT---------------------------------------GDEPK
Query: TTCVTKYGAFEFLVMPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEDHRDHLQKVFQKLKENQLYVKIEKLGWQKGRL
TTCVT+YGAFEFLVMPFGLTNA ATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTME+HRDHLQKVFQKLKENQLYVK EK + + R+
Subjt: TTCVTKYGAFEFLVMPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEDHRDHLQKVFQKLKENQLYVKIEKLGWQKGRL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7VHL6 RNA-directed DNA polymerase-like protein | 3.8e-64 | 61.78 | Show/hide |
Query: MTPPALAELRKQLDELLNAGFIGPAKAPYGASVLFQKKKDGSLRLCIDYRVLNKLT---------------------------------------GDEPK
M PP LAELRKQLDELLNAGFI P KAPYGA VLFQKKKDGSLRLCIDY LNKLT GDEPK
Subjt: MTPPALAELRKQLDELLNAGFIGPAKAPYGASVLFQKKKDGSLRLCIDYRVLNKLT---------------------------------------GDEPK
Query: TTCVTKYGAFEFLVMPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEDHRDHLQKVFQKLKENQLYVKIEK-------------------
TTCVT+YGAFEFL+MPFGLTNA +TFCTLMNQVF+EYLDKFVVVYLDDIVVYSTTME+HRDHLQKVFQKLKENQLYVK EK
Subjt: TTCVTKYGAFEFLVMPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEDHRDHLQKVFQKLKENQLYVKIEK-------------------
Query: LGWQKGRLLRYATAQYRNQSQSYAP
+G ++G++ Q RNQS+SYAP
Subjt: LGWQKGRLLRYATAQYRNQSQSYAP
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| A0A5A7VHT2 Reverse transcriptase domain-containing protein | 1.3e-64 | 62.67 | Show/hide |
Query: MTPPALAELRKQLDELLNAGFIGPAKAPYGASVLFQKKKDGSLRLCIDYRVLNKLT---------------------------------------GDEPK
M PP LAELRKQLDELLN GFI PAKAPYGA VLFQKKKDGSLRLCIDYR LNKLT GDEPK
Subjt: MTPPALAELRKQLDELLNAGFIGPAKAPYGASVLFQKKKDGSLRLCIDYRVLNKLT---------------------------------------GDEPK
Query: TTCVTKYGAFEFLVMPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEDHRDHLQKVFQKLKENQLYVKIEK-------------------
TTCVT+YGAFEFLVMPFGLTNA AT CTLMNQVFHEYLDKFVVVYLDDIVVYSTTME+HRDH QKVFQKLKENQLYVK EK
Subjt: TTCVTKYGAFEFLVMPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEDHRDHLQKVFQKLKENQLYVKIEK-------------------
Query: LGWQKGRLLRYATAQYRNQSQSYAP
+G ++G++ Q RNQS+SYAP
Subjt: LGWQKGRLLRYATAQYRNQSQSYAP
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| A0A5D3C9P8 Reverse transcriptase | 5.0e-64 | 70.9 | Show/hide |
Query: MTPPALAELRKQLDELLNAGFIGPAKAPYGASVLFQKKKDGSLRLCIDYRVLNKLT---------------------------------------GDEPK
M PP LAELRKQLDELLNAGFI PAKAPYGA VLFQKKKDGSLRLCIDYR LNKLT GDEPK
Subjt: MTPPALAELRKQLDELLNAGFIGPAKAPYGASVLFQKKKDGSLRLCIDYRVLNKLT---------------------------------------GDEPK
Query: TTCVTKYGAFEFLVMPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEDHRDHLQKVFQKLKENQLYVKIEKLGWQKGRL
TTCVT+YGAFEFLVMPFGLTNA ATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTME+HRDHLQKVFQKLKENQLYVK EK + + R+
Subjt: TTCVTKYGAFEFLVMPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEDHRDHLQKVFQKLKENQLYVKIEKLGWQKGRL
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| A0A5D3DF56 RNA-directed DNA polymerase-like protein | 2.9e-64 | 75.14 | Show/hide |
Query: MTPPALAELRKQLDELLNAGFIGPAKAPYGASVLFQKKKDGSLRLCIDYRVLNKLT-------GDEPKTTCVTKYGAFEFLVMPFGLTNALATFCTLMNQ
M PP AEL KQLDELLNAGFI PAKA YGA VLFQKKKDGSLRLCIDYRVLNKLT G EPKTT VT+YGAFEFL+MPFGLTNA TFCTLMNQ
Subjt: MTPPALAELRKQLDELLNAGFIGPAKAPYGASVLFQKKKDGSLRLCIDYRVLNKLT-------GDEPKTTCVTKYGAFEFLVMPFGLTNALATFCTLMNQ
Query: VFHEYLDKFVVVYLDDIVVYSTTMEDHRDHLQKVFQKLKENQLYVKIEKLGWQKGRLLRYATAQYRNQSQSYAPSLG
VFHEYLDKFVVVYLDDIVVYSTTME+HRDHLQK + +L W+KGRLLRYAT Q +NQS+SYAPS G
Subjt: VFHEYLDKFVVVYLDDIVVYSTTMEDHRDHLQKVFQKLKENQLYVKIEKLGWQKGRLLRYATAQYRNQSQSYAPSLG
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| A0A5D3DY42 Reverse transcriptase | 5.0e-64 | 70.9 | Show/hide |
