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Cmc07g0195151 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc07g0195151
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionExpansin
Genome locationCMiso1.1chr07:18227035..18227565
RNA-Seq ExpressionCmc07g0195151
SyntenyCmc07g0195151
Gene Ontology termsGO:0009653 - anatomical structure morphogenesis (biological process)
GO:0009664 - plant-type cell wall organization (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR007112 - Expansin/pollen allergen, DPBB domain
IPR007118 - Expansin/Lol pI
IPR036908 - RlpA-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057643.1 expansin-A22-like [Cucumis melo var. makuwa]3.3e-3498.65Show/hide
Query:  MLNSSNNFVLWLGFVAIFGQAMGSRHIHSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALST
        MLNSSNNFVLWLGFVAIFGQAMGSRHIHSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAAL T
Subjt:  MLNSSNNFVLWLGFVAIFGQAMGSRHIHSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALST

KGN53632.1 hypothetical protein Csa_014415 [Cucumis sativus]2.5e-3483.91Show/hide
Query:  MLNSSNNFVLWLGFVAIFGQAMGSRHIHSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF
        ML SS+N VLWLGFVAIFG+ MGSR I +IDTTWY+AHATFYGD+SG +TMQGACGYGNLF+QGYGLATAALSTALFNNGG CGACF
Subjt:  MLNSSNNFVLWLGFVAIFGQAMGSRHIHSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF

TYK19525.1 expansin-A22-like [Cucumis melo var. makuwa]3.9e-43100Show/hide
Query:  MLNSSNNFVLWLGFVAIFGQAMGSRHIHSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF
        MLNSSNNFVLWLGFVAIFGQAMGSRHIHSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF
Subjt:  MLNSSNNFVLWLGFVAIFGQAMGSRHIHSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF

XP_008452127.1 PREDICTED: expansin-A22-like [Cucumis melo]1.3e-30100Show/hide
Query:  MGSRHIHSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF
        MGSRHIHSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF
Subjt:  MGSRHIHSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF

XP_022144456.1 expansin-A22-like [Momordica charantia]5.5e-2975.82Show/hide
Query:  MLNSSNNFVLWLGFVAIFGQAMGSRHI----HSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF
        M N SNN +L L F+AIF QAMGSR +     SIDTTWYD  ATFYGDMSG++TMQGACGYGNLFEQGYGL TAALSTALFNNG  CGACF
Subjt:  MLNSSNNFVLWLGFVAIFGQAMGSRHI----HSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF

TrEMBL top hitse value%identityAlignment
A0A0A0KZ27 Expansin1.2e-3483.91Show/hide
Query:  MLNSSNNFVLWLGFVAIFGQAMGSRHIHSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF
        ML SS+N VLWLGFVAIFG+ MGSR I +IDTTWY+AHATFYGD+SG +TMQGACGYGNLF+QGYGLATAALSTALFNNGG CGACF
Subjt:  MLNSSNNFVLWLGFVAIFGQAMGSRHIHSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF

A0A1S3BT65 Expansin6.3e-31100Show/hide
Query:  MGSRHIHSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF
        MGSRHIHSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF
Subjt:  MGSRHIHSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF

A0A5A7UP64 Expansin1.6e-3498.65Show/hide
Query:  MLNSSNNFVLWLGFVAIFGQAMGSRHIHSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALST
        MLNSSNNFVLWLGFVAIFGQAMGSRHIHSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAAL T
Subjt:  MLNSSNNFVLWLGFVAIFGQAMGSRHIHSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALST

A0A5D3D7L0 Expansin1.9e-43100Show/hide
Query:  MLNSSNNFVLWLGFVAIFGQAMGSRHIHSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF
        MLNSSNNFVLWLGFVAIFGQAMGSRHIHSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF
Subjt:  MLNSSNNFVLWLGFVAIFGQAMGSRHIHSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF

A0A6J1CTG4 Expansin2.7e-2975.82Show/hide
Query:  MLNSSNNFVLWLGFVAIFGQAMGSRHI----HSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF
        M N SNN +L L F+AIF QAMGSR +     SIDTTWYD  ATFYGDMSG++TMQGACGYGNLFEQGYGL TAALSTALFNNG  CGACF
Subjt:  MLNSSNNFVLWLGFVAIFGQAMGSRHI----HSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF

SwissProt top hitse value%identityAlignment
O80622 Expansin-A151.6e-1861.64Show/hide
Query:  VAIFGQAMGSRHIHSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF
        +A+F  A     +H  D  W +AHATFYG    S TM GACGYGNL+ QGYG  TAALSTALFNNG +CGACF
Subjt:  VAIFGQAMGSRHIHSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF

Q9FL77 Expansin-A253.7e-2071.67Show/hide
Query:  HSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF
        + +D++WYDA ATFYGD+ G +T QGACGYG+LF+QGYGL TAALSTALFN G TCGAC+
Subjt:  HSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF

Q9FL78 Putative expansin-A262.0e-2177.97Show/hide
Query:  SIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF
        ++D  WYDA ATFYGD+ G DT QGACGYGNLF QGYGLATAALSTALFN+G TCGAC+
Subjt:  SIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF

Q9FL79 Expansin-A233.7e-2071.67Show/hide
Query:  HSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF
        + +D++WYDA ATFYGD+ G +T QGACGYG+LF+QGYGL TAALSTALFN G TCGAC+
Subjt:  HSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF

Q9FL80 Expansin-A224.0e-2279.66Show/hide
Query:  SIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF
        ++DT WYDA ATFYGD+ G DT QGACGYGNLF QGYGLATAALSTALFN+G TCGAC+
Subjt:  SIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF

Arabidopsis top hitse value%identityAlignment
AT2G03090.1 expansin A151.1e-1961.64Show/hide
Query:  VAIFGQAMGSRHIHSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF
        +A+F  A     +H  D  W +AHATFYG    S TM GACGYGNL+ QGYG  TAALSTALFNNG +CGACF
Subjt:  VAIFGQAMGSRHIHSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF

AT5G39270.1 expansin A222.8e-2379.66Show/hide
Query:  SIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF
        ++DT WYDA ATFYGD+ G DT QGACGYGNLF QGYGLATAALSTALFN+G TCGAC+
Subjt:  SIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF

AT5G39280.1 expansin A232.6e-2171.67Show/hide
Query:  HSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF
        + +D++WYDA ATFYGD+ G +T QGACGYG+LF+QGYGL TAALSTALFN G TCGAC+
Subjt:  HSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF

AT5G39290.1 expansin A261.4e-2277.97Show/hide
Query:  SIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF
        ++D  WYDA ATFYGD+ G DT QGACGYGNLF QGYGLATAALSTALFN+G TCGAC+
Subjt:  SIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF

AT5G39300.1 expansin A252.6e-2171.67Show/hide
Query:  HSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF
        + +D++WYDA ATFYGD+ G +T QGACGYG+LF+QGYGL TAALSTALFN G TCGAC+
Subjt:  HSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAATTCGTCCAACAATTTTGTTCTGTGGTTGGGGTTTGTGGCCATTTTTGGTCAAGCCATGGGCTCTAGGCACATTCACTCCATTGATACCACATGGTATGATGC
TCATGCCACCTTCTATGGCGACATGTCCGGTTCCGACACTATGCAGGGAGCATGTGGGTATGGAAATCTATTCGAGCAAGGTTATGGGCTAGCAACAGCAGCATTAAGTA
CCGCATTGTTCAACAACGGTGGAACTTGCGGAGCATGCTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAATTCGTCCAACAATTTTGTTCTGTGGTTGGGGTTTGTGGCCATTTTTGGTCAAGCCATGGGCTCTAGGCACATTCACTCCATTGATACCACATGGTATGATGC
TCATGCCACCTTCTATGGCGACATGTCCGGTTCCGACACTATGCAGGGAGCATGTGGGTATGGAAATCTATTCGAGCAAGGTTATGGGCTAGCAACAGCAGCATTAAGTA
CCGCATTGTTCAACAACGGTGGAACTTGCGGAGCATGCTTTTGA
Protein sequenceShow/hide protein sequence
MLNSSNNFVLWLGFVAIFGQAMGSRHIHSIDTTWYDAHATFYGDMSGSDTMQGACGYGNLFEQGYGLATAALSTALFNNGGTCGACF