CuGenDBv2

Gene ID	Cmc07g0196021
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag/pol protein
Genome location	CMiso1.1chr07:19392106..19393395
RNA-Seq Expression	Cmc07g0196021
Synteny	Cmc07g0196021
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa]

8.0e-206

84.79

Show/hide

Query:  MLKSIRILLSIATFYDYEIWQKDVKTAFLNGNLEKCIFMSQLEGFITQGQEQKVCKLNRSIHELKQASKFWNIIFDTAIKSYNFDQNVDEPCAYKKINKG
        MLKSIRILLSIATFYDYEIWQ DVKTAFLNGNLE+ IFMSQ EGFITQGQEQKVCKLNRSI+ LKQAS+ WNI FDTAIKSY FDQNVDEPC YKKINKG
Subjt:  MLKSIRILLSIATFYDYEIWQKDVKTAFLNGNLEKCIFMSQLEGFITQGQEQKVCKLNRSIHELKQASKFWNIIFDTAIKSYNFDQNVDEPCAYKKINKG

Query:  KVAFLVLYVDDILLIRNDVGYLTDVKTLLAAQFQMKYLGEAQYV-RIQIIRDHKNKSLTLSQATCINKMLIRYSMQSSKNGLLPFRHGVHLSKEQCPKTS
        KVAFLVLYVDDILLI NDVGYLTDVK  LAAQFQMK LGEAQYV  IQIIRD KNK+L LSQAT I+K+L+RYSMQ+SK GLLPFRHGVHLSKEQ PKT 
Subjt:  KVAFLVLYVDDILLIRNDVGYLTDVKTLLAAQFQMKYLGEAQYV-RIQIIRDHKNKSLTLSQATCINKMLIRYSMQSSKNGLLPFRHGVHLSKEQCPKTS

Query:  KEVEDIRRIPYASTVGNLMYAMLCTRPDICYAVGIVSKYQSNLGLDHWTTVKIIIKYLRRIRDYMLVYGGKDLILTRYTDPDFQTDKDSKKSTSGSMFIL
        +EVED+RRIPYAS VG+LMYAMLCTRPDICYAVGIVS+YQSN GLDHWT VKI++KYLRR RDYMLVYG KDLILT YTD DFQTDKDS+KSTSGS+F L
Subjt:  KEVEDIRRIPYASTVGNLMYAMLCTRPDICYAVGIVSKYQSNLGLDHWTTVKIIIKYLRRIRDYMLVYGGKDLILTRYTDPDFQTDKDSKKSTSGSMFIL

Query:  NGGVVVWCSIKQGCIVDSTMEAGYV----VAKEAIWLRKFLLDFEVVPNMNLPITLYSDNSGTVANSKEPHSHKRGKDIERKYHLIQEIVQRGDVIVTKI
        NGG VVW SIKQGCI DSTMEA YV     AKEA+WLRKFL D EVVPNMNLPITLY DNSG VANSKEP SHKRGK IERKYHLI+EIVQRGDVIVTKI
Subjt:  NGGVVVWCSIKQGCIVDSTMEAGYV----VAKEAIWLRKFLLDFEVVPNMNLPITLYSDNSGTVANSKEPHSHKRGKDIERKYHLIQEIVQRGDVIVTKI

Query:  TSEHNITDPFTKTLTTKVFEGHLESLGPRDMYIK
         SEHNI DPFTKTLT KVFEGHLESLG RDMYI+
Subjt:  TSEHNITDPFTKTLTTKVFEGHLESLGPRDMYIK

KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa]

6.3e-203

83.87

Show/hide

Query:  MLKSIRILLSIATFYDYEIWQKDVKTAFLNGNLEKCIFMSQLEGFITQGQEQKVCKLNRSIHELKQASKFWNIIFDTAIKSYNFDQNVDEPCAYKKINKG
        MLKSIRILLSIA FYDYEIWQ DVKTAFLNGNLE+ IFMSQ EGFITQGQEQKVCKLNRSI+ LKQAS+ WNI FDTAIKSY FDQNVDEPC YKKINKG
Subjt:  MLKSIRILLSIATFYDYEIWQKDVKTAFLNGNLEKCIFMSQLEGFITQGQEQKVCKLNRSIHELKQASKFWNIIFDTAIKSYNFDQNVDEPCAYKKINKG

Query:  KVAFLVLYVDDILLIRNDVGYLTDVKTLLAAQFQMKYLGEAQYV-RIQIIRDHKNKSLTLSQATCINKMLIRYSMQSSKNGLLPFRHGVHLSKEQCPKTS
        KVAFLVLYVDDILLI NDVGYLTDVK  LAAQFQMK LGE QYV  IQIIRD KNK+L LSQAT I+K+L+RYSMQ+SK GLLPFRHGVHLSKEQ PKT 
Subjt:  KVAFLVLYVDDILLIRNDVGYLTDVKTLLAAQFQMKYLGEAQYV-RIQIIRDHKNKSLTLSQATCINKMLIRYSMQSSKNGLLPFRHGVHLSKEQCPKTS

Query:  KEVEDIRRIPYASTVGNLMYAMLCTRPDICYAVGIVSKYQSNLGLDHWTTVKIIIKYLRRIRDYMLVYGGKDLILTRYTDPDFQTDKDSKKSTSGSMFIL
        +EVED+RRIPYAS VG+LMYAMLCTRPDICYAVGIVS+YQSN GLDHWT VKII+KYLRR RDYMLVYG KDLILT YT+ DFQTDKDS+KSTS S+F L
Subjt:  KEVEDIRRIPYASTVGNLMYAMLCTRPDICYAVGIVSKYQSNLGLDHWTTVKIIIKYLRRIRDYMLVYGGKDLILTRYTDPDFQTDKDSKKSTSGSMFIL

Query:  NGGVVVWCSIKQGCIVDSTMEAGYV----VAKEAIWLRKFLLDFEVVPNMNLPITLYSDNSGTVANSKEPHSHKRGKDIERKYHLIQEIVQRGDVIVTKI
        NGG VVW SIKQGCI DSTMEA YV     AKEA+WL+KFL D EVVPNMNLPITLY DNSG VANSKEP SHKRGK IERKYHLI+EIVQRGDVIVTKI
Subjt:  NGGVVVWCSIKQGCIVDSTMEAGYV----VAKEAIWLRKFLLDFEVVPNMNLPITLYSDNSGTVANSKEPHSHKRGKDIERKYHLIQEIVQRGDVIVTKI

Query:  TSEHNITDPFTKTLTTKVFEGHLESLGPRDMYIK
         SEHNI DPFTKTLT KVFEGHLESLG RDMYI+
Subjt:  TSEHNITDPFTKTLTTKVFEGHLESLGPRDMYIK

KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa]

