; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc07g0195201 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc07g0195201
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr07:18322675..18323805
RNA-Seq ExpressionCmc07g0195201
SyntenyCmc07g0195201
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK02449.1 F15O4.13 [Cucumis melo var. makuwa]1.4e-18596.69Show/hide
Query:  QEFNDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKIMVKY
        +EFNDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKI VKY
Subjt:  QEFNDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKIMVKY

Query:  RHPIPRLDDMLDELHGANLFSKIDLKSGYHQIRMHVGDAYEFMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFVVVYFDDIL
        RHPIPRLDDMLDELHGANLFSKIDLKSGYHQIR         MHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFVVVYFDDIL
Subjt:  RHPIPRLDDMLDELHGANLFSKIDLKSGYHQIRMHVGDAYEFMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFVVVYFDDIL

Query:  VYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTEL
        VYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTEL
Subjt:  VYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTEL

Query:  VKKHVKFEWKEKQENAFNELKEKLIKAPCLAL
        VKKHVKFEWKEKQENAFNELKEKLIKAPCLAL
Subjt:  VKKHVKFEWKEKQENAFNELKEKLIKAPCLAL

TYK04936.1 F15O4.13 [Cucumis melo var. makuwa]1.4e-18596.69Show/hide
Query:  QEFNDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKIMVKY
        +EFNDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKI VKY
Subjt:  QEFNDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKIMVKY

Query:  RHPIPRLDDMLDELHGANLFSKIDLKSGYHQIRMHVGDAYEFMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFVVVYFDDIL
        RHPIPRLDDMLDELHGANLFSKIDLKSGYHQIR         MHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFVVVYFDDIL
Subjt:  RHPIPRLDDMLDELHGANLFSKIDLKSGYHQIRMHVGDAYEFMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFVVVYFDDIL

Query:  VYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTEL
        VYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTEL
Subjt:  VYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTEL

Query:  VKKHVKFEWKEKQENAFNELKEKLIKAPCLAL
        VKKHVKFEWKEKQENAFNELKEKLIKAPCLAL
Subjt:  VKKHVKFEWKEKQENAFNELKEKLIKAPCLAL

TYK11702.1 F15O4.13 [Cucumis melo var. makuwa]1.4e-18596.69Show/hide
Query:  QEFNDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKIMVKY
        +EFNDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKI VKY
Subjt:  QEFNDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKIMVKY

Query:  RHPIPRLDDMLDELHGANLFSKIDLKSGYHQIRMHVGDAYEFMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFVVVYFDDIL
        RHPIPRLDDMLDELHGANLFSKIDLKSGYHQIR         MHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFVVVYFDDIL
Subjt:  RHPIPRLDDMLDELHGANLFSKIDLKSGYHQIRMHVGDAYEFMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFVVVYFDDIL

Query:  VYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTEL
        VYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTEL
Subjt:  VYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTEL

Query:  VKKHVKFEWKEKQENAFNELKEKLIKAPCLAL
        VKKHVKFEWKEKQENAFNELKEKLIKAPCLAL
Subjt:  VKKHVKFEWKEKQENAFNELKEKLIKAPCLAL

TYK22420.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]3.1e-18596.98Show/hide
Query:  EFNDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKIMVKYR
        EFNDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKI VKYR
Subjt:  EFNDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKIMVKYR

Query:  HPIPRLDDMLDELHGANLFSKIDLKSGYHQIRMHVGDAYEFMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFVVVYFDDILV
        HPIPRLDDMLDELHGANLFSKIDLKSGYHQIR         MHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFVVVYFDDILV
Subjt:  HPIPRLDDMLDELHGANLFSKIDLKSGYHQIRMHVGDAYEFMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFVVVYFDDILV

Query:  YSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELV
        YSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELV
Subjt:  YSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELV

Query:  KKHVKFEWKEKQENAFNELKEKLIKAPCLAL
        KKHVKFEWKEKQENAFNELKEKLIKAPCLAL
Subjt:  KKHVKFEWKEKQENAFNELKEKLIKAPCLAL

TYK26105.1 F15O4.13 [Cucumis melo var. makuwa]1.4e-18596.69Show/hide
Query:  QEFNDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKIMVKY
        +EFNDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKI VKY
Subjt:  QEFNDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKIMVKY

Query:  RHPIPRLDDMLDELHGANLFSKIDLKSGYHQIRMHVGDAYEFMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFVVVYFDDIL
        RHPIPRLDDMLDELHGANLFSKIDLKSGYHQIR         MHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFVVVYFDDIL
Subjt:  RHPIPRLDDMLDELHGANLFSKIDLKSGYHQIRMHVGDAYEFMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFVVVYFDDIL

Query:  VYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTEL
        VYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTEL
Subjt:  VYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTEL

Query:  VKKHVKFEWKEKQENAFNELKEKLIKAPCLAL
        VKKHVKFEWKEKQENAFNELKEKLIKAPCLAL
Subjt:  VKKHVKFEWKEKQENAFNELKEKLIKAPCLAL

TrEMBL top hitse value%identityAlignment
A0A5D3BWE8 F15O4.136.6e-18696.69Show/hide
Query:  QEFNDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKIMVKY
        +EFNDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKI VKY
Subjt:  QEFNDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKIMVKY

Query:  RHPIPRLDDMLDELHGANLFSKIDLKSGYHQIRMHVGDAYEFMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFVVVYFDDIL
        RHPIPRLDDMLDELHGANLFSKIDLKSGYHQIR         MHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFVVVYFDDIL
Subjt:  RHPIPRLDDMLDELHGANLFSKIDLKSGYHQIRMHVGDAYEFMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFVVVYFDDIL

Query:  VYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTEL
        VYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTEL
Subjt:  VYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTEL

Query:  VKKHVKFEWKEKQENAFNELKEKLIKAPCLAL
        VKKHVKFEWKEKQENAFNELKEKLIKAPCLAL
Subjt:  VKKHVKFEWKEKQENAFNELKEKLIKAPCLAL

A0A5D3C3D3 F15O4.136.6e-18696.69Show/hide
Query:  QEFNDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKIMVKY
        +EFNDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKI VKY
Subjt:  QEFNDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKIMVKY

Query:  RHPIPRLDDMLDELHGANLFSKIDLKSGYHQIRMHVGDAYEFMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFVVVYFDDIL
        RHPIPRLDDMLDELHGANLFSKIDLKSGYHQIR         MHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFVVVYFDDIL
Subjt:  RHPIPRLDDMLDELHGANLFSKIDLKSGYHQIRMHVGDAYEFMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFVVVYFDDIL

Query:  VYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTEL
        VYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTEL
Subjt:  VYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTEL

Query:  VKKHVKFEWKEKQENAFNELKEKLIKAPCLAL
        VKKHVKFEWKEKQENAFNELKEKLIKAPCLAL
Subjt:  VKKHVKFEWKEKQENAFNELKEKLIKAPCLAL

A0A5D3CK70 F15O4.136.6e-18696.69Show/hide
Query:  QEFNDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKIMVKY
        +EFNDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKI VKY
Subjt:  QEFNDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKIMVKY

Query:  RHPIPRLDDMLDELHGANLFSKIDLKSGYHQIRMHVGDAYEFMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFVVVYFDDIL
        RHPIPRLDDMLDELHGANLFSKIDLKSGYHQIR         MHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFVVVYFDDIL
Subjt:  RHPIPRLDDMLDELHGANLFSKIDLKSGYHQIRMHVGDAYEFMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFVVVYFDDIL

Query:  VYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTEL
        VYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTEL
Subjt:  VYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTEL

Query:  VKKHVKFEWKEKQENAFNELKEKLIKAPCLAL
        VKKHVKFEWKEKQENAFNELKEKLIKAPCLAL
Subjt:  VKKHVKFEWKEKQENAFNELKEKLIKAPCLAL

