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Cmc07g0194561 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc07g0194561
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionBeta-galactosidase
Genome locationCMiso1.1chr07:17347256..17347618
RNA-Seq ExpressionCmc07g0194561
SyntenyCmc07g0194561
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0015074 - DNA integration (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0032456 - endocytic recycling (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005768 - endosome (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0005525 - GTP binding (molecular function)
GO:0016301 - kinase activity (molecular function)
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025138.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]3.0e-5492.56Show/hide
Query:  MSPPP-FEAQFGQQVCKLQKSLYGLKHSPRAWFDRFTIFVKSQGYSQGHSDHTLFIKVSETGKIAVLIVYVDDIVLSGDDQVEISQLKQRMGNEFEIKDL
        MSPPP FEAQFGQQVCKLQKSLYGLK SPRAWFDRFT FVKSQGYSQGHSDHTLF KVSETGKIAVLIVYVDDIVLSGDDQ EISQLKQR+GNEFEI+DL
Subjt:  MSPPP-FEAQFGQQVCKLQKSLYGLKHSPRAWFDRFTIFVKSQGYSQGHSDHTLFIKVSETGKIAVLIVYVDDIVLSGDDQVEISQLKQRMGNEFEIKDL

Query:  RNLKYFLGMEVARSKEGIFVS
         NLKYFLGMEVARSKEGI VS
Subjt:  RNLKYFLGMEVARSKEGIFVS

KAA0052212.1 Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Cucumis melo var. makuwa]2.6e-5391.67Show/hide
Query:  SPPP-FEAQFGQQVCKLQKSLYGLKHSPRAWFDRFTIFVKSQGYSQGHSDHTLFIKVSETGKIAVLIVYVDDIVLSGDDQVEISQLKQRMGNEFEIKDLR
        SPPP FEAQFGQ+VCKLQKSLYGLK SPRAWFDRFT FVKSQGYSQGHSDHTLF KVSETGKIAVLIVYVDDIVLSGDDQ EISQLKQRMGNEFEIK+L 
Subjt:  SPPP-FEAQFGQQVCKLQKSLYGLKHSPRAWFDRFTIFVKSQGYSQGHSDHTLFIKVSETGKIAVLIVYVDDIVLSGDDQVEISQLKQRMGNEFEIKDLR

Query:  NLKYFLGMEVARSKEGIFVS
        NLKYFLGME+ARSKEGI VS
Subjt:  NLKYFLGMEVARSKEGIFVS

KAA0067540.1 Beta-galactosidase [Cucumis melo var. makuwa]3.4e-5390.08Show/hide
Query:  MSPPP-FEAQFGQQVCKLQKSLYGLKHSPRAWFDRFTIFVKSQGYSQGHSDHTLFIKVSETGKIAVLIVYVDDIVLSGDDQVEISQLKQRMGNEFEIKDL
        MSPPP FEAQFGQQVCKLQKSLYGLK SPRAWFDRFT FVKSQGYSQGHSDHTLF K S+TGKIA+LIVYVDDIVL+GDDQ EISQLKQRMG+EFEIKDL
Subjt:  MSPPP-FEAQFGQQVCKLQKSLYGLKHSPRAWFDRFTIFVKSQGYSQGHSDHTLFIKVSETGKIAVLIVYVDDIVLSGDDQVEISQLKQRMGNEFEIKDL

Query:  RNLKYFLGMEVARSKEGIFVS
         NLKYFLGMEVARSKEGI VS
Subjt:  RNLKYFLGMEVARSKEGIFVS

TYK01779.1 Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Cucumis melo var. makuwa]2.6e-5391.67Show/hide
Query:  SPPP-FEAQFGQQVCKLQKSLYGLKHSPRAWFDRFTIFVKSQGYSQGHSDHTLFIKVSETGKIAVLIVYVDDIVLSGDDQVEISQLKQRMGNEFEIKDLR
        SPPP FEAQFGQ+VCKLQKSLYGLK SPRAWFDRFT FVKSQGYSQGHSDHTLF KVSETGKIAVLIVYVDDIVLSGDDQ EISQLKQRMGNEFEIK+L 
Subjt:  SPPP-FEAQFGQQVCKLQKSLYGLKHSPRAWFDRFTIFVKSQGYSQGHSDHTLFIKVSETGKIAVLIVYVDDIVLSGDDQVEISQLKQRMGNEFEIKDLR