8.0e-206

84.79

Show/hide

Query:  MLKSIRILLSIATFYDYEIWQKDVKTAFLNGNLEKCIFMSQLEGFITQGQEQKVCKLNRSIHELKQASKFWNIIFDTAIKSYNFDQNVDEPCAYKKINKG
        MLKSIRILLSIATFYDYEIWQ DVKTAFLNGNLE+ IFMSQ EGFITQGQEQKVCKLNRSI+ LKQAS+ WNI FDTAIKSY FDQNVDEPC YKKINKG
Subjt:  MLKSIRILLSIATFYDYEIWQKDVKTAFLNGNLEKCIFMSQLEGFITQGQEQKVCKLNRSIHELKQASKFWNIIFDTAIKSYNFDQNVDEPCAYKKINKG

Query:  KVAFLVLYVDDILLIRNDVGYLTDVKTLLAAQFQMKYLGEAQYV-RIQIIRDHKNKSLTLSQATCINKMLIRYSMQSSKNGLLPFRHGVHLSKEQCPKTS
        KVAFLVLYVDDILLI NDVGYLTDVK  LAAQFQMK LGEAQYV  IQIIRD KNK+L LSQAT I+K+L+RYSMQ+SK GLLPFRHGVHLSKEQ PKT 
Subjt:  KVAFLVLYVDDILLIRNDVGYLTDVKTLLAAQFQMKYLGEAQYV-RIQIIRDHKNKSLTLSQATCINKMLIRYSMQSSKNGLLPFRHGVHLSKEQCPKTS

Query:  KEVEDIRRIPYASTVGNLMYAMLCTRPDICYAVGIVSKYQSNLGLDHWTTVKIIIKYLRRIRDYMLVYGGKDLILTRYTDPDFQTDKDSKKSTSGSMFIL
        +EVED+RRIPYAS VG+LMYAMLCTRPDICYAVGIVS+YQSN GLDHWT VKI++KYLRR RDYMLVYG KDLILT YTD DFQTDKDS+KSTSGS+F L
Subjt:  KEVEDIRRIPYASTVGNLMYAMLCTRPDICYAVGIVSKYQSNLGLDHWTTVKIIIKYLRRIRDYMLVYGGKDLILTRYTDPDFQTDKDSKKSTSGSMFIL

Query:  NGGVVVWCSIKQGCIVDSTMEAGYV----VAKEAIWLRKFLLDFEVVPNMNLPITLYSDNSGTVANSKEPHSHKRGKDIERKYHLIQEIVQRGDVIVTKI
        NGG VVW SIKQGCI DSTMEA YV     AKEA+WLRKFL D EVVPNMNLPITLY DNSG VANSKEP SHKRGK IERKYHLI+EIVQRGDVIVTKI
Subjt:  NGGVVVWCSIKQGCIVDSTMEAGYV----VAKEAIWLRKFLLDFEVVPNMNLPITLYSDNSGTVANSKEPHSHKRGKDIERKYHLIQEIVQRGDVIVTKI

Query:  TSEHNITDPFTKTLTTKVFEGHLESLGPRDMYIK
         SEHNI DPFTKTLT KVFEGHLESLG RDMYI+
Subjt:  TSEHNITDPFTKTLTTKVFEGHLESLGPRDMYIK

KAA0063051.1 gag/pol protein [Cucumis melo var. makuwa]

2.2e-240

98.35

Show/hide

Query:  ILLSIATFYDYEIWQKDVKTAFLNGNLEKCIFMSQLEGFITQGQEQKVCKLNRSIHELKQASKFWNIIFDTAIKSYNFDQNVDEPCAYKKINKGKVAFLV
        ILLSIATFYDYEIWQKDVKTAFLN NLEKCIFMSQLEGFITQGQEQKVCKLNRSI+ELKQASKFWNIIFDTAIKSYNFDQNVDEPCAYKKINKGKVAFLV
Subjt:  ILLSIATFYDYEIWQKDVKTAFLNGNLEKCIFMSQLEGFITQGQEQKVCKLNRSIHELKQASKFWNIIFDTAIKSYNFDQNVDEPCAYKKINKGKVAFLV

Query:  LYVDDILLIRNDVGYLTDVKTLLAAQFQMKYLGEAQYVRIQIIRDHKNKSLTLSQATCINKMLIRYSMQSSKNGLLPFRHGVHLSKEQCPKTSKEVEDIR
        LYVDDILLIRNDVGYLTDVKTLLAAQFQMKYLGEAQYV IQIIRDHKNK+LTLSQATCINKMLIRYSMQSSKNGLLPFRHGVHLSKEQCPKT KEVEDIR
Subjt:  LYVDDILLIRNDVGYLTDVKTLLAAQFQMKYLGEAQYVRIQIIRDHKNKSLTLSQATCINKMLIRYSMQSSKNGLLPFRHGVHLSKEQCPKTSKEVEDIR

Query:  RIPYASTVGNLMYAMLCTRPDICYAVGIVSKYQSNLGLDHWTTVKIIIKYLRRIRDYMLVYGGKDLILTRYTDPDFQTDKDSKKSTSGSMFILNGGVVVW
        RIPYASTVGNLMYAMLCTRPDICYAVGIVSKYQSNLGLDHWTTVKIIIKYLRRIRDYMLVYGGKDLILTRYTDPDFQTDKDSKKSTSGSMFILNGGVVVW
Subjt:  RIPYASTVGNLMYAMLCTRPDICYAVGIVSKYQSNLGLDHWTTVKIIIKYLRRIRDYMLVYGGKDLILTRYTDPDFQTDKDSKKSTSGSMFILNGGVVVW

Query:  CSIKQGCIVDSTMEAGYVVAKEAIWLRKFLLDFEVVPNMNLPITLYSDNSGTVANSKEPHSHKRGKDIERKYHLIQEIVQRGDVIVTKITSEHNITDPFT
        CSIKQGCIVDSTMEAGYVVAKEAIWLRKFLLDFEVVPNMNLPITLYSDNSGTVANSKEPHSHKRGKDI+RKYHLIQEIVQRGDVIVTKITSEHNITDPFT
Subjt:  CSIKQGCIVDSTMEAGYVVAKEAIWLRKFLLDFEVVPNMNLPITLYSDNSGTVANSKEPHSHKRGKDIERKYHLIQEIVQRGDVIVTKITSEHNITDPFT

Query:  KTLTTKVFEGHLESLGPRDMYIK
        KTLTTKVFEGHLESLG RDMYIK
Subjt:  KTLTTKVFEGHLESLGPRDMYIK

TYJ96907.1 gag/pol protein [Cucumis melo var. makuwa]

1.4e-197

82.49

Show/hide

Query:  MLKSIRILLSIATFYDYEIWQKDVKTAFLNGNLEKCIFMSQLEGFITQGQEQKVCKLNRSIHELKQASKFWNIIFDTAIKSYNFDQNVDEPCAYKKINKG
        MLKSIRILLSIATFYDYEIWQ DVKTAF NGNLE+ IFMSQLEGFITQGQ+QKVCKLNRSI+ LKQ S+ WNI FDTAIKSY FDQNVDEPC YKKINKG
Subjt:  MLKSIRILLSIATFYDYEIWQKDVKTAFLNGNLEKCIFMSQLEGFITQGQEQKVCKLNRSIHELKQASKFWNIIFDTAIKSYNFDQNVDEPCAYKKINKG

