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Cmc07g0194801 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc07g0194801
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRibonuclease T(2)
Genome locationCMiso1.1chr07:17689076..17690565
RNA-Seq ExpressionCmc07g0194801
SyntenyCmc07g0194801
Gene Ontology termsGO:0006401 - RNA catabolic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016020 - membrane (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0033897 - ribonuclease T2 activity (molecular function)
InterPro domainsIPR001568 - Ribonuclease T2-like
IPR018188 - Ribonuclease T2, His active site 1
IPR036430 - Ribonuclease T2-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061176.1 ribonuclease 2-like [Cucumis melo var. makuwa]2.6e-79100Show/hide
Query:  MASFSIKGKPMVFLFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASFN
        MASFSIKGKPMVFLFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASFN
Subjt:  MASFSIKGKPMVFLFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASFN

Query:  ENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAHE
        ENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAHE
Subjt:  ENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAHE

KAE8649307.1 hypothetical protein Csa_015411 [Cucumis sativus]7.1e-6985Show/hide
Query:  MASFSIKGKPMVFLFLI-VELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASF
        MAS SIK K MVF+ ++ ++LLTVVFGFSAEAPS SEQREFDYFVLALQWP +SCKN GKCCPSNACCRGA+SPTEFTIHGLWPQYNEKGWPSCCTDASF
Subjt:  MASFSIKGKPMVFLFLI-VELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASF

Query:  NENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAHEVQ
        NENEI IL EDIQKYWPTYRCGT+STCH+TKGSFWAHE +
Subjt:  NENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAHEVQ

XP_004137162.1 ribonuclease 2 [Cucumis sativus]7.1e-6985Show/hide
Query:  MASFSIKGKPMVFLFLI-VELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASF
        MAS SIK K MVF+ ++ ++LLTVVFGFSAEAPS SEQREFDYFVLALQWP +SCKN GKCCPSNACCRGA+SPTEFTIHGLWPQYNEKGWPSCCTDASF
Subjt:  MASFSIKGKPMVFLFLI-VELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASF

Query:  NENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAHEVQ
        NENEI IL EDIQKYWPTYRCGT+STCH+TKGSFWAHE +
Subjt:  NENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAHEVQ

XP_008462866.1 PREDICTED: ribonuclease 2-like [Cucumis melo]1.5e-7998.56Show/hide
Query:  MASFSIKGKPMVFLFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASFN
        MASFSIKGKPMVFLFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASFN
Subjt:  MASFSIKGKPMVFLFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASFN

Query:  ENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAHEVQ
        ENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAHE +
Subjt:  ENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAHEVQ

XP_038876700.1 ribonuclease 2-like [Benincasa hispida]1.2e-6882.98Show/hide
Query:  MASFSIKGKPMV--FLFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDAS
        MASFSIK KPM    +FL+++LL V FGF+A APSGSEQREFDYFVLALQWPATSCKN GKCCP+N CCRG DSPTEFTIHGLWPQYN++GWPSCCTDA+
Subjt:  MASFSIKGKPMV--FLFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDAS

Query:  FNENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAHEVQ
        FNENEI ILAEDIQKYWPTYRCGT+STCHRTKGSFWAHE +
Subjt:  FNENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAHEVQ

TrEMBL top hitse value%identityAlignment
A0A0A0L0P9 Ribonuclease T(2)3.4e-6985Show/hide
Query:  MASFSIKGKPMVFLFLI-VELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASF
        MAS SIK K MVF+ ++ ++LLTVVFGFSAEAPS SEQREFDYFVLALQWP +SCKN GKCCPSNACCRGA+SPTEFTIHGLWPQYNEKGWPSCCTDASF
Subjt:  MASFSIKGKPMVFLFLI-VELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASF

Query:  NENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAHEVQ
        NENEI IL EDIQKYWPTYRCGT+STCH+TKGSFWAHE +
Subjt:  NENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAHEVQ

A0A1S3CHX1 Ribonuclease T(2)7.4e-8098.56Show/hide
Query:  MASFSIKGKPMVFLFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASFN
        MASFSIKGKPMVFLFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASFN
Subjt:  MASFSIKGKPMVFLFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASFN

Query:  ENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAHEVQ
        ENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAHE +
Subjt:  ENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAHEVQ

A0A5A7V3T6 Ribonuclease T(2)1.3e-79100Show/hide
Query:  MASFSIKGKPMVFLFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASFN
        MASFSIKGKPMVFLFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASFN
Subjt:  MASFSIKGKPMVFLFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASFN

Query:  ENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAHE
        ENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAHE
Subjt:  ENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAHE

A0A5D3E236 Ribonuclease T(2)5.9e-6996.83Show/hide
Query:  MASFSIKGKPMVFLFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASFN
        MASFSIKGKPMVFLFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASFN
Subjt:  MASFSIKGKPMVFLFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASFN

Query:  ENEIGILAEDIQKYWPTYRCGTSSTC
        ENEIGILAEDIQKYWPTYRC    TC
Subjt:  ENEIGILAEDIQKYWPTYRCGTSSTC

A0A6J1EA39 Ribonuclease T(2)1.5e-6175.52Show/hide
Query:  MASFSIKGKPMV----FLFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTD
        MASFSIK  PMV       L+++L+ VV   +AE PSG EQREFDYFVLALQWPATSCKN GKCCP+N CCRGADSPTEFTIHGLWPQYNEKGWPSCCTD
Subjt:  MASFSIKGKPMV----FLFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTD

Query:  ASFNENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAHEVQ
        A F++NEI +L EDI+KYWPTYRCGT+S CH TKGSFWAHE +
Subjt:  ASFNENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAHEVQ

SwissProt top hitse value%identityAlignment
P42813 Ribonuclease 11.2e-1338.1Show/hide
Query:  LFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDAS--FNENEIGILAEDI
        L LI  L+ +   FSA     S   +FD+F    QWP + C    KCC  N+    AD    F IHGLWP Y +  +PS C DAS  F+ + I  L   +
Subjt:  LFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDAS--FNENEIGILAEDI

Query:  QKYWPTYRCGTSSTCHRTKGSFWAHE
        +K WPT  C + S       +FW HE
Subjt:  QKYWPTYRCGTSSTCHRTKGSFWAHE

P42814 Ribonuclease 24.0e-3859.41Show/hide
Query:  QREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASFNENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAH
        QREFDYF L+LQWP T C+    CC  NACCRG+D+PT+FTIHGLWP YN+  WPSCC  + F E EI  L + ++KYWP+  CG+ S+C+  KGSFW H
Subjt:  QREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASFNENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAH

Query:  E
        E
Subjt:  E

P42815 Ribonuclease 38.0e-1536.63Show/hide
Query:  REFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWP-SCCTDASFNENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAH
        ++FD+F   LQWP   C +   CC        AD    F IHGLWP Y   GWP +C  D+ F++  +  L  D+Q+ WPT  C ++         FW H
Subjt:  REFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWP-SCCTDASFNENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAH

Query:  E
        E
Subjt:  E

P80022 Extracellular ribonuclease LE2.2e-1232Show/hide
Query:  LFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPS-CCTDASFNENEIGILAEDIQ
        LFLI+ ++T        A      ++FD+F    QWP + C     CC        AD    F IHGLWP  N+  +PS C  ++ +++++I  L   +Q
Subjt:  LFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPS-CCTDASFNENEIGILAEDIQ

Query:  KYWPTYRCGTSSTCHRTKGSFWAHE
        + WPT  C + S       +FW+HE
Subjt:  KYWPTYRCGTSSTCHRTKGSFWAHE

P80196 Intracellular ribonuclease LX8.9e-1433.66Show/hide
Query:  REFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWP-SCCTDASFNENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAH
        ++FD+F    QWPA+ C     CC             +F+IHGLWP Y +  WP +C  ++S +E+E   L   ++K WP+  C +S         FW+H
Subjt:  REFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWP-SCCTDASFNENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAH

Query:  E
        E
Subjt:  E

Arabidopsis top hitse value%identityAlignment
AT1G14220.1 Ribonuclease T2 family protein8.8e-1738.24Show/hide
Query:  QREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPS-CCTDASFNENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWA
        Q +FD+F   LQWP   C  +  CC   +    AD    F IHGLWP YN   WPS C  D+ F+ ++I  L   ++K WPT  C ++        +FW 
Subjt:  QREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPS-CCTDASFNENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWA

Query:  HE
        HE
Subjt:  HE

AT1G26820.1 ribonuclease 35.7e-1636.63Show/hide
Query:  REFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWP-SCCTDASFNENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAH
        ++FD+F   LQWP   C +   CC        AD    F IHGLWP Y   GWP +C  D+ F++  +  L  D+Q+ WPT  C ++         FW H
Subjt:  REFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWP-SCCTDASFNENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAH

Query:  E
        E
Subjt:  E

AT2G02990.1 ribonuclease 18.2e-1538.1Show/hide
Query:  LFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDAS--FNENEIGILAEDI
        L LI  L+ +   FSA     S   +FD+F    QWP + C    KCC  N+    AD    F IHGLWP Y +  +PS C DAS  F+ + I  L   +
Subjt:  LFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDAS--FNENEIGILAEDI

Query:  QKYWPTYRCGTSSTCHRTKGSFWAHE
        +K WPT  C + S       +FW HE
Subjt:  QKYWPTYRCGTSSTCHRTKGSFWAHE

AT2G39780.1 ribonuclease 22.8e-3959.41Show/hide
Query:  QREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASFNENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAH
        QREFDYF L+LQWP T C+    CC  NACCRG+D+PT+FTIHGLWP YN+  WPSCC  + F E EI  L + ++KYWP+  CG+ S+C+  KGSFW H
Subjt:  QREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASFNENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAH

Query:  E
        E
Subjt:  E

AT2G39780.2 ribonuclease 22.8e-3959.41Show/hide
Query:  QREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASFNENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAH
        QREFDYF L+LQWP T C+    CC  NACCRG+D+PT+FTIHGLWP YN+  WPSCC  + F E EI  L + ++KYWP+  CG+ S+C+  KGSFW H
Subjt:  QREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASFNENEIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAH

Query:  E
        E
Subjt:  E


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTTTCTCCATTAAAGGCAAGCCCATGGTGTTTCTTTTTCTTATTGTTGAGCTGCTGACAGTGGTGTTCGGGTTCTCGGCGGAGGCCCCAAGCGGCAGTGAGCA
GAGGGAATTTGATTACTTTGTGTTGGCTCTTCAATGGCCAGCTACTTCTTGCAAAAACGCTGGCAAGTGTTGCCCATCCAACGCCTGCTGCCGTGGAGCTGATTCTCCCA
CTGAATTTACAATCCACGGATTGTGGCCCCAGTATAACGAGAAAGGATGGCCATCTTGTTGCACTGATGCAAGCTTTAATGAAAATGAGATTGGTATCTTGGCTGAGGAT
ATTCAAAAGTATTGGCCGACTTACCGATGTGGTACTTCGTCCACGTGCCATAGGACCAAGGGATCATTTTGGGCCCATGAGGTTCAAATTATTCTCCCTTTTACTCCTTT
CCTTAAATAG
mRNA sequenceShow/hide mRNA sequence
CACCAGCTTCCTAATTTCCATTTAAAATGGCTTCTTTCTCCATTAAAGGCAAGCCCATGGTGTTTCTTTTTCTTATTGTTGAGCTGCTGACAGTGGTGTTCGGGTTCTCG
GCGGAGGCCCCAAGCGGCAGTGAGCAGAGGGAATTTGATTACTTTGTGTTGGCTCTTCAATGGCCAGCTACTTCTTGCAAAAACGCTGGCAAGTGTTGCCCATCCAACGC
CTGCTGCCGTGGAGCTGATTCTCCCACTGAATTTACAATCCACGGATTGTGGCCCCAGTATAACGAGAAAGGATGGCCATCTTGTTGCACTGATGCAAGCTTTAATGAAA
ATGAGATTGGTATCTTGGCTGAGGATATTCAAAAGTATTGGCCGACTTACCGATGTGGTACTTCGTCCACGTGCCATAGGACCAAGGGATCATTTTGGGCCCATGAGGTT
CAAATTATTCTCCCTTTTACTCCTTTCCTTAAATAGCTCATCAATATCAAAGTTTTGAGACTGACA
Protein sequenceShow/hide protein sequence
MASFSIKGKPMVFLFLIVELLTVVFGFSAEAPSGSEQREFDYFVLALQWPATSCKNAGKCCPSNACCRGADSPTEFTIHGLWPQYNEKGWPSCCTDASFNENEIGILAED
IQKYWPTYRCGTSSTCHRTKGSFWAHEVQIILPFTPFLK