Query:  NLKYFLGMEVARSKEGIFVS
        NLKYFLGME+ARSKEGI VS
Subjt:  NLKYFLGMEVARSKEGIFVS

TYK23097.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]3.0e-5492.56Show/hide
Query:  MSPPP-FEAQFGQQVCKLQKSLYGLKHSPRAWFDRFTIFVKSQGYSQGHSDHTLFIKVSETGKIAVLIVYVDDIVLSGDDQVEISQLKQRMGNEFEIKDL
        MSPPP FEAQFGQQVCKLQKSLYGLK SPRAWFDRFT FVKSQGYSQGHSDHTLF KVSETGKIAVLIVYVDDIVLSGDDQ EISQLKQR+GNEFEI+DL
Subjt:  MSPPP-FEAQFGQQVCKLQKSLYGLKHSPRAWFDRFTIFVKSQGYSQGHSDHTLFIKVSETGKIAVLIVYVDDIVLSGDDQVEISQLKQRMGNEFEIKDL

Query:  RNLKYFLGMEVARSKEGIFVS
         NLKYFLGMEVARSKEGI VS
Subjt:  RNLKYFLGMEVARSKEGIFVS

TrEMBL top hitse value%identityAlignment
A0A5A7SG80 Retrovirus-related Pol polyprotein from transposon TNT 1-941.5e-5492.56Show/hide
Query:  MSPPP-FEAQFGQQVCKLQKSLYGLKHSPRAWFDRFTIFVKSQGYSQGHSDHTLFIKVSETGKIAVLIVYVDDIVLSGDDQVEISQLKQRMGNEFEIKDL
        MSPPP FEAQFGQQVCKLQKSLYGLK SPRAWFDRFT FVKSQGYSQGHSDHTLF KVSETGKIAVLIVYVDDIVLSGDDQ EISQLKQR+GNEFEI+DL
Subjt:  MSPPP-FEAQFGQQVCKLQKSLYGLKHSPRAWFDRFTIFVKSQGYSQGHSDHTLFIKVSETGKIAVLIVYVDDIVLSGDDQVEISQLKQRMGNEFEIKDL

Query:  RNLKYFLGMEVARSKEGIFVS
         NLKYFLGMEVARSKEGI VS
Subjt:  RNLKYFLGMEVARSKEGIFVS

A0A5A7U8Y7 Cysteine-rich RLK (RECEPTOR-like protein kinase) 81.2e-5391.67Show/hide
Query:  SPPP-FEAQFGQQVCKLQKSLYGLKHSPRAWFDRFTIFVKSQGYSQGHSDHTLFIKVSETGKIAVLIVYVDDIVLSGDDQVEISQLKQRMGNEFEIKDLR
        SPPP FEAQFGQ+VCKLQKSLYGLK SPRAWFDRFT FVKSQGYSQGHSDHTLF KVSETGKIAVLIVYVDDIVLSGDDQ EISQLKQRMGNEFEIK+L 
Subjt:  SPPP-FEAQFGQQVCKLQKSLYGLKHSPRAWFDRFTIFVKSQGYSQGHSDHTLFIKVSETGKIAVLIVYVDDIVLSGDDQVEISQLKQRMGNEFEIKDLR

Query:  NLKYFLGMEVARSKEGIFVS
        NLKYFLGME+ARSKEGI VS
Subjt:  NLKYFLGMEVARSKEGIFVS

A0A5A7VK49 Beta-galactosidase1.6e-5390.08Show/hide
Query:  MSPPP-FEAQFGQQVCKLQKSLYGLKHSPRAWFDRFTIFVKSQGYSQGHSDHTLFIKVSETGKIAVLIVYVDDIVLSGDDQVEISQLKQRMGNEFEIKDL
        MSPPP FEAQFGQQVCKLQKSLYGLK SPRAWFDRFT FVKSQGYSQGHSDHTLF K S+TGKIA+LIVYVDDIVL+GDDQ EISQLKQRMG+EFEIKDL
Subjt:  MSPPP-FEAQFGQQVCKLQKSLYGLKHSPRAWFDRFTIFVKSQGYSQGHSDHTLFIKVSETGKIAVLIVYVDDIVLSGDDQVEISQLKQRMGNEFEIKDL

Query:  RNLKYFLGMEVARSKEGIFVS
         NLKYFLGMEVARSKEGI VS
Subjt:  RNLKYFLGMEVARSKEGIFVS

A0A5D3BUK5 Cysteine-rich RLK (RECEPTOR-like protein kinase) 81.2e-5391.67Show/hide
Query:  SPPP-FEAQFGQQVCKLQKSLYGLKHSPRAWFDRFTIFVKSQGYSQGHSDHTLFIKVSETGKIAVLIVYVDDIVLSGDDQVEISQLKQRMGNEFEIKDLR
        SPPP FEAQFGQ+VCKLQKSLYGLK SPRAWFDRFT FVKSQGYSQGHSDHTLF KVSETGKIAVLIVYVDDIVLSGDDQ EISQLKQRMGNEFEIK+L 
Subjt:  SPPP-FEAQFGQQVCKLQKSLYGLKHSPRAWFDRFTIFVKSQGYSQGHSDHTLFIKVSETGKIAVLIVYVDDIVLSGDDQVEISQLKQRMGNEFEIKDLR