Query:  KVAFLVLYVDDILLIRNDVGYLTDVKTLLAAQFQMKYLGEAQYV-RIQIIRDHKNKSLTLSQATCINKMLIRYSMQSSKNGLLPFRHGVHLSKEQCPKTS
        KVAFLVLYVDDILLI NDVGYL D+K  LA QFQMK L EAQYV  IQIIRDHKNK+L LSQAT INKML+RYSMQ+SK GLLPFRHGVHLSKEQCPKT 
Subjt:  KVAFLVLYVDDILLIRNDVGYLTDVKTLLAAQFQMKYLGEAQYV-RIQIIRDHKNKSLTLSQATCINKMLIRYSMQSSKNGLLPFRHGVHLSKEQCPKTS

Query:  KEVEDIRRIPYASTVGNLMYAMLCTRPDICYAVGIVSKYQSNLGLDHWTTVKIIIKYLRRIRDYMLVYGGKDLILTRYTDPDFQTDKDSKKSTSGSMFIL
        +EVED+R IPYAS V +L+Y MLCTRPDICY VGIV++YQSN GLDHWT VKII+KYLRR RDYMLVYG KDLILT YTD DFQTDKDS+KSTS S+F L
Subjt:  KEVEDIRRIPYASTVGNLMYAMLCTRPDICYAVGIVSKYQSNLGLDHWTTVKIIIKYLRRIRDYMLVYGGKDLILTRYTDPDFQTDKDSKKSTSGSMFIL

Query:  NGGVVVWCSIKQGCIVDSTMEAGYV----VAKEAIWLRKFLLDFEVVPNMNLPITLYSDNSGTVANSKEPHSHKRGKDIERKYHLIQEIVQRGDVIVTKI
        NGG VVW SIKQGCIVDST+E  YV     AK+A WLRKFL D EVVPNMNLPITLY DNSGTVANSKEP SHKRGK IERKYHLI+EIVQR DVIVTKI
Subjt:  NGGVVVWCSIKQGCIVDSTMEAGYV----VAKEAIWLRKFLLDFEVVPNMNLPITLYSDNSGTVANSKEPHSHKRGKDIERKYHLIQEIVQRGDVIVTKI

Query:  TSEHNITDPFTKTLTTKVFEGHLESLGPRDMYIK
         SEHNI DPFTKTLT KVFEGHLESLG RDMYI+
Subjt:  TSEHNITDPFTKTLTTKVFEGHLESLGPRDMYIK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T2V9 Gag/pol protein

3.1e-203

83.87

Show/hide

Query:  MLKSIRILLSIATFYDYEIWQKDVKTAFLNGNLEKCIFMSQLEGFITQGQEQKVCKLNRSIHELKQASKFWNIIFDTAIKSYNFDQNVDEPCAYKKINKG
        MLKSIRILLSIA FYDYEIWQ DVKTAFLNGNLE+ IFMSQ EGFITQGQEQKVCKLNRSI+ LKQAS+ WNI FDTAIKSY FDQNVDEPC YKKINKG
Subjt:  MLKSIRILLSIATFYDYEIWQKDVKTAFLNGNLEKCIFMSQLEGFITQGQEQKVCKLNRSIHELKQASKFWNIIFDTAIKSYNFDQNVDEPCAYKKINKG

Query:  KVAFLVLYVDDILLIRNDVGYLTDVKTLLAAQFQMKYLGEAQYV-RIQIIRDHKNKSLTLSQATCINKMLIRYSMQSSKNGLLPFRHGVHLSKEQCPKTS
        KVAFLVLYVDDILLI NDVGYLTDVK  LAAQFQMK LGE QYV  IQIIRD KNK+L LSQAT I+K+L+RYSMQ+SK GLLPFRHGVHLSKEQ PKT 
Subjt:  KVAFLVLYVDDILLIRNDVGYLTDVKTLLAAQFQMKYLGEAQYV-RIQIIRDHKNKSLTLSQATCINKMLIRYSMQSSKNGLLPFRHGVHLSKEQCPKTS

Query:  KEVEDIRRIPYASTVGNLMYAMLCTRPDICYAVGIVSKYQSNLGLDHWTTVKIIIKYLRRIRDYMLVYGGKDLILTRYTDPDFQTDKDSKKSTSGSMFIL
        +EVED+RRIPYAS VG+LMYAMLCTRPDICYAVGIVS+YQSN GLDHWT VKII+KYLRR RDYMLVYG KDLILT YT+ DFQTDKDS+KSTS S+F L
Subjt:  KEVEDIRRIPYASTVGNLMYAMLCTRPDICYAVGIVSKYQSNLGLDHWTTVKIIIKYLRRIRDYMLVYGGKDLILTRYTDPDFQTDKDSKKSTSGSMFIL

Query:  NGGVVVWCSIKQGCIVDSTMEAGYV----VAKEAIWLRKFLLDFEVVPNMNLPITLYSDNSGTVANSKEPHSHKRGKDIERKYHLIQEIVQRGDVIVTKI
        NGG VVW SIKQGCI DSTMEA YV     AKEA+WL+KFL D EVVPNMNLPITLY DNSG VANSKEP SHKRGK IERKYHLI+EIVQRGDVIVTKI
Subjt:  NGGVVVWCSIKQGCIVDSTMEAGYV----VAKEAIWLRKFLLDFEVVPNMNLPITLYSDNSGTVANSKEPHSHKRGKDIERKYHLIQEIVQRGDVIVTKI

Query:  TSEHNITDPFTKTLTTKVFEGHLESLGPRDMYIK
         SEHNI DPFTKTLT KVFEGHLESLG RDMYI+
Subjt:  TSEHNITDPFTKTLTTKVFEGHLESLGPRDMYIK

A0A5A7TZD0 Gag/pol protein

3.9e-206

84.79

Show/hide

Query:  MLKSIRILLSIATFYDYEIWQKDVKTAFLNGNLEKCIFMSQLEGFITQGQEQKVCKLNRSIHELKQASKFWNIIFDTAIKSYNFDQNVDEPCAYKKINKG
        MLKSIRILLSIATFYDYEIWQ DVKTAFLNGNLE+ IFMSQ EGFITQGQEQKVCKLNRSI+ LKQAS+ WNI FDTAIKSY FDQNVDEPC YKKINKG
Subjt:  MLKSIRILLSIATFYDYEIWQKDVKTAFLNGNLEKCIFMSQLEGFITQGQEQKVCKLNRSIHELKQASKFWNIIFDTAIKSYNFDQNVDEPCAYKKINKG