Query: MTPPALAELRKQLDELLNAGFIGPAKAPYGASVLFQKKKDGSLRLCIDYRVLNKLT---------------------------------------GDEPK
M PP LAELRKQLDELLNAGFI PAKAPYGA VLFQKKKDGSLRLCIDYR LNKLT GDEPK
Subjt: MTPPALAELRKQLDELLNAGFIGPAKAPYGASVLFQKKKDGSLRLCIDYRVLNKLT---------------------------------------GDEPK
Query: TTCVTKYGAFEFLVMPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEDHRDHLQKVFQKLKENQLYVKIEKLGWQKGRL
TTCVT+YGAFEFLVMPFGLTNA ATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTME+HRDHLQKVFQKLKENQLYVK EK + + R+
Subjt: TTCVTKYGAFEFLVMPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEDHRDHLQKVFQKLKENQLYVKIEKLGWQKGRL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 1.4e-18 | 33.15 | Show/hide |
Query: ELRKQLDELLNAGFIGPAKAPYGASV-LFQKKKDGS----LRLCIDYRVLNKLT-GDE--------------------------------------PKTT
E+ Q+ ++LN G I + +PY + + + KK+D S R+ IDYR LN++T GD KT
Subjt: ELRKQLDELLNAGFIGPAKAPYGASV-LFQKKKDGS----LRLCIDYRVLNKLT-GDE--------------------------------------PKTT
Query: CVTKYGAFEFLVMPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEDHRDHLQKVFQKLKENQLYVKIEKLGWQK
TK+G +E+L MPFGL NA ATF MN + L+K +VYLDDI+V+ST++++H L VF+KL + L ++++K + K
Subjt: CVTKYGAFEFLVMPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEDHRDHLQKVFQKLKENQLYVKIEKLGWQK
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 4.4e-17 | 33.15 | Show/hide |
Query: ELRKQLDELLNAGFIGPAKAPYGASV-LFQKKKDGS----LRLCIDYRVLNKLT------------------------------------GDE---PKTT
E+ Q+ E+LN G I + +PY + + KK D S R+ IDYR LN++T DE KT
Subjt: ELRKQLDELLNAGFIGPAKAPYGASV-LFQKKKDGS----LRLCIDYRVLNKLT------------------------------------GDE---PKTT
Query: CVTKYGAFEFLVMPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEDHRDHLQKVFQKLKENQLYVKIEKLGWQK
TK G +E+L MPFGL NA ATF MN + L+K +VYLDDI+++ST++ +H + +Q VF KL + L ++++K + K
Subjt: CVTKYGAFEFLVMPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEDHRDHLQKVFQKLKENQLYVKIEKLGWQK
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| P31843 RNA-directed DNA polymerase homolog | 7.5e-25 | 50 | Show/hide |
Query: SLRLCIDYRVLNKLT---------------------------------------GDEPKTTCVTKYGAFEFLVMPFGLTNALATFCTLMNQVFHEYLDKF
SLR+CIDYR L K+T GDEPKTTCVT+YG+FEF VMPFGLTNALATFC LMN V +EYLD F
Subjt: SLRLCIDYRVLNKLT---------------------------------------GDEPKTTCVTKYGAFEFLVMPFGLTNALATFCTLMNQVFHEYLDKF
Query: VVVYLDDIVV---YSTTMEDHRDHLQKV
VVVYLDD+VV YS ++ +H HL+ V
Subjt: VVVYLDDIVV---YSTTMEDHRDHLQKV
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 1.7e-21 | 36.21 | Show/hide |
Query: ELRKQLDELLNAGFIGPAKAPYGASVLFQKKKDGSLRLCIDYRVLNKLTGDEP---------------------------------------KTTCVTKY
E+ K + +LL+ FI P+K+P + V+ KKDG+ RLC+DYR LNK T +P KT VT
Subjt: ELRKQLDELLNAGFIGPAKAPYGASVLFQKKKDGSLRLCIDYRVLNKLTGDEP---------------------------------------KTTCVTKY
Query: GAFEFLVMPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEDHRDHLQKVFQKLKENQLYVKIEK
G +E+ VMPFGL NA +TF M F + +FV VYLDDI+++S + E+H HL V ++LK L VK +K
Subjt: GAFEFLVMPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEDHRDHLQKVFQKLKENQLYVKIEK
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 1.7e-21 | 36.21 | Show/hide |
Query: ELRKQLDELLNAGFIGPAKAPYGASVLFQKKKDGSLRLCIDYRVLNKLTGDEP---------------------------------------KTTCVTKY
E+ K + +LL+ FI P+K+P + V+ KKDG+ RLC+DYR LNK T +P KT VT
Subjt: ELRKQLDELLNAGFIGPAKAPYGASVLFQKKKDGSLRLCIDYRVLNKLTGDEP---------------------------------------KTTCVTKY
Query: GAFEFLVMPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEDHRDHLQKVFQKLKENQLYVKIEK
G +E+ VMPFGL NA +TF M F + +FV VYLDDI+++S + E+H HL V ++LK L VK +K
Subjt: GAFEFLVMPFGLTNALATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEDHRDHLQKVFQKLKENQLYVKIEK
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