Query:  NLKYFLGMEVARSKEGIFVS
        NLKYFLGME+ARSKEGI VS
Subjt:  NLKYFLGMEVARSKEGIFVS

A0A5D3DHC0 Retrovirus-related Pol polyprotein from transposon TNT 1-941.5e-5492.56Show/hide
Query:  MSPPP-FEAQFGQQVCKLQKSLYGLKHSPRAWFDRFTIFVKSQGYSQGHSDHTLFIKVSETGKIAVLIVYVDDIVLSGDDQVEISQLKQRMGNEFEIKDL
        MSPPP FEAQFGQQVCKLQKSLYGLK SPRAWFDRFT FVKSQGYSQGHSDHTLF KVSETGKIAVLIVYVDDIVLSGDDQ EISQLKQR+GNEFEI+DL
Subjt:  MSPPP-FEAQFGQQVCKLQKSLYGLKHSPRAWFDRFTIFVKSQGYSQGHSDHTLFIKVSETGKIAVLIVYVDDIVLSGDDQVEISQLKQRMGNEFEIKDL

Query:  RNLKYFLGMEVARSKEGIFVS
         NLKYFLGMEVARSKEGI VS
Subjt:  RNLKYFLGMEVARSKEGIFVS

SwissProt top hitse value%identityAlignment
P04146 Copia protein2.5e-1132.11Show/hide
Query:  VCKLQKSLYGLKHSPRAWFDRFTIFVKSQGYSQGHSDHTLFI--KVSETGKIAVLIVYVDDIVLSGDDQVEISQLKQRMGNEFEIKDLRNLKYFLGMEVA
        VCKL K++YGLK + R WF+ F   +K   +     D  ++I  K +    I VL+ YVDD+V++  D   ++  K+ +  +F + DL  +K+F+G+ + 
Subjt:  VCKLQKSLYGLKHSPRAWFDRFTIFVKSQGYSQGHSDHTLFI--KVSETGKIAVLIVYVDDIVLSGDDQVEISQLKQRMGNEFEIKDLRNLKYFLGMEVA

Query:  RSKEGIFVS
          ++ I++S
Subjt:  RSKEGIFVS

P0C2J7 Transposon Ty4-H Gag-Pol polyprotein6.1e-0529.76Show/hide
Query:  VCKLQKSLYGLKHSPRAWFDRFTIFVKSQGYSQGHSDHTLFIKVSETGKIAVLIVYVDDIVLSGDDQVEISQLKQRMGNEFEIK
        V KL K+LYGLK SP+ W D    ++   G         L+       K  ++ VYVDD V++  ++  + +   ++ + FE+K
Subjt:  VCKLQKSLYGLKHSPRAWFDRFTIFVKSQGYSQGHSDHTLFIKVSETGKIAVLIVYVDDIVLSGDDQVEISQLKQRMGNEFEIK

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-944.0e-1740.59Show/hide
Query:  VCKLQKSLYGLKHSPRAWFDRFTIFVKSQGYSQGHSDHTLFIKVSETGKIAVLIVYVDDIVLSGDDQVEISQLKQRMGNEFEIKDLRNLKYFLGMEVARS
        VCKL KSLYGLK +PR W+ +F  F+KSQ Y + +SD  ++ K        +L++YVDD+++ G D+  I++LK  +   F++KDL   +  LGM++ R 
Subjt:  VCKLQKSLYGLKHSPRAWFDRFTIFVKSQGYSQGHSDHTLFIKVSETGKIAVLIVYVDDIVLSGDDQVEISQLKQRMGNEFEIKDLRNLKYFLGMEVARS

Query:  K
        +
Subjt:  K

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE15.8e-1638.21Show/hide
Query:  MSPPP--FEAQFGQQVCKLQKSLYGLKHSPRAWFDRFTIFVKSQGYSQGHSDHTLFIKVSETGK-IAVLIVYVDDIVLSGDDQVEISQLKQRMGNEFEIK
        MS PP   +      VCKL+K+LYGLK +PRAW+     ++ + G+    SD +LF  V + GK I  ++VYVDDI+++G+D   +      +   F +K
Subjt:  MSPPP--FEAQFGQQVCKLQKSLYGLKHSPRAWFDRFTIFVKSQGYSQGHSDHTLFIKVSETGK-IAVLIVYVDDIVLSGDDQVEISQLKQRMGNEFEIK