Query:  KVAFLVLYVDDILLIRNDVGYLTDVKTLLAAQFQMKYLGEAQYV-RIQIIRDHKNKSLTLSQATCINKMLIRYSMQSSKNGLLPFRHGVHLSKEQCPKTS
        KVAFLVLYVDDILLI NDVGYLTDVK  LAAQFQMK LGEAQYV  IQIIRD KNK+L LSQAT I+K+L+RYSMQ+SK GLLPFRHGVHLSKEQ PKT 
Subjt:  KVAFLVLYVDDILLIRNDVGYLTDVKTLLAAQFQMKYLGEAQYV-RIQIIRDHKNKSLTLSQATCINKMLIRYSMQSSKNGLLPFRHGVHLSKEQCPKTS

Query:  KEVEDIRRIPYASTVGNLMYAMLCTRPDICYAVGIVSKYQSNLGLDHWTTVKIIIKYLRRIRDYMLVYGGKDLILTRYTDPDFQTDKDSKKSTSGSMFIL
        +EVED+RRIPYAS VG+LMYAMLCTRPDICYAVGIVS+YQSN GLDHWT VKI++KYLRR RDYMLVYG KDLILT YTD DFQTDKDS+KSTSGS+F L
Subjt:  KEVEDIRRIPYASTVGNLMYAMLCTRPDICYAVGIVSKYQSNLGLDHWTTVKIIIKYLRRIRDYMLVYGGKDLILTRYTDPDFQTDKDSKKSTSGSMFIL

Query:  NGGVVVWCSIKQGCIVDSTMEAGYV----VAKEAIWLRKFLLDFEVVPNMNLPITLYSDNSGTVANSKEPHSHKRGKDIERKYHLIQEIVQRGDVIVTKI
        NGG VVW SIKQGCI DSTMEA YV     AKEA+WLRKFL D EVVPNMNLPITLY DNSG VANSKEP SHKRGK IERKYHLI+EIVQRGDVIVTKI
Subjt:  NGGVVVWCSIKQGCIVDSTMEAGYV----VAKEAIWLRKFLLDFEVVPNMNLPITLYSDNSGTVANSKEPHSHKRGKDIERKYHLIQEIVQRGDVIVTKI

Query:  TSEHNITDPFTKTLTTKVFEGHLESLGPRDMYIK
         SEHNI DPFTKTLT KVFEGHLESLG RDMYI+
Subjt:  TSEHNITDPFTKTLTTKVFEGHLESLGPRDMYIK

A0A5A7UYE8 Gag/pol protein

3.9e-206

84.79

Show/hide

Query:  MLKSIRILLSIATFYDYEIWQKDVKTAFLNGNLEKCIFMSQLEGFITQGQEQKVCKLNRSIHELKQASKFWNIIFDTAIKSYNFDQNVDEPCAYKKINKG
        MLKSIRILLSIATFYDYEIWQ DVKTAFLNGNLE+ IFMSQ EGFITQGQEQKVCKLNRSI+ LKQAS+ WNI FDTAIKSY FDQNVDEPC YKKINKG
Subjt:  MLKSIRILLSIATFYDYEIWQKDVKTAFLNGNLEKCIFMSQLEGFITQGQEQKVCKLNRSIHELKQASKFWNIIFDTAIKSYNFDQNVDEPCAYKKINKG

Query:  KVAFLVLYVDDILLIRNDVGYLTDVKTLLAAQFQMKYLGEAQYV-RIQIIRDHKNKSLTLSQATCINKMLIRYSMQSSKNGLLPFRHGVHLSKEQCPKTS
        KVAFLVLYVDDILLI NDVGYLTDVK  LAAQFQMK LGEAQYV  IQIIRD KNK+L LSQAT I+K+L+RYSMQ+SK GLLPFRHGVHLSKEQ PKT 
Subjt:  KVAFLVLYVDDILLIRNDVGYLTDVKTLLAAQFQMKYLGEAQYV-RIQIIRDHKNKSLTLSQATCINKMLIRYSMQSSKNGLLPFRHGVHLSKEQCPKTS

Query:  KEVEDIRRIPYASTVGNLMYAMLCTRPDICYAVGIVSKYQSNLGLDHWTTVKIIIKYLRRIRDYMLVYGGKDLILTRYTDPDFQTDKDSKKSTSGSMFIL
        +EVED+RRIPYAS VG+LMYAMLCTRPDICYAVGIVS+YQSN GLDHWT VKI++KYLRR RDYMLVYG KDLILT YTD DFQTDKDS+KSTSGS+F L
Subjt:  KEVEDIRRIPYASTVGNLMYAMLCTRPDICYAVGIVSKYQSNLGLDHWTTVKIIIKYLRRIRDYMLVYGGKDLILTRYTDPDFQTDKDSKKSTSGSMFIL

Query:  NGGVVVWCSIKQGCIVDSTMEAGYV----VAKEAIWLRKFLLDFEVVPNMNLPITLYSDNSGTVANSKEPHSHKRGKDIERKYHLIQEIVQRGDVIVTKI
        NGG VVW SIKQGCI DSTMEA YV     AKEA+WLRKFL D EVVPNMNLPITLY DNSG VANSKEP SHKRGK IERKYHLI+EIVQRGDVIVTKI
Subjt:  NGGVVVWCSIKQGCIVDSTMEAGYV----VAKEAIWLRKFLLDFEVVPNMNLPITLYSDNSGTVANSKEPHSHKRGKDIERKYHLIQEIVQRGDVIVTKI

Query:  TSEHNITDPFTKTLTTKVFEGHLESLGPRDMYIK
         SEHNI DPFTKTLT KVFEGHLESLG RDMYI+
Subjt:  TSEHNITDPFTKTLTTKVFEGHLESLGPRDMYIK

A0A5A7VBI0 Gag/pol protein

1.1e-240

98.35

Show/hide

Query:  ILLSIATFYDYEIWQKDVKTAFLNGNLEKCIFMSQLEGFITQGQEQKVCKLNRSIHELKQASKFWNIIFDTAIKSYNFDQNVDEPCAYKKINKGKVAFLV
        ILLSIATFYDYEIWQKDVKTAFLN NLEKCIFMSQLEGFITQGQEQKVCKLNRSI+ELKQASKFWNIIFDTAIKSYNFDQNVDEPCAYKKINKGKVAFLV
Subjt:  ILLSIATFYDYEIWQKDVKTAFLNGNLEKCIFMSQLEGFITQGQEQKVCKLNRSIHELKQASKFWNIIFDTAIKSYNFDQNVDEPCAYKKINKGKVAFLV

