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Cmc07g0194841 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc07g0194841
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionDEAD-box ATP-dependent RNA helicase 32
Genome locationCMiso1.1chr07:17749784..17751283
RNA-Seq ExpressionCmc07g0194841
SyntenyCmc07g0194841
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033961.1 DEAD-box ATP-dependent RNA helicase 32 [Cucumis melo var. makuwa]7.4e-1453Show/hide
Query:  MIRIKLIGEFLLSTREYLVWLKSP------------------------------------------GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
        MIRIKLIGEFLLSTREYLVWLKSP                                          GEGKGRGK+A  REG VTCHM TQFCFRVYVSVF
Subjt:  MIRIKLIGEFLLSTREYLVWLKSP------------------------------------------GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF

KAA0045385.1 hypothetical protein E6C27_scaffold442G00010 [Cucumis melo var. makuwa]1.2e-1167.27Show/hide
Query:  IKLIGEFLLSTREYLVWLKSPGEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
        I +I       R  +V +  PGEGKGRGKLASD+EGSVTCHMGTQFCFRVYV+VF
Subjt:  IKLIGEFLLSTREYLVWLKSPGEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF

KAA0051087.1 transposase [Cucumis melo var. makuwa]4.1e-1245.87Show/hide
Query:  IKLIGEFLLSTREYLVWLKS-------------------------------------------------PG-----EGKGRGKLASDREGSVTCHMGTQF
        IKLIGEFLLS REY VWLKS                                                 PG     EGKGRGKLASD+EGSVTCHMGTQF
Subjt:  IKLIGEFLLSTREYLVWLKS-------------------------------------------------PG-----EGKGRGKLASDREGSVTCHMGTQF

Query:  CFRVYVSVF
        C+R YVSVF
Subjt:  CFRVYVSVF

KAA0063966.1 hypothetical protein E6C27_scaffold616G001210 [Cucumis melo var. makuwa]7.7e-1185.37Show/hide
Query:  LVWLKSPGEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
        +V +   GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
Subjt:  LVWLKSPGEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF

TYJ98810.1 hypothetical protein E5676_scaffold703G00090 [Cucumis melo var. makuwa]1.3e-10100Show/hide
Query:  GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
        GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
Subjt:  GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF

TrEMBL top hitse value%identityAlignment
A0A5A7SWX3 DEAD-box ATP-dependent RNA helicase 323.6e-1453Show/hide
Query:  MIRIKLIGEFLLSTREYLVWLKSP------------------------------------------GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
        MIRIKLIGEFLLSTREYLVWLKSP                                          GEGKGRGK+A  REG VTCHM TQFCFRVYVSVF
Subjt:  MIRIKLIGEFLLSTREYLVWLKSP------------------------------------------GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF

A0A5A7TVG7 Uncharacterized protein5.7e-1267.27Show/hide
Query:  IKLIGEFLLSTREYLVWLKSPGEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
        I +I       R  +V +  PGEGKGRGKLASD+EGSVTCHMGTQFCFRVYV+VF
Subjt:  IKLIGEFLLSTREYLVWLKSPGEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF

A0A5A7VC05 Uncharacterized protein3.7e-1185.37Show/hide
Query:  LVWLKSPGEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
        +V +   GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
Subjt:  LVWLKSPGEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF

A0A5A7VJ46 Uncharacterized protein6.3e-11100Show/hide
Query:  GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
        GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF
Subjt:  GEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF

A0A5D3CKP0 Transposase2.0e-1245.87Show/hide
Query:  IKLIGEFLLSTREYLVWLKS-------------------------------------------------PG-----EGKGRGKLASDREGSVTCHMGTQF
        IKLIGEFLLS REY VWLKS                                                 PG     EGKGRGKLASD+EGSVTCHMGTQF
Subjt:  IKLIGEFLLSTREYLVWLKS-------------------------------------------------PG-----EGKGRGKLASDREGSVTCHMGTQF

Query:  CFRVYVSVF
        C+R YVSVF
Subjt:  CFRVYVSVF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTAGGATCAAGTTAATTGGAGAATTTTTACTGTCAACTAGGGAGTACCTTGTTTGGCTAAAATCTCCAGGCGAAGGTAAAGGTAGAGGAAAGCTGGCGAGCGACAG
AGAAGGATCCGTGACATGCCATATGGGGACTCAGTTTTGCTTCCGCGTTTATGTTTCAGTGTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTAGGATCAAGTTAATTGGAGAATTTTTACTGTCAACTAGGGAGTACCTTGTTTGGCTAAAATCTCCAGGCGAAGGTAAAGGTAGAGGAAAGCTGGCGAGCGACAG
AGAAGGATCCGTGACATGCCATATGGGGACTCAGTTTTGCTTCCGCGTTTATGTTTCAGTGTTTTAATATTCCATTTTTAATAAAAATTTATTCTTCCCTCGTTTCAAAA
AAGTGTCTCTTGTCATTGTTCCCTTTTGGTAACGACCTCAGCTTAGTATAAAGAGTTGGGTCGTTACAGTTTATAAGTAGGACTTCAAGCATATCAAACGCATTTAATCA
ATCAAGTGTATGAGTGAAAAATACTTAGTGTATCTACAGTACATTAGGTGTATCTAACATATAACGTGTATCAACGTATCAAATTTGTTGAGTGGACCAATGAAACATAA
TAAGTTTATTAGCAGTGCATCGAACGTATTAAACTTATCAATGAAGCACTTAAGTGTATAAGGATCGAAAGGGTATCGAGTGTTTCAAATAGAATCAATTGCAAGGAGTA
TCATCAAGGTGTTTTAGGTGTATCAAAAGGTATCAAGTGTATCAAGTTCCAAAGTTTATCAAGAAGTATATCAAATGTATATATCAAGTGTATCAAAGAATATCAGGTGT
ATCAGGGGATGTTATGTGTGTTATATGTATCAGGTATATCAAATGTGTATCAGTAACGAAAGCATTTGTGATATTTTACATCTTGTATATGTGGATTAGACTTTGTTTTT
GCCATTTTTGCAAACAATA
Protein sequenceShow/hide protein sequence
MIRIKLIGEFLLSTREYLVWLKSPGEGKGRGKLASDREGSVTCHMGTQFCFRVYVSVF