Query:  DLRNLKYFLGMEVARSKEGIFVS
        D   L YFLG+E  R   G+ +S
Subjt:  DLRNLKYFLGMEVARSKEGIFVS

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.0e-1534.43Show/hide
Query:  MSPPP--FEAQFGQQVCKLQKSLYGLKHSPRAWFDRFTIFVKSQGYSQGHSDHTLFIKVSETGKIAVLIVYVDDIVLSGDDQVEISQLKQRMGNEFEIKD
        MS PP   +      VC+L+K++YGLK +PRAW+     ++ + G+    SD +LF+ +     I  ++VYVDDI+++G+D V +      +   F +K+
Subjt:  MSPPP--FEAQFGQQVCKLQKSLYGLKHSPRAWFDRFTIFVKSQGYSQGHSDHTLFIKVSETGKIAVLIVYVDDIVLSGDDQVEISQLKQRMGNEFEIKD

Query:  LRNLKYFLGMEVARSKEGIFVS
          +L YFLG+E  R  +G+ +S
Subjt:  LRNLKYFLGMEVARSKEGIFVS

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 83.9e-2343.33Show/hide
Query:  PPPFEAQFGQQ-----VCKLQKSLYGLKHSPRAWFDRFTIFVKSQGYSQGHSDHTLFIKVSETGKIAVLIVYVDDIVLSGDDQVEISQLKQRMGNEFEIK
        PP + A+ G       VC L+KS+YGLK + R WF +F++ +   G+ Q HSDHT F+K++ T  + VL VYVDDI++  ++   + +LK ++ + F+++
Subjt:  PPPFEAQFGQQ-----VCKLQKSLYGLKHSPRAWFDRFTIFVKSQGYSQGHSDHTLFIKVSETGKIAVLIVYVDDIVLSGDDQVEISQLKQRMGNEFEIK

Query:  DLRNLKYFLGMEVARSKEGI
        DL  LKYFLG+E+ARS  GI
Subjt:  DLRNLKYFLGMEVARSKEGI

ATMG00810.1 DNA/RNA polymerases superfamily protein2.8e-0536.36Show/hide
Query:  LIVYVDDIVLSGDDQVEISQLKQRMGNEFEIKDLRNLKYFLGMEVARSKEGIFVS
        L++YVDDI+L+G     ++ L  ++ + F +KDL  + YFLG+++     G+F+S
Subjt:  LIVYVDDIVLSGDDQVEISQLKQRMGNEFEIKDLRNLKYFLGMEVARSKEGIFVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCCTCCACCTTTTGAAGCACAGTTCGGTCAACAGGTTTGTAAACTCCAGAAATCCTTATATGGTCTGAAACATTCACCCAGAGCATGGTTTGACAGATTT
ACTATTTTTGTCAAGTCCCAAGGATACAGTCAGGGACACTCTGATCACACTTTATTTATAAAAGTTTCCGAGACAGGGAAGATTGCAGTTCTGATAGTTTATGTG
GATGACATCGTTTTGTCTGGAGATGATCAGGTAGAAATTAGTCAACTTAAGCAGAGAATGGGTAATGAATTTGAAATCAAGGATTTGAGAAATCTGAAATATTTC
CTTGGAATGGAGGTGGCCAGATCTAAAGAAGGCATCTTCGTGTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCCCTCCACCTTTTGAAGCACAGTTCGGTCAACAGGTTTGTAAACTCCAGAAATCCTTATATGGTCTGAAACATTCACCCAGAGCATGGTTTGACAGATTT
ACTATTTTTGTCAAGTCCCAAGGATACAGTCAGGGACACTCTGATCACACTTTATTTATAAAAGTTTCCGAGACAGGGAAGATTGCAGTTCTGATAGTTTATGTG
GATGACATCGTTTTGTCTGGAGATGATCAGGTAGAAATTAGTCAACTTAAGCAGAGAATGGGTAATGAATTTGAAATCAAGGATTTGAGAAATCTGAAATATTTC
CTTGGAATGGAGGTGGCCAGATCTAAAGAAGGCATCTTCGTGTCTTAG
Protein sequenceShow/hide protein sequence
MSPPPFEAQFGQQVCKLQKSLYGLKHSPRAWFDRFTIFVKSQGYSQGHSDHTLFIKVSETGKIAVLIVYVDDIVLSGDDQVEISQLKQRMGNEFEIKDLRNLKYF
LGMEVARSKEGIFVS