Query:  LYVDDILLIRNDVGYLTDVKTLLAAQFQMKYLGEAQYVRIQIIRDHKNKSLTLSQATCINKMLIRYSMQSSKNGLLPFRHGVHLSKEQCPKTSKEVEDIR
        LYVDDILLIRNDVGYLTDVKTLLAAQFQMKYLGEAQYV IQIIRDHKNK+LTLSQATCINKMLIRYSMQSSKNGLLPFRHGVHLSKEQCPKT KEVEDIR
Subjt:  LYVDDILLIRNDVGYLTDVKTLLAAQFQMKYLGEAQYVRIQIIRDHKNKSLTLSQATCINKMLIRYSMQSSKNGLLPFRHGVHLSKEQCPKTSKEVEDIR

Query:  RIPYASTVGNLMYAMLCTRPDICYAVGIVSKYQSNLGLDHWTTVKIIIKYLRRIRDYMLVYGGKDLILTRYTDPDFQTDKDSKKSTSGSMFILNGGVVVW
        RIPYASTVGNLMYAMLCTRPDICYAVGIVSKYQSNLGLDHWTTVKIIIKYLRRIRDYMLVYGGKDLILTRYTDPDFQTDKDSKKSTSGSMFILNGGVVVW
Subjt:  RIPYASTVGNLMYAMLCTRPDICYAVGIVSKYQSNLGLDHWTTVKIIIKYLRRIRDYMLVYGGKDLILTRYTDPDFQTDKDSKKSTSGSMFILNGGVVVW

Query:  CSIKQGCIVDSTMEAGYVVAKEAIWLRKFLLDFEVVPNMNLPITLYSDNSGTVANSKEPHSHKRGKDIERKYHLIQEIVQRGDVIVTKITSEHNITDPFT
        CSIKQGCIVDSTMEAGYVVAKEAIWLRKFLLDFEVVPNMNLPITLYSDNSGTVANSKEPHSHKRGKDI+RKYHLIQEIVQRGDVIVTKITSEHNITDPFT
Subjt:  CSIKQGCIVDSTMEAGYVVAKEAIWLRKFLLDFEVVPNMNLPITLYSDNSGTVANSKEPHSHKRGKDIERKYHLIQEIVQRGDVIVTKITSEHNITDPFT

Query:  KTLTTKVFEGHLESLGPRDMYIK
        KTLTTKVFEGHLESLG RDMYIK
Subjt:  KTLTTKVFEGHLESLGPRDMYIK

A0A5D3BCQ5 Gag/pol protein

6.6e-198

82.49

Show/hide

Query:  MLKSIRILLSIATFYDYEIWQKDVKTAFLNGNLEKCIFMSQLEGFITQGQEQKVCKLNRSIHELKQASKFWNIIFDTAIKSYNFDQNVDEPCAYKKINKG
        MLKSIRILLSIATFYDYEIWQ DVKTAF NGNLE+ IFMSQLEGFITQGQ+QKVCKLNRSI+ LKQ S+ WNI FDTAIKSY FDQNVDEPC YKKINKG
Subjt:  MLKSIRILLSIATFYDYEIWQKDVKTAFLNGNLEKCIFMSQLEGFITQGQEQKVCKLNRSIHELKQASKFWNIIFDTAIKSYNFDQNVDEPCAYKKINKG

Query:  KVAFLVLYVDDILLIRNDVGYLTDVKTLLAAQFQMKYLGEAQYV-RIQIIRDHKNKSLTLSQATCINKMLIRYSMQSSKNGLLPFRHGVHLSKEQCPKTS
        KVAFLVLYVDDILLI NDVGYL D+K  LA QFQMK L EAQYV  IQIIRDHKNK+L LSQAT INKML+RYSMQ+SK GLLPFRHGVHLSKEQCPKT 
Subjt:  KVAFLVLYVDDILLIRNDVGYLTDVKTLLAAQFQMKYLGEAQYV-RIQIIRDHKNKSLTLSQATCINKMLIRYSMQSSKNGLLPFRHGVHLSKEQCPKTS

Query:  KEVEDIRRIPYASTVGNLMYAMLCTRPDICYAVGIVSKYQSNLGLDHWTTVKIIIKYLRRIRDYMLVYGGKDLILTRYTDPDFQTDKDSKKSTSGSMFIL
        +EVED+R IPYAS V +L+Y MLCTRPDICY VGIV++YQSN GLDHWT VKII+KYLRR RDYMLVYG KDLILT YTD DFQTDKDS+KSTS S+F L
Subjt:  KEVEDIRRIPYASTVGNLMYAMLCTRPDICYAVGIVSKYQSNLGLDHWTTVKIIIKYLRRIRDYMLVYGGKDLILTRYTDPDFQTDKDSKKSTSGSMFIL

Query:  NGGVVVWCSIKQGCIVDSTMEAGYV----VAKEAIWLRKFLLDFEVVPNMNLPITLYSDNSGTVANSKEPHSHKRGKDIERKYHLIQEIVQRGDVIVTKI
        NGG VVW SIKQGCIVDST+E  YV     AK+A WLRKFL D EVVPNMNLPITLY DNSGTVANSKEP SHKRGK IERKYHLI+EIVQR DVIVTKI
Subjt:  NGGVVVWCSIKQGCIVDSTMEAGYV----VAKEAIWLRKFLLDFEVVPNMNLPITLYSDNSGTVANSKEPHSHKRGKDIERKYHLIQEIVQRGDVIVTKI

Query:  TSEHNITDPFTKTLTTKVFEGHLESLGPRDMYIK
         SEHNI DPFTKTLT KVFEGHLESLG RDMYI+
Subjt:  TSEHNITDPFTKTLTTKVFEGHLESLGPRDMYIK

SwissProt top hits

e value

%identity

Alignment

P04146 Copia protein

6.6e-54

31.21

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Query:  LKSIRILLSIATFYDYEIWQKDVKTAFLNGNLEKCIFMSQLEGFITQGQEQKVCKLNRSIHELKQASKFWNIIFDTAIKSYNFDQNVDEPCAY--KKINK
        + S R +LS+   Y+ ++ Q DVKTAFLNG L++ I+M   +G         VCKLN++I+ LKQA++ W  +F+ A+K   F  +  + C Y   K N 
Subjt:  LKSIRILLSIATFYDYEIWQKDVKTAFLNGNLEKCIFMSQLEGFITQGQEQKVCKLNRSIHELKQASKFWNIIFDTAIKSYNFDQNVDEPCAY--KKINK

Query:  GKVAFLVLYVDDILLIRNDVGYLTDVKTLLAAQFQMKYLGEAQY---VRIQIIRDHKNKSLTLSQATCINKMLIRYSMQSSKNGLLPFRHGVHL----SK
         +  +++LYVDD+++   D+  + + K  L  +F+M  L E ++   +RI++  D     + LSQ+  + K+L +++M++      P    ++     S 
Subjt:  GKVAFLVLYVDDILLIRNDVGYLTDVKTLLAAQFQMKYLGEAQY---VRIQIIRDHKNKSLTLSQATCINKMLIRYSMQSSKNGLLPFRHGVHL----SK