A0A5D3DGA7 Transposon Ty3-I Gag-Pol polyprotein1.5e-18596.98Show/hide
Query:  EFNDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKIMVKYR
        EFNDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKI VKYR
Subjt:  EFNDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKIMVKYR

Query:  HPIPRLDDMLDELHGANLFSKIDLKSGYHQIRMHVGDAYEFMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFVVVYFDDILV
        HPIPRLDDMLDELHGANLFSKIDLKSGYHQIR         MHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFVVVYFDDILV
Subjt:  HPIPRLDDMLDELHGANLFSKIDLKSGYHQIRMHVGDAYEFMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFVVVYFDDILV

Query:  YSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELV
        YSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELV
Subjt:  YSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELV

Query:  KKHVKFEWKEKQENAFNELKEKLIKAPCLAL
        KKHVKFEWKEKQENAFNELKEKLIKAPCLAL
Subjt:  KKHVKFEWKEKQENAFNELKEKLIKAPCLAL

A0A5D3DRJ1 F15O4.136.6e-18696.69Show/hide
Query:  QEFNDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKIMVKY
        +EFNDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKI VKY
Subjt:  QEFNDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKIMVKY

Query:  RHPIPRLDDMLDELHGANLFSKIDLKSGYHQIRMHVGDAYEFMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFVVVYFDDIL
        RHPIPRLDDMLDELHGANLFSKIDLKSGYHQIR         MHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFVVVYFDDIL
Subjt:  RHPIPRLDDMLDELHGANLFSKIDLKSGYHQIRMHVGDAYEFMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFVVVYFDDIL

Query:  VYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTEL
        VYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTEL
Subjt:  VYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTEL

Query:  VKKHVKFEWKEKQENAFNELKEKLIKAPCLAL
        VKKHVKFEWKEKQENAFNELKEKLIKAPCLAL
Subjt:  VKKHVKFEWKEKQENAFNELKEKLIKAPCLAL

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.61.3e-5836.58Show/hide
Query:  SLLQEFNDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPVILVPKKDGT-----WRMCVDCRA
        +LLQ+++D+  HE     L      +H I+      LP  + Y       +E++ Q+++++++G IR S SP + P+ +VPKK        +R+ +D R 
Subjt:  SLLQEFNDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPVILVPKKDGT-----WRMCVDCRA

Query:  INKIMVKYRHPIPRLDDMLDELHGANLFSKIDLKSGYHQIRMHVGDAYEFMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFV
        +N+I V  RHPIP +D++L +L   N F+ IDL  G+HQI M               KTAF TK G YE+L MPFGL NAP+TF R MN +L+  + K  
Subjt:  INKIMVKYRHPIPRLDDMLDELHGANLFSKIDLKSGYHQIRMHVGDAYEFMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFV

Query:  VVYFDDILVYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSS
        +VY DDI+V+S  L++H+  +  +  KL +  L     KC F  ++  FLG ++  DG+K + EK++AI+++P PT   E+++F GL  +YR+FI +F+ 
Subjt:  VVYFDDILVYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSS

Query:  IASPLTELVKKHVKFEWKEKQ-ENAFNELKEKLIKAPCL
        IA P+T+ +KK++K +    + ++AF +LK  + + P L
Subjt:  IASPLTELVKKHVKFEWKEKQ-ENAFNELKEKLIKAPCL

P0CT41 Transposon Tf2-12 polyprotein1.3e-5632.87Show/hide
Query:  TFVLMCKGNCLENEPDSNDGLPSAFKSLLQEFNDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCS
        T   M K + +  EP+    LP  +K    EF D+    +      P++G+E +++         +  Y   P + + +  ++ + +  G IRES +  +
Subjt:  TFVLMCKGNCLENEPDSNDGLPSAFKSLLQEFNDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCS

Query:  VPVILVPKKDGTWRMCVDCRAINKIMVKYRHPIPRLDDMLDELHGANLFSKIDLKSGYHQIRMHVGDAYEFMHVGDEWKTAFKTKFGLYEWLVMPFGLTN
         PV+ VPKK+GT RM VD + +NK +    +P+P ++ +L ++ G+ +F+K+DLKS YH IR         +  GDE K AF+   G++E+LVMP+G++ 
Subjt:  VPVILVPKKDGTWRMCVDCRAINKIMVKYRHPIPRLDDMLDELHGANLFSKIDLKSGYHQIRMHVGDAYEFMHVGDEWKTAFKTKFGLYEWLVMPFGLTN

Query:  APSTFMRLMNHVLKEYIGKFVVVYFDDILVYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNAS
        AP+ F   +N +L E     VV Y DDIL++SK  ++H+ HVK +L KL+   L  N  KC F   Q+ F+G+ + + G    +E +  + +W  P N  
Subjt:  APSTFMRLMNHVLKEYIGKFVVVYFDDILVYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNAS

Query:  EVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVKFEWKEKQENAFNELKEKLIKAPCL
        E+R F G  ++ R+FI   S +  PL  L+KK V+++W   Q  A   +K+ L+  P L
Subjt:  EVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVKFEWKEKQENAFNELKEKLIKAPCL

P20825 Retrovirus-related Pol polyprotein from transposon 2972.5e-5739.46Show/hide
Query:  YRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPVILVPKKD-----GTWRMCVDCRAINKIMVKYRHPIPRLDDMLDELHGANLFSKIDLKSGYHQIRM
        Y    T   E++ QV+E++++G IRES SP + P  +VPKK        +R+ +D R +N+I +  R+PIP +D++L +L     F+ IDL  G+HQI M
Subjt:  YRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPVILVPKKD-----GTWRMCVDCRAINKIMVKYRHPIPRLDDMLDELHGANLFSKIDLKSGYHQIRM

Query:  HVGDAYEFMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFVVVYFDDILVYSKGLNDHILHVKTILLKLREEKLYANFKKCSF
                       KTAF TK G YE+L MPFGL NAP+TF R MN++L+  + K  +VY DDI+++S  L +H+  ++ +  KL +  L     KC F
Subjt:  HVGDAYEFMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFVVVYFDDILVYSKGLNDHILHVKTILLKLREEKLYANFKKCSF

Query:  CLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVKFEWKEKQE-NAFNELKEKLIKAPCLAL
          ++ +FLG IV  DG+K +  KVKAI  +P PT   E+R+F GL  +YR+FI +++ IA P+T  +KK  K + ++ +   AF +LK  +I+ P L L
Subjt:  CLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVKFEWKEKQE-NAFNELKEKLIKAPCLAL

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein6.0e-6740.98Show/hide
Query:  NDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKIMVKYRHP
        ND+ P       +P    ++H I+  PGA LP +  Y       +EI + V++L+D  +I  S SPCS PV+LVPKKDGT+R+CVD R +NK  +    P
Subjt:  NDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKIMVKYRHP

Query:  IPRLDDMLDELHGANLFSKIDLKSGYHQIRMHVGDAYEFMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFVVVYFDDILVYS
        +PR+D++L  +  A +F+ +DL SGYHQI M   D Y         KTAF T  G YE+ VMPFGL NAPSTF R M    ++   +FV VY DDIL++S
Subjt:  IPRLDDMLDELHGANLFSKIDLKSGYHQIRMHVGDAYEFMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFVVVYFDDILVYS

Query:  KGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKK
        +   +H  H+ T+L +L+ E L    KKC F  E+  FLG+ +G   +   + K  AIR++PTP    + + F G+ ++YRRFI + S IA P+   +  
Subjt:  KGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKK

Query:  HVKFEWKEKQENAFNELKEKLIKAPCL
          K +W EKQ+ A  +LK  L  +P L
Subjt:  HVKFEWKEKQENAFNELKEKLIKAPCL

Q99315 Transposon Ty3-G Gag-Pol polyprotein2.1e-6740.98Show/hide
Query:  NDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKIMVKYRHP
        ND+ P       +P    ++H I+  PGA LP +  Y       +EI + V++L+D  +I  S SPCS PV+LVPKKDGT+R+CVD R +NK  +    P
Subjt:  NDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPVILVPKKDGTWRMCVDCRAINKIMVKYRHP

Query:  IPRLDDMLDELHGANLFSKIDLKSGYHQIRMHVGDAYEFMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFVVVYFDDILVYS
        +PR+D++L  +  A +F+ +DL SGYHQI M   D Y         KTAF T  G YE+ VMPFGL NAPSTF R M    ++   +FV VY DDIL++S
Subjt:  IPRLDDMLDELHGANLFSKIDLKSGYHQIRMHVGDAYEFMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLKEYIGKFVVVYFDDILVYS

Query:  KGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKK
        +   +H  H+ T+L +L+ E L    KKC F  E+  FLG+ +G   +   + K  AIR++PTP    + + F G+ ++YRRFI + S IA P+   +  
Subjt:  KGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKK

Query:  HVKFEWKEKQENAFNELKEKLIKAPCL
          K +W EKQ+ A ++LK+ L  +P L
Subjt:  HVKFEWKEKQENAFNELKEKLIKAPCL

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein9.6e-2041.46Show/hide
Query:  HVKTILLKLREEKLYANFKKCSFCLEQIHFLG--FIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVKFEW
        H+  +L    + + YAN KKC+F   QI +LG   I+  +GV  D  K++A+  WP P N +E+R F GL  +YRRF+K++  I  PLTEL+KK+   +W
Subjt:  HVKTILLKLREEKLYANFKKCSFCLEQIHFLG--FIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLTELVKKHVKFEW

Query:  KEKQENAFNELKEKLIKAPCLAL
         E    AF  LK  +   P LAL
Subjt:  KEKQENAFNELKEKLIKAPCLAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTCATTCGAAGCACCAACCTTTGTACTTATGTGCAAAGGAAATTGTTTAGAAAATGAGCCTGACTCTAATGATGGTTTGCCTAGTGCTTTTAAATCTCTTTTGCA
GGAATTTAATGACATGTTTCCACATGAAGATGCACCTACGGGTTTACCTCCTCTAAGAGGGATTGAGCATCAAATTGACTTCATTCCGGGTGCAACTCTTCCAAACATGG
CTGCCTATAGAACCAATCCAACCGAGACTAAGGAGATCCAAAGACAAGTTGAAGAACTCATGGATAAAGGGTATATTAGAGAAAGTATGAGTCCTTGCTCAGTTCCGGTG
ATTTTGGTACCCAAGAAAGATGGTACATGGAGGATGTGTGTTGATTGTCGAGCTATCAATAAAATAATGGTAAAGTATCGACATCCTATTCCTCGATTAGATGACATGTT
AGATGAATTGCATGGTGCTAATCTGTTTTCAAAAATAGACCTTAAAAGCGGTTATCATCAAATTCGTATGCATGTAGGAGATGCATACGAATTTATGCATGTAGGAGATG
AATGGAAAACGGCTTTCAAAACAAAGTTTGGGCTTTATGAATGGCTTGTTATGCCGTTTGGCCTTACTAATGCACCAAGTACTTTTATGAGGTTAATGAATCATGTTTTG
AAGGAATACATAGGAAAATTTGTGGTTGTATACTTTGATGATATCCTTGTTTACTCAAAAGGCTTGAATGATCATATTTTGCATGTTAAGACAATTTTACTCAAACTTAG
AGAAGAGAAGCTTTATGCCAACTTCAAAAAGTGTAGTTTTTGTCTAGAACAAATACATTTCCTAGGGTTCATTGTTGGAAAGGATGGAGTAAAAGTTGATGAAGAAAAGG
TAAAGGCTATCCGAGAATGGCCAACTCCTACCAATGCATCCGAGGTAAGATCCTTCCATGGTTTGGCTAGTTTCTATAGGAGATTTATTAAAGATTTTAGTAGCATAGCC
TCACCATTAACTGAACTTGTGAAAAAGCATGTGAAATTTGAATGGAAAGAAAAGCAGGAAAATGCATTCAATGAGCTTAAAGAAAAATTGATCAAAGCACCTTGTCTTGC
TTTACTAACTTTGATAAATCTTTTGAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTTCATTCGAAGCACCAACCTTTGTACTTATGTGCAAAGGAAATTGTTTAGAAAATGAGCCTGACTCTAATGATGGTTTGCCTAGTGCTTTTAAATCTCTTTTGCA
GGAATTTAATGACATGTTTCCACATGAAGATGCACCTACGGGTTTACCTCCTCTAAGAGGGATTGAGCATCAAATTGACTTCATTCCGGGTGCAACTCTTCCAAACATGG
CTGCCTATAGAACCAATCCAACCGAGACTAAGGAGATCCAAAGACAAGTTGAAGAACTCATGGATAAAGGGTATATTAGAGAAAGTATGAGTCCTTGCTCAGTTCCGGTG
ATTTTGGTACCCAAGAAAGATGGTACATGGAGGATGTGTGTTGATTGTCGAGCTATCAATAAAATAATGGTAAAGTATCGACATCCTATTCCTCGATTAGATGACATGTT
AGATGAATTGCATGGTGCTAATCTGTTTTCAAAAATAGACCTTAAAAGCGGTTATCATCAAATTCGTATGCATGTAGGAGATGCATACGAATTTATGCATGTAGGAGATG
AATGGAAAACGGCTTTCAAAACAAAGTTTGGGCTTTATGAATGGCTTGTTATGCCGTTTGGCCTTACTAATGCACCAAGTACTTTTATGAGGTTAATGAATCATGTTTTG
AAGGAATACATAGGAAAATTTGTGGTTGTATACTTTGATGATATCCTTGTTTACTCAAAAGGCTTGAATGATCATATTTTGCATGTTAAGACAATTTTACTCAAACTTAG
AGAAGAGAAGCTTTATGCCAACTTCAAAAAGTGTAGTTTTTGTCTAGAACAAATACATTTCCTAGGGTTCATTGTTGGAAAGGATGGAGTAAAAGTTGATGAAGAAAAGG
TAAAGGCTATCCGAGAATGGCCAACTCCTACCAATGCATCCGAGGTAAGATCCTTCCATGGTTTGGCTAGTTTCTATAGGAGATTTATTAAAGATTTTAGTAGCATAGCC
TCACCATTAACTGAACTTGTGAAAAAGCATGTGAAATTTGAATGGAAAGAAAAGCAGGAAAATGCATTCAATGAGCTTAAAGAAAAATTGATCAAAGCACCTTGTCTTGC
TTTACTAACTTTGATAAATCTTTTGAGATAG
Protein sequenceShow/hide protein sequence
MFSFEAPTFVLMCKGNCLENEPDSNDGLPSAFKSLLQEFNDMFPHEDAPTGLPPLRGIEHQIDFIPGATLPNMAAYRTNPTETKEIQRQVEELMDKGYIRESMSPCSVPV
ILVPKKDGTWRMCVDCRAINKIMVKYRHPIPRLDDMLDELHGANLFSKIDLKSGYHQIRMHVGDAYEFMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVL
KEYIGKFVVVYFDDILVYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQIHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIA
SPLTELVKKHVKFEWKEKQENAFNELKEKLIKAPCLALLTLINLLR