Query:  EQCPKTSKEVEDIRRIPYASTVGNLMYAMLCTRPDICYAVGIVSKYQSNLGLDHWTTVKIIIKYLRRIRDYMLVYGGKDLI----LTRYTDPDFQTDKDS
        E C             P  S +G LMY MLCTRPD+  AV I+S+Y S    + W  +K +++YL+   D  L++  K+L     +  Y D D+   +  
Subjt:  EQCPKTSKEVEDIRRIPYASTVGNLMYAMLCTRPDICYAVGIVSKYQSNLGLDHWTTVKIIIKYLRRIRDYMLVYGGKDLI----LTRYTDPDFQTDKDS

Query:  KKSTSGSMF-ILNGGVVVWCSIKQGCIVDSTMEAGYV----VAKEAIWLRKFLLDFEVVPNMNLPITLYSDNSGTVANSKEPHSHKRGKDIERKYHLIQE
        +KST+G +F + +  ++ W + +Q  +  S+ EA Y+      +EA+WL+  L    +   +  PI +Y DN G ++ +  P  HKR K I+ KYH  +E
Subjt:  KKSTSGSMF-ILNGGVVVWCSIKQGCIVDSTMEAGYV----VAKEAIWLRKFLLDFEVVPNMNLPITLYSDNSGTVANSKEPHSHKRGKDIERKYHLIQE

Query:  IVQRGDVIVTKITSEHNITDPFTKTLTTKVFEGHLESLG
         VQ   + +  I +E+ + D FTK L    F    + LG
Subjt:  IVQRGDVIVTKITSEHNITDPFTKTLTTKVFEGHLESLG

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94

2.8e-84

40.28

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Query:  LKSIRILLSIATFYDYEIWQKDVKTAFLNGNLEKCIFMSQLEGFITQGQEQKVCKLNRSIHELKQASKFWNIIFDTAIKSYNFDQNVDEPCAY-KKINKG
        + SIR +LS+A   D E+ Q DVKTAFL+G+LE+ I+M Q EGF   G++  VCKLN+S++ LKQA + W + FD+ +KS  + +   +PC Y K+ ++ 
Subjt:  LKSIRILLSIATFYDYEIWQKDVKTAFLNGNLEKCIFMSQLEGFITQGQEQKVCKLNRSIHELKQASKFWNIIFDTAIKSYNFDQNVDEPCAY-KKINKG

Query:  KVAFLVLYVDDILLIRNDVGYLTDVKTLLAAQFQMKYLGEAQYV-RIQIIRDHKNKSLTLSQATCINKMLIRYSMQSSKNGLLPFRHGVHLSKEQCPKTS
            L+LYVDD+L++  D G +  +K  L+  F MK LG AQ +  ++I+R+  ++ L LSQ   I ++L R++M+++K    P    + LSK+ CP T 
Subjt:  KVAFLVLYVDDILLIRNDVGYLTDVKTLLAAQFQMKYLGEAQYV-RIQIIRDHKNKSLTLSQATCINKMLIRYSMQSSKNGLLPFRHGVHLSKEQCPKTS

Query:  KEVEDIRRIPYASTVGNLMYAMLCTRPDICYAVGIVSKYQSNLGLDHWTTVKIIIKYLRRIRDYMLVYGGKDLILTRYTDPDFQTDKDSKKSTSGSMFIL
        +E  ++ ++PY+S VG+LMYAM+CTRPDI +AVG+VS++  N G +HW  VK I++YLR      L +GG D IL  YTD D   D D++KS++G +F  
Subjt:  KEVEDIRRIPYASTVGNLMYAMLCTRPDICYAVGIVSKYQSNLGLDHWTTVKIIIKYLRRIRDYMLVYGGKDLILTRYTDPDFQTDKDSKKSTSGSMFIL

Query:  NGGVVVWCSIKQGCIVDSTMEAGYVVA----KEAIWLRKFLLDFEVVPNMNLPITLYSDNSGTVANSKEPHSHKRGKDIERKYHLIQEIVQRGDVIVTKI
        +GG + W S  Q C+  ST EA Y+ A    KE IWL++FL +  +         +Y D+   +  SK    H R K I+ +YH I+E+V    + V KI
Subjt:  NGGVVVWCSIKQGCIVDSTMEAGYVVA----KEAIWLRKFLLDFEVVPNMNLPITLYSDNSGTVANSKEPHSHKRGKDIERKYHLIQEIVQRGDVIVTKI

Query:  TSEHNITDPFTKTLTTKVFEGHLESLG
        ++  N  D  TK +    FE   E +G
Subjt:  TSEHNITDPFTKTLTTKVFEGHLESLG

P25600 Putative transposon Ty5-1 protein YCL074W

6.9e-27

29.68

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Query:  DVKTAFLNGNLEKCIFMSQLEGFITQGQEQKVCKLNRSIHELKQASKFWNIIFDTAIKSYNFDQNVDEPCAYKKINKGKVAFLVLYVDDILLIRNDVGYL
        DV TAFLN  +++ I++ Q  GF+ +     V +L   ++ LKQA   WN   +  +K   F ++  E   Y +       ++ +YVDD+L+        
Subjt:  DVKTAFLNGNLEKCIFMSQLEGFITQGQEQKVCKLNRSIHELKQASKFWNIIFDTAIKSYNFDQNVDEPCAYKKINKGKVAFLVLYVDDILLIRNDVGYL

Query:  TDVKTLLAAQFQMKYLGEAQYVRIQIIRDHKNKSLTLSQATCINKMLIRYSMQSSKNGLLPFRHGVHLSKEQCPKTSKEVEDIRRIPYASTVGNLMYAML
          VK  L   + MK LG+        I    N  +TLS    I K      + + K    P  +    SK     TS  ++DI   PY S VG L++   
Subjt:  TDVKTLLAAQFQMKYLGEAQYVRIQIIRDHKNKSLTLSQATCINKMLIRYSMQSSKNGLLPFRHGVHLSKEQCPKTSKEVEDIRRIPYASTVGNLMYAML

Query:  CTRPDICYAVGIVSKYQSNLGLDHWTTVKIIIKYLRRIRDYMLVY-GGKDLILTRYTDPDFQTDKDSKKSTSGSMFILNGGVVVWCSIK-QGCIVDSTME
          RPDI Y V ++S++       H  + + +++YL   R   L Y  G  L LT Y D       D   ST G + +L G  V W S K +G I   + E
Subjt:  CTRPDICYAVGIVSKYQSNLGLDHWTTVKIIIKYLRRIRDYMLVY-GGKDLILTRYTDPDFQTDKDSKKSTSGSMFILNGGVVVWCSIK-QGCIVDSTME

Query:  AGYVVAKEAI
        A Y+ A E +
Subjt:  AGYVVAKEAI

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1

4.5e-42

30.19

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Query:  SIRILLSIATFYDYEIWQKDVKTAFLNGNLEKCIFMSQLEGFITQGQEQKVCKLNRSIHELKQASKFWNIIFDTAIKSYNFDQNVDEPCAYKKINKGKVA
        SIRI+L +A    + I Q DV  AFL G L   ++MSQ  GFI + +   VCKL ++++ LKQA + W +     + +  F  +V +   +       + 
Subjt:  SIRILLSIATFYDYEIWQKDVKTAFLNGNLEKCIFMSQLEGFITQGQEQKVCKLNRSIHELKQASKFWNIIFDTAIKSYNFDQNVDEPCAYKKINKGKVA

Query:  FLVLYVDDILLIRNDVGYLTDVKTLLAAQFQMKYLGEAQYVRIQIIRDHKNKSLTLSQATCINKMLIRYSMQSSKNGLLPFRHGVHLSKEQCPKTSKEVE
        ++++YVDDIL+  ND   L +    L+ +F +K   E  Y  + I        L LSQ   I  +L R +M ++K    P      LS     K +   E
Subjt:  FLVLYVDDILLIRNDVGYLTDVKTLLAAQFQMKYLGEAQYVRIQIIRDHKNKSLTLSQATCINKMLIRYSMQSSKNGLLPFRHGVHLSKEQCPKTSKEVE

Query:  DIRRIPYASTVGNLMYAMLCTRPDICYAVGIVSKYQSNLGLDHWTTVKIIIKYLRRIRDY-MLVYGGKDLILTRYTDPDFQTDKDSKKSTSGSMFILNGG
              Y   VG+L Y +  TRPDI YAV  +S++      +H   +K I++YL    ++ + +  G  L L  Y+D D+  DKD   ST+G +  L   
Subjt:  DIRRIPYASTVGNLMYAMLCTRPDICYAVGIVSKYQSNLGLDHWTTVKIIIKYLRRIRDY-MLVYGGKDLILTRYTDPDFQTDKDSKKSTSGSMFILNGG

Query:  VVVWCSIKQGCIVDSTMEAGY----VVAKEAIWLRKFLLDFEVVPNMNLPITLYSDNSGTVANSKEPHSHKRGKDIERKYHLIQEIVQRGDVIVTKITSE
         + W S KQ  +V S+ EA Y      + E  W+   L +  +   +  P  +Y DN G       P  H R K I   YH I+  VQ G + V  +++ 
Subjt:  VVVWCSIKQGCIVDSTMEAGY----VVAKEAIWLRKFLLDFEVVPNMNLPITLYSDNSGTVANSKEPHSHKRGKDIERKYHLIQEIVQRGDVIVTKITSE

Query:  HNITDPFTKTLTTKVFEGHLESLG
          + D  TK L+   F+     +G
Subjt:  HNITDPFTKTLTTKVFEGHLESLG

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2

2.4e-43

29.48

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Query:  SIRILLSIATFYDYEIWQKDVKTAFLNGNLEKCIFMSQLEGFITQGQEQKVCKLNRSIHELKQASKFWNIIFDTAIKSYNFDQNVDEPCAYKKINKGKVA
        SIRI+L +A    + I Q DV  AFL G L   ++MSQ  GF+ + +   VC+L ++I+ LKQA + W +   T + +  F  ++ +   +       + 
Subjt:  SIRILLSIATFYDYEIWQKDVKTAFLNGNLEKCIFMSQLEGFITQGQEQKVCKLNRSIHELKQASKFWNIIFDTAIKSYNFDQNVDEPCAYKKINKGKVA

Query:  FLVLYVDDILLIRNDVGYLTDVKTLLAAQFQMKYLGEAQYVRIQIIRDHKNKSLTLSQATCINKMLIRYSMQSSKNGLLPFRHGVHLSKEQCPKTSKEVE
        ++++YVDDIL+  ND   L      L+ +F +K   +  Y  + I      + L LSQ      +L R +M ++K    P      L+     K     E
Subjt:  FLVLYVDDILLIRNDVGYLTDVKTLLAAQFQMKYLGEAQYVRIQIIRDHKNKSLTLSQATCINKMLIRYSMQSSKNGLLPFRHGVHLSKEQCPKTSKEVE

Query:  DIRRIPYASTVGNLMYAMLCTRPDICYAVGIVSKYQSNLGLDHWTTVKIIIKYLRRIRDY-MLVYGGKDLILTRYTDPDFQTDKDSKKSTSGSMFILNGG
              Y   VG+L Y +  TRPD+ YAV  +S+Y      DHW  +K +++YL    D+ + +  G  L L  Y+D D+  D D   ST+G +  L   
Subjt:  DIRRIPYASTVGNLMYAMLCTRPDICYAVGIVSKYQSNLGLDHWTTVKIIIKYLRRIRDY-MLVYGGKDLILTRYTDPDFQTDKDSKKSTSGSMFILNGG

Query:  VVVWCSIKQGCIVDSTMEAGY----VVAKEAIWLRKFLLDFEVVPNMNLPITLYSDNSGTVANSKEPHSHKRGKDIERKYHLIQEIVQRGDVIVTKITSE
         + W S KQ  +V S+ EA Y      + E  W+   L +  +   ++ P  +Y DN G       P  H R K I   YH I+  VQ G + V  +++ 
Subjt:  VVVWCSIKQGCIVDSTMEAGY----VVAKEAIWLRKFLLDFEVVPNMNLPITLYSDNSGTVANSKEPHSHKRGKDIERKYHLIQEIVQRGDVIVTKITSE

Query:  HNITDPFTKTLTTKVFEGHLESLG
          + D  TK L+   F+     +G
Subjt:  HNITDPFTKTLTTKVFEGHLESLG

Arabidopsis top hits

e value

%identity

Alignment

AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8

2.4e-35

27.3

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Query:  LKSIRILLSIATFYDYEIWQKDVKTAFLNGNLEKCIFMSQLEGFIT-QGQE---QKVCKLNRSIHELKQASKFWNIIFDTAIKSYNFDQNVDEPCAYKKI
        L S++++L+I+  Y++ + Q D+  AFLNG+L++ I+M    G+   QG       VC L +SI+ LKQAS+ W + F   +  + F Q+  +   + KI
Subjt:  LKSIRILLSIATFYDYEIWQKDVKTAFLNGNLEKCIFMSQLEGFIT-QGQE---QKVCKLNRSIHELKQASKFWNIIFDTAIKSYNFDQNVDEPCAYKKI

Query:  NKGKVAFLVLYVDDILLIRNDVGYLTDVKTLLAAQFQMKYLGEAQY-VRIQIIRDHKNKSLTLSQATCINKMLIRYSMQSSKNGLLPFRHGVHLSKEQCP
               +++YVDDI++  N+   + ++K+ L + F+++ LG  +Y + ++I R      + + Q      +L    +   K   +P    V  S     
Subjt:  NKGKVAFLVLYVDDILLIRNDVGYLTDVKTLLAAQFQMKYLGEAQY-VRIQIIRDHKNKSLTLSQATCINKMLIRYSMQSSKNGLLPFRHGVHLSKEQCP

Query:  KTSKEVEDIRRIPYASTVGNLMYAMLCTRPDICYAVGIVSKYQSNLGLDHWTTVKIIIKYLRRIRDYMLVYGGK-DLILTRYTDPDFQTDKDSKKSTSGS
         +  +  D +   Y   +G LMY  + TR DI +AV  +S++     L H   V  I+ Y++      L Y  + ++ L  ++D  FQ+ KD+++ST+G 
Subjt:  KTSKEVEDIRRIPYASTVGNLMYAMLCTRPDICYAVGIVSKYQSNLGLDHWTTVKIIIKYLRRIRDYMLVYGGK-DLILTRYTDPDFQTDKDSKKSTSGS

Query:  MFILNGGVVVWCSIKQGCIVDSTMEAGY----VVAKEAIWLRKFLLDFEVVPNMNLPITLYSDNSGTVANSKEPHSHKRGKDIERKYHLIQE
           L   ++ W S KQ  +  S+ EA Y        E +WL +F  + ++   ++ P  L+ DN+  +  +     H+R K IE   H ++E
Subjt:  MFILNGGVVVWCSIKQGCIVDSTMEAGY----VVAKEAIWLRKFLLDFEVVPNMNLPITLYSDNSGTVANSKEPHSHKRGKDIERKYHLIQE

ATMG00810.1 DNA/RNA polymerases superfamily protein

1.3e-12

28.09

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Query:  FLVLYVDDILLIRNDVGYLTDVKTLLAAQFQMKYLGEAQYVRIQIIRDHKNKSLTLSQATCINKMLIRYSMQSSK--NGLLPFRHGVHLSKEQCPKTSKE
        +L+LYVDDILL  +    L  +   L++ F MK LG   Y     I+ H +  L LSQ     ++L    M   K  +  LP +    +S  + P  S  
Subjt:  FLVLYVDDILLIRNDVGYLTDVKTLLAAQFQMKYLGEAQYVRIQIIRDHKNKSLTLSQATCINKMLIRYSMQSSK--NGLLPFRHGVHLSKEQCPKTSKE

Query:  VEDIRRIPYASTVGNLMYAMLCTRPDICYAVGIVSKYQSNLGLDHWTTVKIIIKYLR-RIRDYMLVYGGKDLILTRYTDPDFQTDKDSKKSTSGSMFILN
                + S VG L Y  L TRPDI YAV IV +      L  +  +K +++Y++  I   + ++    L +  + D D+     +++ST+G    L 
Subjt:  VEDIRRIPYASTVGNLMYAMLCTRPDICYAVGIVSKYQSNLGLDHWTTVKIIIKYLR-RIRDYMLVYGGKDLILTRYTDPDFQTDKDSKKSTSGSMFILN

Query:  GGVVVWCSIKQGCIVDSTMEAGY----VVAKEAIW
          ++ W + +Q  +  S+ E  Y    + A E  W
Subjt:  GGVVVWCSIKQGCIVDSTMEAGY----VVAKEAIW

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTTAAAGTCCATAAGGATTCTCTTGTCCATAGCCACATTTTATGATTATGAAATATGGCAAAAGGATGTCAAGACTGCTTTTCTAAATGGCAATCTTGAAAAG
TGTATCTTTATGTCTCAGCTCGAGGGGTTCATAACCCAAGGTCAGGAGCAAAAAGTTTGCAAGCTGAATCGATCCATTCATGAATTGAAACAAGCATCTAAATTT
TGGAACATTATATTTGATACTGCAATCAAATCTTACAATTTTGACCAAAACGTTGATGAACCTTGTGCATACAAGAAAATCAACAAAGGTAAAGTAGCTTTCTTA
GTACTTTATGTGGACGATATCCTCCTTATTAGGAATGATGTGGGATACCTAACTGACGTTAAAACTTTGCTAGCAGCCCAATTCCAAATGAAATATTTGGGAGAG
GCACAATATGTTAGGATCCAAATCATAAGGGATCATAAGAATAAATCGCTAACACTATCTCAAGCAACCTGTATCAACAAAATGTTGATTCGATATTCGATGCAA
AGCTCTAAGAATGGTTTATTACCTTTCAGGCATGGGGTTCACTTGTCTAAGGAACAGTGTCCTAAGACATCTAAAGAAGTTGAGGATATAAGACGTATTCCCTAT
GCCTCAACTGTGGGTAACCTAATGTATGCTATGCTCTGCACTAGACCAGATATTTGTTATGCAGTGGGAATAGTCAGTAAGTATCAGTCGAACCTAGGGTTAGAC
CACTGGACGACAGTTAAAATTATTATTAAGTATCTTAGAAGAATAAGAGACTACATGCTTGTGTATGGAGGTAAGGATTTGATCCTTACAAGATACACTGACCCT
GATTTCCAAACCGATAAGGATTCTAAGAAATCCACGTCGGGATCAATGTTCATTCTGAATGGAGGAGTTGTAGTATGGTGTAGCATCAAGCAAGGATGCATTGTA
GACTCTACTATGGAGGCTGGGTACGTCGTAGCAAAAGAAGCAATTTGGCTCAGGAAGTTCCTACTTGATTTTGAAGTTGTTCCAAATATGAACTTACCCATCACT
CTATATTCTGATAACAGTGGGACAGTAGCCAATTCTAAAGAACCTCACAGCCACAAACGAGGGAAAGACATAGAGAGGAAGTATCACCTGATACAGGAGATTGTG
CAACGAGGGGATGTGATCGTCACCAAGATCACCTCAGAGCACAACATTACCGATCCATTTACGAAGACTCTCACGACTAAAGTGTTCGAGGGTCATCTAGAAAGT
CTAGGTCCTCGAGATATGTACATTAAGTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MLKSIRILLSIATFYDYEIWQKDVKTAFLNGNLEKCIFMSQLEGFITQGQEQKVCKLNRSIHELKQASKFWNIIFDTAIKSYNFDQNVDEPCAYKKINKGKVAFL
VLYVDDILLIRNDVGYLTDVKTLLAAQFQMKYLGEAQYVRIQIIRDHKNKSLTLSQATCINKMLIRYSMQSSKNGLLPFRHGVHLSKEQCPKTSKEVEDIRRIPY
ASTVGNLMYAMLCTRPDICYAVGIVSKYQSNLGLDHWTTVKIIIKYLRRIRDYMLVYGGKDLILTRYTDPDFQTDKDSKKSTSGSMFILNGGVVVWCSIKQGCIV
DSTMEAGYVVAKEAIWLRKFLLDFEVVPNMNLPITLYSDNSGTVANSKEPHSHKRGKDIERKYHLIQEIVQRGDVIVTKITSEHNITDPFTKTLTTKVFEGHLES
LGPRDMYIK

Cmc07g0196021 (gene) of Melon (Charmono) v1.1 genome